Symbol:
REXO2
Name:
RNA exonuclease 2
RGD ID:
13982157
Description:
ENCODES a protein that exhibits 3'-5' exonuclease activity (inferred); 3'-5'-DNA exonuclease activity (inferred); 3'-5'-RNA exonuclease activity (inferred); INVOLVED IN nucleobase-containing compound metabolic process (ortholog); ASSOCIATED WITH chromosome 11 partial duplication syndrome (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (inferred); focal adhesion (inferred); mitochondrial intermembrane space (inferred); INTERACTS WITH deoxynivalenol
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
oligoribonuclease, mitochondrial
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 9 41,977,971 - 41,989,257 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 9 41,977,969 - 41,988,699 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 9 46,890,872 - 46,901,598 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
JBrowse:
View Region in Genome Browser (JBrowse)
Model
REXO2 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 9 41,977,971 - 41,989,257 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 9 41,977,969 - 41,988,699 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 9 46,890,872 - 46,901,598 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
REXO2 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 11 114,439,467 - 114,450,279 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 11 114,439,435 - 114,450,279 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 11 114,310,189 - 114,321,001 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 11 113,815,387 - 113,826,211 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 11 111,463,042 - 111,473,937 (+) NCBI Celera Cytogenetic Map 11 q23.2 NCBI HuRef 11 110,238,697 - 110,249,590 (+) NCBI HuRef CHM1_1 11 114,194,083 - 114,204,976 (+) NCBI CHM1_1 T2T-CHM13v2.0 11 114,449,884 - 114,460,696 (+) NCBI T2T-CHM13v2.0
Rexo2 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 9 48,379,812 - 48,391,911 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 9 48,379,812 - 48,391,923 (-) Ensembl GRCm39 Ensembl GRCm38 9 48,468,512 - 48,480,611 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 9 48,468,512 - 48,480,623 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 9 48,276,619 - 48,288,716 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 9 48,220,481 - 48,232,578 (-) NCBI MGSCv36 mm8 Celera 9 45,765,503 - 45,777,617 (-) NCBI Celera Cytogenetic Map 9 A5.3 NCBI cM Map 9 26.42 NCBI
Rexo2 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 8 57,708,420 - 57,720,142 (-) NCBI GRCr8 mRatBN7.2 8 48,811,900 - 48,823,622 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 8 48,811,900 - 48,823,622 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 8 54,312,591 - 54,324,283 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 8 52,591,423 - 52,603,115 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 8 50,455,692 - 50,467,384 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 8 52,802,604 - 52,814,321 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 8 52,802,595 - 52,814,321 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 8 51,395,455 - 51,407,172 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 8 51,748,875 - 51,760,597 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 8 51,767,930 - 51,779,651 (-) NCBI Celera 8 48,370,956 - 48,382,755 (-) NCBI Celera Cytogenetic Map 8 q23 NCBI
Rexo2 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955412 16,025,037 - 16,037,757 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955412 16,025,304 - 16,035,925 (+) NCBI ChiLan1.0 ChiLan1.0
REXO2 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 9 115,172,120 - 115,188,483 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 11 116,268,891 - 116,282,395 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 11 109,313,231 - 109,323,794 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 11 113,156,189 - 113,166,767 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 11 113,156,189 - 113,166,767 (+) Ensembl panpan1.1 panPan2
REXO2 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 18,919,283 - 18,929,899 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 18,919,286 - 18,930,378 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 18,844,854 - 18,855,230 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 18,867,066 - 18,877,457 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 18,867,066 - 18,877,552 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 19,005,645 - 19,016,034 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 18,906,965 - 18,917,344 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 18,951,639 - 18,962,034 (-) NCBI UU_Cfam_GSD_1.0
Rexo2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
REXO2 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 1 105,845,091 - 105,856,507 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 1 105,845,173 - 105,857,646 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666043 20,187,511 - 20,198,402 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Rexo2 (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
10
4
23
3
2
5
14
12
23
3
6
3
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSSSCT00000016422 ⟹ ENSSSCP00000015981
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 9 41,978,077 - 41,988,696 (+) Ensembl
Ensembl Acc Id:
ENSSSCT00000040955 ⟹ ENSSSCP00000031527
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 9 41,978,092 - 41,988,594 (+) Ensembl
Ensembl Acc Id:
ENSSSCT00000074044 ⟹ ENSSSCP00000072473
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 9 41,978,092 - 42,027,281 (+) Ensembl
Ensembl Acc Id:
ENSSSCT00000081559 ⟹ ENSSSCP00000069352
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 9 41,977,971 - 41,987,626 (+) Ensembl
Ensembl Acc Id:
ENSSSCT00000084632 ⟹ ENSSSCP00000069486
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 9 41,977,971 - 41,980,245 (+) Ensembl
Ensembl Acc Id:
ENSSSCT00000097541 ⟹ ENSSSCP00000080427
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 9 41,977,971 - 41,989,257 (+) Ensembl
RefSeq Acc Id:
XM_003129878 ⟹ XP_003129926
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 9 41,977,969 - 41,988,699 (+) NCBI
Sequence:
AACTAAGTCCGACTGTTCATGGCGAGCCGGCGCATTGGATGCTGGGACTAGTGGTTTTTGCTCCGGCGCTTCCCCGCGGGTTTGCGACGTTTAGCGACTATCGCGCCTGCGCCAGCGCCGGCTGAGAG GCTGGGGCCGTGGCGGCTCGTGCCGGGTGATGCTAGGCGGCTCCCTGGGTTGCAGGCTGTTGCGAGGTGTGGGTGGGACTCGCAGGCAGTTCGGGGCGCGGGGTGTCCGCGAAGGTGGCGCAGCCATG GCGGCGGGGGAGAGCATGGCTCAGCGGATGGTCTGGGTGGACCTGGAGATGACAGGATTGGACATTGAGAAGGACCAGATTATTGAGATGGCCTGTCTGATAACTGACTCAGATCTCAACATTTTGGC TGAAGGTCCTAACCTGATTATAAAACAGCCAGATGAGTTACTGGACAGCATGTCAGATTGGTGTAAGGAGCATCACGGGAAGTCTGGTCTAACCAAAGCAGTGAAGGAGAGTACAATGACATTGCAGC AGGCAGAGTATGAATTTCTGTCCTTTGTACGACAGCAGACTCCTCCGGGGCTCTGTCCACTTGCAGGAAATTCAGTTCATGCAGATAAGAAGTTTCTTGACAAATACATGCCCCAGTTCATGAAACAT CTTCATTATAGAATAATTGATGTGAGCACTGTTAAAGAGCTGTGCAGACGCTGGTATCCAGAAGAATATGAATTTGCACCAAAGAAGGCTGCTTCTCACAGGGCACTTGATGACATTAGCGAAAGCAT CAAAGAACTTCAGTTTTACCGAAATAACATCTTCAAGAAAAAAACAGATGAGAAGAAGAGGAAAATTATAGAAAATGGGGAAAATGAGAAGACTGTGAGTTGATGCCAGTTCTCATGCTGCCACCACA TAGTTCTCTGGAAGCGACTTCTGGTGGTTTTGGTTTTTGTTTTTGTTTTTTTGGCTCACGCTCATTGCTTGGCAGAGCACCTTCCTTCAGTTAACTTGCAACTCCAGATTGATTATTCAAGCAGACAG CACCCGAAAATTATTTTTCTCCTAACATGCTGTTTTCATTTATGACACAGCAGCTCCTTTGTAAGTACCAGGTCACAGGCATCCCTTGGTACATAATCTGTATTTGCTTTTAGACCATTCCTTTTGTT TAAAAAATAATAATAATAAAGCTAGTTCTATTGAAATGCAA
hide sequence
RefSeq Acc Id:
XP_003129926 ⟸ XM_003129878
- UniProtKB:
A0A480TPG6 (UniProtKB/TrEMBL), A0A4X1T1G5 (UniProtKB/TrEMBL), A0A286ZIZ9 (UniProtKB/TrEMBL), A0A8D1SQ50 (UniProtKB/TrEMBL)
- Sequence:
MLGGSLGCRLLRGVGGTRRQFGARGVREGGAAMAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFV RQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKTDEKKRKIIENGENEKTVS
hide sequence
Ensembl Acc Id:
ENSSSCP00000072473 ⟸ ENSSSCT00000074044
Ensembl Acc Id:
ENSSSCP00000031527 ⟸ ENSSSCT00000040955
Ensembl Acc Id:
ENSSSCP00000015981 ⟸ ENSSSCT00000016422
Ensembl Acc Id:
ENSSSCP00000069486 ⟸ ENSSSCT00000084632
Ensembl Acc Id:
ENSSSCP00000069352 ⟸ ENSSSCT00000081559
Ensembl Acc Id:
ENSSSCP00000080427 ⟸ ENSSSCT00000097541