ARMC7 (armadillo repeat containing 7) - Rat Genome Database

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Gene: ARMC7 (armadillo repeat containing 7) Homo sapiens
Analyze
Symbol: ARMC7
Name: armadillo repeat containing 7
RGD ID: 1347915
HGNC Page HGNC:26168
Description: Predicted to be involved in RNA splicing and mRNA processing. Predicted to be part of spliceosomal complex; INTERACTS WITH 2-methylcholine; aristolochic acid A; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: armadillo repeat-containing protein 7; FLJ22160
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381775,109,969 - 75,130,272 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1775,109,952 - 75,130,272 (+)EnsemblGRCh38hg38GRCh38
GRCh371773,106,064 - 73,126,367 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361770,617,677 - 70,637,955 (+)NCBINCBI36Build 36hg18NCBI36
Build 341770,617,676 - 70,637,955NCBI
Celera1769,698,445 - 69,718,737 (+)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1768,515,672 - 68,536,048 (+)NCBIHuRef
CHM1_11773,170,585 - 73,190,860 (+)NCBICHM1_1
T2T-CHM13v2.01776,001,436 - 76,021,735 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:14702039   PMID:15489334   PMID:16189514   PMID:17207965   PMID:21832049   PMID:21988832   PMID:25416956   PMID:26472760   PMID:26627737   PMID:27107012   PMID:28514442   PMID:29892012  
PMID:30021884   PMID:30232004   PMID:30804394   PMID:31515488   PMID:32296183   PMID:32393512   PMID:33509932   PMID:33961781   PMID:34048709   PMID:34373451  


Genomics

Comparative Map Data
ARMC7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381775,109,969 - 75,130,272 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1775,109,952 - 75,130,272 (+)EnsemblGRCh38hg38GRCh38
GRCh371773,106,064 - 73,126,367 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361770,617,677 - 70,637,955 (+)NCBINCBI36Build 36hg18NCBI36
Build 341770,617,676 - 70,637,955NCBI
Celera1769,698,445 - 69,718,737 (+)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1768,515,672 - 68,536,048 (+)NCBIHuRef
CHM1_11773,170,585 - 73,190,860 (+)NCBICHM1_1
T2T-CHM13v2.01776,001,436 - 76,021,735 (+)NCBIT2T-CHM13v2.0
Armc7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911115,366,461 - 115,381,294 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11115,366,493 - 115,381,293 (+)EnsemblGRCm39 Ensembl
GRCm3811115,475,635 - 115,490,468 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11115,475,667 - 115,490,467 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711115,336,991 - 115,351,780 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611115,291,767 - 115,306,556 (+)NCBIMGSCv36mm8
Celera11127,242,563 - 127,257,337 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1180.84NCBI
Armc7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810101,222,056 - 101,238,598 (+)NCBIGRCr8
mRatBN7.210100,723,080 - 100,739,636 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10100,723,105 - 100,739,636 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10105,783,212 - 105,800,028 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010105,246,281 - 105,263,099 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010100,644,086 - 100,660,609 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010104,036,250 - 104,052,852 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10104,036,367 - 104,052,852 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010104,227,119 - 104,243,710 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,558,266 - 105,574,799 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110105,566,900 - 105,587,815 (+)NCBI
Celera1099,298,091 - 99,314,563 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Armc7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555532,002,388 - 2,010,619 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555532,002,636 - 2,010,619 (+)NCBIChiLan1.0ChiLan1.0
ARMC7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21991,148,733 - 91,169,496 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11795,971,782 - 95,992,529 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01769,056,295 - 69,077,026 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11774,612,558 - 74,632,854 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1774,612,558 - 74,632,854 (+)Ensemblpanpan1.1panPan2
ARMC7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl95,344,420 - 5,366,661 (-)EnsemblCanFam3.1canFam3CanFam3.1
Armc7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056025,981,694 - 5,991,300 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936594420,728 - 430,147 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936594420,701 - 430,265 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARMC7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl126,153,545 - 6,183,102 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1126,153,968 - 6,183,165 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2126,126,076 - 6,145,584 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARMC7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11646,533,762 - 46,557,907 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607717,310,778 - 17,338,714 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Armc7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248014,941,441 - 4,951,811 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248014,941,376 - 4,951,657 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ARMC7
14 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q24.3-25.3(chr17:69209079-83086677)x3 copy number gain See cases [RCV000052486] Chr17:69209079..83086677 [GRCh38]
Chr17:67205220..81044553 [GRCh37]
Chr17:64716815..78637842 [NCBI36]
Chr17:17q24.3-25.3		 pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3		 pathogenic
NM_014595.2(NT5C):c.579C>T (p.Ser193=) single nucleotide variant Malignant melanoma [RCV000071664] Chr17:75130515 [GRCh38]
Chr17:73126610 [GRCh37]
Chr17:70638205 [NCBI36]
Chr17:17q25.1		 not provided
NM_001304271.1(ARMC7):c.171+1964G>C single nucleotide variant Lung cancer [RCV000100649] Chr17:75112506 [GRCh38]
Chr17:73108601 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh38/hg38 17q24.3-25.3(chr17:69916435-83102552)x3 copy number gain See cases [RCV000143342] Chr17:69916435..83102552 [GRCh38]
Chr17:67912576..81048189 [GRCh37]
Chr17:65424171..78653717 [NCBI36]
Chr17:17q24.3-25.3		 pathogenic
GRCh37/hg19 17q25.1(chr17:72901452-73518861)x3 copy number gain not provided [RCV000585184] Chr17:72901452..73518861 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q24.2-25.3(chr17:64241326-81041938)x3 copy number gain See cases [RCV000447577] Chr17:64241326..81041938 [GRCh37]
Chr17:17q24.2-25.3		 pathogenic
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3 copy number gain See cases [RCV000447823] Chr17:42580684..81085615 [GRCh37]
Chr17:17q21.31-25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q24.2-25.3(chr17:67002415-81041938)x3 copy number gain See cases [RCV000512573] Chr17:67002415..81041938 [GRCh37]
Chr17:17q24.2-25.3		 pathogenic
GRCh37/hg19 17q25.1(chr17:72962625-73281784)x3 copy number gain not provided [RCV000683960] Chr17:72962625..73281784 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q25.1(chr17:73057756-73429731)x3 copy number gain not provided [RCV000683961] Chr17:73057756..73429731 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q24.1-25.3(chr17:63689671-81041938)x3 copy number gain not provided [RCV000683952] Chr17:63689671..81041938 [GRCh37]
Chr17:17q24.1-25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q24.1-25.2(chr17:64159738-74891024)x3 copy number gain not provided [RCV000762750] Chr17:64159738..74891024 [GRCh37]
Chr17:17q24.1-25.2		 likely pathogenic
GRCh37/hg19 17q24.3-25.1(chr17:70720436-73175266) copy number gain not provided [RCV000767767] Chr17:70720436..73175266 [GRCh37]
Chr17:17q24.3-25.1		 pathogenic
GRCh37/hg19 17q24.1-25.3(chr17:62778720-81041938)x3 copy number gain not provided [RCV000849900] Chr17:62778720..81041938 [GRCh37]
Chr17:17q24.1-25.3		 pathogenic
GRCh37/hg19 17q25.1(chr17:72945415-73414786)x3 copy number gain not provided [RCV001006917] Chr17:72945415..73414786 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q25.1(chr17:73049227-73533226) copy number loss not specified [RCV002052605] Chr17:73049227..73533226 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q25.1(chr17:73045938-73310951)x3 copy number gain not provided [RCV001827813] Chr17:73045938..73310951 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q25.1(chr17:72718277-74142256) copy number gain 7q11.23 microduplication syndrome [RCV003325440] Chr17:72718277..74142256 [GRCh37]
Chr17:17q25.1		 pathogenic
NM_024585.4(ARMC7):c.35G>A (p.Gly12Glu) single nucleotide variant Inborn genetic diseases [RCV003297736] Chr17:75110323 [GRCh38]
Chr17:73106418 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.593G>A (p.Arg198His) single nucleotide variant Inborn genetic diseases [RCV003197123] Chr17:75129034 [GRCh38]
Chr17:73125129 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.298G>A (p.Val100Ile) single nucleotide variant Inborn genetic diseases [RCV002859733] Chr17:75128739 [GRCh38]
Chr17:73124834 [GRCh37]
Chr17:17q25.1		 likely benign
NM_024585.4(ARMC7):c.151G>C (p.Glu51Gln) single nucleotide variant Inborn genetic diseases [RCV003012872] Chr17:75110522 [GRCh38]
Chr17:73106617 [GRCh37]
Chr17:17q25.1		 likely benign
NM_024585.4(ARMC7):c.536G>A (p.Arg179Gln) single nucleotide variant Inborn genetic diseases [RCV002693218] Chr17:75128977 [GRCh38]
Chr17:73125072 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.380C>T (p.Pro127Leu) single nucleotide variant Inborn genetic diseases [RCV002984012] Chr17:75128821 [GRCh38]
Chr17:73124916 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.53A>G (p.Gln18Arg) single nucleotide variant Inborn genetic diseases [RCV002669383] Chr17:75110341 [GRCh38]
Chr17:73106436 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.332A>G (p.Asn111Ser) single nucleotide variant Inborn genetic diseases [RCV002878063] Chr17:75128773 [GRCh38]
Chr17:73124868 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q25.1(chr17:72864876-73328878)x1 copy number loss not provided [RCV003222940] Chr17:72864876..73328878 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.440G>A (p.Arg147His) single nucleotide variant Inborn genetic diseases [RCV003203469] Chr17:75128881 [GRCh38]
Chr17:73124976 [GRCh37]
Chr17:17q25.1		 uncertain significance
NM_024585.4(ARMC7):c.465G>C (p.Arg155Ser) single nucleotide variant Inborn genetic diseases [RCV003193545] Chr17:75128906 [GRCh38]
Chr17:73125001 [GRCh37]
Chr17:17q25.1		 uncertain significance
GRCh37/hg19 17q25.1(chr17:72875847-73484159)x3 copy number gain not specified [RCV003987236] Chr17:72875847..73484159 [GRCh37]
Chr17:17q25.1		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2150
Count of miRNA genes:853
Interacting mature miRNAs:1023
Transcripts:ENST00000245543, ENST00000579096, ENST00000581078, ENST00000582136, ENST00000584947
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH15966  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371773,126,103 - 73,126,240UniSTSGRCh37
Build 361770,637,698 - 70,637,835RGDNCBI36
Celera1769,718,480 - 69,718,617RGD
Cytogenetic Map17q25.1UniSTS
HuRef1768,535,791 - 68,535,928UniSTS
GeneMap99-GB4 RH Map17475.5UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 907 663 770 159 1424 118 1912 143 1136 314 994 1393 55 274 1073 2
Low 1532 2326 956 465 524 347 2444 2052 2598 105 466 220 120 1 930 1714 4 2
Below cutoff 2 2 1 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001304271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001304272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001304273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002958068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC022211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC111186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK300997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW081695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF512472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI826938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR748475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000245543   ⟹   ENSP00000245543
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,109,969 - 75,130,272 (+)Ensembl
RefSeq Acc Id: ENST00000579096
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,114,291 - 75,129,451 (+)Ensembl
RefSeq Acc Id: ENST00000581078   ⟹   ENSP00000462962
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,109,952 - 75,129,170 (+)Ensembl
RefSeq Acc Id: ENST00000582136   ⟹   ENSP00000462642
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,109,978 - 75,114,826 (+)Ensembl
RefSeq Acc Id: ENST00000584947   ⟹   ENSP00000462939
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1775,110,181 - 75,114,830 (+)Ensembl
RefSeq Acc Id: NM_001304271   ⟹   NP_001291200
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,109,969 - 75,130,272 (+)NCBI
CHM1_11773,170,550 - 73,190,860 (+)NCBI
T2T-CHM13v2.01776,001,436 - 76,021,735 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001304272   ⟹   NP_001291201
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,109,969 - 75,114,820 (+)NCBI
CHM1_11773,170,550 - 73,175,424 (+)NCBI
T2T-CHM13v2.01776,001,436 - 76,006,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001304273   ⟹   NP_001291202
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,109,969 - 75,114,820 (+)NCBI
CHM1_11773,170,550 - 73,175,424 (+)NCBI
T2T-CHM13v2.01776,001,436 - 76,006,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_024585   ⟹   NP_078861
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,109,969 - 75,130,272 (+)NCBI
GRCh371773,106,047 - 73,126,360 (+)NCBI
Build 361770,617,677 - 70,637,955 (+)NCBI Archive
Celera1769,698,445 - 69,718,737 (+)RGD
HuRef1768,515,672 - 68,536,048 (+)ENTREZGENE
CHM1_11773,170,550 - 73,190,860 (+)NCBI
T2T-CHM13v2.01776,001,436 - 76,021,735 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_078861   ⟸   NM_024585
- Peptide Label: isoform 1
- UniProtKB: B4DVA4 (UniProtKB/Swiss-Prot),   Q9H6L4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001291200   ⟸   NM_001304271
- Peptide Label: isoform 2
- UniProtKB: Q9H6L4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001291202   ⟸   NM_001304273
- Peptide Label: isoform 4
- UniProtKB: J3KST7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001291201   ⟸   NM_001304272
- Peptide Label: isoform 3
- UniProtKB: J3KTE5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000462962   ⟸   ENST00000581078
RefSeq Acc Id: ENSP00000462642   ⟸   ENST00000582136
RefSeq Acc Id: ENSP00000462939   ⟸   ENST00000584947
RefSeq Acc Id: ENSP00000245543   ⟸   ENST00000245543

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9H6L4-F1-model_v2 AlphaFold Q9H6L4 1-198 view protein structure

Promoters
RGD ID:6793748
Promoter ID:HG_KWN:27080
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_024585,   UC002JMV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361770,617,359 - 70,617,859 (+)MPROMDB
RGD ID:6793750
Promoter ID:HG_KWN:27081
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid,   NB4
Transcripts:UC010DGA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361770,621,921 - 70,622,421 (+)MPROMDB
RGD ID:7236269
Promoter ID:EPDNEW_H23880
Type:initiation region
Name:ARMC7_1
Description:armadillo repeat containing 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381775,109,971 - 75,110,031EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:26168 AgrOrtholog
COSMIC ARMC7 COSMIC
Ensembl Genes ENSG00000125449 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000245543 ENTREZGENE
  ENST00000245543.6 UniProtKB/Swiss-Prot
  ENST00000581078 ENTREZGENE
  ENST00000581078.1 UniProtKB/Swiss-Prot
  ENST00000582136 ENTREZGENE
  ENST00000582136.5 UniProtKB/TrEMBL
  ENST00000584947 ENTREZGENE
  ENST00000584947.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000125449 GTEx
HGNC ID HGNC:26168 ENTREZGENE
Human Proteome Map ARMC7 Human Proteome Map
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Armadillo UniProtKB/Swiss-Prot
  ARMC7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:79637 UniProtKB/Swiss-Prot
NCBI Gene 79637 ENTREZGENE
PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR46263 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Arm UniProtKB/Swiss-Prot
PharmGKB PA134901380 PharmGKB
SMART ARM UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ARMC7_HUMAN UniProtKB/Swiss-Prot
  B4DVA4 ENTREZGENE
  J3KST7 ENTREZGENE, UniProtKB/TrEMBL
  J3KTE5 ENTREZGENE, UniProtKB/TrEMBL
  Q9H6L4 ENTREZGENE
UniProt Secondary B4DVA4 UniProtKB/Swiss-Prot