PLXDC1 (plexin domain containing 1)

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Gene: PLXDC1 (plexin domain containing 1) Sus scrofa

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Symbol:

PLXDC1

Name:

plexin domain containing 1

RGD ID:

14008134

Description:

INVOLVED IN spinal cord development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); INTERACTS WITH deoxynivalenol; zearalenone

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

plexin domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	23,073,302 - 23,142,547 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	23,073,292 - 23,142,529 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	23,526,506 - 23,586,867 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hepatocellular carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

zearalenone (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

spinal cord development (ISO)

Cellular Component

cytoplasm (IEA)

dendrite (ISO)

membrane (IEA)

neuronal cell body (ISO)

plasma membrane (IEA)

receptor complex (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712

Genomics

Comparative Map Data

PLXDC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	23,073,302 - 23,142,547 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	23,073,292 - 23,142,529 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	23,526,506 - 23,586,867 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLXDC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	39,063,313 - 39,152,967 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	39,063,313 - 39,154,394 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	37,219,566 - 37,307,890 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	34,473,082 - 34,561,298 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	34,473,082 - 34,561,298	NCBI
Celera	17	33,880,385 - 33,968,781 (-)	NCBI		Celera
Cytogenetic Map	17	q12	NCBI
HuRef	17	33,015,096 - 33,103,405 (-)	NCBI		HuRef
CHM1_1	17	37,455,276 - 37,544,219 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	39,927,167 - 40,015,495 (-)	NCBI		T2T-CHM13v2.0

Plxdc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	97,814,063 - 97,879,393 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	97,814,064 - 97,877,270 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	97,923,237 - 97,986,669 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	97,923,238 - 97,986,444 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	97,784,551 - 97,847,760 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	97,739,328 - 97,802,470 (-)	NCBI		MGSCv36	mm8
Celera	11	107,572,091 - 107,636,900 (-)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	61.31	NCBI

Plxdc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	83,418,837 - 83,478,451 (-)	NCBI		GRCr8
mRatBN7.2	10	82,922,499 - 82,982,124 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	82,922,508 - 82,982,130 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	87,871,087 - 87,930,400 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	87,369,172 - 87,428,484 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	82,761,777 - 82,821,103 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	85,871,122 - 85,938,085 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	85,871,122 - 85,938,085 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	85,657,448 - 85,726,578 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	86,688,500 - 86,748,229 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	86,704,112 - 86,762,473 (-)	NCBI
Celera	10	81,675,768 - 81,735,367 (-)	NCBI		Celera
Cytogenetic Map	10	q31	NCBI

Plxdc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	13,982,443 - 14,028,235 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	13,982,443 - 14,028,235 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLXDC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	25,784,725 - 25,871,863 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	27,680,038 - 27,765,993 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	18,117,840 - 18,208,788 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	18,394,743 - 18,484,094 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	18,395,119 - 18,484,094 (+)	Ensembl	panpan1.1		panPan2

PLXDC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	23,210,930 - 23,272,242 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	23,210,925 - 23,270,995 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	22,682,401 - 22,743,725 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	24,005,250 - 24,066,630 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	24,004,567 - 24,066,635 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	22,777,111 - 22,838,666 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	23,038,178 - 23,099,338 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	23,163,352 - 23,224,700 (+)	NCBI		UU_Cfam_GSD_1.0

Plxdc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	22,641,852 - 22,705,140 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	14,370,795 - 14,424,209 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	14,370,767 - 14,425,608 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLXDC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	67,015,482 - 67,102,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	67,016,829 - 67,106,635 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	37,964,318 - 38,095,405 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plxdc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	3,757,668 - 3,792,506 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	3,756,641 - 3,793,006 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PLXDC1
2896 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021067057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021067058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP085518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01124019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000019064 ⟹ ENSSSCP00000018558

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	23,073,302 - 23,142,547 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000080918 ⟹ ENSSSCP00000067639

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	23,079,395 - 23,142,548 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000088785 ⟹ ENSSSCP00000067278

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	12	23,073,287 - 23,141,697 (+)	Ensembl

RefSeq Acc Id:

XM_021067057 ⟹ XP_020922716

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	23,073,292 - 23,142,529 (+)	NCBI

Sequence:

show sequence

CTCCCGGGTCCCGGCCCCGCGAGGCTGCTGCGCCCGCTCTCCGCCCGCTGGCTGGCGCTCGGCG
GCTCTCGCTGCTCGCGGGCCCCGCGATCCGCCGCCGCTCCGCCACCCACCCCTCCGCCTGCCAG
CCCCGGGGACCGCGCTCCCTAGCCCGGGCCGGGGGCAGCTGCGGGCCGGGGGCGGGTCCTGGCC
CCCACCATGCGGGCCGAGCTCTGGCTCCTCGTGCTGGTGTTCAGGGAGGCTGCCCGGGCGCTGA
GCCCCCCGCCTGGAGCAGGTCAGGATGCGGGCCGAGGCCCTGGATGGGCCACCAAGGGGATCAC
GCAGGGCTGGAATCGGAGAGCCGGAGGGAGCCCTGGCCAGGTGTCGGAGCCAGACAGGACCCAG
CTGAGCCAGGACCTGGGTGGGGGCACCCTGGCCATTGACACACGGCCGGAAAACGGGACCAGGG
TGGTGGAGGACAACCACAGCTACTATGTGTCTCATCTATACGGTCCCAGCGAGCCCCGCAGCCA
GGACCTGTGGGTGGACGTGGCCAAGGCCAACCAGAGCCAAGTGAAAGTTCACAGGATCCTCTCC
AACACCCACCGGCAGGCTTCAAGAGTGGTCCTGTCTTTTGATTTCCCTTTCTACGGGCATCCTC
TGCGGCAGATCACCATAGCAACCGGAGGCTTCATCTTCATGGGTGATGTGATCCATCGGATGCT
CACGGCTACTCAGTATGTGGCCCCTCTGATGGCCAACTTCAACCCCGGCTACTCCGACAACTCC
ACAGTTGCTTACTTTGACAACGGGACAGTCTTTGTGGTTCAGTGGGACCACGTCTACCTCCAGG
GCCGGGAGGACAGGGGCAGCTTCACCTTCCAGGCAGCTCTGCACCAAGACGGCCGCATTGTCTT
CGGCTACAGAGAGATCCCTATGTCTGTTCTGGAAATCAGCTCATCCCAGCACCCCGTCAAAGCA
GGCCTGTCAGATGCCTTCATGATTCTCAATCCATCCCCGGACGTCCCAGAATCTCGGCGAAGGA
CCATCTTCGAATATCACCGTGTGGAGCTGGACCCCAGCAAGATCACCAGCATGTCTGCCGTGGA
GTTCACCCCTTTGCCGACCTGCCTGCAGCATCAGAGCTGTGACGCCTGCATGTCCTCAGACCTG
ACCTTCAACTGCAGCTGGTGCCATGTCCTCCAGAGGTTTGTACCAGGATGCTCCAGTGGCTTTG
ACCGCTACCGCCAGGAGTGGCTGGCCTACGGCTGTGCCCAGGAGGCAGAGGGCAGGACGTGTGA
GGACTTCCAGGACGAGGACGCCTCATCCTCCCCCGACAGCTCCTTCAGCCCCTTTGACAGAGAC
CTCACCACCACTTCCTCCACCCTCTTTGTCGACAGCCTCACCACGGAAGATGACACCAAGTTGA
ATCCCTATGCAGGAGGAGAGGGCCTTCAGAACAACCTGTCCCCTGAGACCAAGGGCCCCCCCGT
GCACCTGGGCACCATCGTGGGCATCGTGCTGGCCGTCCTCCTTGTGGCAGCCATCATCCTGGCT
GGGATCTACATCAACGGCCACCCCACCTCCAACGCTGCCCTCTTCTTCATCGAGCGGAGACCGC
ACCACTGGCCTGCCATGAAGTTTCGAAACCACCCCAACCACTCCACCTACACAGAAGTCGAGCC
CTCGGGCCATGAGAAGGAGGGCTTTGTGGAGGCGGAGCAGTGCTGAGAGCTCCATTCTCCCTTG
GAAGCCTAGGAAGGAAGACCCGGGACCTCAAAAAACAGGAGTCAAAGCAAAGCAGAGAAGTAAC
TAATGTTCCTTGGCCTCCTCTGAACACAACCCGGATGGGAAGATGCGTCCAGAGCCCCCGTCTG
GCCGTCACATCCCGGAGGTCGAAGCAGAGGGCAGAAAAGCAGCCACGTTGAGTTTTTAAGGAAC
AGTAACCTAACTTCCCCCTGTTTAATGCCAGGGGTCTCCCCCTCTGAGTCTCTCAGTGGTCTCC
TCTGCAGCTGCCCCAGAGGTCCCCTCCCGCCTGCAGATGGCCAGACGCCCTGCCCGGGTCACCT
AGCACCCCTGCCTGTGACACGAGAGAACCAAGCTCTAGAATGGGGCTGCCGCATTCCAGGGTCC
ATAGACTCAGGAGCTGGTCCTCATGGCTATGGATTTGCTGTATTTTGCCCCGGCTTCTGTGCTC
TGGAAGTCTCTCCATCTGTATGGCTGCTCCCAGCCCTTTCGGCAAGTCGCTGACTGGCATGCTG
GCATCAGCAGAAAGCCAAATGGGAAGAGAGGAACGAACTTGTAGACAAATCACATTTTTAGGCT
TTGCTCCCTCAGCTTGCCCTTTCTGCCCAGAACCAGTACTTCTGCATCAAACCCGGGGGAAGCC
CATGCCTCGGGCTTTAGCCAACCGTGGCCCAGCCTGGGCCTGGCGAGCCGTGCTGTGCGCGGCC
ACCTCTACCGTGCAGGCTCTTCATCCTAGTGGCATATTTGGTGTCCCCTGTATTCACTGGCCTG
GTCTTCTGTCAGTGCCAGTAAATACCCCCAAGGGCAGGGCCTGCGGGATGAATATCTGTCCTCA
TCTGAGCTGGATTTTTATAGAGAGGGCTTCTTGAAACACACCCAACAGGGAACCTCAGTTAGAT
TCTGTTGAAAAGCAAAGCCTCCAGAATGACTGGGATGGAGGAAGCTGGTGCAGGAAGTAGGGAC
TTTAGACGCAAGACCTTGGCCTGGAGAGCTGCTCTGCCGGAAGTTCTTGGGGGCAGAGAGTTTA
GGCTTTCAAACTTAACCTGGAGGGAATGCTGTCCCTGGTTTGAAGGGATGGTTGGGGTTGCTTC
TGAAGAGCATTTCAAATGAAAACCTATAGTTTACCCTCATTCAAAGTAAAAAAAAAAAAAAAAA
AAAAAATAGCAGCAGCAAA

hide sequence

RefSeq Acc Id:

XM_021067058 ⟹ XP_020922717

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	23,073,292 - 23,142,529 (+)	NCBI

Sequence:

show sequence

CTCCCGGGTCCCGGCCCCGCGAGGCTGCTGCGCCCGCTCTCCGCCCGCTGGCTGGCGCTCGGCG
GCTCTCGCTGCTCGCGGGCCCCGCGATCCGCCGCCGCTCCGCCACCCACCCCTCCGCCTGCCAG
CCCCGGGGACCGCGCTCCCTAGCCCGGGCCGGGGGCAGCTGCGGGCCGGGGGCGGGTCCTGGCC
CCCACCATGCGGGCCGAGCTCTGGCTCCTCGTGCTGGTGTTCAGGGAGGCTGCCCGGGCGCTGA
GCCCCCCGCCTGGAGCAGGTCAGGATGCGGGCCGAGGCCCTGGATGGGCCACCAAGGGGATCAC
GCAGGGCTGGAATCGGAGAGCCGGAGGGAGCCCTGGCCAGGTGTCGGAGCCAGACAGGACCCAG
CTGAGCCAGGACCTGGGTGGGGGCACCCTGGCCATTGACACACGGCCGGAAAACGGGACCAGGG
TGGTGGAGGACAACCACAGCTACTATGTGTCTCATCTATACGGTCCCAGCGAGCCCCGCAGCCA
GGACCTGTGGGTGGACGTGGCCAAGGCCAACCAGAGCCAAGTGAAAGTTCACAGGATCCTCTCC
AACACCCACCGGCAGGCTTCAAGAGTGGTCCTGTCTTTTGATTTCCCTTTCTACGGGCATCCTC
TGCGGCAGATCACCATAGCAACCGGAGGCTTCATCTTCATGGGTGATGTGATCCATCGGATGCT
CACGGCTACTCAGTATGTGGCCCCTCTGATGGCCAACTTCAACCCCGGCTACTCCGACAACTCC
ACAGTTGCTTACTTTGACAACGGGACAGTCTTTGTGGTTCAGTGGGACCACGTCTACCTCCAGG
GCCGGGAGGACAGGGGCAGCTTCACCTTCCAGGCAGCTCTGCACCAAGACGGCCGCATTGTCTT
CGGCTACAGAGAGATCCCTATGTCTGTTCTGGAAATCAGCTCATCCCAGCACCCCGTCAAAGCA
GGCCTGTCAGATGCCTTCATGATTCTCAATCCATCCCCGGACGTCCCAGAATCTCGGCGAAGGA
CCATCTTCGAATATCACCGTGTGGAGCTGGACCCCAGCAAGATCACCAGCATGTCTGCCGTGGA
GTTCACCCCTTTGCCGACCTGCCTGCAGCATCAGAGCTGTGACGCCTGCATGTCCTCAGACCTG
ACCTTCAACTGCAGCTGGTGCCATGTCCTCCAGAGATGCTCCAGTGGCTTTGACCGCTACCGCC
AGGAGTGGCTGGCCTACGGCTGTGCCCAGGAGGCAGAGGGCAGGACGTGTGAGGACTTCCAGGA
CGAGGACGCCTCATCCTCCCCCGACAGCTCCTTCAGCCCCTTTGACAGAGACCTCACCACCACT
TCCTCCACCCTCTTTGTCGACAGCCTCACCACGGAAGATGACACCAAGTTGAATCCCTATGCAG
GAGGAGAGGGCCTTCAGAACAACCTGTCCCCTGAGACCAAGGGCCCCCCCGTGCACCTGGGCAC
CATCGTGGGCATCGTGCTGGCCGTCCTCCTTGTGGCAGCCATCATCCTGGCTGGGATCTACATC
AACGGCCACCCCACCTCCAACGCTGCCCTCTTCTTCATCGAGCGGAGACCGCACCACTGGCCTG
CCATGAAGTTTCGAAACCACCCCAACCACTCCACCTACACAGAAGTCGAGCCCTCGGGCCATGA
GAAGGAGGGCTTTGTGGAGGCGGAGCAGTGCTGAGAGCTCCATTCTCCCTTGGAAGCCTAGGAA
GGAAGACCCGGGACCTCAAAAAACAGGAGTCAAAGCAAAGCAGAGAAGTAACTAATGTTCCTTG
GCCTCCTCTGAACACAACCCGGATGGGAAGATGCGTCCAGAGCCCCCGTCTGGCCGTCACATCC
CGGAGGTCGAAGCAGAGGGCAGAAAAGCAGCCACGTTGAGTTTTTAAGGAACAGTAACCTAACT
TCCCCCTGTTTAATGCCAGGGGTCTCCCCCTCTGAGTCTCTCAGTGGTCTCCTCTGCAGCTGCC
CCAGAGGTCCCCTCCCGCCTGCAGATGGCCAGACGCCCTGCCCGGGTCACCTAGCACCCCTGCC
TGTGACACGAGAGAACCAAGCTCTAGAATGGGGCTGCCGCATTCCAGGGTCCATAGACTCAGGA
GCTGGTCCTCATGGCTATGGATTTGCTGTATTTTGCCCCGGCTTCTGTGCTCTGGAAGTCTCTC
CATCTGTATGGCTGCTCCCAGCCCTTTCGGCAAGTCGCTGACTGGCATGCTGGCATCAGCAGAA
AGCCAAATGGGAAGAGAGGAACGAACTTGTAGACAAATCACATTTTTAGGCTTTGCTCCCTCAG
CTTGCCCTTTCTGCCCAGAACCAGTACTTCTGCATCAAACCCGGGGGAAGCCCATGCCTCGGGC
TTTAGCCAACCGTGGCCCAGCCTGGGCCTGGCGAGCCGTGCTGTGCGCGGCCACCTCTACCGTG
CAGGCTCTTCATCCTAGTGGCATATTTGGTGTCCCCTGTATTCACTGGCCTGGTCTTCTGTCAG
TGCCAGTAAATACCCCCAAGGGCAGGGCCTGCGGGATGAATATCTGTCCTCATCTGAGCTGGAT
TTTTATAGAGAGGGCTTCTTGAAACACACCCAACAGGGAACCTCAGTTAGATTCTGTTGAAAAG
CAAAGCCTCCAGAATGACTGGGATGGAGGAAGCTGGTGCAGGAAGTAGGGACTTTAGACGCAAG
ACCTTGGCCTGGAGAGCTGCTCTGCCGGAAGTTCTTGGGGGCAGAGAGTTTAGGCTTTCAAACT
TAACCTGGAGGGAATGCTGTCCCTGGTTTGAAGGGATGGTTGGGGTTGCTTCTGAAGAGCATTT
CAAATGAAAACCTATAGTTTACCCTCATTCAAAGTAAAAAAAAAAAAAAAAAAAAAAATAGCAG
CAGCAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020922716	(Get FASTA)	NCBI Sequence Viewer
	XP_020922717	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000018558
	ENSSSCP00000018558.5
	ENSSSCP00015029707.1
	ENSSSCP00025028613.1
	ENSSSCP00030034914.1
	ENSSSCP00030034922.1
	ENSSSCP00035008556.1
	ENSSSCP00045047619.1
	ENSSSCP00050035361.1
	ENSSSCP00050035364.1
	ENSSSCP00055006601.1
	ENSSSCP00060032735.1
	ENSSSCP00070028820.1

RefSeq Acc Id:	XP_020922716 ⟸ XM_021067057
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1TKU2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRAELWLLVLVFREAARALSPPPGAGQDAGRGPGWATKGITQGWNRRAGGSPGQVSEPDRTQLS QDLGGGTLAIDTRPENGTRVVEDNHSYYVSHLYGPSEPRSQDLWVDVAKANQSQVKVHRILSNT HRQASRVVLSFDFPFYGHPLRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFNPGYSDNSTV AYFDNGTVFVVQWDHVYLQGREDRGSFTFQAALHQDGRIVFGYREIPMSVLEISSSQHPVKAGL SDAFMILNPSPDVPESRRRTIFEYHRVELDPSKITSMSAVEFTPLPTCLQHQSCDACMSSDLTF NCSWCHVLQRFVPGCSSGFDRYRQEWLAYGCAQEAEGRTCEDFQDEDASSSPDSSFSPFDRDLT TTSSTLFVDSLTTEDDTKLNPYAGGEGLQNNLSPETKGPPVHLGTIVGIVLAVLLVAAIILAGI YINGHPTSNAALFFIERRPHHWPAMKFRNHPNHSTYTEVEPSGHEKEGFVEAEQC hide sequence

RefSeq Acc Id:	XP_020922717 ⟸ XM_021067058
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1UKD0 (UniProtKB/TrEMBL), A0A480KTH7 (UniProtKB/TrEMBL), F1RWK7 (UniProtKB/TrEMBL), A0A8D1TKU2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRAELWLLVLVFREAARALSPPPGAGQDAGRGPGWATKGITQGWNRRAGGSPGQVSEPDRTQLS QDLGGGTLAIDTRPENGTRVVEDNHSYYVSHLYGPSEPRSQDLWVDVAKANQSQVKVHRILSNT HRQASRVVLSFDFPFYGHPLRQITIATGGFIFMGDVIHRMLTATQYVAPLMANFNPGYSDNSTV AYFDNGTVFVVQWDHVYLQGREDRGSFTFQAALHQDGRIVFGYREIPMSVLEISSSQHPVKAGL SDAFMILNPSPDVPESRRRTIFEYHRVELDPSKITSMSAVEFTPLPTCLQHQSCDACMSSDLTF NCSWCHVLQRCSSGFDRYRQEWLAYGCAQEAEGRTCEDFQDEDASSSPDSSFSPFDRDLTTTSS TLFVDSLTTEDDTKLNPYAGGEGLQNNLSPETKGPPVHLGTIVGIVLAVLLVAAIILAGIYING HPTSNAALFFIERRPHHWPAMKFRNHPNHSTYTEVEPSGHEKEGFVEAEQC hide sequence

Ensembl Acc Id:

ENSSSCP00000067278 ⟸ ENSSSCT00000088785

Ensembl Acc Id:

ENSSSCP00000018558 ⟸ ENSSSCT00000019064

Ensembl Acc Id:

ENSSSCP00000067639 ⟸ ENSSSCT00000080918

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000017511	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015055518	UniProtKB/TrEMBL
	ENSSSCG00025049140	UniProtKB/TrEMBL
	ENSSSCG00030054881	UniProtKB/TrEMBL
	ENSSSCG00035017911	UniProtKB/TrEMBL
	ENSSSCG00045038633	UniProtKB/TrEMBL
	ENSSSCG00050060480	UniProtKB/TrEMBL
	ENSSSCG00055004215	UniProtKB/TrEMBL
	ENSSSCG00060055582	UniProtKB/TrEMBL
	ENSSSCG00070017478	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000019064	ENTREZGENE
	ENSSSCT00000019064.5	UniProtKB/TrEMBL
	ENSSSCT00015074006.1	UniProtKB/TrEMBL
	ENSSSCT00025066908.1	UniProtKB/TrEMBL
	ENSSSCT00030076499.1	UniProtKB/TrEMBL
	ENSSSCT00030076524.1	UniProtKB/TrEMBL
	ENSSSCT00035023073.1	UniProtKB/TrEMBL
	ENSSSCT00045067055.1	UniProtKB/TrEMBL
	ENSSSCT00050082394.1	UniProtKB/TrEMBL
	ENSSSCT00050082400.1	UniProtKB/TrEMBL
	ENSSSCT00055008339.1	UniProtKB/TrEMBL
	ENSSSCT00060075740.1	UniProtKB/TrEMBL
	ENSSSCT00070034502.1	UniProtKB/TrEMBL
InterPro	Plexin_repeat	UniProtKB/TrEMBL
	PLXDC	UniProtKB/TrEMBL
NCBI Gene	PLXDC1	ENTREZGENE
PANTHER	PTHR13055	UniProtKB/TrEMBL
	PTHR13055:SF10	UniProtKB/TrEMBL
Pfam	PSI	UniProtKB/TrEMBL
UniProt	A0A480KTH7	ENTREZGENE
	A0A4X1UKD0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0XCT5_PIG	UniProtKB/TrEMBL
	A0A8D1TKU2	ENTREZGENE, UniProtKB/TrEMBL
	F1RWK7	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A480KTH7	UniProtKB/TrEMBL
VGNC ID	VGNC:91578	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD