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Gene: TCP11L2 (t-complex 11 like 2) Sus scrofa

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Symbol:

TCP11L2

Name:

t-complex 11 like 2

RGD ID:

13954338

Description:

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

T-complex protein 11-like protein 2

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TCP11L2 (t-complex 11 like 2)	HGNC	Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Tcp11l2 (t-complex 11 (mouse) like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tcp11l2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tcp11l2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TCP11L2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TCP11L2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tcp11l2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TCP11L2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tcp11l2 (t-complex 11 like 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	13,934,170 - 13,982,999 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	13,934,164 - 13,987,458 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	14,169,991 - 14,204,442 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

signal transduction (IBA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:30032202

Genomics

Comparative Map Data

TCP11L2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	13,934,170 - 13,982,999 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	13,934,164 - 13,987,458 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	14,169,991 - 14,204,442 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TCP11L2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	106,297,935 - 106,347,003 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	106,301,929 - 106,347,538 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	106,696,511 - 106,740,781 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	105,220,711 - 105,264,923 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	106,362,190 - 106,406,396 (+)	NCBI		Celera
Cytogenetic Map	12	q23.3	NCBI
HuRef	12	103,756,893 - 103,801,111 (+)	NCBI		HuRef
CHM1_1	12	106,662,401 - 106,706,615 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	106,265,162 - 106,310,306 (+)	NCBI		T2T-CHM13v2.0

Tcp11l2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	84,412,811 - 84,450,219 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	84,412,490 - 84,450,223 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	84,576,947 - 84,614,355 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	84,576,626 - 84,614,359 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	84,039,692 - 84,077,100 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	84,006,746 - 84,044,154 (+)	NCBI		MGSCv36	mm8
Celera	10	86,555,865 - 86,593,264 (+)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	41.55	NCBI

Tcp11l2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	21,037,955 - 21,072,857 (-)	NCBI		GRCr8
mRatBN7.2	7	19,150,241 - 19,185,135 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	19,150,252 - 19,185,095 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	21,111,235 - 21,137,923 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	23,273,912 - 23,300,596 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	23,050,883 - 23,077,567 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	24,859,048 - 24,893,907 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	24,859,050 - 24,885,775 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	25,004,995 - 25,039,844 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	21,279,423 - 21,306,149 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	21,299,696 - 21,326,420 (-)	NCBI
Celera	7	16,359,463 - 16,386,188 (-)	NCBI		Celera
Cytogenetic Map	7	q13	NCBI

Tcp11l2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	40,312,246 - 40,345,201 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	40,312,128 - 40,345,224 (+)	NCBI	ChiLan1.0	ChiLan1.0

TCP11L2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	114,370,041 - 114,416,610 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	114,366,438 - 114,412,198 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	103,881,493 - 103,926,341 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	107,276,622 - 107,320,326 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	107,276,622 - 107,320,326 (+)	Ensembl	panpan1.1		panPan2

TCP11L2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	32,317,178 - 32,354,754 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	32,318,964 - 32,347,071 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	32,237,133 - 32,275,634 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	33,158,132 - 33,196,697 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	33,158,134 - 33,196,506 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	32,894,060 - 32,932,635 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	33,182,851 - 33,221,389 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	33,370,405 - 33,409,008 (-)	NCBI		UU_Cfam_GSD_1.0

Tcp11l2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	15,537,993 - 15,577,045 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	8,548,403 - 8,587,502 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	8,548,407 - 8,587,465 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TCP11L2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	101,523,853 - 101,566,039 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	101,528,405 - 101,568,505 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	143,472,545 - 143,514,840 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tcp11l2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	3,010,243 - 3,040,658 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624750	3,010,707 - 3,045,000 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TCP11L2
1439 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013988238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021091577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021091578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021091579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021091580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01006790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000000178 ⟹ ENSSSCP00000000176

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	13,821,275 - 13,983,005 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000027937 ⟹ ENSSSCP00000021044

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	13,934,170 - 13,982,999 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000066546 ⟹ ENSSSCP00000070873

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	13,958,161 - 13,975,479 (-)	Ensembl

RefSeq Acc Id:

XM_013988238 ⟹ XP_013843692

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	13,934,164 - 13,975,686 (-)	NCBI

Sequence:

show sequence

TAGGTTTAGGTGGTAGGTTTTCTGCTCCGGGCCTTGAACTTTGACAGCAGCAGGCCTGTCAATG
TGTAGTGATATCAGTTTGCAAATGTTCTGGTTGCAGCTGTACCAGATGGGATTCGGTAATTCCG
ATTCAGCTGACACCGAATGAATACTTGTCACATACTTGACACTGATGATGGATGAGACACGGTT
CCTGCCTTATTAAGGAGAGTCGAAACTAGCCACAGGAGGAGAAGAACTACGAGGGACTAAGTGC
TGTTATGCAGATACAGGAGATGTGCTGCAGTCCTATAAAGAAGAGTGTTTTTAGCTCAGGCCAC
GGCACAGAGGGAAGGCTTCCTGGAGAGGGTGGTGTTTTCAAGAAATGCCATCAACGAGAAGTAA
AATGTTGGTAAAGAGAGAGCGAGCGCAGGAAGTTGGGTATTAAAGCTCAAGGAGGATCTGGTTT
GCCTGGGGTATAGGAGGTGCCATCTCTTTATCCACGCTCCAGTGACACAAGATGCCCTTCAATG
GCGAGAAGCATTGTGTGGGCGAAGACCAGCCGAGCGATTCAGACTCTTCCCGGTTTTCCGAAAG
CATGGCTTCCCTCAGTGACTATGAGTGCTCCAGGCAGAGCTTTACAAGCGACTCCTCCAGCAAA
TCCAGCTCCCCTGCTTCAACAAGCCCTCCCAGGGTTGTAACATTTGATGAAGTGATGGCTGCAG
CAAGGAACTTATCAAACATGACTCTTGCTCATGAGATTGCTGTAAATGAGAACTTTCAGTTGAA
ACAAGATGCCCTCCCTGAGAACAGCTTGGCAGGTCGAGTGAGGCACATTGTCCACCAGGCCTTC
TGGGACGTCTTGGAATCAGAACTGAATGCAGAGCCTCCCGAGTATGAGCATGCCATCAAGCTGT
TTGAAGAAATCAGAGAGATTCTTCTTTCTTTTCTGACTCCTGGTGGCAACCGGCTTCGCAACCA
GATCTGTGAAGTTCTGGACACAGACCTTATCAGGCAGCAGGCTGAGCACAGTGCTGTTGACATC
CAAGGCCTGGCCAACTATGTCATCAGTACGATGGGAAAGCTGTGTGCTCCCGTGCGAGATGATG
ATATCCGAGAGTTAAAGGCTACCGGCAACATTGTGGAGGTGCTAAGGCAAATATTTCATGTCCT
GGACCTGATGAAAATGGATATGGTCAATTTTACAATTAGGAGCCTGAGACCACATCTTCAACGC
CAGTTGGTAGATTATGAGAGAACCAAGTTTCAAGAAATTTTAGAAGAAACTCCAAGTGCTCTTG
ATCAAACTACAGAATGGATCAAAGAATCTGTACATGAAGAATTGCTTTCTCTTTCTGAGGCTGC
TCTAACTCCTGGGGCCGAAAACAGCTCCAAGCCAAGCCTGAGCCCTACATTGGTGCTAAATAAC
AGTTATTTGAAACTGTTACAGTGGGATTATCAGAAAAAAGAATTACCAGAGACGCTCATGACAG
ATGGAGCACGTCTTCAGGAACTGACAGAAAAGCTGAATCAATTGAAAATGATTGCCTGCCTGTC
CCTAATTACCAACAACATGGTGGGTGCTCTTACGGAGGGCTTACCTGAGCTTGCAATCAAGCTG
AAAAGGATTTCAGCTGTTCTACTTGAAGGCATGAACAAAGAGACCTTTAACTTGAAGGAAGTCC
TGAATTCCATCGGTATTCAGACTTGTGTTGAGGTTAACAAGACCCTGATGGAGAGGGGTTTACC
TGCTTTAAATGCTGAGGTTCAAGCTAATCTTGTAGGTCAATTCTCAAGCATTGAAGAAGAGGAC
AATCCTGTCTGGTCCTTGATTGATAAACGAATCCAGCTATACATGAAAAGCCTCCTTTGTCTGC
CAAGCCCTCAAAAATGCATGCCTCCTGTGCCAGGAGGCCTCACTGTCATTCAGCAGGAGCTGGA
AGTGCTAGGCTCTCAATATGCAAACATTGTGAATCTCAACAAACAAGTTTATGGACCATTTTAT
GCAAATATACTCCGAAAGCTGCTCTTCAGTGAGGAAGCCACGGGGAAGGCGGATGCTTCATCGT
CTACTAACTAAAGAGGAACTGACATTGGATAAGAGATTGGAAACCCAGCACTTAGGTACCCCTC
CTGTTTTCATCGTTGGCATTACAGGCGCGGCACATTCTCAGGCCTGTCTGTGGGACAGTGTTAG
CCCAAATCTGTGTAAACCAGTAACATTAGTGCTGCAGAAGACGAGTGCATCTCATAGACTCTAT
TTGTGCACCATTTTCAAGTTCAAAAGAAACATTTTTAATGAACAGAAAGCAATTTATAATGAAT
TGTATTACCTATATAATACTCGTGAATGTTTTCTTATGCATTTATATCAGGCTTATTCATTCAA
CCCTTAAGGAGTTATATTTCCTCACTTGTCACTATCAAACCTAATGATTTTTTTTTTAACTTTG
GTACAGCTTTTAAGGGGTTGAAAGTTGTATGAGATGCACTTGTCTTCTGCAGCACTAATGTTAC
TGAATAAATGATGCAAAGTAAGGATAATTGTATTTGAAATGTATAATTCAATTTTATTAATGTG
TAGTAGAAACTTACACAGTAGGTCCTCATATTCTACAACATACCAAAATCACATTTTGTAATAC
CAATTGTCAGTATTTGTCTAGAATTTAAACATATTAAATACATTTTAAAGCTACATACAATTTT
TCGATAAAACCTCCCTTGTTCGTTTAGTGAAAATAGGCACAAACTCCTTCTAAAATTTTATTCT
AGAGGGTAGATTCTTCTTGCAACTTATCCTGCCCTCTGAGGGAAACAATTTTTGCACACATCTC
TTTGTAAATGTCCTGGCATTTCTCAGGCCATTGGTAAGGTTTATATAAGATTTTAATATTTTTA
CATAGGCCGGAGTGGTTTGAATTGGTTTCCTTGTAAGAAGAGAAGTTGACAAAATGAGATCCTT
ATTTTCGGTGAAATTCCCATCTGAAAAAGAAACAGTAGAACTTTGGATTTTTTTTTTTTTTTTT
TAACCATGTAATGTGCTAGCAAATGCCTTCTGTGCCGATTAAATTCTTGCCCTGCTGTGACCAA
GATGTTCTTCTAAGTATCATCATCCTTTGCCATTCTTGTGCATTAGCCTTTGCCAGGCTGGCAC
CAGTCATCAAGATTCGAGAGAAATCTGCTTGTCCTGGAATCCCGTCCTTCTGAAGTGTTAAGCG
GGGCACTACCGTTTGGGTGGACTCAGTCTGGGAAGTGCTTTATTTGCATACAACATTTTTTGAT
GGTTTGGTTTTCTGAAAACTCACTGAACCTTAGTAGTTTGGTGGGAAGAAGAGGTAGGAGGTAA
AATACTCCTTTCTCCCTCACCCCCTCTTCCTCACGACGACCTCTTCCACCAAGATGTGCTCCCT
AATTATTTGAAAAAGTTCTAGGAAATGATTGCGTGAATAAGTTGTCTCAATCTTTACATTTCGG
AGGGCTCTGCCAAAATTCAAGGAAATTGTGAAAGTCTTTTTTTTTTTTTCTGTCACGATGACCG
AGACATAAAGCAGCCGTTCTCTCCATTCGAGCAGCTGTGTGTAAGTGGAATTTCACTGAAGAAC
ACGTCATTGGTCTTACCCGCTTTTTCCCTTTTCCTGTATTTCCATTCTGTCCCTGTTTCGGGAT
GCTTAGAAACCACAAGGTGCTATAGATTTTTGTTTTCATTTTCTCTTAAGTTGAAGTCGTTTTC
AGCTGTGTTCCCTTTGGGGCCTGGATGGACGGCAGGGAAGGTCTGACATAGAAAGGTAATGTGT
AGCCTGACTTTTTGTCACTTTCTGAGATGAACTGTATACTTAACCAGGAAGACCAGGTGGTGTA
CTTTTTTTATTATCAGATTGGTATCCAGCTGGTATTCTTATATATTTGATTATAGTGTAGTTGC
CAGCAGGAAAACAATGTGGAAACATTTTTTTAAATACATTTAAAATGAAGGGCATTCAGCTTTT
TTTTTTTTTTAAGTGGCAAAATAAATCTCAATGTCTCAAGCCTGGATTTAGGCAACTCCATTTA
TTAGGATTTTAAAATCCTATCCCTTAGCATGTTGTTTATTTGGTTTTTACTTAAATGTTTACCT
CTACTTTTGAGAATTTTCTTAACCTAGTCTTGTTTCGTAATGTCAATTTTATGAAATATCATAC
CCATGTTTTCATTCTTCTACTGCTGAAACACGTATGGTATGCTCTAATTAAATTTCAAAACATT
AAAAATTATTTCAACATA

hide sequence

RefSeq Acc Id:

XM_021091577 ⟹ XP_020947236

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	13,934,164 - 13,983,084 (-)	NCBI

Sequence:

show sequence

CGTGGTGGCCACGTCGTGGCTGTCTCCCTAGAGTCCCTCCCGGCTCTTTAAATACCGCGTGGGG
GGGCCGGGGGAGGCTGAGGGTTGTTGGACTCGTGAGTTCCTGAGGTATTTGTGCGTGCGCGTGA
GGGGACACCCGGAGACCAGTGACTCGGCTTCACTCAGTCGCCTTTCTCCCCCGTCTGTCTCCGC
GCCGGACCGGTGCCATCTCTTTATCCACGCTCCAGTGACACAAGATGCCCTTCAATGGCGAGAA
GCATTGTGTGGGCGAAGACCAGCCGAGCGATTCAGACTCTTCCCGGTTTTCCGAAAGCATGGCT
TCCCTCAGTGACTATGAGTGCTCCAGGCAGAGCTTTACAAGCGACTCCTCCAGCAAATCCAGCT
CCCCTGCTTCAACAAGCCCTCCCAGGGTTGTAACATTTGATGAAGTGATGGCTGCAGCAAGGAA
CTTATCAAACATGACTCTTGCTCATGAGATTGCTGTAAATGAGAACTTTCAGTTGAAACAAGAT
GCCCTCCCTGAGAACAGCTTGGCAGGTCGAGTGAGGCACATTGTCCACCAGGCCTTCTGGGACG
TCTTGGAATCAGAACTGAATGCAGAGCCTCCCGAGTATGAGCATGCCATCAAGCTGTTTGAAGA
AATCAGAGAGATTCTTCTTTCTTTTCTGACTCCTGGTGGCAACCGGCTTCGCAACCAGATCTGT
GAAGTTCTGGACACAGACCTTATCAGGCAGCAGGCTGAGCACAGTGCTGTTGACATCCAAGGCC
TGGCCAACTATGTCATCAGTACGATGGGAAAGCTGTGTGCTCCCGTGCGAGATGATGATATCCG
AGAGTTAAAGGCTACCGGCAACATTGTGGAGGTGCTAAGGCAAATATTTCATGTCCTGGACCTG
ATGAAAATGGATATGGTCAATTTTACAATTAGGAGCCTGAGACCACATCTTCAACGCCAGTTGG
TAGATTATGAGAGAACCAAGTTTCAAGAAATTTTAGAAGAAACTCCAAGTGCTCTTGATCAAAC
TACAGAATGGATCAAAGAATCTGTACATGAAGAATTGCTTTCTCTTTCTGAGGCTGCTCTAACT
CCTGGGGCCGAAAACAGCTCCAAGCCAAGCCTGAGCCCTACATTGGTGCTAAATAACAGTTATT
TGAAACTGTTACAGTGGGATTATCAGAAAAAAGAATTACCAGAGACGCTCATGACAGATGGAGC
ACGTCTTCAGGAACTGACAGAAAAGCTGAATCAATTGAAAATGATTGCCTGCCTGTCCCTAATT
ACCAACAACATGGTGGGTGCTCTTACGGAGGGCTTACCTGAGCTTGCAATCAAGCTGAAAAGGA
TTTCAGCTGTTCTACTTGAAGGCATGAACAAAGAGACCTTTAACTTGAAGGAAGTCCTGAATTC
CATCGGTATTCAGACTTGTGTTGAGGTTAACAAGACCCTGATGGAGAGGGGTTTACCTGCTTTA
AATGCTGAGGTTCAAGCTAATCTTGTAGGTCAATTCTCAAGCATTGAAGAAGAGGACAATCCTG
TCTGGTCCTTGATTGATAAACGAATCCAGCTATACATGAAAAGCCTCCTTTGTCTGCCAAGCCC
TCAAAAATGCATGCCTCCTGTGCCAGGAGGCCTCACTGTCATTCAGCAGGAGCTGGAAGTGCTA
GGCTCTCAATATGCAAACATTGTGAATCTCAACAAACAAGTTTATGGACCATTTTATGCAAATA
TACTCCGAAAGCTGCTCTTCAGTGAGGAAGCCACGGGGAAGGCGGATGCTTCATCGTCTACTAA
CTAAAGAGGAACTGACATTGGATAAGAGATTGGAAACCCAGCACTTAGGTACCCCTCCTGTTTT
CATCGTTGGCATTACAGGCGCGGCACATTCTCAGGCCTGTCTGTGGGACAGTGTTAGCCCAAAT
CTGTGTAAACCAGTAACATTAGTGCTGCAGAAGACGAGTGCATCTCATAGACTCTATTTGTGCA
CCATTTTCAAGTTCAAAAGAAACATTTTTAATGAACAGAAAGCAATTTATAATGAATTGTATTA
CCTATATAATACTCGTGAATGTTTTCTTATGCATTTATATCAGGCTTATTCATTCAACCCTTAA
GGAGTTATATTTCCTCACTTGTCACTATCAAACCTAATGATTTTTTTTTTAACTTTGGTACAGC
TTTTAAGGGGTTGAAAGTTGTATGAGATGCACTTGTCTTCTGCAGCACTAATGTTACTGAATAA
ATGATGCAAAGTAAGGATAATTGTATTTGAAATGTATAATTCAATTTTATTAATGTGTAGTAGA
AACTTACACAGTAGGTCCTCATATTCTACAACATACCAAAATCACATTTTGTAATACCAATTGT
CAGTATTTGTCTAGAATTTAAACATATTAAATACATTTTAAAGCTACATACAATTTTTCGATAA
AACCTCCCTTGTTCGTTTAGTGAAAATAGGCACAAACTCCTTCTAAAATTTTATTCTAGAGGGT
AGATTCTTCTTGCAACTTATCCTGCCCTCTGAGGGAAACAATTTTTGCACACATCTCTTTGTAA
ATGTCCTGGCATTTCTCAGGCCATTGGTAAGGTTTATATAAGATTTTAATATTTTTACATAGGC
CGGAGTGGTTTGAATTGGTTTCCTTGTAAGAAGAGAAGTTGACAAAATGAGATCCTTATTTTCG
GTGAAATTCCCATCTGAAAAAGAAACAGTAGAACTTTGGATTTTTTTTTTTTTTTTTTAACCAT
GTAATGTGCTAGCAAATGCCTTCTGTGCCGATTAAATTCTTGCCCTGCTGTGACCAAGATGTTC
TTCTAAGTATCATCATCCTTTGCCATTCTTGTGCATTAGCCTTTGCCAGGCTGGCACCAGTCAT
CAAGATTCGAGAGAAATCTGCTTGTCCTGGAATCCCGTCCTTCTGAAGTGTTAAGCGGGGCACT
ACCGTTTGGGTGGACTCAGTCTGGGAAGTGCTTTATTTGCATACAACATTTTTTGATGGTTTGG
TTTTCTGAAAACTCACTGAACCTTAGTAGTTTGGTGGGAAGAAGAGGTAGGAGGTAAAATACTC
CTTTCTCCCTCACCCCCTCTTCCTCACGACGACCTCTTCCACCAAGATGTGCTCCCTAATTATT
TGAAAAAGTTCTAGGAAATGATTGCGTGAATAAGTTGTCTCAATCTTTACATTTCGGAGGGCTC
TGCCAAAATTCAAGGAAATTGTGAAAGTCTTTTTTTTTTTTTCTGTCACGATGACCGAGACATA
AAGCAGCCGTTCTCTCCATTCGAGCAGCTGTGTGTAAGTGGAATTTCACTGAAGAACACGTCAT
TGGTCTTACCCGCTTTTTCCCTTTTCCTGTATTTCCATTCTGTCCCTGTTTCGGGATGCTTAGA
AACCACAAGGTGCTATAGATTTTTGTTTTCATTTTCTCTTAAGTTGAAGTCGTTTTCAGCTGTG
TTCCCTTTGGGGCCTGGATGGACGGCAGGGAAGGTCTGACATAGAAAGGTAATGTGTAGCCTGA
CTTTTTGTCACTTTCTGAGATGAACTGTATACTTAACCAGGAAGACCAGGTGGTGTACTTTTTT
TATTATCAGATTGGTATCCAGCTGGTATTCTTATATATTTGATTATAGTGTAGTTGCCAGCAGG
AAAACAATGTGGAAACATTTTTTTAAATACATTTAAAATGAAGGGCATTCAGCTTTTTTTTTTT
TTTAAGTGGCAAAATAAATCTCAATGTCTCAAGCCTGGATTTAGGCAACTCCATTTATTAGGAT
TTTAAAATCCTATCCCTTAGCATGTTGTTTATTTGGTTTTTACTTAAATGTTTACCTCTACTTT
TGAGAATTTTCTTAACCTAGTCTTGTTTCGTAATGTCAATTTTATGAAATATCATACCCATGTT
TTCATTCTTCTACTGCTGAAACACGTATGGTATGCTCTAATTAAATTTCAAAACATTAAAAATT
ATTTCAACATA

hide sequence

RefSeq Acc Id:

XM_021091578 ⟹ XP_020947237

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	13,934,164 - 13,987,458 (-)	NCBI

Sequence:

show sequence

CGTCCAGGAGCTGTCTTCTCTGCTGTCCGCATTCTCTCTTTTTCTTTCCCGGGGACAACAATAC
TTCCCAGGTGCCATCTCTTTATCCACGCTCCAGTGACACAAGATGCCCTTCAATGGCGAGAAGC
ATTGTGTGGGCGAAGACCAGCCGAGCGATTCAGACTCTTCCCGGTTTTCCGAAAGCATGGCTTC
CCTCAGTGACTATGAGTGCTCCAGGCAGAGCTTTACAAGCGACTCCTCCAGCAAATCCAGCTCC
CCTGCTTCAACAAGCCCTCCCAGGGTTGTAACATTTGATGAAGTGATGGCTGCAGCAAGGAACT
TATCAAACATGACTCTTGCTCATGAGATTGCTGTAAATGAGAACTTTCAGTTGAAACAAGATGC
CCTCCCTGAGAACAGCTTGGCAGGTCGAGTGAGGCACATTGTCCACCAGGCCTTCTGGGACGTC
TTGGAATCAGAACTGAATGCAGAGCCTCCCGAGTATGAGCATGCCATCAAGCTGTTTGAAGAAA
TCAGAGAGATTCTTCTTTCTTTTCTGACTCCTGGTGGCAACCGGCTTCGCAACCAGATCTGTGA
AGTTCTGGACACAGACCTTATCAGGCAGCAGGCTGAGCACAGTGCTGTTGACATCCAAGGCCTG
GCCAACTATGTCATCAGTACGATGGGAAAGCTGTGTGCTCCCGTGCGAGATGATGATATCCGAG
AGTTAAAGGCTACCGGCAACATTGTGGAGGTGCTAAGGCAAATATTTCATGTCCTGGACCTGAT
GAAAATGGATATGGTCAATTTTACAATTAGGAGCCTGAGACCACATCTTCAACGCCAGTTGGTA
GATTATGAGAGAACCAAGTTTCAAGAAATTTTAGAAGAAACTCCAAGTGCTCTTGATCAAACTA
CAGAATGGATCAAAGAATCTGTACATGAAGAATTGCTTTCTCTTTCTGAGGCTGCTCTAACTCC
TGGGGCCGAAAACAGCTCCAAGCCAAGCCTGAGCCCTACATTGGTGCTAAATAACAGTTATTTG
AAACTGTTACAGTGGGATTATCAGAAAAAAGAATTACCAGAGACGCTCATGACAGATGGAGCAC
GTCTTCAGGAACTGACAGAAAAGCTGAATCAATTGAAAATGATTGCCTGCCTGTCCCTAATTAC
CAACAACATGGTGGGTGCTCTTACGGAGGGCTTACCTGAGCTTGCAATCAAGCTGAAAAGGATT
TCAGCTGTTCTACTTGAAGGCATGAACAAAGAGACCTTTAACTTGAAGGAAGTCCTGAATTCCA
TCGGTATTCAGACTTGTGTTGAGGTTAACAAGACCCTGATGGAGAGGGGTTTACCTGCTTTAAA
TGCTGAGGTTCAAGCTAATCTTGTAGGTCAATTCTCAAGCATTGAAGAAGAGGACAATCCTGTC
TGGTCCTTGATTGATAAACGAATCCAGCTATACATGAAAAGCCTCCTTTGTCTGCCAAGCCCTC
AAAAATGCATGCCTCCTGTGCCAGGAGGCCTCACTGTCATTCAGCAGGAGCTGGAAGTGCTAGG
CTCTCAATATGCAAACATTGTGAATCTCAACAAACAAGTTTATGGACCATTTTATGCAAATATA
CTCCGAAAGCTGCTCTTCAGTGAGGAAGCCACGGGGAAGGCGGATGCTTCATCGTCTACTAACT
AAAGAGGAACTGACATTGGATAAGAGATTGGAAACCCAGCACTTAGGTACCCCTCCTGTTTTCA
TCGTTGGCATTACAGGCGCGGCACATTCTCAGGCCTGTCTGTGGGACAGTGTTAGCCCAAATCT
GTGTAAACCAGTAACATTAGTGCTGCAGAAGACGAGTGCATCTCATAGACTCTATTTGTGCACC
ATTTTCAAGTTCAAAAGAAACATTTTTAATGAACAGAAAGCAATTTATAATGAATTGTATTACC
TATATAATACTCGTGAATGTTTTCTTATGCATTTATATCAGGCTTATTCATTCAACCCTTAAGG
AGTTATATTTCCTCACTTGTCACTATCAAACCTAATGATTTTTTTTTTAACTTTGGTACAGCTT
TTAAGGGGTTGAAAGTTGTATGAGATGCACTTGTCTTCTGCAGCACTAATGTTACTGAATAAAT
GATGCAAAGTAAGGATAATTGTATTTGAAATGTATAATTCAATTTTATTAATGTGTAGTAGAAA
CTTACACAGTAGGTCCTCATATTCTACAACATACCAAAATCACATTTTGTAATACCAATTGTCA
GTATTTGTCTAGAATTTAAACATATTAAATACATTTTAAAGCTACATACAATTTTTCGATAAAA
CCTCCCTTGTTCGTTTAGTGAAAATAGGCACAAACTCCTTCTAAAATTTTATTCTAGAGGGTAG
ATTCTTCTTGCAACTTATCCTGCCCTCTGAGGGAAACAATTTTTGCACACATCTCTTTGTAAAT
GTCCTGGCATTTCTCAGGCCATTGGTAAGGTTTATATAAGATTTTAATATTTTTACATAGGCCG
GAGTGGTTTGAATTGGTTTCCTTGTAAGAAGAGAAGTTGACAAAATGAGATCCTTATTTTCGGT
GAAATTCCCATCTGAAAAAGAAACAGTAGAACTTTGGATTTTTTTTTTTTTTTTTTAACCATGT
AATGTGCTAGCAAATGCCTTCTGTGCCGATTAAATTCTTGCCCTGCTGTGACCAAGATGTTCTT
CTAAGTATCATCATCCTTTGCCATTCTTGTGCATTAGCCTTTGCCAGGCTGGCACCAGTCATCA
AGATTCGAGAGAAATCTGCTTGTCCTGGAATCCCGTCCTTCTGAAGTGTTAAGCGGGGCACTAC
CGTTTGGGTGGACTCAGTCTGGGAAGTGCTTTATTTGCATACAACATTTTTTGATGGTTTGGTT
TTCTGAAAACTCACTGAACCTTAGTAGTTTGGTGGGAAGAAGAGGTAGGAGGTAAAATACTCCT
TTCTCCCTCACCCCCTCTTCCTCACGACGACCTCTTCCACCAAGATGTGCTCCCTAATTATTTG
AAAAAGTTCTAGGAAATGATTGCGTGAATAAGTTGTCTCAATCTTTACATTTCGGAGGGCTCTG
CCAAAATTCAAGGAAATTGTGAAAGTCTTTTTTTTTTTTTCTGTCACGATGACCGAGACATAAA
GCAGCCGTTCTCTCCATTCGAGCAGCTGTGTGTAAGTGGAATTTCACTGAAGAACACGTCATTG
GTCTTACCCGCTTTTTCCCTTTTCCTGTATTTCCATTCTGTCCCTGTTTCGGGATGCTTAGAAA
CCACAAGGTGCTATAGATTTTTGTTTTCATTTTCTCTTAAGTTGAAGTCGTTTTCAGCTGTGTT
CCCTTTGGGGCCTGGATGGACGGCAGGGAAGGTCTGACATAGAAAGGTAATGTGTAGCCTGACT
TTTTGTCACTTTCTGAGATGAACTGTATACTTAACCAGGAAGACCAGGTGGTGTACTTTTTTTA
TTATCAGATTGGTATCCAGCTGGTATTCTTATATATTTGATTATAGTGTAGTTGCCAGCAGGAA
AACAATGTGGAAACATTTTTTTAAATACATTTAAAATGAAGGGCATTCAGCTTTTTTTTTTTTT
TAAGTGGCAAAATAAATCTCAATGTCTCAAGCCTGGATTTAGGCAACTCCATTTATTAGGATTT
TAAAATCCTATCCCTTAGCATGTTGTTTATTTGGTTTTTACTTAAATGTTTACCTCTACTTTTG
AGAATTTTCTTAACCTAGTCTTGTTTCGTAATGTCAATTTTATGAAATATCATACCCATGTTTT
CATTCTTCTACTGCTGAAACACGTATGGTATGCTCTAATTAAATTTCAAAACATTAAAAATTAT
TTCAACATA

hide sequence

RefSeq Acc Id:

XM_021091579 ⟹ XP_020947238

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	13,934,164 - 13,983,043 (-)	NCBI

Sequence:

show sequence

GGCTCTTTAAATACCGCGTGGGGGGGCCGGGGGAGGCTGAGGGTTGTTGGACTCGTGAGTTCCT
GAGGTATTTGTGCGTGCGCGTGAGGGGACACCCGGAGACCAGTGACTCGGCTTCACTCAGTCGC
CTTTCTCCCCCGTCTGTCTCCGCGCCGGACCGGTGCCATCTCTTTATCCACGCTCCAGTGACAC
AAGATGCCCTTCAATGGCGAGAAGCATTGTGTGGGCGAAGACCAGCCGAGCGATTCAGACTCTT
CCCGGTTTTCCGAAAGCATGGCTTCCCTCAGTGACTATGAGTGCTCCAGGCAGAGCTTTACAAG
CGACTCCTCCAGCAAATCCAGCTCCCCTGCTTCAACAAGCCCTCCCAGGGTTGTAACATTTGAT
GAAGTGATGGCTGCAGCAAGGAACTTATCAAACATGACTCTTGCTCATGAGATTGCTGTAAATG
AGAACTTTCAGTTGAAACAAGATGCCCTCCCTGAGAACAGCTTGGCAGGTCGAGTGAGGCACAT
TGTCCACCAGGCCTTCTGGGACGTCTTGGAATCAGAACTGAATGCAGAGCCTCCCGAGTATGAG
CATGCCATCAAGCTGTTTGAAGAAATCAGAGAGATTCTTCTTTCTTTTCTGACTCCTGGTGGCA
ACCGGCTTCGCAACCAGATCTGTGAAGTTCTGGACACAGACCTTATCAGGCAGCAGGCTGAGCA
CAGTGCTGTTGACATCCAAGGCCTGGCCAACTATGTCATCAGTACGATGGGAAAGCTGTGTGCT
CCCGTGCGAGATGATGATATCCGAGAGTTAAAGGCTACCGGCAACATTGTGGAGGTGCTAAGGC
AAATATTTCATGTCCTGGACCTGATGAAAATGGATATGGTCAATTTTACAATTAGGAGCCTGAG
ACCACATCTTCAACGCCAGTTGGTAGATTATGAGAGAACCAAGTTTCAAGAAATTTTAGAAGAA
ACTCCAAGTGCTCTTGATCAAACTACAGAATGGATCAAAGAATCTGTACATGAAGAATTGCTTT
CTCTTTCTGAGGCTGCTCTAACTCCTGGGGCCGAAAACAGCTCCAAGCCAAGCCTGAGCCCTAC
ATTGGTGCTAAATAACAGTTATTTGAAACTGTTACAGTGGGATTATCAGAAAAAAGAATTACCA
GAGACGCTCATGACAGATGGAGCACGTCTTCAGGAACTGACAGAAAAGCTGAATCAATTGAAAA
TGATTGCCTGCCTGTCCCTAATTACCAACAACATGGTGGGTGCTCTTACGGAGGGCTTACCTGA
GCTTGCAATCAAGCTGAAAAGGATTTCAGCTGTTCTACTTGAAGGCATGAACAAAGAGACCTTT
AACTTGAAGGAAGTCCTGAATTCCATCGGTATTCAGACTTGTGTTGAGGTTAACAAGACCCTGA
TGGAGAGGGGTTTACCTGCTTTAAATGCTGAGGTTCAAGCTAATCTTGTAGGTCAATTCTCAAG
CATTGAAGAAGAGGACAATCCTGTCTGGTCCTTGATTGATCGCCCGAAAACTCCATCTGTCATT
GCCTACAAGTCTCTGGGGGCAACTGGTTAGTTGTGGGACTCACGCGTGCGTTCCTTGTCAGCTG
TGGCTTGGATAAACGAATCCAGCTATACATGAAAAGCCTCCTTTGTCTGCCAAGCCCTCAAAAA
TGCATGCCTCCTGTGCCAGGAGGCCTCACTGTCATTCAGCAGGAGCTGGAAGTGCTAGGCTCTC
AATATGCAAACATTGTGAATCTCAACAAACAAGTTTATGGACCATTTTATGCAAATATACTCCG
AAAGCTGCTCTTCAGTGAGGAAGCCACGGGGAAGGCGGATGCTTCATCGTCTACTAACTAAAGA
GGAACTGACATTGGATAAGAGATTGGAAACCCAGCACTTAGGTACCCCTCCTGTTTTCATCGTT
GGCATTACAGGCGCGGCACATTCTCAGGCCTGTCTGTGGGACAGTGTTAGCCCAAATCTGTGTA
AACCAGTAACATTAGTGCTGCAGAAGACGAGTGCATCTCATAGACTCTATTTGTGCACCATTTT
CAAGTTCAAAAGAAACATTTTTAATGAACAGAAAGCAATTTATAATGAATTGTATTACCTATAT
AATACTCGTGAATGTTTTCTTATGCATTTATATCAGGCTTATTCATTCAACCCTTAAGGAGTTA
TATTTCCTCACTTGTCACTATCAAACCTAATGATTTTTTTTTTAACTTTGGTACAGCTTTTAAG
GGGTTGAAAGTTGTATGAGATGCACTTGTCTTCTGCAGCACTAATGTTACTGAATAAATGATGC
AAAGTAAGGATAATTGTATTTGAAATGTATAATTCAATTTTATTAATGTGTAGTAGAAACTTAC
ACAGTAGGTCCTCATATTCTACAACATACCAAAATCACATTTTGTAATACCAATTGTCAGTATT
TGTCTAGAATTTAAACATATTAAATACATTTTAAAGCTACATACAATTTTTCGATAAAACCTCC
CTTGTTCGTTTAGTGAAAATAGGCACAAACTCCTTCTAAAATTTTATTCTAGAGGGTAGATTCT
TCTTGCAACTTATCCTGCCCTCTGAGGGAAACAATTTTTGCACACATCTCTTTGTAAATGTCCT
GGCATTTCTCAGGCCATTGGTAAGGTTTATATAAGATTTTAATATTTTTACATAGGCCGGAGTG
GTTTGAATTGGTTTCCTTGTAAGAAGAGAAGTTGACAAAATGAGATCCTTATTTTCGGTGAAAT
TCCCATCTGAAAAAGAAACAGTAGAACTTTGGATTTTTTTTTTTTTTTTTTAACCATGTAATGT
GCTAGCAAATGCCTTCTGTGCCGATTAAATTCTTGCCCTGCTGTGACCAAGATGTTCTTCTAAG
TATCATCATCCTTTGCCATTCTTGTGCATTAGCCTTTGCCAGGCTGGCACCAGTCATCAAGATT
CGAGAGAAATCTGCTTGTCCTGGAATCCCGTCCTTCTGAAGTGTTAAGCGGGGCACTACCGTTT
GGGTGGACTCAGTCTGGGAAGTGCTTTATTTGCATACAACATTTTTTGATGGTTTGGTTTTCTG
AAAACTCACTGAACCTTAGTAGTTTGGTGGGAAGAAGAGGTAGGAGGTAAAATACTCCTTTCTC
CCTCACCCCCTCTTCCTCACGACGACCTCTTCCACCAAGATGTGCTCCCTAATTATTTGAAAAA
GTTCTAGGAAATGATTGCGTGAATAAGTTGTCTCAATCTTTACATTTCGGAGGGCTCTGCCAAA
ATTCAAGGAAATTGTGAAAGTCTTTTTTTTTTTTTCTGTCACGATGACCGAGACATAAAGCAGC
CGTTCTCTCCATTCGAGCAGCTGTGTGTAAGTGGAATTTCACTGAAGAACACGTCATTGGTCTT
ACCCGCTTTTTCCCTTTTCCTGTATTTCCATTCTGTCCCTGTTTCGGGATGCTTAGAAACCACA
AGGTGCTATAGATTTTTGTTTTCATTTTCTCTTAAGTTGAAGTCGTTTTCAGCTGTGTTCCCTT
TGGGGCCTGGATGGACGGCAGGGAAGGTCTGACATAGAAAGGTAATGTGTAGCCTGACTTTTTG
TCACTTTCTGAGATGAACTGTATACTTAACCAGGAAGACCAGGTGGTGTACTTTTTTTATTATC
AGATTGGTATCCAGCTGGTATTCTTATATATTTGATTATAGTGTAGTTGCCAGCAGGAAAACAA
TGTGGAAACATTTTTTTAAATACATTTAAAATGAAGGGCATTCAGCTTTTTTTTTTTTTTAAGT
GGCAAAATAAATCTCAATGTCTCAAGCCTGGATTTAGGCAACTCCATTTATTAGGATTTTAAAA
TCCTATCCCTTAGCATGTTGTTTATTTGGTTTTTACTTAAATGTTTACCTCTACTTTTGAGAAT
TTTCTTAACCTAGTCTTGTTTCGTAATGTCAATTTTATGAAATATCATACCCATGTTTTCATTC
TTCTACTGCTGAAACACGTATGGTATGCTCTAATTAAATTTCAAAACATTAAAAATTATTTCAA
CATA

hide sequence

RefSeq Acc Id:

XM_021091580 ⟹ XP_020947239

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	13,936,461 - 13,983,043 (-)	NCBI

Sequence:

show sequence

GGCTCTTTAAATACCGCGTGGGGGGGCCGGGGGAGGCTGAGGGTTGTTGGACTCGTGAGTTCCT
GAGGTATTTGTGCGTGCGCGTGAGGGGACACCCGGAGACCAGTGACTCGGCTTCACTCAGTCGC
CTTTCTCCCCCGTCTGTCTCCGCGCCGGACCGGTGCCATCTCTTTATCCACGCTCCAGTGACAC
AAGATGCCCTTCAATGGCGAGAAGCATTGTGTGGGCGAAGACCAGCCGAGCGATTCAGACTCTT
CCCGGTTTTCCGAAAGCATGGCTTCCCTCAGTGACTATGAGTGCTCCAGGCAGAGCTTTACAAG
CGACTCCTCCAGCAAATCCAGCTCCCCTGCTTCAACAAGCCCTCCCAGGGTTGTAACATTTGAT
GAAGTGATGGCTGCAGCAAGGAACTTATCAAACATGACTCTTGCTCATGAGATTGCTGTAAATG
AGAACTTTCAGTTGAAACAAGATGCCCTCCCTGAGAACAGCTTGGCAGGTCGAGTGAGGCACAT
TGTCCACCAGGCCTTCTGGGACGTCTTGGAATCAGAACTGAATGCAGAGCCTCCCGAGTATGAG
CATGCCATCAAGCTGTTTGAAGAAATCAGAGAGATTCTTCTTTCTTTTCTGACTCCTGGTGGCA
ACCGGCTTCGCAACCAGATCTGTGAAGTTCTGGACACAGACCTTATCAGGCAGCAGGCTGAGCA
CAGTGCTGTTGACATCCAAGGCCTGGCCAACTATGTCATCAGTACGATGGGAAAGCTGTGTGCT
CCCGTGCGAGATGATGATATCCGAGAGTTAAAGGCTACCGGCAACATTGTGGAGGTGCTAAGGC
AAATATTTCATGTCCTGGACCTGATGAAAATGGATATGGTCAATTTTACAATTAGGAGCCTGAG
ACCACATCTTCAACGCCAGTTGGTAGATTATGAGAGAACCAAGTTTCAAGAAATTTTAGAAGAA
ACTCCAAGTGCTCTTGATCAAACTACAGAATGGATCAAAGAATCTGTACATGAAGAATTGCTTT
CTCTTTCTGAGGCTGCTCTAACTCCTGGGGCCGAAAACAGCTCCAAGCCAAGCCTGAGCCCTAC
ATTGGTGCTAAATAACAGTTATTTGAAACTGTTACAGTGGGATTATCAGAAAAAAGAATTACCA
GAGACGCTCATGACAGATGGAGCACGTCTTCAGGAACTGACAGAAAAGCTGAATCAATTGAAAA
TGATTGCCTGCCTGTCCCTAATTACCAACAACATGGTGGGTGCTCTTACGGAGGGCTTACCTGA
GCTTGCAATCAAGCTGAAAAGGATTTCAGCTGTTCTACTTGAAGGCATGAACAAAGAATAAACG
AATCCAGCTATACATGAAAAGCCTCCTTTGTCTGCCAAGCCCTCAAAAATGCATGCCTCCTGTG
CCAGGAGGCCTCACTGTCATTCAGCAGGAGCTGGAAGTGCTAGGCTCTCAATATGCAAAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_013843692	(Get FASTA)	NCBI Sequence Viewer
	XP_020947236	(Get FASTA)	NCBI Sequence Viewer
	XP_020947237	(Get FASTA)	NCBI Sequence Viewer
	XP_020947238	(Get FASTA)	NCBI Sequence Viewer
	XP_020947239	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000021044
	ENSSSCP00000021044.4
	ENSSSCP00000070873.1
	ENSSSCP00015031841.1
	ENSSSCP00015031955.1
	ENSSSCP00035029734.1
	ENSSSCP00040025331.1
	ENSSSCP00040025502.1
	ENSSSCP00050034032.1
	ENSSSCP00055027691.1
	ENSSSCP00070052394.1
	ENSSSCP00070052397.1
	ENSSSCP00070052399.1
	ENSSSCP00070052400.1

RefSeq Acc Id:	XP_020947237 ⟸ XM_021091578
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1WCU6 (UniProtKB/TrEMBL), I3LAH6 (UniProtKB/TrEMBL), F1SPQ0 (UniProtKB/TrEMBL), A0A8D0PI49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDE VMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEH AIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAP VRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEET PSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPE TLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKETFN LKEVLNSIGIQTCVEVNKTLMERGLPALNAEVQANLVGQFSSIEEEDNPVWSLIDKRIQLYMKS LLCLPSPQKCMPPVPGGLTVIQQELEVLGSQYANIVNLNKQVYGPFYANILRKLLFSEEATGKA DASSSTN hide sequence

RefSeq Acc Id:	XP_020947236 ⟸ XM_021091577
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1WCU6 (UniProtKB/TrEMBL), I3LAH6 (UniProtKB/TrEMBL), F1SPQ0 (UniProtKB/TrEMBL), A0A8D0PI49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDE VMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEH AIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAP VRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEET PSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPE TLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKETFN LKEVLNSIGIQTCVEVNKTLMERGLPALNAEVQANLVGQFSSIEEEDNPVWSLIDKRIQLYMKS LLCLPSPQKCMPPVPGGLTVIQQELEVLGSQYANIVNLNKQVYGPFYANILRKLLFSEEATGKA DASSSTN hide sequence

RefSeq Acc Id:	XP_020947238 ⟸ XM_021091579
- Peptide Label:	isoform X2
- UniProtKB:	A0A480R7V7 (UniProtKB/TrEMBL), A0A8D0PDG7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDE VMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEH AIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAP VRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEET PSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPE TLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKETFN LKEVLNSIGIQTCVEVNKTLMERGLPALNAEVQANLVGQFSSIEEEDNPVWSLIDRPKTPSVIA YKSLGATG hide sequence

RefSeq Acc Id:	XP_013843692 ⟸ XM_013988238
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1WCU6 (UniProtKB/TrEMBL), I3LAH6 (UniProtKB/TrEMBL), F1SPQ0 (UniProtKB/TrEMBL), A0A8D0PI49 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDE VMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEH AIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAP VRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEET PSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPE TLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKETFN LKEVLNSIGIQTCVEVNKTLMERGLPALNAEVQANLVGQFSSIEEEDNPVWSLIDKRIQLYMKS LLCLPSPQKCMPPVPGGLTVIQQELEVLGSQYANIVNLNKQVYGPFYANILRKLLFSEEATGKA DASSSTN hide sequence

RefSeq Acc Id:	XP_020947239 ⟸ XM_021091580
- Peptide Label:	isoform X3
- UniProtKB:	A0A480R7V7 (UniProtKB/TrEMBL), A0A8D0PDG7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDE VMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEH AIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAP VRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEET PSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPE TLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKE hide sequence

Ensembl Acc Id:

ENSSSCP00000070873 ⟸ ENSSSCT00000066546

Ensembl Acc Id:

ENSSSCP00000021044 ⟸ ENSSSCT00000027937

Ensembl Acc Id:

ENSSSCP00000000176 ⟸ ENSSSCT00000000178

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000024881	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015059067	UniProtKB/TrEMBL
	ENSSSCG00035054946	UniProtKB/TrEMBL
	ENSSSCG00040044982	UniProtKB/TrEMBL
	ENSSSCG00050058013	UniProtKB/TrEMBL
	ENSSSCG00055017773	UniProtKB/TrEMBL
	ENSSSCG00070030532	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000027937	ENTREZGENE
	ENSSSCT00000027937.4	UniProtKB/TrEMBL
	ENSSSCT00000066546.2	UniProtKB/TrEMBL
	ENSSSCT00015078904.1	UniProtKB/TrEMBL
	ENSSSCT00015079166.1	UniProtKB/TrEMBL
	ENSSSCT00035073302.1	UniProtKB/TrEMBL
	ENSSSCT00040060346.1	UniProtKB/TrEMBL
	ENSSSCT00040060719.1	UniProtKB/TrEMBL
	ENSSSCT00050079110.1	UniProtKB/TrEMBL
	ENSSSCT00055034860.1	UniProtKB/TrEMBL
	ENSSSCT00070061455.1	UniProtKB/TrEMBL
	ENSSSCT00070061458.1	UniProtKB/TrEMBL
	ENSSSCT00070061460.1	UniProtKB/TrEMBL
	ENSSSCT00070061461.1	UniProtKB/TrEMBL
InterPro	Tcp11	UniProtKB/TrEMBL
KEGG Report	ssc:100620963	UniProtKB/TrEMBL
NCBI Gene	TCP11L2	ENTREZGENE
PANTHER	PTHR12832	UniProtKB/TrEMBL
	T-COMPLEX PROTEIN 11-LIKE PROTEIN 2	UniProtKB/TrEMBL
Pfam	Tcp11	UniProtKB/TrEMBL
UniProt	A0A480R7V7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1WCU6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1WDY5_PIG	UniProtKB/TrEMBL
	A0A5G2R185_PIG	UniProtKB/TrEMBL
	A0A8D0PDG7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0PI49	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1ENP8_PIG	UniProtKB/TrEMBL
	F1SPQ0	ENTREZGENE, UniProtKB/TrEMBL
	I3LAH6	ENTREZGENE
UniProt Secondary	I3LAH6	UniProtKB/TrEMBL
VGNC ID	VGNC:93835	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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