OR7E90P (olfactory receptor family 7 subfamily E member 90 pseudogene) - Rat Genome Database

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Gene: OR7E90P (olfactory receptor family 7 subfamily E member 90 pseudogene) Homo sapiens
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Symbol: OR7E90P
Name: olfactory receptor family 7 subfamily E member 90 pseudogene
RGD ID: 1344790
HGNC Page HGNC:14733
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: OR7E123P; OST705
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382158,874,593 - 158,875,766 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2158,874,642 - 158,875,670 (+)EnsemblGRCh38hg38GRCh38
GRCh372159,731,105 - 159,732,278 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362159,439,351 - 159,440,524 (+)NCBINCBI36Build 36hg18NCBI36
Celera2153,347,890 - 153,349,063 (+)NCBICelera
Cytogenetic Map2q24.1NCBI
HuRef2151,619,211 - 151,620,384 (+)NCBIHuRef
CHM1_12159,737,365 - 159,738,538 (+)NCBICHM1_1
T2T-CHM13v2.02159,336,690 - 159,337,863 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:147
Interacting mature miRNAs:147
Transcripts:ENST00000454836
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 1 1
Low 5 10 2 2 1 29 32 4 85 12 1 1 17
Below cutoff 228 106 184 36 62 9 784 109 742 46 404 181 28 86 439 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000454836
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2158,874,642 - 158,875,670 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC OR7E90P COSMIC
Ensembl Genes ENSG00000188668 Ensembl, ENTREZGENE
GTEx ENSG00000188668 GTEx
HGNC ID HGNC:14733 ENTREZGENE
Human Proteome Map OR7E90P Human Proteome Map
NCBI Gene 79537 ENTREZGENE
PharmGKB PA32726 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-15 OR7E90P  olfactory receptor family 7 subfamily E member 90 pseudogene  OR7E90P  olfactory receptor, family 7, subfamily E, member 90 pseudogene  Symbol and/or name change 5135510 APPROVED