Zfp414 (zinc finger protein 414) - Rat Genome Database

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Gene: Zfp414 (zinc finger protein 414) Mus musculus
Analyze
Symbol: Zfp414
Name: zinc finger protein 414
RGD ID: 1332570
MGI Page MGI
Description: Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Is expressed in several structures, including brain; genitourinary system; heart; hemolymphoid system gland; and liver. Orthologous to human ZNF414 (zinc finger protein 414).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610030H11Rik; MGC49274; RIKEN cDNA 0610030H11 gene; zinc finger, C2H2 type containing protein; Znf414
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391733,848,066 - 33,850,690 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1733,848,064 - 33,850,753 (+)EnsemblGRCm39 Ensembl
GRCm381733,629,092 - 33,631,716 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1733,629,090 - 33,631,779 (+)EnsemblGRCm38mm10GRCm38
MGSCv371733,766,047 - 33,768,656 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361733,235,790 - 33,238,399 (+)NCBIMGSCv36mm8
Celera1736,384,469 - 36,387,081 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15112104   PMID:15572693   PMID:15618518   PMID:15782199   PMID:16141072   PMID:16141073   PMID:21267068  
PMID:21677750   PMID:38355793  


Genomics

Comparative Map Data
Zfp414
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391733,848,066 - 33,850,690 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1733,848,064 - 33,850,753 (+)EnsemblGRCm39 Ensembl
GRCm381733,629,092 - 33,631,716 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1733,629,090 - 33,631,779 (+)EnsemblGRCm38mm10GRCm38
MGSCv371733,766,047 - 33,768,656 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361733,235,790 - 33,238,399 (+)NCBIMGSCv36mm8
Celera1736,384,469 - 36,387,081 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
ZNF414
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38198,509,678 - 8,514,167 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl198,509,678 - 8,514,167 (-)EnsemblGRCh38hg38GRCh38
GRCh37198,574,562 - 8,579,051 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36198,482,219 - 8,485,032 (-)NCBINCBI36Build 36hg18NCBI36
Celera198,433,126 - 8,436,712 (-)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef198,230,896 - 8,234,482 (-)NCBIHuRef
CHM1_1198,574,528 - 8,578,114 (-)NCBICHM1_1
T2T-CHM13v2.0198,497,262 - 8,501,751 (-)NCBIT2T-CHM13v2.0
Zfp414
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8715,122,408 - 15,125,115 (+)NCBIGRCr8
mRatBN7.2714,420,232 - 14,422,939 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl714,420,165 - 14,438,166 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx717,428,898 - 17,431,594 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0719,293,945 - 19,296,640 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0717,174,488 - 17,177,183 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0718,497,795 - 18,500,492 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl718,497,807 - 18,500,417 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0718,675,379 - 18,678,092 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4716,131,618 - 16,134,227 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1716,131,617 - 16,134,226 (+)NCBI
Celera713,318,965 - 13,321,574 (+)NCBICelera
Cytogenetic Map7q13NCBI
Znf414
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955563920,935 - 923,304 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955563920,801 - 923,423 (+)NCBIChiLan1.0ChiLan1.0
ZNF414
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22013,178,415 - 13,182,439 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11912,295,073 - 12,300,020 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0197,797,356 - 7,801,278 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1198,641,552 - 8,648,950 (-)NCBIpanpan1.1PanPan1.1panPan2
ZNF414
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12053,047,820 - 53,050,840 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2053,035,396 - 53,051,458 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,847,002 - 52,851,778 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02053,574,027 - 53,578,803 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2053,569,464 - 53,578,770 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12052,775,825 - 52,780,592 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02053,222,165 - 53,226,911 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02053,453,322 - 53,458,100 (-)NCBIUU_Cfam_GSD_1.0
Znf414
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118212,536,317 - 212,539,831 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365885,295,855 - 5,298,850 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365885,294,957 - 5,298,856 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl270,796,822 - 70,802,237 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1270,795,864 - 70,802,968 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF414
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.167,861,058 - 7,864,913 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607412,396,498 - 12,400,064 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf414
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248281,260,509 - 1,264,841 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248281,261,430 - 1,264,696 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1086
Count of miRNA genes:526
Interacting mature miRNAs:637
Transcripts:ENSMUST00000073570, ENSMUST00000164636, ENSMUST00000165504, ENSMUST00000166627, ENSMUST00000169781, ENSMUST00000170225, ENSMUST00000172455
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172971116434754437Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
BE632205  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381733,631,438 - 33,631,648UniSTSGRCm38
MGSCv371733,768,383 - 33,768,593UniSTSGRCm37
Celera1736,386,808 - 36,387,018UniSTS
Cytogenetic Map17B2UniSTS
Whitehead/MRC_RH17487.37UniSTS
0610030H11Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381733,631,298 - 33,631,677UniSTSGRCm38
MGSCv371733,768,243 - 33,768,622UniSTSGRCm37
Celera1736,386,668 - 36,387,047UniSTS
Cytogenetic Map17B2UniSTS
cM Map17 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_034153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_128537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF528163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI466623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI561611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI837261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI844570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY665714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC116933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC119044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE632205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY737447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT033847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX218166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000073570   ⟹   ENSMUSP00000073259
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,848,064 - 33,850,753 (+)Ensembl
GRCm38.p6 Ensembl1733,629,090 - 33,631,779 (+)Ensembl
Ensembl Acc Id: ENSMUST00000165504   ⟹   ENSMUSP00000130881
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,848,403 - 33,848,978 (+)Ensembl
GRCm38.p6 Ensembl1733,629,429 - 33,630,004 (+)Ensembl
Ensembl Acc Id: ENSMUST00000166627   ⟹   ENSMUSP00000129423
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,848,064 - 33,850,690 (+)Ensembl
GRCm38.p6 Ensembl1733,629,090 - 33,631,716 (+)Ensembl
Ensembl Acc Id: ENSMUST00000169781
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,849,175 - 33,849,745 (+)Ensembl
GRCm38.p6 Ensembl1733,630,201 - 33,630,771 (+)Ensembl
Ensembl Acc Id: ENSMUST00000170225   ⟹   ENSMUSP00000127118
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,848,095 - 33,850,437 (+)Ensembl
GRCm38.p6 Ensembl1733,629,121 - 33,631,463 (+)Ensembl
Ensembl Acc Id: ENSMUST00000172455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,848,075 - 33,850,664 (+)Ensembl
GRCm38.p6 Ensembl1733,629,101 - 33,631,690 (+)Ensembl
Ensembl Acc Id: ENSMUST00000234535
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,848,101 - 33,848,855 (+)Ensembl
GRCm38.p6 Ensembl1733,629,127 - 33,629,881 (+)Ensembl
RefSeq Acc Id: NM_026712   ⟹   NP_080988
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,848,066 - 33,850,690 (+)NCBI
GRCm381733,629,092 - 33,631,716 (+)ENTREZGENE
MGSCv371733,766,047 - 33,768,656 (+)RGD
Celera1736,384,459 - 36,387,086 (+)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_034153
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,848,066 - 33,850,690 (+)NCBI
GRCm381733,629,092 - 33,631,716 (+)ENTREZGENE
Celera1736,384,459 - 36,387,086 (+)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_080988   ⟸   NM_026712
- UniProtKB: Q9DCK4 (UniProtKB/Swiss-Prot),   Q8CHU9 (UniProtKB/Swiss-Prot),   Q14A93 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000127118   ⟸   ENSMUST00000170225
Ensembl Acc Id: ENSMUSP00000073259   ⟸   ENSMUST00000073570
Ensembl Acc Id: ENSMUSP00000129423   ⟸   ENSMUST00000166627
Ensembl Acc Id: ENSMUSP00000130881   ⟸   ENSMUST00000165504
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DCK4-F1-model_v2 AlphaFold Q9DCK4 1-299 view protein structure

Promoters
RGD ID:13675576
Promoter ID:EPDNEW_M21937
Type:multiple initiation site
Name:Zfp414_1
Description:Mus musculus zinc finger protein 414 , transcript variant 1,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381733,629,092 - 33,629,152EPDNEW
RGD ID:6828917
Promoter ID:MM_KWN:23110
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000073570,   UC008BYW.1,   UC008BYY.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361733,765,926 - 33,766,492 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915641 AgrOrtholog
Ensembl Genes ENSMUSG00000032739
  ENSMUSG00000073423 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000073570 ENTREZGENE
  ENSMUST00000073570.12 UniProtKB/Swiss-Prot
  ENSMUST00000165504.2 UniProtKB/TrEMBL
  ENSMUST00000166627 ENTREZGENE
  ENSMUST00000166627.8 UniProtKB/Swiss-Prot
  ENSMUST00000170225.3 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ZN414 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf-C2H2_ribbon UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:328801 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1915641 ENTREZGENE
NCBI Gene Zfp414 ENTREZGENE
PANTHER PTHR21695 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 414 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zfp414 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E9Q4H9_MOUSE UniProtKB/TrEMBL
  E9Q9N0_MOUSE UniProtKB/TrEMBL
  Q14A93 ENTREZGENE, UniProtKB/TrEMBL
  Q8CHU9 ENTREZGENE
  Q9DCK4 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8CHU9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-21 Zfp414  zinc finger protein 414  0610030H11Rik  RIKEN cDNA 0610030H11 gene  Symbol and/or name change 5135510 APPROVED
2024-08-21 0610030H11Rik  RIKEN cDNA 0610030H11 gene  Zfp414  zinc finger protein 414  Symbol and/or name change 5135510 APPROVED
2015-05-05 Zfp414  zinc finger protein 414  Zfp414  zinc finger protein 414  Data merged from RGD:1556996 737654 PROVISIONAL