Krt13 (keratin 13) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Krt13 (keratin 13) Mus musculus
Analyze
Symbol: Krt13
Name: keratin 13
RGD ID: 1332221
MGI Page MGI
Description: Predicted to enable structural molecule activity. Involved in regulation of translation in response to stress. Predicted to be located in extracellular exosome and intermediate filament cytoskeleton. Predicted to be active in keratin filament. Is expressed in several structures, including alimentary system; lower urinary tract; salivary gland primordium; sensory organ; and skin. Used to study white sponge nevus. Human ortholog(s) of this gene implicated in white sponge nevus 2. Orthologous to human KRT13 (keratin 13).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 47 kDa cytokeratin; CK-13; CK13; cytokeratin 13; cytokeratin-13; K13; keratin complex 1, acidic, gene 13; keratin, type I cytoskeletal 13; keratin-13; Krt-1.1; Krt-1.13; Krt1-1; Krt1-13
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,008,153 - 100,012,392 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11100,008,153 - 100,012,392 (-)EnsemblGRCm39 Ensembl
GRCm3811100,117,327 - 100,121,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,117,327 - 100,121,566 (-)EnsemblGRCm38mm10GRCm38
MGSCv371199,978,910 - 99,982,809 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361199,933,686 - 99,937,585 (-)NCBIMGSCv36mm8
Celera11110,733,979 - 110,737,878 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
acrylamide  (ISO)
afimoxifene  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
arotinoid acid  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
bleomycin A2  (EXP)
C60 fullerene  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chromium(6+)  (EXP)
chrysene  (EXP)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
cycloheximide  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
diethylstilbestrol  (EXP)
dimethylarsinic acid  (EXP)
diuron  (ISO)
fulvestrant  (ISO)
genistein  (EXP)
glycidyl methacrylate  (ISO)
glyphosate  (ISO)
hydroquinone  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosomorpholine  (ISO)
ozone  (EXP)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
PCB138  (ISO)
pentane-2,3-dione  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (EXP)
SB 431542  (ISO)
simvastatin  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (EXP)
tamoxifen  (EXP,ISO)
tricetin  (ISO)
trichloroethene  (ISO)
troglitazone  (ISO)
withaferin A  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Nonepidermal members of the keratin multigene family: cDNA sequences and in situ localization of the mRNAs. Knapp B, etal., Nucleic Acids Res 1986 Jan 24;14(2):751-63.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. BAC contig from a 3-cM region of mouse chromosome 11 surrounding Brca1. Pershouse M, etal., Genomics 2000 Oct 1;69(1):139-42.
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Keratin 13 point mutation underlies the hereditary mucosal epithelial disorder white sponge nevus. Richard G, etal., Nat Genet 1995 Dec;11(4):453-5.
11. The genomic organization of type I keratin genes in mice. Sato H, etal., Genomics 1999 Mar 15;56(3):303-9.
12. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:1380418   PMID:1695590   PMID:7518402   PMID:7525098   PMID:7535287   PMID:9665399   PMID:10227293   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11591653   PMID:12466305  
PMID:12477932   PMID:14517554   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16831889   PMID:17116754   PMID:20818173   PMID:20930145   PMID:21267068   PMID:21565611  
PMID:21677750   PMID:21873635   PMID:25123441   PMID:25377219   PMID:25968320   PMID:26063791   PMID:27889896   PMID:28378742   PMID:28973166   PMID:29181608   PMID:29459677   PMID:30153454  
PMID:30237242   PMID:30457570   PMID:31269445   PMID:32098917   PMID:32286221   PMID:32325033   PMID:32674056   PMID:32758484   PMID:34111600   PMID:35426961   PMID:36178196   PMID:39181129  


Genomics

Comparative Map Data
Krt13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,008,153 - 100,012,392 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11100,008,153 - 100,012,392 (-)EnsemblGRCm39 Ensembl
GRCm3811100,117,327 - 100,121,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,117,327 - 100,121,566 (-)EnsemblGRCm38mm10GRCm38
MGSCv371199,978,910 - 99,982,809 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361199,933,686 - 99,937,585 (-)NCBIMGSCv36mm8
Celera11110,733,979 - 110,737,878 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1163.41NCBI
KRT13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381741,500,981 - 41,505,612 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1741,500,981 - 41,505,705 (-)EnsemblGRCh38hg38GRCh38
GRCh371739,657,233 - 39,661,864 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361736,910,759 - 36,915,391 (-)NCBINCBI36Build 36hg18NCBI36
Build 341736,910,759 - 36,915,391NCBI
Celera1736,310,464 - 36,315,096 (-)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1735,420,855 - 35,425,487 (-)NCBIHuRef
CHM1_11739,892,545 - 39,897,177 (-)NCBICHM1_1
T2T-CHM13v2.01742,356,534 - 42,361,165 (-)NCBIT2T-CHM13v2.0
Krt13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81085,552,287 - 85,556,499 (-)NCBIGRCr8
mRatBN7.21085,051,887 - 85,056,099 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1085,051,889 - 85,056,084 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1090,069,852 - 90,074,085 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01089,568,242 - 89,572,454 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01084,960,188 - 84,964,400 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01088,032,130 - 88,036,040 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1088,032,130 - 88,036,040 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01087,824,805 - 87,828,715 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,057,240 - 89,061,150 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11089,071,609 - 89,075,520 (-)NCBI
Celera1083,771,488 - 83,775,398 (-)NCBICelera
Cytogenetic Map10q31NCBI
LOC100977112
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21923,479,137 - 23,483,831 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11725,369,282 - 25,373,914 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01715,811,095 - 15,815,783 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11716,028,747 - 16,033,434 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1716,028,747 - 16,033,434 (+)Ensemblpanpan1.1panPan2
KRT13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1921,261,233 - 21,265,564 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl921,156,045 - 21,265,564 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha920,723,008 - 20,727,339 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0921,982,165 - 21,986,496 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1920,768,175 - 20,772,506 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0921,034,197 - 21,038,528 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0921,137,994 - 21,142,325 (+)NCBIUU_Cfam_GSD_1.0
Krt13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560220,651,184 - 20,655,477 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493649016,419,662 - 16,423,949 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100515166
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11221,139,296 - 21,143,556 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21221,475,570 - 21,479,873 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KRT13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11664,735,285 - 64,740,791 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607735,580,853 - 35,585,710 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Krt13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247952,102,078 - 2,108,008 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Krt13
128 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:572
Count of miRNA genes:374
Interacting mature miRNAs:433
Transcripts:ENSMUST00000007275, ENSMUST00000128934, ENSMUST00000134282
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196176465108806384Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1196897693110603991Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1357631Motr1_mmodifier of tubby retinal degeneration 1 (mouse)Not determined1187691198103274115Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
10043865T2dm5sa_mtype 2 diabetes mellitus 5 in SMXA RI mice (mouse)Not determined1179813759104502698Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
13513918Heal55_mwound healing/ regeneration 55 (mouse)1199672251100232454Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse

Markers in Region
G67082  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811100,119,516 - 100,120,087UniSTSGRCm38
MGSCv371199,980,830 - 99,981,401UniSTSGRCm37
Celera11110,735,899 - 110,736,470UniSTS
Cytogenetic Map11DUniSTS
cM Map1158.49UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000007275   ⟹   ENSMUSP00000007275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,008,153 - 100,012,392 (-)Ensembl
GRCm38.p6 Ensembl11100,117,327 - 100,121,566 (-)Ensembl
Ensembl Acc Id: ENSMUST00000128934
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,009,971 - 100,011,403 (-)Ensembl
GRCm38.p6 Ensembl11100,119,145 - 100,120,577 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134282
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11100,008,727 - 100,009,660 (-)Ensembl
GRCm38.p6 Ensembl11100,117,901 - 100,118,834 (-)Ensembl
RefSeq Acc Id: NM_001313949   ⟹   NP_001300878
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,008,153 - 100,011,403 (-)NCBI
GRCm3811100,117,327 - 100,120,577 (-)NCBI
Sequence:
RefSeq Acc Id: NM_010662   ⟹   NP_034792
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911100,008,153 - 100,012,392 (-)NCBI
GRCm3811100,117,327 - 100,121,566 (-)NCBI
MGSCv371199,978,910 - 99,982,809 (-)RGD
Celera11110,733,979 - 110,737,878 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_034792   ⟸   NM_010662
- Peptide Label: isoform 1
- UniProtKB: Q3V176 (UniProtKB/Swiss-Prot),   Q6PAI1 (UniProtKB/Swiss-Prot),   P08730 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001300878   ⟸   NM_001313949
- Peptide Label: isoform 2
- UniProtKB: P08730 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000007275   ⟸   ENSMUST00000007275
Protein Domains
IF rod

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P08730-F1-model_v2 AlphaFold P08730 1-437 view protein structure

Promoters
RGD ID:8676660
Promoter ID:EPDNEW_M16361
Type:multiple initiation site
Name:Krt13_1
Description:Mus musculus keratin 13 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811100,121,566 - 100,121,626EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:101925 AgrOrtholog
Ensembl Genes ENSMUSG00000044041 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000007275 ENTREZGENE
  ENSMUST00000007275.3 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.170 UniProtKB/Swiss-Prot
  Single helix bin UniProtKB/Swiss-Prot
  Vasodilator-stimulated phosphoprotein UniProtKB/Swiss-Prot
InterPro IF_conserved UniProtKB/Swiss-Prot
  IF_rod_dom UniProtKB/Swiss-Prot
  Keratin_I UniProtKB/Swiss-Prot
KEGG Report mmu:16663 UniProtKB/Swiss-Prot
MGD MGI:101925 ENTREZGENE
NCBI Gene 16663 ENTREZGENE
PANTHER KERATIN, TYPE I CYTOSKELETAL 13 UniProtKB/Swiss-Prot
  PTHR23239 UniProtKB/Swiss-Prot
Pfam Filament UniProtKB/Swiss-Prot
PharmGKB KRT13 RGD
PhenoGen Krt13 PhenoGen
PRINTS TYPE1KERATIN UniProtKB/Swiss-Prot
PROSITE IF_ROD_1 UniProtKB/Swiss-Prot
  IF_ROD_2 UniProtKB/Swiss-Prot
SMART Filament UniProtKB/Swiss-Prot
Superfamily-SCOP Intermediate filament protein, coiled coil region UniProtKB/Swiss-Prot
UniProt K1C13_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3V176 ENTREZGENE
  Q6PAI1 ENTREZGENE
UniProt Secondary Q3V176 UniProtKB/Swiss-Prot
  Q6PAI1 UniProtKB/Swiss-Prot