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Gene: MTPAP (mitochondrial poly(A) polymerase) Sus scrofa

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Symbol:

MTPAP

Name:

mitochondrial poly(A) polymerase

RGD ID:

13874478

Description:

ENCODES a protein that exhibits ATP binding (inferred); identical protein binding (inferred); magnesium ion binding (inferred); INVOLVED IN histone mRNA catabolic process (inferred); mitochondrial RNA 3'-end processing (inferred); RNA metabolic process (inferred); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN intracellular membrane-bounded organelle (inferred); mitochondrion (inferred); nucleoplasm (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

mitochondrial poly(A) RNA polymerase; poly(A) RNA polymerase, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	40,764,396 - 40,789,061 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	40,764,098 - 40,869,608 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	45,197,646 - 45,225,482 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	fundus dystrophy		ISO	MTPAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinal dystrophy	ClinVar	PMID:25741868
MTPAP	Pig	genetic disease		ISO	MTPAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
MTPAP	Pig	spastic ataxia		ISO	MTPAP (Homo sapiens)	8554872	ClinVar Annotator: match by term: Spastic ataxia	ClinVar	PMID:25741868
MTPAP	Pig	spastic ataxia 4		ISO	MTPAP (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:20970105 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	melanoma		ISO	MTPAP (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22535842

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	spastic ataxia 4		ISO	MTPAP (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	deoxynivalenol	increases expression	EXP		6480464	deoxynivalenol results in increased expression of MTPAP mRNA	CTD	PMID:35307453

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	histone mRNA catabolic process	involved_in	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	mitochondrial RNA 3'-end processing	involved_in	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	RNA 3'-end processing	involved_in	IBA	FB:FBgn0024360 more ...	150520179		GO_Central	GO_REF:0000033
MTPAP	Pig	RNA metabolic process	involved_in	IEA	ARBA:ARBA00028985	150520179		UniProt	GO_REF:0000117

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	intracellular membrane-bounded organelle	located_in	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	mitochondrion	located_in	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	mitochondrion	is_active_in	IBA	PANTHER:PTN000263477 and UniProtKB:Q9NVV4	150520179		GO_Central	GO_REF:0000033
MTPAP	Pig	nucleoplasm	located_in	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
MTPAP	Pig	ATP binding	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	identical protein binding	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	magnesium ion binding	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	manganese ion binding	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	poly(A) RNA polymerase activity	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	poly(A) RNA polymerase activity	enables	IBA	FB:FBgn0024360 more ...	150520179		GO_Central	GO_REF:0000033
MTPAP	Pig	protein binding	enables	ISO	UniProtKB:Q13137	9068941	PMID:33961781	IntAct	PMID:33961781
MTPAP	Pig	protein binding	enables	ISO	UniProtKB:Q13137 more ...	9068941	PMID:21903422	IntAct	PMID:21903422
MTPAP	Pig	protein homodimerization activity	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107
MTPAP	Pig	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	150520179		UniProt	GO_REF:0000043
MTPAP	Pig	UTP binding	enables	IEA	UniProtKB:Q9NVV4 and ensembl:ENSP00000263063	150520179		Ensembl	GO_REF:0000107

PMID:14681463	PMID:22297614	PMID:30032202

MTPAP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	40,764,396 - 40,789,061 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	40,764,098 - 40,869,608 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	45,197,646 - 45,225,482 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MTPAP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	30,309,801 - 30,349,278 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	30,309,801 - 30,374,448 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	30,598,730 - 30,638,207 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	30,641,765 - 30,678,254 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	30,641,764 - 30,678,254	NCBI
Celera	10	30,363,675 - 30,403,196 (-)	NCBI		Celera
Cytogenetic Map	10	p11.23	NCBI
HuRef	10	30,317,607 - 30,357,218 (-)	NCBI		HuRef
CHM1_1	10	30,598,696 - 30,638,239 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	30,340,827 - 30,380,279 (-)	NCBI		T2T-CHM13v2.0

Mtpap
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	4,375,573 - 4,399,888 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	4,375,592 - 4,397,330 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	4,375,589 - 4,399,888 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	4,375,592 - 4,397,330 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	4,375,590 - 4,397,328 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	4,375,590 - 4,396,782 (+)	NCBI		MGSCv36	mm8
Celera	18	4,420,341 - 4,442,079 (+)	NCBI		Celera
Cytogenetic Map	18	A1	NCBI
cM Map	18	2.77	NCBI

Mtpap
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	58,015,979 - 58,036,735 (-)	NCBI		GRCr8
mRatBN7.2	17	53,320,739 - 53,341,500 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	53,320,741 - 53,341,538 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	56,487,928 - 56,508,696 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	60,490,865 - 60,511,635 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	54,652,729 - 54,673,519 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	56,046,507 - 56,068,185 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	56,046,509 - 56,068,125 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	54,083,463 - 54,105,399 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	61,847,984 - 61,868,867 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	61,859,420 - 61,879,734 (-)	NCBI
Celera	17	49,316,835 - 49,337,431 (-)	NCBI		Celera
Cytogenetic Map	17	q12.1	NCBI

Mtpap
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	21,767,547 - 21,794,885 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	21,768,011 - 21,792,481 (+)	NCBI	ChiLan1.0	ChiLan1.0

MTPAP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	42,973,311 - 43,020,922 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	42,978,638 - 43,026,256 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	30,463,414 - 30,500,245 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	30,818,591 - 30,854,542 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	30,818,599 - 30,854,542 (-)	Ensembl	panpan1.1		panPan2

MTPAP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	16,666,742 - 16,695,753 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	16,666,749 - 16,695,709 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	14,162,942 - 14,191,932 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	14,907,486 - 14,936,502 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	14,907,486 - 14,936,473 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	14,352,326 - 14,381,322 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	14,238,649 - 14,267,606 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	14,511,673 - 14,540,814 (-)	NCBI		UU_Cfam_GSD_1.0

Mtpap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	9,285,880 - 9,314,897 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936613	3,836,308 - 3,866,542 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936613	3,836,461 - 3,865,240 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MTPAP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	29,918,227 - 29,966,806 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	29,919,008 - 29,951,006 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	35,995,452 - 36,027,820 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mtpap
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624805	2,651,121 - 2,672,899 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624805	2,651,464 - 2,727,894 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in MTPAP
4015 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3


RefSeq Transcripts	NM_001317082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001299270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002336108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK234687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU929949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01109151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GU345804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000012060 ⟹ ENSSSCP00000011752

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	40,764,396 - 40,789,061 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000048465 ⟹ ENSSSCP00000054344

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	10	40,764,396 - 40,793,398 (+)	Ensembl

RefSeq Acc Id:

NM_001317082 ⟹ NP_001304011

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	40,764,417 - 40,789,023 (+)	NCBI

Sequence:

show sequence

ATGGCGGCCCGCGGCGTGGGACTGTTGACCCGGTTGTCCCTCGGTGCTCAGAGAAATCAAGTCCAGCGTGCTCTCCGTAGGCTTCTCAGTTGTCCGGGAACGGTGGCCGCAGACCTCAGGAGAGAAGA
GCAGTTCTCGGGGAGCGCGGAGACAGGCTCTGAAGACAGGATTCCCAAGAAGAGATTCTCAGAGGTGCAAGAAGAAAGACGAGAACAGGCCCAGCGGACAGTGTTAATCCACTGCCCAAATAAAATCA
GTGAGAAGAAGTTTCTCCAGTATTTATCCCAACACGGACCCGTTAACAGCCACTTCTTCTATGAAAGCTTTGGTCTTTATGCCGTTGTAGAATTTTGTCAGAAGGAAAGTGTAGCTTCACTGCAGAGT
GTGACTCGTACGCCAAGCCGGGGCGCAGAGGCTGCAATTCCGTTCAGGTCCCGGTACTTCAGTTTAAAGCTGAGGAATCCATCAAGCCAGCCTTCGGAACAGTCAAGTGTTCAGTGTAGTAATCAGTC
CTCTCCTTCAAGCAAGAAGCTTTTTGAATTACTTTGTTGTGCAGAAAGTGTAGATGATCAGCTGACTGCCCTCCTGAAGACATTCCAGCTCACAGAAGAGAACACCAAACTCCGCTATCTCACCTGCT
CTCTTATTGAGGACATAGCGGCTGCATATTTTCCAGGCTGTGCAGTCAGACCCTTTGGCTCTTCAGTGAACAGTTTTGGGAAATTAGGATGTGATTTGGACATGTTTTTGGATCTGGATGAAATTGGA
AACTTTAGTGCCCAAAAGGCTTCAGGAAATTTTCTGATGGAATTTCAAGTGAAAAATGTTCCTTCGGAAAGAATTGTGACTCAGAAGATCCTGTCTGTGATAGGGGAGTGCCTTGATCACTTTGGCCC
CGGCTGTGTCGGGGTGCAGAAGATCCTAAATGCTCGGTGTCCCCTGGTCAGGTTCTCGCACCAGGCCTCCGGGTTTCAGTGTGATTTGACCACTAACAATAGGATCGCCTTGAAAGTTCTGAGCTGCT
TTATTCTGTACGGTGCCCTGGACTCACGCGTGAGAGCCTTGGTGTTCAGCATCCGATGCTGGGCTCGAGTGCATTCGTTAACAAGTAGTATTCCTGGTGCTTGGATTACAAATTTCTCCCTCACCATG
ATGGTCATCTTCTTTCTCCAGAGGAGATCACCCCCTATTCTTCCAACACTAGACTCCTTGAAATCCCTAGCAGATGCAGAAGATAAGTGTATAATAGAAGGCCACAACTGTACATTTGTTCGTGACTT
GAATAAAATTAAACCTTCAGGAAACACAGAATCACTAGAATTACTACTGAAAGAATTTTTTGAATATTTTGGAAATTTCGCTTTCAATAAAAATTCCATAAATATTCGACAGGGAGGGGAACAAAACA
AACCTGAATCTTCTCCACTGCACATTCAGAATCCATTTGAAACCTCTCTCAACATAAGCAAAAATGTAAGTCAAAGCCAGCTGCAAAAATTTGTAGAGCTGGCCAGAGAAAGCGCCTGGATTTTACAT
CAGGAAGTTAAAGAACGCCAGTCAAGCAACCAGCCCTGGGGGCTGGCCACCCTGCTGCTGCCTTCTGTAGCAAATAACATATCTTTTGTCAAGAAGCGAAAGAAGCCTGCAAGTGAAAGAATTAAAAA
CTTGTTGGAATCCATAAAAAGTAGCAGCACAGAACATCCCACAGACACCAATGGGAAAAGAGCTGTTAACACTCAGGCATGATGGTGGCTGCTTTGCCTTCAGAACTGGTTTTTGTCCTGTACGATGA
TCTCTGGACCTGGAAGAACTGCGTGAAACTCACAGATCACCCTGTCTTCTGCTGTCTCTCTTCATGATCTCTTCTCTTTGGGCCCCTTAACCTGGTCCGATGTCCTGCGACATTTTTGGTGTGATGCC
CAGGGATGCTGTGGTGAAACGTTAGCCGAGGGAACAGGTGACAGAAGATTGGAATGTGCTTCAGATAAACCATACAGATCAGTTTTAGAATCAAACCGTTGTTGATTCCACATCAGTCCCAGGGTGTA
AATCATT

hide sequence

RefSeq Acc Id:

XR_001299270

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	40,764,098 - 40,797,964 (+)	NCBI

Sequence:

show sequence

GTTATGGTTTATTATATTCTTAGGTTCCCAAGTCAGTGCTCTTTCCTCCTGCCCTTGCTCTCTG
GTTCTGTTTTCACGGCTATGTGAAAGAGTAGGTGGTGTGCTCGTTCTCTGGGGGTCTTCTTTTGGAGAACCCGGAGAGCGGAAATAAAACGTGTTGAAAACCTCAGCCATCCCCATTCAAACCGCGTC
TCAATTTCTTTTACACGTGAACGTTTTTCTCCTACTTTGACCCTCTAGGCTTCCCATCCTCTGGGCCTCGGCGCACATGCGCAGACGCCCGGCGACCTCCTGGCTCGGAGTCTCCGCCGCTCTGACAA
TGGCGGCCCGCGGCGTGGGACTGTTGACCCGGTTGTCCCTCGGTGCTCAGAGAAATCAAGTCCAGCGTGCTCTCCGTAGGCTTCTCAGTTGTCCGGGAACGGTGGCCGCAGACCTCAGGAGAGAAGAG
CAGTTCTCGGGGAGCGCGGAGACAGGCTCTGAAGACAGGATTCCCAAGAAGAGATTCTCAGAGGTGCAAGAAGAAAGACGAGAACAGGCCCAGCGGACAGTGTTAATCCACTGCCCAAATAAAATCAG
TGAGAAGAAGTTTCTCCAGTATTTATCCCAACACGGACCCGTTAACAGCCACTTCTTCTATGAAAGCTTTGGTCTTTATGCCGTTGTAGAATTTTGTCAGAAGGAAAGTGTAGCTTCACTGCAGAGTG
TGACTCGTACGCCAAGCCGGGGCGCAGAGGCTGCAATTCCATTCAGGTCCCGGTACTTCAGTTTAAAGTTGAGGAATCCATCAAGCCAGCCTTCGGAACAGTCAAGTGTTCAGTGTAGTAATCAGTCC
TCTCCTTCAAGCAAGAAGCTTTTTGAATTACTTTGTTGTGCAGAAAGTGTAGATGATCAGCTGACTGCCCTCCTGAAGACATTCCAGCTCACAGAAGAGAACACCAAACTCCGCTATCTCACCTGCTC
TCTTATTGAGGACATAGCGGCTGCATATTTTCCAGGCTGTGCAGTCAGACCCTTTGGCTCTTCAGTGAACAGTTTTGGGAAATTAGGATGTGATTTGGACATGTTTTTGGATCTGGATGAAATTGGAA
ACTTTAGTGCCCAAAAGGCTTCAGGAAATTTTCTGATGGAATTTCAAGTGAAAAATGTTCCTTCGGAAAGAATTGTGACTCAGAAGATCCTGTCTGTGATAGGGGAGTGCCTTGATCACTTTGGCCCC
GGCTGTGTCGGGGTGCAGAAGATCCTAAATGCTCGGTGTCCCCTGGTCAGGTTCTCGCACCAGGCCTCCGGGTTTCAGTGTGATTTGACCACTAACAATAGGATCGCCTTGAAAAGTTCCGAGCTGCT
TTATCTGTACGGTGCCCTGGACTCACGCGTGAGAGCCTTGGTGTTCAGCATCCGATGCTGGGCTCGAGTGCATTCGTTAACAAGTAGTATTCCTGGTGCTTGGATTACAAATTTCTCCCTCACCATGA
TGGTCATCTTCTTTCTCCAGAGGAGATCACCCCCTATTCTTCCAACACTAGACTCCTTGAAATCCCTAGCGGATGCAGAAGATAAGTGTATAATAGAAGGCCACAACTGTACATTTGTTCGTGACTTG
AATAAAATTAAACCTTCAGGAAACACAGAATCACTAGAATTACTACTGAAAGAATTTTTTGAATATTTTGGAAATTTCGCTTTCAATAAAAATTCCATAAATATTCGACAGGGAAGGGAACAAAACAA
ACCTGAATCTTCTCCACTGCACATTCAGAATCCATTTGAAACCTCTCTCAACATAAGCAAAAATGTAAGTCAAAGCCAGCTGCAAAAATTTGTAGAGCTGGCCAGAGAAAGCGCCTGGATTTTACATC
AGGAAGTTAAAGAACGCCAGTCAAGCAACCAGCCCTGGGGGCTGGCCACCCTGCTGCTGCCTTCTGTAGCAAATAACATATCTTTTGTCAAGAAGCGAAAGAAGCCTGCAAGTGAAAGAATTAAAAAC
TTGTTGGAATCCATAAAAAGTAGCAGCACAGAACATCCCACAGACACCAATGGGAAAAGAGCTGTTAACACTCAGGCATGATGGTGGCTGCTTTGCCTTCAGAACTGGTTTTTGTCCTGTACGATGAT
CTCTGGACCTGGAAGAACTGCGTGAAACTCACAGATCACCCTGTCTTCTGCTGTCTCTCTTCATGATCTCTTCTCTTTGGGCCCCTTAACCTGGTCCGATGTCCTGCGACATTTTTGGTCTGATGCCC
AGGGATGCTGTGGTGAAACGTTAGCCGAGGGAACAGGTGACAGAAGATTGGAATGTGCTTCAGATAAACCATACAGATCAGTTTTAGAATCAAACCGTTGTTGATTCCACATCAGTCCCAGGGTGTAA
ATCATTGAAAAGAACTCTCTAGGGTGAGAACAGAATTAGACTGTTTCAAGTCACTTCATGTTCCTAGAGATTCCTTGGCTTTAGAAGGACAGCTCTGTTCAGTTCCATACGGCCTGCTGGTGCCAGAG
TAGGAACATGCTCCCTTTGCATGCCTAAGTCTAAACCTGCGCAGTGAGCATCTGTGGCAGAAGCGGCAGAAAGAGCAGCCGAGCCAGGTGGTGGCTCTCTCCACTCGCCAGAGCTTGGTACTCAGCTG
GTGAGTAGCTGTCATTGCGTCTTGATGCAGCGAAACCATCCAAAATGCTGTCACAAGGAGGAAATCTTTTCTGCCCAAGATGATCAGAAAAGGCTTCATCCATCACATAGAATAGGATAGGTCTTGAC
GGGAATTGTCATCTGTGTCGTCCAGAGCCAGGGCCTGGAGTTTGTCATTCTGGGAGCAGAAGTGTAAATAGGAGCCAGGAGGAGGAGGCGTGTTTGGAGACCTGGCCGGCCAGGCCAGCAGGGATGGG
ATTTTGCTCTGGTACTCAGGGAATCAAGGCTGAGGGAGATGGTGAGACTGCCCATGGTGAGCCAAGGAGGTGGTGTGTTTTCAGCGGGAAAGCGTTGAAGGTTTCTGTGTTACGGAAAAGTAGAAGCT
AAAGCACTGCTTTAGATGACTCATCTGTTAGCAAGCAGTTACCGAGCACTGCTCCTTTTTTTCTTAGCAGATTTGAGTACCTTAGGTCCCATCATTAAATTCGGTAAAATTTGGCTGTGAAATTTTCC
ACAAAGGTCCAGAAGCTGATTTTCATATACCTCACAGGAGTCTTTCTCTAATGTTTAACAAGTAAGTAAAGTTTAAGAGGTTTAAAGCGATCATCAGGAAATATCATCAGGTAATGACATATAATTTT
ATGTAAAGCCTTACTAATGAGAAATTCTTTGCAGTATATACTTGGAAAAGATTGAAAACATGACCAGAAATCACTTTTCACCTTGGGATGATGTTGGAAAATTTATTTTAAATACTTGAAAGGCTTAT
TTCAGTTTCCATGCTGAGTCCAATTACTTGTGGGTACATATTCCAACGAATATAAACATTACAGCGTTCCTCTGGAATTCCCATGGAGCAGCTCCCAGAAAATGTCTACTTTAGATAGAATCTTTAAT
CTGTAATCTCTATGATATAGGATATATAAATCACCACATTTTAAAAATATACTACTCATTTTTTTTTTTTTTGGTCTTTTGTCTTTTTTTTTTTTAGGGCTGCACTCGTGGCACATGGAAGTTCCCAG
GCTAGGGGTCCAATTGCAGCTGTAGCTGCCGGCCTACACCACAGCCACAGCAACTCGGGATCCGAGCCACCTCTGCAACCTTCACTACAGCTCACAGCAACACTGGATCCTTAACCCACTGATCGACG
CCAGGGATCAAACCCCTGTCCTCATGGATGCCAGTCAGGTTCATTAACTGTTGAGCTATGACGGGAACTCTGGAAAAATACACTACTCATATTTTAAATGTGATCCCTCATGTTACCTGTGCGTATGC
ATGTCCACCCATCGTTAAGAACTCAGTGGAGTCAAGGACGTATTAAATGCATTATTCACTTTTTCTCTCTACCCTTCGATGAATCCATTTAAACTCTCATGGCAAAGTTTCTAAGCTTTGAGGATGTG
ATGCTGAGATGTTTTAAAGAGAATATTGGAAAGAGAGGACTTGAAACCATAAATGTTACACGGTGAAGATACATGTATGATAAAATAGCTAATTTGGAATAGGCCAAGTCTAAGTAAATGAAAAAATA
TAAATTATAGATTGTTCTTTCTTCTGGGTTTATTTTGAAGTATGGCACATTGGAAACTTAAACTATCATCGATGCTGTCAAATGAAATGGAACAAATTAACAAAAGATTACGAATGAGGTCTGTGTTA
CGTTCTGTGTCACCACAGCTCATTAACATGTGACACTTGTCAAGTGCAGTGAAAGTTTGTACATTTTGAAGTTTTTCCTATTGCAGAGTTACTGGAATAGGATTTAGACTAATGTAACTTAATGATTA
GTGTTTTATAATTAATCTTTGCTAAGCTTAACACGTGGGCTTGGAGAATGATGAGAAGTGACATTAACATCTCTTTTACAAACTCTTAAAAACTGAGTCGAAGGTGGATTAATGAGGCTGGCTGATGT
TGCAATGGAATTTGAAGCTCAAAAATCTGTTTTTTTAAAATCCATGTAAAATGTAAATTATACTTCTGTAGACATACATATCACTATAAAACTAGAGCAAGCTTGGCCTTATTTTTTTTTTTTTAGCA
GTTGATTTTGGTGACTTTAAAAGGGTTGTTTGTATGTGACAGCATCCCCCCTTTCTCCCAATTCTCTAATTGAACCTACAGTAATAAGCATCCTTGGAGTTTCCCTGCTTTTCTTCTTGGCATCACTG
GTTATAAAGCTCAGTTACCAGTACTGAGTGGTTTCCTTTAGCTTTATATAATTGCGTTTTTAAAAAAGGTTTACAGGAGATCCTGTCATGGCTCAGCAGAAGTGAATCTGACTAGCATTCATGAGGAC
GCAAGTTCAGTCCCTGGCCTTTCTCAGTGAGTTAAGGATCCGGTGTCGCAGTGAGCTATGGTGTAGGTCACAGACGCTGCTCAGATCTCATGTTGCTGTGGCTGTGGCATAGGCCAATGGCTACAGCT
CCAATTTGACCCCTAGCCCAGAGACAGGTGCAGCCCTAAAAAGAAAAAAAAAAGTAAAAAAATTTTTCACATTTTATATTTTTACTTGATCCCTTCTTTTTTTTTAAGAAATGATGACTAAGAGTAAC
GGTGAGCAGTGGTACTTGACTTACCGGTTGTTTGGTGATAAGATAGACTCAAATAATCAGTTTTTATAGAAGACTGATTTCAAGAGCTTCACCCTCACCTCTGGACAGAGGACTGTCAAATCACTATT
TTAGTCCCACCGCTAGAACTTCATCATTATTGTGTATTGGACTTTGTGCTTCAGCTCCAAATCGGCAGTTTAAATGAAAATTTTCTTCCTTAAAATTGGCTAACCTCTTAATTTGCCTATTTCTGTTG
TTGGTACCATTATTCTCAGCCACTTGAGTTCAAACTCTGAGATCCTTTTAGACTCCTTTTTTCTCCTGTTTAATTAATCTCTCTCTGTTTCTGTTGGCATTAGCTTAGTTCACGTCAGTACCTATCTT
CTAATACACCAGTCTTTTGGCTTGTTTCCCAGCCCAGTGACCCCTTCTGTGATCCATGCGAACCAATTTTCTAAGGAGTAGGAGTCAAGAAAGTACGTTTTATGGTAAATTAATATTAAATTATATGT
GTTTGTTTATTGTAAAGATACCTTGGAATTGTACAGAGCTTTAAGGTCATTCTAAATATCAGGGAACATCTTTGTGTAGGTGTCCAAAACAGACACCGACTGAAGGTTCTAATTAGTCAAAAGCACTG
GTTTTTTCTCTAACATCAAACTGTTTATACACACTATTGACTTCTTAAAGTTTTCAAACTTCTCTAGTAATAACAATCCCAAAATACTGGTACAACGGAGTCACTCATTCAGCAAATATTTCCCCGGA
TTGCTGTGTGCCAGACACTCTCCAACTGAGACGTAAATACCAAGAGAGACAAAAATTTTGAATTGCTGGAAAAAATGATGTTTATTCCTGAAGAGCGAGGCTTAGTGTAAGGGTAACAGTTTTGCGTA
TGTATCAATTAATAAAGGTGCAACCAATTAAAATCCTGTAAGGATTTTTAAAAGAAACTTGAAACTCATTGGAAGTATATGAGGAAGAATAAATATATAAAAGTAGCCAGAAGAAATTTTTTTTTTTT
TTTTCTTTTTAGGGCCACACTTGTAGTATATAGAAGTTCCCAGGCTAGGGGTCCAATCTGAGCTACAGCTGTCTGCCACAGCCACAGCCACGACTCAGGATCTGAGCCGTGTCTGCAGCCTACACCAC
AGCTCACGGCAACACTGGATCTTTAACCCACTGATCAAGGCCAGGGATTGAATCTGCATCCTCTTGGATACCAGTCAGGTTCATAACCATTGAGCCACTATAGAAACTCCAAAAAATTGTTTTATTTA
ATAAGTAACATTAAAATATAAGGCAAGGTAATTTAAACAATACTGCTGGCTTGAGATAGACAAATCTTTGGATCAGTACAGAAATATACTCAAACTATATATGGGAATTTATAGTAATAAAAGGCAAT
ATTTCAAGTCAATAGAAAGATGGATTATTCAGTAAATTGTGTTGGGACAACTGGTAGCTATTGGAAAAGAAAAGTTTGACCCTAGTCTTACTCTTTACCCAAATAAATTCCAGGTGGGTCTGAATCTA
AATGTGAGGCGGGGGAGTGAAATCATAAAGTGCAAAAGAAATCATAGATGAATATTATAAACCTAGGGTAGGGCAGGGTGCCTTTTCAAAGCATGACATGCATTTATGAAAGAATATATTGATAAGTT
TGACTACTTTAGAATGGAAAACTATACCACAAAGCAACCATAAATAAAGTTTAAAATTCTAATACTAATGAAAAGGGCCAATTTTTCTAATGAGCTCTACAAATCTAAAAGTAGTAGGCAAAGACAAC
TTACCTATTATGAAGAATTTGAACACAAGCAAAAGTAAACTGAAAAGTATTAGGAACTTGCATAAATCCATCACCTCTTTCAGTAATTAACTCATGGCAATTGGCTTTAATCTATAACTGTATTTATT
TACCCCACCTGTATTATTTTAAGGATATTCCAGTCATACTATCATTTTATCTGTAAATATGTCCATTCCCTCCAGAACGATAAGAACTTTTCTCTAACATAATCACAAATCATTATCAAACCTACGTA
GAACAAACGCAAGCAATAATTCTCTAATATCTTCATATCCATTCAGAGTTCAGGTTTCCAGTTGTGTTACGGATCTCACAGTTGTTTTTTCCCAAAGCACGTTTATTGGGGTCCGGTCATAGTCCCCA
CCTTGTGATTGGTTGATGCATTTCTGAAGTCTCTTGAATTTTTAGGTTTCTGCTTCATATCTCTTTTTTTGTCTTTTTGCAAGTTTTTGAAGATACCGAGTTGTTTTTCTTATAGCGTTTCCTGCAAC
ATGGATTGTGCTGATTTTGTCAGCGCCTGTGATGATGTGCTGTGGAGTCATTCTTTAACTGTGTCTAATTTTTTAAACCCTTTCATTGAATTCTCAATTCCAGGAGGTTTTGTTTGTTTGTTTCCAGT
TCTAGAATTTCTATTTGGTACTTAAAAAAAATTTTTTTTTCTAATTTTCTGACAAATTTCTCAGGCACAACTTTGATTTTCTTATGAAGTCTGTCTAATAACTTGATTATCTGGTCGGCTCCTGTTTT
CCATGATGTTGTTGACCCCTCTCCTTGTGTACCTAACTGTTGTTACCCTGTGTGCTGACCTGGTAGGTGAAAAACAGTAGATGACGTGAGGGAGGGCGATGCTGATCTTCCTTCAGGATGGATGTATT
TTTGCTTCCGGAAGGTGGGTAGGAGGACTTAGGATCCTGAATCACCGTGATCTAGAAAGAAAGGGCATGAGATTTTGAAGTTGGATTGAGTTCCAGATTCTGGTTCATCTTTCCTCTCAGAATGTTAG
CCTCACCCAGAGCCAGGAGCGTTTACCAGGCCTCTTTTCCTTGATAGACCTTGAGCTCCAGTTCTTGTCCCGTTTCCCCGTGACCTTTCTGAAAGCTCTGCTCAGCAGATGTCCAAATGGGCTCACCT
GTGGAGGTGTGCTTCTCCACGGCCCTGCAAGTCTTCACTGCCCTAGTAGCATCTGGATGCTCTCAGGCAACTGCTTCTTGTTTTGCCTGGCGGAAAGTTGTCGTCAGTGAGAGAGGTGGTAGGTACTA
CCTAGTCTGATGTTACCGGAAGCCGGTGAGCTCTTTTTGATTCCAGCTTCTGATCCCTTATGTATATATATTTGTAATTTTATAGGACTGATGTATACTGTTCCTGTGGTTTACTTCCTTGCAAGGGA
CTTTCACATGTTGAGTTGGGCTTTGTATGTATAGCAGCGCAGACACCTGGCTGGAGGGAAAGCCTGGTTCACCACTGAGGAAGCAAGGTACTGCATATGTTGCTGGGCTCTGCTTCAGAAATCGCCAG
CTTTTATTTCTGGATTGTGATTTCCTCATAGAGGATCTTGTACATGCCAATTCAAAGTTTAAATTTATGCCATGTGTGAATGAGTGGCAAAGCGCCCAAGTAAGAATGGGGAAAAATATCTTCTTTTT
CCAATCATATTCAGACACCTCAAACAACTAGGAAATACACTTTTTCTTCCAGCTTTCCAAAATATTTATCTGGGCTGAGGTCAAGAATGAAAGCATTTTAGGCCAAAGTGCATCTTGAAAATTTTATG
ATTTATAAAAGAGTTTAAAAATTCTCTTTTGAATTAAAGCCTATGTTATTATCAGAGTGTTTTATTTATGAACACACAATATTAGTGAATTTATATATCAGTGAAATATTTTAAGTGTATCTTTTCTG
TTATTTCTCTAATATTTGATTATTTCATGTTTGTGGTTTATTAGTTTAATTATCAGCATATATTTGTTTAGGTAACAGAGAAGCAGCAATTAACAATATCTATATTATTTTGAGTTAGTTTTCAACTT
GTATTTATAATTTGCTACATATATTCTACCATTTATATATTTCCAGGAACTTTAATTTAGGTCTCTAAATATTTAATAAAATCATTTTGCAGACTAAATTATTTGATGTTTTTATCTTGATTACTCTG
AACAAAGCCAGTACTTCAAGTTTATCCTTGATGCTTCAGGGTGAAAATTGTGTTAAGTAGTATTTGAATTTAAATGTGGTTTTAAAATGTTTCTTAATTCTAAAGCCCTTTGTAGTTCCCATTTTCTA
AGTAATATTAGCTATATTTGATCTTCTGATGAAGAGAGACTTGACTATGATTAAATATGTGCAGTACCATCCTGGAATAAATTTTTATTCATAGATTAATAAAATATGTGCAGCATGATTTAGGAGAA
AATATTTTAGGCCATTAAATTTAGTTACATAAGCTACAGTCTGTTTTAAATTCTGTGCAACAAAATCTGTTTTGCTTTAAAAATAAAATGTTCATTACACTGGGAAATGTGGAATATTAGTTTTTCAA
GGCCATCAGAAGCATCTCCAATCACATATTTAGGAAATTTTAAAAATACTAGTTTTAGCCTGTCAACTTAATGGCATTTGTTATTATTGTCTAATTTTCTTATCTGTACTTAAAAGCCTTAAGAATGC
TTAATCTTTGA

hide sequence

RefSeq Acc Id:

XR_002336108

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	10	40,764,098 - 40,869,608 (+)	NCBI

Sequence:

show sequence

GTTATGGTTTATTATATTCTTAGGTTCCCAAGTCAGTGCTCTTTCCTCCTGCCCTTGCTCTCTG
GTTCTGTTTTCACGGCTATGTGAAAGAGTAGGTGGTGTGCTCGTTCTCTGGGGGTCTTCTTTTGGAGAACCCGGAGAGCGGAAATAAAACGTGTTGAAAACCTCAGCCATCCCCATTCAAACCGCGTC
TCAATTTCTTTTACACGTGAACGTTTTTCTCCTACTTTGACCCTCTAGGCTTCCCATCCTCTGGGCCTCGGCGCACATGCGCAGACGCCCGGCGACCTCCTGGCTCGGAGTCTCCGCCGCTCTGACAA
TGGCGGCCCGCGGCGTGGGACTGTTGACCCGGTTGTCCCTCGGTGCTCAGAGAAATCAAGTCCAGCGTGCTCTCCGTAGGCTTCTCAGTTGTCCGGGAACGGTGGCCGCAGACCTCAGGAGAGAAGAG
CAGTTCTCGGGGAGCGCGGAGACAGGCTCTGAAGACAGGATTCCCAAGAAGAGATTCTCAGAGGTGCAAGAAGAAAGACGAGAACAGGCCCAGCGGACAGTGTTAATCCACTGCCCAAATAAAATCAG
TGAGAAGAAGTTTCTCCAGTATTTATCCCAACACGGACCCGTTAACAGCCACTTCTTCTATGAAAGCTTTGGTCTTTATGCCGTTGTAGAATTTTGTCAGAAGGAAAGTGTAGCTTCACTGCAGAGTG
TGACTCGTACGCCAAGCCGGGGCGCAGAGGCTGCAATTCCATTCAGGTCCCGGTACTTCAGTTTAAAGTTGAGGAATCCATCAAGCCAGCCTTCGGAACAGTCAAGTGTTCAGTGTAGTAATCAGTCC
TCTCCTTCAAGCAAGAAGCTTTTTGAATTACTTTGTTGTGCAGAAAGTGTAGATGATCAGCTGACTGCCCTCCTGAAGACATTCCAGCTCACAGAAGAGAACACCAAACTCCGCTATCTCACCTGCTC
TCTTATTGAGGACATAGCGGCTGCATATTTTCCAGGCTGTGCAGTCAGACCCTTTGGCTCTTCAGTGAACAGTTTTGGGAAATTAGGATGTGATTTGGACATGTTTTTGGATCTGGATGAAATTGGAA
ACTTTAGTGCCCAAAAGGCTTCAGGAAATTTTCTGATGGAATTTCAAGTGAAAAATGTTCCTTCGGAAAGAATTGTGACTCAGAAGATCCTGTCTGTGATAGGGGAGTGCCTTGATCACTTTGGCCCC
GGCTGTGTCGGGGTGCAGAAGATCCTAAATGCTCGGTGTCCCCTGGTCAGGTTCTCGCACCAGGCCTCCGGGTTTCAGTGTGATTTGACCACTAACAATAGGATCGCCTTGAAAAGTTCCGAGCTGCT
TTATCTGTACGGTGCCCTGGACTCACGCGTGAGAGCCTTGGTGTTCAGCATCCGATGCTGGGCTCGAGTGCATTCGTTAACAAGTAGTATTCCTGGTGCTTGGATTACAAATTTCTCCCTCACCATGA
TGGTCATCTTCTTTCTCCAGAGGAGATCACCCCCTATTCTTCCAACACTAGACTCCTTGAAATCCCTAGCGGATGCAGAAGATAAGTGTATAATAGAAGGCCACAACTGTACATTTGTTCGTGACTTG
AATAAAATTAAACCTTCAGGAAACACAGAATCACTAGAATTACTACTGAAAGAATTTTTTGAATATTTTGGAAATTTCGCTTTCAATAAAAATTCCATAAATATTCGACAGGGAAGGGAACAAAACAA
ACCTGAATCTTCTCCACTGCACATTCAGAATCCATTTGAAACCTCTCTCAACATAAGCAAAAATGTAAGTCAAAGCCAGCTGCAAAAATTTGTAGAGCTGGCCAGAGAAAGCGCCTGGATTTTACATC
AGGAAGTTAAAGAACGCCAGTCAAGCAACCAGCCCTGGGGGCTGGCCACCCTGCTGCTGCCTTCTGTAGCAAATAACATATCTTTTGTCAAGAAGCGAAAGAAGCCTGCAAGTGAAAGAATTAAAAAC
TTGTTGGAATCCATAAAAAGTAGCAGCACAGAACATCCCACAGACACCAATGGGAAAAGAGCTGTTAACACTCAGGCATGATGGTGGCTGCTTTGCCTTCAGAACTGGTTTTTGTCCTGTACGATGAT
CTCTGGACCTGGAAGAACTGCGTGAAACTCACAGATCACCCTGTCTTCTGCTGTCTCTCTTCATGATCTCTTCTCTTTGGGCCCCTTAACCTGGTCCGATGTCCTGCGACATTTTTGGTCTGATGCCC
AGGGATGCTGTGGTGAAACGTTAGCCGAGGGAACAGGTGACAGAAGATTGGAATGTGCTTCAGATAAACCATACAGATCAGTTTTAGAATCAAACCGTTGTTGATTCCACATCAGTCCCAGGGTGTAA
ATCATTGAAAAGAACTCTCTAGGGTGAGAACAGAATTAGACTGTTTCAAGTCACTTCATGTTCCTAGAGATTCCTTGGCTTTAGAAGGACAGCTCTGTTCAGTTCCATACGGCCTGCTGGTGCCAGAG
TAGGAACATGCTCCCTTTGCATGCCTAAGTCTAAACCTGCGCAGTGAGCATCTGTGGCAGAAGCGGCAGAAAGAGCAGCCGAGCCAGGTGGTGGCTCTCTCCACTCGCCAGAGCTTGGTACTCAGCTG
ATGTCTCATCCAAAAAAGTGAATGTAGCCAGGGGAAATCGTGTCCCCTTGGCTCCTGAAGTAGGAAGGATACAGCCTCTTCATGCCAGAAGCAAAGGAAGCCATGGAAGCCATGGAGGACAATGGAAG
TGGTGGAAGCAGTAGAAGCAATGAAGGCAGTGGAGGCCAATGGAGGTCATGGAGGCAGTGGAGGCACTGGAAGTGGTGGAAGCAATAGAATAAATGGAGGCAAAGGAGGCCATGGACAACAATGGAAG
TAACAGAGGCCATGGAAGCAGTGGAGGCAGTGGAGGCAAGGGAGGTAATGGAGGCCATGGAGGCAGGGGAGGTAATGGAGGCAGTGAAAGTAGTGGAGGCAGTGAAGGCTGTGGAGGCAGTGGAAGCA
ATGGAGACGGTGGAAGCCATGGAAGGATTCGAGGCAATGAAGACAGTGGAGGCCGTGGAGGCCATCCAAGCAGTGGAAATAATGGAAGCCGTGGAGGCAGTGGAAACCAGGAGCTTTGTGAGAGACTA
AGTGCCTCTCTCTGTCTGAGCAGAATCTGTCTTGTACAGATTCTCGGACTGGCCACAGACACCCATCAACTGGGTCTAGGAGTGTGTCTGTATTACACGACTTTGCTTGTGAGCGAGTTCAGGAAAGT
CCGAGAGTTGGGCTTAATAGAACAGCTCCTTCCCCTTGACTTGAGCAAGGTGGTCTAATGACTCTCAGGGTCTGTTCACACATGGTCCTGTCCCCTGCTGCGTATACCTGACCTTGCCCTGCCCACCA
CCTTGAGCTCAGGTGGGCTGCAGGTAGAGCTTTAGCCAATGAAATGTGAGCAAAAGCCTGCAAGTGCTGGTGTGCACTTTGCTACAACTCGTCCTCCTGACAGCGATGGTGGATGAACCCAGAGCCTG
GGTCCCTGAGTGAAAGTAGTCTGAGCTGGTTTGCCCTGGACAGATGGTGTGAGCAAGAAATTAGCTTTGTGTTCAACCACTGAGATTCTGTGGTCATTTAGAACTGTAATTAAACCCAGGCCATGTTG
GGCCATGAAATAATATGGGGACTCAAAATCCAGGCTTATTTTAAATTTGACACAGAACCCAGGAGCCACAAAAGAGAAAGTATAAAGATGACCGCATTAAAAAAAATTTTTTTTCTTTTTATGGCCAC
ACCTGTAGCATATGGAAGTTCCAGGGCCAGGGGTCGAATCAGAGCTGCAGCTGCAGACCTACATCACAGCCACAGCAACGCCAGATCTGAGCCACATTTGCAAACTACGCCACAGCTTGAGGCAACAC
CTTATCCTTAACTGACTGAGCGAGGACAGGGATCGAACCTGAAACCTCATGGTTCCTAGTTGGACTCGTTAACCACTGAGCCACAACGGGAATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTC
TTTTTAGGGCCAAGCCCTCAGCACATGGAGGTTCCCAGGCTAGGGGTCCAGTCAGAGCTGCAGCCACTGGCCTATGCCACAGCCACAGCAACACCAGATCCGAGCTATGTCTGCGACCCACACCACAG
CTCATGGCAACACCAGATCCTCAAACCACTGAGCGAGGCCAGGGGTTGAACCCGAAACCTCATAGTTCCTAGTTGGATTCATTAACCACTGAGCCACAACGGGAACTCCCTGTCAAGTTCTCAATCCA
CTAAGCCACAGTGGGAACTCCTAGATGACTACATTTTTAAAAGTCAAATTTCCTAAATGGCAAAAGAGTCCCCATACAAAAGGCAAAAGAGGAAAAGTACACTGAGGGAGAATTGTTTGCATCTCCTG
GACTAAAGGCTTGCTTCTCTAGGGTACACGTGGCCTTTGTACTTGCTGTTTCTCTTCTGAAAATGCTGTTCCAACAGAGAGACTCATGACCCAGCCTCTCACCTGCTTTCAGCATTTGTTCAAATGCC
ATCTTCTCCGAGAGGCTTTCCTAAACGTGCAGCCTCCTCACGCAGCCTCTAGCCTTTCCCTGCTTTATTCTTCTGATAATACAGTTGTCCAATGCTGTGTCCGTTTATTTACTTATTTACATTTGTCC
GTCTCCATCCCCAGGTTGTTCTCTTGGTCTGTTTGCTTTACATGCTGTTTCATCTCCAGCACACAGAAAAGTGTTAGGCGCTCAGCAAGTATTTGTCAAATGGATTTACCACATCCGTTACGTGAAAA
AAGTACAAAACAGTTATGAATTTTATGGTATTATTTGTGTAAAAGGGATTTTTGCCCCCTCTTACCTAATCTAGACTGTTGGAATTCAACAGGACAAACAAATAATTTTATCGACAAATCCATCATAA
GGACATAGAGTAGAGGGAGAATCTTTAGATTAAAAGAGACTTAAAAGACATATCAACAACCACAATATGTGCATCTTATTTGCATCCTGATTCAAATAAAGTTTTTAAAAAGGCTGACATTTATGAAG
CAATTGGAAATCCGAATACTGCCTGGATGTCTTATGTTATTAAGGAAACATTGCAAATTTTTACGTTATGGTTATTGTGTTTTGGAAATGTTTTAAAAGTCTTCATCCTTTAGATATACACAGAGAAA
TATTTACGGATGAAATGCTATGATGTTTGGGAGGGAACAGGTGAGGTGTGGCTAAAACAAGCCTGTTTTTGTTTTTGTTTTCCTTTTAGGGCCACACCTACACTGCAGCTCACAGCAACAACAGATCA
CTGACCCACTGAGCAGGCCAGGGATGAACCTGCATCCTCATGGATACTAGTCAGATTTGTTTCCACTGCGACACGATGGGAACTCACAAAACAGGTCTGTTGAGTTGACACTTCTTGAAGCAAAGAAA
TAGCAACATGAGATTCCACCATAGGATTCCATCTGCTTTGGTATACATTCATCATTTTCCACAGCAAAAGGTTACAAAGGAGGGAGTTCCCCTTGTGGCTCACCGGGTTATGAACCCAACTAGT

hide sequence


Protein RefSeqs	NP_001304011	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ADU33129	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000011752
	ENSSSCP00000011752.4
	ENSSSCP00015032351.1
	ENSSSCP00035016085.1
	ENSSSCP00040012504.1
	ENSSSCP00045018932.1
	ENSSSCP00060033233.1
	ENSSSCP00065023126.1

RefSeq Acc Id:

NP_001304011 ⟸ NM_001317082

- UniProtKB:

E7BXW8 (UniProtKB/TrEMBL), A0A8D1HJ06 (UniProtKB/TrEMBL), F1RWE3 (UniProtKB/TrEMBL), A0A8D1DW20 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAARGVGLLTRLSLGAQRNQVQRALRRLLSCPGTVAADLRREEQFSGSAETGSEDRIPKKRFSEVQEERREQAQRTVLIHCPNKISEKKFLQYLSQHGPVNSHFFYESFGLYAVVEFCQKESVASLQS
VTRTPSRGAEAAIPFRSRYFSLKLRNPSSQPSEQSSVQCSNQSSPSSKKLFELLCCAESVDDQLTALLKTFQLTEENTKLRYLTCSLIEDIAAAYFPGCAVRPFGSSVNSFGKLGCDLDMFLDLDEIG
NFSAQKASGNFLMEFQVKNVPSERIVTQKILSVIGECLDHFGPGCVGVQKILNARCPLVRFSHQASGFQCDLTTNNRIALKVLSCFILYGALDSRVRALVFSIRCWARVHSLTSSIPGAWITNFSLTM
MVIFFLQRRSPPILPTLDSLKSLADAEDKCIIEGHNCTFVRDLNKIKPSGNTESLELLLKEFFEYFGNFAFNKNSINIRQGGEQNKPESSPLHIQNPFETSLNISKNVSQSQLQKFVELARESAWILH
QEVKERQSSNQPWGLATLLLPSVANNISFVKKRKKPASERIKNLLESIKSSSTEHPTDTNGKRAVNTQA

hide sequence

Ensembl Acc Id:

ENSSSCP00000054344 ⟸ ENSSSCT00000048465

Ensembl Acc Id:

ENSSSCP00000011752 ⟸ ENSSSCT00000012060

Protein Domains

PAP-associated Poly(A) RNA polymerase mitochondrial-like central RL

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000011018	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015059841	UniProtKB/TrEMBL
	ENSSSCG00035030335	UniProtKB/TrEMBL
	ENSSSCG00040022292	UniProtKB/TrEMBL
	ENSSSCG00045016112	UniProtKB/TrEMBL
	ENSSSCG00060056450	UniProtKB/TrEMBL
	ENSSSCG00065038907	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000012060	ENTREZGENE
	ENSSSCT00000012060.5	UniProtKB/TrEMBL
	ENSSSCT00015080035.1	UniProtKB/TrEMBL
	ENSSSCT00035040195.1	UniProtKB/TrEMBL
	ENSSSCT00040029902.1	UniProtKB/TrEMBL
	ENSSSCT00045027407.1	UniProtKB/TrEMBL
	ENSSSCT00060076891.1	UniProtKB/TrEMBL
	ENSSSCT00065053191.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1410.10	UniProtKB/TrEMBL
	3.30.460.10	UniProtKB/TrEMBL
InterPro	IPR041252	UniProtKB/TrEMBL
	MTPAP-like_central	UniProtKB/TrEMBL
	NT_sf	UniProtKB/TrEMBL
	PAP_assoc	UniProtKB/TrEMBL
KEGG Report	ssc:100517235	UniProtKB/TrEMBL
NCBI Gene	MTPAP	ENTREZGENE
PANTHER	POLY A POLYMERASE CID PAP -RELATED	UniProtKB/TrEMBL
	POLY(A) RNA POLYMERASE, MITOCHONDRIAL	UniProtKB/TrEMBL
Pfam	MTPAP-like_central	UniProtKB/TrEMBL
	PAP_assoc	UniProtKB/TrEMBL
	PF17797	UniProtKB/TrEMBL
Superfamily-SCOP	PAP/OAS1 substrate-binding domain	UniProtKB/TrEMBL
	SSF81301	UniProtKB/TrEMBL
UniProt	A0A8D1DW20	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1HJ06	ENTREZGENE, UniProtKB/TrEMBL
	E7BXW8	ENTREZGENE, UniProtKB/TrEMBL
	F1RWE3	ENTREZGENE
UniProt Secondary	F1RWE3	UniProtKB/TrEMBL
VGNC ID	VGNC:96676	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM