ADAL (adenosine deaminase like) - Rat Genome Database

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Gene: ADAL (adenosine deaminase like) Sus scrofa
Analyze
Symbol: ADAL
Name: adenosine deaminase like
RGD ID: 13998148
Description: ENCODES a protein that exhibits adenosine deaminase activity (inferred); deaminase activity (inferred); gamma-tubulin binding (inferred); INVOLVED IN adenosine catabolic process (inferred); cytoplasmic microtubule organization (inferred); inosine biosynthetic process (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); cytoskeleton (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: adenosine deaminase-like protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1128,095,940 - 128,120,765 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11128,089,422 - 128,125,691 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21142,954,878 - 142,982,145 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:30032202  


Genomics

Comparative Map Data
ADAL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1128,095,940 - 128,120,765 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11128,089,422 - 128,125,691 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21142,954,878 - 142,982,145 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADAL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381543,330,351 - 43,354,569 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1543,330,672 - 43,354,569 (+)EnsemblGRCh38hg38GRCh38
GRCh371543,622,549 - 43,646,767 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361541,410,217 - 41,428,902 (+)NCBINCBI36Build 36hg18NCBI36
Celera1520,393,719 - 20,416,958 (+)NCBICelera
Cytogenetic Map15q15.3NCBI
HuRef1520,471,614 - 20,494,863 (+)NCBIHuRef
CHM1_11543,741,538 - 43,764,761 (+)NCBICHM1_1
T2T-CHM13v2.01541,137,658 - 41,161,894 (+)NCBIT2T-CHM13v2.0
Adal
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392120,970,525 - 120,989,921 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2120,970,909 - 120,987,161 (+)EnsemblGRCm39 Ensembl
GRCm382121,140,044 - 121,159,440 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2121,140,428 - 121,156,680 (+)EnsemblGRCm38mm10GRCm38
MGSCv372120,967,877 - 120,982,414 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362120,831,772 - 120,848,128 (+)NCBIMGSCv36mm8
Celera2122,294,038 - 122,308,746 (+)NCBICelera
Cytogenetic Map2E5NCBI
cM Map260.37NCBI
Adal
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83128,555,604 - 128,583,809 (+)NCBIGRCr8
mRatBN7.23108,101,857 - 108,119,557 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3108,098,346 - 108,130,565 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl3108,101,857 - 108,118,516 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3111,776,614 - 111,794,296 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03120,372,197 - 120,389,879 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03118,032,592 - 118,050,274 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03113,091,696 - 113,109,841 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3113,102,090 - 113,108,654 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03119,641,987 - 119,648,582 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43107,941,888 - 107,948,473 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13107,838,315 - 107,844,900 (+)NCBI
Celera3107,016,464 - 107,023,057 (+)NCBICelera
Cytogenetic Map3q35NCBI
Adal
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554169,898,339 - 9,913,427 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554169,892,422 - 9,913,877 (+)NCBIChiLan1.0ChiLan1.0
ADAL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21632,581,778 - 32,606,270 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11536,743,736 - 36,767,399 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01522,291,939 - 22,315,830 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11540,451,239 - 40,468,821 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1540,451,403 - 40,468,241 (+)Ensemblpanpan1.1panPan2
ADAL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13010,191,019 - 10,214,089 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3010,194,606 - 10,216,875 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3010,249,786 - 10,273,005 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03010,326,897 - 10,350,221 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3010,326,933 - 10,352,820 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13010,243,608 - 10,266,804 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03010,364,681 - 10,387,895 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03010,484,553 - 10,507,839 (+)NCBIUU_Cfam_GSD_1.0
Adal
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864088,653,726 - 88,693,793 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364716,501,891 - 6,524,141 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364716,501,887 - 6,541,796 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADAL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12639,648,164 - 39,669,734 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666048101,343,632 - 101,375,827 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adal
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480410,445,758 - 10,462,648 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480410,438,845 - 10,463,086 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ADAL
926 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1 1 2 7 3
Low 10 3 2 3 2 16 2 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000005202   ⟹   ENSSSCP00000005076
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1128,097,950 - 128,120,765 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000049753   ⟹   ENSSSCP00000035514
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1128,095,940 - 128,120,765 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000081611   ⟹   ENSSSCP00000071379
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1128,100,259 - 128,120,765 (-)Ensembl
RefSeq Acc Id: XM_005659689   ⟹   XP_005659746
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11128,089,422 - 128,125,646 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013993096   ⟹   XP_013848550
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11128,089,434 - 128,125,691 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013993097   ⟹   XP_013848551
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11128,089,434 - 128,125,691 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013993098   ⟹   XP_013848552
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11128,098,640 - 128,125,646 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013993099   ⟹   XP_013848553
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11128,098,255 - 128,120,766 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_005659746   ⟸   XM_005659689
- Peptide Label: isoform X1
- UniProtKB: F1SI59 (UniProtKB/TrEMBL),   A0A4X1V636 (UniProtKB/TrEMBL),   A0A4X1V6P8 (UniProtKB/TrEMBL),   A0A8D2C5I0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013848551   ⟸   XM_013993097
- Peptide Label: isoform X3
- UniProtKB: A0A4X1V6P8 (UniProtKB/TrEMBL),   A0A8D2C5I0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013848550   ⟸   XM_013993096
- Peptide Label: isoform X2
- UniProtKB: A0A286ZVJ6 (UniProtKB/TrEMBL),   A0A4X1V5J8 (UniProtKB/TrEMBL),   A0A4X1V6P8 (UniProtKB/TrEMBL),   A0A8D1V268 (UniProtKB/TrEMBL),   A0A8D2C5I0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013848553   ⟸   XM_013993099
- Peptide Label: isoform X4
- UniProtKB: A0A481B7B0 (UniProtKB/TrEMBL),   A0A5G2R2Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013848552   ⟸   XM_013993098
- Peptide Label: isoform X4
- UniProtKB: A0A481B7B0 (UniProtKB/TrEMBL),   A0A5G2R2Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000005076   ⟸   ENSSSCT00000005202
RefSeq Acc Id: ENSSSCP00000035514   ⟸   ENSSSCT00000049753
RefSeq Acc Id: ENSSSCP00000071379   ⟸   ENSSSCT00000081611
Protein Domains
Adenosine deaminase   Gamma tubulin complex component C-terminal   Gamma tubulin complex component protein N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000004710 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005020911 UniProtKB/TrEMBL
  ENSSSCG00015078372 UniProtKB/TrEMBL
  ENSSSCG00025075946 UniProtKB/TrEMBL
  ENSSSCG00030064627 UniProtKB/TrEMBL
  ENSSSCG00035020168 UniProtKB/TrEMBL
  ENSSSCG00040030607 UniProtKB/TrEMBL
  ENSSSCG00045035920 UniProtKB/TrEMBL
  ENSSSCG00050047643 UniProtKB/TrEMBL
  ENSSSCG00055018583 UniProtKB/TrEMBL
  ENSSSCG00060031648 UniProtKB/TrEMBL
  ENSSSCG00065034292 UniProtKB/TrEMBL
  ENSSSCG00070022001 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000005202 ENTREZGENE
  ENSSSCT00000005202.5 UniProtKB/TrEMBL
  ENSSSCT00000049753 ENTREZGENE
  ENSSSCT00000049753.3 UniProtKB/TrEMBL
  ENSSSCT00000081611 ENTREZGENE
  ENSSSCT00000081611.2 UniProtKB/TrEMBL
  ENSSSCT00005034104.1 UniProtKB/TrEMBL
  ENSSSCT00005034125.1 UniProtKB/TrEMBL
  ENSSSCT00015106139.1 UniProtKB/TrEMBL
  ENSSSCT00015106189.1 UniProtKB/TrEMBL
  ENSSSCT00025105115.1 UniProtKB/TrEMBL
  ENSSSCT00025105149.1 UniProtKB/TrEMBL
  ENSSSCT00030090317.1 UniProtKB/TrEMBL
  ENSSSCT00030090357.1 UniProtKB/TrEMBL
  ENSSSCT00030090419.1 UniProtKB/TrEMBL
  ENSSSCT00030090462.1 UniProtKB/TrEMBL
  ENSSSCT00035026205.1 UniProtKB/TrEMBL
  ENSSSCT00035026216.1 UniProtKB/TrEMBL
  ENSSSCT00040041140.1 UniProtKB/TrEMBL
  ENSSSCT00040041181.1 UniProtKB/TrEMBL
  ENSSSCT00045061959.1 UniProtKB/TrEMBL
  ENSSSCT00045062017.1 UniProtKB/TrEMBL
  ENSSSCT00050064900.1 UniProtKB/TrEMBL
  ENSSSCT00055036340.1 UniProtKB/TrEMBL
  ENSSSCT00055036448.1 UniProtKB/TrEMBL
  ENSSSCT00055036562.1 UniProtKB/TrEMBL
  ENSSSCT00060042854.1 UniProtKB/TrEMBL
  ENSSSCT00060042863.1 UniProtKB/TrEMBL
  ENSSSCT00065046808.1 UniProtKB/TrEMBL
  ENSSSCT00065046812.1 UniProtKB/TrEMBL
  ENSSSCT00070043781.1 UniProtKB/TrEMBL
  ENSSSCT00070043784.1 UniProtKB/TrEMBL
  ENSSSCT00070043790.1 UniProtKB/TrEMBL
  ENSSSCT00070043875.1 UniProtKB/TrEMBL
  ENSSSCT00070043879.1 UniProtKB/TrEMBL
  ENSSSCT00070043880.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1900 UniProtKB/TrEMBL
  Metal-dependent hydrolases UniProtKB/TrEMBL
InterPro A/AMP_deaminase_dom UniProtKB/TrEMBL
  Ado/ade_deaminase UniProtKB/TrEMBL
  GCP UniProtKB/TrEMBL
  GCP_C UniProtKB/TrEMBL
  GCP_C_sf UniProtKB/TrEMBL
  GCP_N UniProtKB/TrEMBL
  Metal_Hydrolase UniProtKB/TrEMBL
KEGG Report ssc:100155388 UniProtKB/TrEMBL
NCBI Gene ADAL ENTREZGENE
PANTHER ADENOSINE DEAMINASE-LIKE PROTEIN UniProtKB/TrEMBL
  GAMMA-TUBULIN COMPLEX COMPONENT 4 UniProtKB/TrEMBL
  PTHR11409 UniProtKB/TrEMBL
  PTHR19302 UniProtKB/TrEMBL
Pfam A_deaminase UniProtKB/TrEMBL
  GCP_C_terminal UniProtKB/TrEMBL
  GCP_N_terminal UniProtKB/TrEMBL
Superfamily-SCOP SSF51556 UniProtKB/TrEMBL
UniProt A0A286ZVJ6 ENTREZGENE, UniProtKB/TrEMBL
  A0A481B7B0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1V2T1_PIG UniProtKB/TrEMBL
  A0A4X1V5J8 ENTREZGENE
  A0A4X1V636 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1V6P8 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1V6X5_PIG UniProtKB/TrEMBL
  A0A4X1V6Y0_PIG UniProtKB/TrEMBL
  A0A5G2R2Q8 ENTREZGENE
  A0A8D1V268 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D2C5I0 ENTREZGENE, UniProtKB/TrEMBL
  F1SI59 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A4X1V5J8 UniProtKB/TrEMBL
  A0A5G2R2Q8 UniProtKB/TrEMBL
VGNC ID VGNC:85060 ENTREZGENE