OR2T32P (olfactory receptor family 2 subfamily T member 32 pseudogene) - Rat Genome Database

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Gene: OR2T32P (olfactory receptor family 2 subfamily T member 32 pseudogene) Homo sapiens
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Symbol: OR2T32P
Name: olfactory receptor family 2 subfamily T member 32 pseudogene
RGD ID: 1349717
HGNC Page HGNC:31254
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: OR2T33  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381248,083,633 - 248,084,596 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1248,083,634 - 248,084,596 (-)EnsemblGRCh38hg38GRCh38
GRCh371248,246,935 - 248,247,898 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361246,313,461 - 246,314,621 (-)NCBINCBI36Build 36hg18NCBI36
Celera1221,532,338 - 221,533,298 (-)NCBICelera
Cytogenetic Map1q44NCBI
HuRef1218,630,663 - 218,631,626 (-)NCBIHuRef
CHM1_11249,519,268 - 249,520,231 (-)NCBICHM1_1
T2T-CHM13v2.01247,509,682 - 247,510,644 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:194
Count of miRNA genes:130
Interacting mature miRNAs:132
Transcripts:ENST00000356294, ENST00000403423
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1 1 1
Low 1 5 274 4 33 4 54 8 95 4 277 280 1 49
Below cutoff 484 409 548 66 532 38 874 192 1958 58 420 558 31 204 581 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000403423
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1248,083,634 - 248,084,596 (-)Ensembl
RefSeq Acc Id: ENST00000642003
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1248,083,522 - 248,087,522 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC OR2T32P COSMIC
Ensembl Genes ENSG00000197067 Ensembl, ENTREZGENE
GTEx ENSG00000197067 GTEx
HGNC ID HGNC:31254 ENTREZGENE
Human Proteome Map OR2T32P Human Proteome Map
NCBI Gene 403241 ENTREZGENE
PharmGKB PA134982934 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-15 OR2T32P  olfactory receptor family 2 subfamily T member 32 pseudogene  OR2T32P  olfactory receptor, family 2, subfamily T, member 32 pseudogene  Symbol and/or name change 5135510 APPROVED