KCNK7 (potassium two pore domain channel subfamily K member 7) - Rat Genome Database

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Gene: KCNK7 (potassium two pore domain channel subfamily K member 7) Sus scrofa
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Symbol: KCNK7
Name: potassium two pore domain channel subfamily K member 7
RGD ID: 13904279
Description: ENCODES a protein that exhibits potassium channel activity (inferred); INVOLVED IN monoatomic ion transmembrane transport (inferred); potassium ion transmembrane transport (inferred); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); Bardet-Biedl syndrome (ortholog); glycogen storage disease V (ortholog); FOUND IN membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: potassium channel subfamily K member 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl26,659,054 - 6,662,288 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.126,657,841 - 6,662,445 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,881,587 - 5,887,312 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KCNK7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl26,659,054 - 6,662,288 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.126,657,841 - 6,662,445 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.225,881,587 - 5,887,312 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNK7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,592,836 - 65,595,800 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,592,836 - 65,595,996 (-)EnsemblGRCh38hg38GRCh38
GRCh371165,360,307 - 65,363,271 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361165,116,902 - 65,120,043 (-)NCBINCBI36Build 36hg18NCBI36
Celera1162,687,036 - 62,690,177 (-)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,687,292 - 61,690,433 (-)NCBIHuRef
CHM1_11165,244,223 - 65,247,364 (-)NCBICHM1_1
T2T-CHM13v2.01165,587,069 - 65,590,033 (-)NCBIT2T-CHM13v2.0
Kcnk7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39195,754,471 - 5,757,956 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl195,754,395 - 5,757,137 (+)EnsemblGRCm39 Ensembl
GRCm38195,704,471 - 5,707,984 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl195,704,367 - 5,707,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv37195,704,476 - 5,707,101 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36195,704,476 - 5,707,101 (+)NCBIMGSCv36mm8
Celera195,574,527 - 5,577,151 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
Kcnk7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,419,555 - 212,422,173 (+)NCBIGRCr8
mRatBN7.21202,988,801 - 202,992,842 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1202,990,198 - 202,992,872 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01221,056,477 - 221,060,607 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,057,713 - 221,060,747 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01227,991,803 - 227,995,929 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,327,893 - 208,330,476 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1200,524,457 - 200,528,587 (+)NCBICelera
Cytogenetic Map1q43NCBI
Kcnk7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542219,666,974 - 19,670,449 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542219,666,974 - 19,670,449 (+)NCBIChiLan1.0ChiLan1.0
KCNK7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2966,822,501 - 66,827,369 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11167,865,262 - 67,870,121 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01160,951,961 - 60,955,240 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11164,286,502 - 64,289,737 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1164,286,502 - 64,289,662 (-)Ensemblpanpan1.1panPan2
KCNK7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11851,609,373 - 51,613,802 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1851,610,746 - 51,613,675 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,217,779 - 50,222,188 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01852,646,545 - 52,650,954 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1852,647,896 - 52,650,826 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11851,746,437 - 51,750,846 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,320,479 - 51,324,886 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,110,874 - 52,115,286 (+)NCBIUU_Cfam_GSD_1.0
Kcnk7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,421,720 - 7,424,649 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365993,864,097 - 3,866,994 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365993,864,110 - 3,866,998 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNK7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.118,644,038 - 8,648,132 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl18,645,231 - 8,647,963 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038105,938,769 - 105,942,856 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnk7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476720,796,809 - 20,799,915 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476720,796,733 - 20,799,915 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KCNK7
170 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
9 2 8 2 5 9 7 8 1 3

Sequence


Ensembl Acc Id: ENSSSCT00000014196   ⟹   ENSSSCP00000013810
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl26,659,054 - 6,662,288 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000078288   ⟹   ENSSSCP00000062375
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl26,659,054 - 6,661,980 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000103909   ⟹   ENSSSCP00000077181
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl26,659,054 - 6,661,902 (+)Ensembl
RefSeq Acc Id: XM_003122534   ⟹   XP_003122582
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.126,657,841 - 6,662,445 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003122582 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000013810
  ENSSSCP00000013810.2
  ENSSSCP00000062375.1
  ENSSSCP00000077181.1
  ENSSSCP00015026612.1
  ENSSSCP00025047386.1
  ENSSSCP00040037661.1
  ENSSSCP00060039253.1
RefSeq Acc Id: XP_003122582   ⟸   XM_003122534
- UniProtKB: F1RRI8 (UniProtKB/TrEMBL),   A0A8D0TL24 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000062375   ⟸   ENSSSCT00000078288
Ensembl Acc Id: ENSSSCP00000013810   ⟸   ENSSSCT00000014196
Ensembl Acc Id: ENSSSCP00000077181   ⟸   ENSSSCT00000103909
Protein Domains
Potassium channel


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012986 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015049819 UniProtKB/TrEMBL
  ENSSSCG00025076434 UniProtKB/TrEMBL
  ENSSSCG00040063030 UniProtKB/TrEMBL
  ENSSSCG00060066458 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000014196 ENTREZGENE
  ENSSSCT00000014196.5 UniProtKB/TrEMBL
  ENSSSCT00000078288.2 UniProtKB/TrEMBL
  ENSSSCT00000103909.1 UniProtKB/TrEMBL
  ENSSSCT00015066400.1 UniProtKB/TrEMBL
  ENSSSCT00025105856.1 UniProtKB/TrEMBL
  ENSSSCT00040085989.1 UniProtKB/TrEMBL
  ENSSSCT00060090745.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
InterPro 2pore_dom_K_chnl UniProtKB/TrEMBL
  2pore_dom_K_chnl_TASK UniProtKB/TrEMBL
  2pore_dom_K_chnl_TWIK UniProtKB/TrEMBL
  K_chnl_dom UniProtKB/TrEMBL
KEGG Report ssc:100512393 UniProtKB/TrEMBL
NCBI Gene KCNK7 ENTREZGENE
PANTHER POTASSIUM CHANNEL SUBFAMILY K MEMBER 7 UniProtKB/TrEMBL
  PTHR11003 UniProtKB/TrEMBL
Pfam Ion_trans_2 UniProtKB/TrEMBL
PIRSF K_channel_subfamily_K_type UniProtKB/TrEMBL
PRINTS 2POREKCHANEL UniProtKB/TrEMBL
  TWIKCHANNEL UniProtKB/TrEMBL
Superfamily-SCOP Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A5G2QF72_PIG UniProtKB/TrEMBL
  A0A8D0TL24 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FE95_PIG UniProtKB/TrEMBL
  F1RRI8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:89374 ENTREZGENE