SPACA6 (sperm acrosome associated 6)

Gene: SPACA6 (sperm acrosome associated 6) Canis lupus familiaris

Analyze

Symbol:

SPACA6

Name:

sperm acrosome associated 6

RGD ID:

13275868

Description:

INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

sperm acrosome membrane-associated protein 6

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	105,386,924 - 105,400,071 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	105,391,428 - 105,400,071 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	104,957,360 - 104,973,584 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	105,893,759 - 105,910,244 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	105,901,344 - 105,909,988 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	105,565,992 - 105,582,220 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	105,207,096 - 105,223,336 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	106,001,882 - 106,018,111 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

fusion of sperm to egg plasma membrane involved in single fertilization (IEA,ISO)

Cellular Component

acrosomal vesicle (ISO)

membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SPACA6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	105,386,924 - 105,400,071 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	105,391,428 - 105,400,071 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	104,957,360 - 104,973,584 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	105,893,759 - 105,910,244 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	105,901,344 - 105,909,988 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	105,565,992 - 105,582,220 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	105,207,096 - 105,223,336 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	106,001,882 - 106,018,111 (-)	NCBI		UU_Cfam_GSD_1.0

SPACA6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	51,682,686 - 51,713,143 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	51,688,346 - 51,712,387 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	52,192,635 - 52,208,443 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	56,888,592 - 56,900,255 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	49,246,128 - 49,257,979 (+)	NCBI		Celera
Cytogenetic Map	19	q13.41	NCBI
HuRef	19	48,527,534 - 48,539,384 (+)	NCBI		HuRef
CHM1_1	19	52,198,390 - 52,210,241 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	54,769,841 - 54,800,507 (+)	NCBI		T2T-CHM13v2.0

Spaca6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	18,045,955 - 18,063,274 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	18,047,420 - 18,063,271 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	17,826,085 - 17,843,010 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	17,827,158 - 17,843,009 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	17,967,939 - 17,976,035 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	17,535,682 - 17,547,627 (+)	NCBI		MGSCv36	mm8
Celera	17	18,771,626 - 18,779,754 (+)	NCBI		Celera
Cytogenetic Map	17	A3.2	NCBI
cM Map	17	10.5	NCBI

Spaca6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	67,345,996 - 67,365,210 (+)	NCBI		GRCr8
mRatBN7.2	1	58,672,128 - 58,689,309 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	58,677,797 - 58,688,562 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	63,502,385 - 63,513,167 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	72,195,049 - 72,205,800 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	65,412,431 - 65,423,213 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	59,700,578 - 59,719,359 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	59,704,998 - 59,715,763 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	60,620,393 - 60,639,020 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	56,487,751 - 56,498,516 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	54,858,755 - 54,869,507 (+)	NCBI		Celera
Cytogenetic Map	1	q12	NCBI

SPACA6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	57,732,111 - 57,756,596 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	59,652,351 - 59,680,872 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	48,632,681 - 48,656,124 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	57,513,910 - 57,529,817 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	57,517,865 - 57,529,817 (+)	Ensembl	panpan1.1		panPan2

Spaca6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	4,780,414 - 4,789,940 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004937026	110,793 - 120,301 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPACA6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	44,518,271 - 44,533,328 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666073	24,574,382 - 24,587,569 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spaca6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	3,342,155 - 3,355,572 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	3,340,420 - 3,354,076 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SPACA6
118 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			16		1		6		7	8	10	1
Low	5	5	6	6	5	6		4	5			5
Below cutoff								2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022427975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022427980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038467292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038467293	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038527981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038527982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038592275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038592276	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038653540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002633424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005320847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005354483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005389065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005422024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005422025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000043610 ⟹ ENSCAFP00000037051

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	105,391,428 - 105,400,071 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845008679 ⟹ ENSCAFP00845006848

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	105,901,344 - 105,909,988 (-)	Ensembl

RefSeq Acc Id:

XM_022427980 ⟹ XP_022283688

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	105,386,924 - 105,400,071 (-)	NCBI
Dog10K_Boxer_Tasha	1	104,960,399 - 104,973,584 (-)	NCBI

Sequence:

show sequence

ATGGCCCTGCTGGCCCAAGGCAGTACTGTCCCATCTGCCCTGGTGGCCCTCATGGTCTTCAGGG
GCCCCGCCTGGGCCTGTCTCTTCTGCTTCACATCCTATGAGGAGCGTGTCCGCATCTGCCAGAT
CTTTGCTGGTGTAGAGGGCCCTGAGCTGGAGAAGTGTCAGAAGGCGTTCATCACCGCCTTTAAG
GGCCTCCTAGACATTGAAATCAATGACTATGAGAGAAACCACCTGCATGATGCCTTCACCCAGA
TGACCCACTCTCTCCAGGAGATGGCCATGGCCCAGGGCTCCTTTAAGATTGCTTTTCCCAACGC
TGCGAAGAAAATGCAGGAAGTTATTAAGAAGCTTAAAGAAGTCGAGGCCTGCATCCCTCCCTGC
GGGGTCCAGGAGGCGAGCCGGAGTTTCCGCTGCCGCGGGTGCTACTCCGACGTGTGCGAACTCT
CGCTGGATTGCCCAGTCCAGGACTTGACAGTGACTCGAGGTCAACAGGCTAAGTTCTCTTGCTC
TGTGAACTTCTCGCTGCCTAAGGAGGAAATCACGTATTCCTGGAAGTTCGCAGGAGGAGGTGTC
CGGACGCAGGACCAGTCCTACTTCCGAGACATCCTGCAGGCCCGAGGACCCCTGGTGCGGATCC
GGCCGGTGCAGCCCAAGCACCGCGGGACCTACTGCTGCGAGATCTCGCAAGACCAGTTCCCCGT
GGCGCGGGTCTATTTCTTTCTTAACGTGACAGGTGCGCCCCCGCGTGGGGAGACCAAGCTGCAG
GTCTCCTTTCGGAAAGTGCTGGACTGGGCGCCCCGGGAGGCGGAGATGATCGAATCTTGGAGGC
CAAGCCTGGGCGAGCTGCTGGCCAGTTCCGGGGCTCTGACGCCCAGCAACCAGTGTCTGCTCGC
CGCCGCCGCGGCCTTAGCATCAGCCAGTGCGACGCTTGTGGTGTGGATGTTCTTTCGATGGTAC
TTCCAGGGCAACTAACAAAGTTTCAGAGCCATGCCACTGAATGCACAGAGGAAATGAGTGTAAA
TCCGTAAGAGAAGTGGATAGGAGGAAGTTTCTCCAAAGTTAAGCCATTTGAACCATGAGAAGCT
GAGAAGGCAGCTGTGGCATCCCTGAAAGCCAAATGAAGAAAGCACTTCAAGAAGAGAGTGATCA
GCTGGTCAGATGCTGCTGCATCATGAGAGAGGAGGCCTGAGAATTGGCCATTGGTTTCAGCAAC
ATGGACATCACTGATAAACTTGACTGGAGCCATTTCCAAAGAGCCATGGCTGGGAGCCATCTGA
TTGGCATGGATTTGAAAGTCAGTGGGAGGCAACACTAGTCATCAGAGAAATGCAAATCAAAGCC
ACAATGAGATACCATTTCACACCCCCTGGGAGGCTATAATCAAAAAGTCAGGTGAGGGGCACCT
GAGTGGCTTAGTTGGTTAAGCATCTGCCTTGGGCTCAGGTCATGATCCCAGGGTCCTGGAATCA
AGCCTCGCCTTGGGCTCCCTGCTCAGCAGAGTCTGCTTTTCCCTCTCCCTCTACTCCTCACCTT
ACTCATGTTCACTGTCTCTCTCAAATAAAATCTTTTTTAAACAAAATCAGGTGATAACAAATGT
TGGTGACAATATAGGGAAATCAGAACCCTCCTACTTTGCTAATGGGAATATAAAATGGTACAGG
CGCTGTGAAAACCACCTGTCAGTTTCTTAAATTAAACAGGACCACCATATGACTCAGCAACTCC
ACTCCTAGAGAAGCCCACCTGAGAGAATCTAACACACAGAGAATCTAAGACACATCTAACACAC
AGTTTCTGTTCACACAGAAACGTGTCTGTGAATGTCTATAGCATTATTCACAACAGCCAAAAAA
TGGAAACATCCCAAATATCCATCGACTGATAAATGTGTAAACCAAATGTAATATATCCCTACAG
AGGAATATTATTTGGAAGTAAAAGGGAATGAGCCAATGATACATGCAACAACACAGATGAACTT
TGTGTCACAAAAAAATATATATTGCATGATTCCATTTATGTGAAATGTCCAGAAGAGACAAATC
TGTGGAGATAAAGCATAGATTGTGGTTGCCTAGGGCATGGAGGTGGGTTCGGGGTGAGGAATGC
AAGTGACTGCCAGTGAATGTGGAGTTCCTTTTGGGGGGTGATGAAAATGTTCTAAAATTAGATT
ATGGTAATGGCTGCAGGAG

hide sequence

RefSeq Acc Id:

XM_038467292 ⟹ XP_038323220

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	105,569,033 - 105,582,220 (-)	NCBI

RefSeq Acc Id:

XM_038467293 ⟹ XP_038323221

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	105,565,992 - 105,582,220 (-)	NCBI

RefSeq Acc Id:

XM_038527981 ⟹ XP_038383909

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	106,004,923 - 106,018,111 (-)	NCBI

RefSeq Acc Id:

XM_038527982 ⟹ XP_038383910

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	106,001,882 - 106,018,111 (-)	NCBI

RefSeq Acc Id:

XM_038592275 ⟹ XP_038448203

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	105,209,930 - 105,223,336 (-)	NCBI

RefSeq Acc Id:

XM_038592276 ⟹ XP_038448204

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	105,207,096 - 105,223,336 (-)	NCBI

RefSeq Acc Id:

XM_038653540 ⟹ XP_038509468

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	1	104,957,360 - 104,973,584 (-)	NCBI

RefSeq Acc Id:

XM_038656067 ⟹ XP_038511995

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,896,801 - 105,910,244 (-)	NCBI

RefSeq Acc Id:

XM_038656068 ⟹ XP_038511996

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,896,801 - 105,909,988 (-)	NCBI

RefSeq Acc Id:

XM_038656069 ⟹ XP_038511997

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,893,759 - 105,909,988 (-)	NCBI

RefSeq Acc Id:

XM_038656070 ⟹ XP_038511998

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,896,801 - 105,910,244 (-)	NCBI

RefSeq Acc Id:

XM_038656071 ⟹ XP_038511999

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,896,801 - 105,910,244 (-)	NCBI

RefSeq Acc Id:

XR_002633424

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	105,386,924 - 105,394,112 (-)	NCBI
Dog10K_Boxer_Tasha	1	104,960,399 - 104,967,538 (-)	NCBI

Sequence:

show sequence

TGCGCGCACACACCACACACACACACACACACACACACACACAAAACTCCTGAGCCAGCCATCC
TCTCTCTCCTTTCGGCCCAGTCCCTCCGAGCCACGTCCCTTGGAGGGTCACTCCTGACACAGCA
TCTTCCCCTGCGAGGACCTCTCTAGGATCAGGTCCCTGCTTCAACGGAAGGTTTCCAGCTAGGA
CCCCATCTTCCGATAGTCCTGTCCCAGATCAGCCCGGGTCTCAGTCTGGCCCCGTGCACTTTGT
GACGTTTCCTTTCCAACCGGGCTGCCTCCCCTGAAACTATGGCCCAGGGCACTGCCCCGCCCCC
TCACTGAACTACACCTGGGTTGGCCCCGAATCCCTAGTAAGCCTCAGGCCGGCGCCTGACCTTA
GCGGGCAGCAGTCCTGGCCCCGCCTGCAGGAGGAAAGCAGCAGGCTTGGCTCCGCCCCTGGGGT
GGGCGGTACCAGACCTGGCGCCGCCCCCCGGAGGAACGCCACCTGGCCCAGTTAGCCTATCCCG
TGGGGGAGTTTCGGATGCGCACTTTCCTCCAGGGTAGTAACGCTTCCTCTCTCTCCACAGTCGA
GGCCTGCATCCCTCCCTGCGGGGTCCAGGAGGCGAGCCGGAGTTTCCGCTGCCGCGGGTGCTAC
TCCGACGTGTGCGAACTCTCGCTGGATTGCCCAGTCCAGGACTTGACAGTGACTCGAGGTCAAC
AGGCTAAGTTCTCTTGCTCTGTGAACTTCTCGCTGCCTAAGGAGGAAATCACGTATTCCTGGAA
GTTCGCAGGAGGAGGTCCGGACGCAGGACCAGTCCTACTTCCGAGACATCCTGCAGGCCCGAGG
ACCCCTGGTGCGGATCCGGCCGGTGCAGCCCAAGCACCGCGGGACCTACTGCTGCGAGATCTCG
CAAGACCAGTTCCCCGTGGCGCGGGTCTATTTCTTTCTTAACGTGACAGGTGCGCCCCCGCGTG
GGGAGACCAAGCTGCAGGTCTCCTTTCGGAAAGTGCTGGACTGGGCGCCCCGGGAGGCGGAGAT
GATCGAATCTTGGAGGCCAAGCCTGGGCGAGCTGCTGGCCAGTTCCGGGGCTCTGACGCCCAGC
AACCAGTGTCTGCTCGCCGCCGCCGCGGCCTTAGCATCAGCCAGTGCGACGCTTGTGGTGTGGA
TGTTCTTTCGATGGTACTTCCAGGGCAACTAACAAAGGTATCTTTTTCTCACTTTCTTATCCTG
TTTTCATTCCTATAATAAAGAATATATGTCAGCTCTCTAGATTATCTCATCTTTGAAGGTGTTC
ACTACTAATGAAGGTAGAAGGAGGGGCACCAGACCACAAATATACCCAGGTGAATATTCCCCTA
ATAACAGTAACGTGTAGAGCTGACACAGTGCAACGTTCTGTGCTGAGGACTTTGAGTACAAGCT
CAGGCCCCTCCCCAGATTTCTGGCAGTCTCTTTGACATTTCAACCTGCAGAGCACACACTCAAA
TGGAGTCCTTGTTGTCTCTTTGAGAGCCTGTTCCTCCCCAAGGCTTTCCTACTGAGGGTACCAC
CAACCACCCAGCTGCTCAACTGGAAACCTAAGAGTTTAATTCCTCCTCCACTTCTACTTCCATG
CCTCAGCCTTTTTAACTCCTAAACATCTTGTGCAGCCACCCTCTCTCTGTGGTCCCAGTTACCA
TCATCTCTTGCCTGGGTTATTCCAGCAGCATCTCCACTCACCTCCCTGCCTCCACTCAGTGCAC
TACAGTCCATCCTCCACATAGCAGCCAGGGGAATATTTTGAAGTATGTCTGATCGGGTCACTCC
TTTGCTCAAAACCCTTTAGCTCTCTATTGCCGCTGGAACAAAATCCAGTTCCCTGTTAGGGCCT
CCAAGATGCCCCAGGTTCTGGGCCTTGCTGATCTGGTGAGCCTTGTCTTTCTACCCTGCAGGCG
TCATGGGTAGATCTTTCCACCCTGCAGTTTGTCTGGCCTTTGCTTATTCCTTAAATTTGTCATG
ATTCTTGTCACCCTCTCCAGGACCTGGTTCGCTGTTGTTTCCTGCCTAGAATCACGTTTTCTCC
CTTCTGTGTCTAAACTCACTTATGATTTCCTCTGAAAAACCTTTACATGTATTAACCAATTTCA
TCCCTCTGACAACTCTGTGTCTGGCAGGCAGCTGGACTCCACCTCCCTTTTTTTGTCCTCTTTA
CTCTCTGGCCCCACTAGTCATTTTTTTGTCTCTTGAACATGCAAAGCTCAGTCCCACGTTCCAG
CCTTTGCACATGATGTTCTTCATACTTGATGTGACTTGACTGTGAAACTCACAAAGCTACCTCC
CTCTCACTGCACAGGTCCCAGCTCAAATGTCATCTTCACTGACCATTTCCCTCCCTGTCAGCTG
ACATCCCCCTCTCTATTTTCACTTGTGCATTTTACTCATGGGACTTGATGTCAACCTGTGTTTT
TTATTTTGGTTTGTGTCTTCTCACCTAAAAGATAAGTTACTTCTGGGCATCTCCTCATTCTTGT
TCACTAATATATTCCCCTTTGCTCACTCCTTCATTCATTCAGAGAATATTTACTGAGTACTTCT
TTTTTTTTTTTTTTTTTTTTTTACTGAGTACTTCTATGTGCCAGGCATTTTCAAGGCACTGTAG
AGACAGCAGTGAAGAAATCAGAACAGATGGGGTGCTGGGATGGTTCAGTAGTTGTGTGTCTGCC
TTTGGCTACGGTTGTGATCCCGGGGTGCTGGGATCGAGTCCCATGGGGAGCCTGCTCCTCTCTC
TGCCTGTATCTCTGCCTCTCTCTGTGTGTCTCTCATGAACAAATAAATAAAATCTTTAAAAAAA
AAATCACAATAGACAAAAATCTGCTCCCTAAAGGAGTTTAGATTCTTTGAGGGGCTAGTGCACA
GAGGTAGAGAAAGAATCTTGTGGAGCCCGACATGGGGCTCAATTTCATATCCCTGAAATCATGA
CCTGAGATGAAATCAGGAGTCAGATGCTTAACTGACTGAGCTAGCCAGGTGCCTGTGGAGTTTA
GATTGTAATGGATGGTCAGACAATAAAAAGAAAATTAAACAAAATAAGACACGGATCAAATGAG
AAACGGCAAGGGCAAAATCCCTCTAGTGCACCTAATATTGGAGACGTGGCCAGGAGGCATCTGG
AGCAGGACTTTAGGAAACGAGTACACAATGAAGTCAGAGAGAATGTGCAGGACCTTGGCCACTG
TAAGGTCTGGATTTCCCTCTAAGATGAGAGTAATGGGCAGTTTTTGAGGCCAGGAAAGTCATGA
TTTGATTTGATTTGTATGGCTACTGCATGGACAATGAACTGTAGGGGGCAGGAACCACTATGAG
GTGCTGTGATAATCTAGACAGCTATAATTTGGGAAGGAGATGCAGCTCAGGGACAACTGTGGTG
ACAGTGACGAGTTTGGGTTTTTGGTTTTTTTTTTTTTTCTTTTTTAAAAATTTTATCTATTTGA
GAGAGAGCAGAGCATGAGAGGGAGAAGCAGACTCCCCACCAAGCAGGAAGCCCAATGTGGGGCT
CGATCCCAGGACCCCAGGATCACGACCTTAGCCAAAAGCAGATGCTTAACTGACTGAGCCTCCC
AGGTGCCCCTGACAGTGAGGAGCTCTAGATCTGTCCTGAAGGTAGGATCAGTGGGGTTCGCTGA
TAGATTGGAATGTTAGGTGTGAGAGGAAGAAAAGAGAAGGGGCAGTGTCCATGGTCAGGGCAGC
AGAGGGTCCAGTAGAATCCTCTGCCATGATGGCAATGTTCTAGATATGTACTGTCCATTGTGGT
GGCTACCAGCTACCTGTGGCCATGAAGTGGGTCAGATGTGGCCAGTGCAACTGAGGATCTAAAT
TTATAATCTTTTATAGCTTTAATAATTTAAGTTGTCCCTCAGCTGTGAAAATAGAAATCACAGA
GGCATGTGTCTTTGTGTAACTCTGGATCACACTCTTTGTTTACTTGACAAGGAGCTCCTGGAAG
GCAGGGGCTGCCTCTTACTCATTTCTGCATTTGCAAACCTGGCAAAATGTGTAATTCAGTACAT
ACTTGGTAAATGGTTTCATGACTGATTGACATCATCAAAGAATGAATTTAAAAAATTAAATAGT
CCTCTGTGGTAGGGGATATGTTGTGTGCAGTGCAGTTCTAGCATTTTTGATGTGAGCAGCTAGA
ATGTCAGAGTTCTGTTTACTGAGATAACGGATGCTGTGGCAGGAGCAGTTTTCTTGGAAGGTTT
CAAGGAGGGAGGAAGAGGAGGACAGATGAGGCGTTGGGTCTGGTGATGAGGAAGTGACTTGGAG
GCAATTGGGTATACAAGTCGGGAATTCTGGAGTGAGGTCTGATCTGAAGATACAAGTTTCAGAG
CCATGGGAACCCTGGGTGGCGCAGCGGTTTAGCGCCTGCCTTTGGCCCAGGACGCGATCCTGGA
GACCCGGGATCGAATCCCACGTCGGGCTCCCGGTGCATGGAGCCTGCTTCTCCCTCTGCCTATG
TCTCTCTGCCTCTCTCTCTCTCTGTGTGACTATCATAAATAAATAAAAAATTTAAAAAAAAAGT
TTCAGAGCCATGCCACTGAATGCACAGAGGAAATGAGTGTAAATCCGTAAGAGAAGTGGATAGG
AGGAAGTTTCTCCAAAGTTAAGCCATTTGAACCATGAGAAGCTGAGAAGGCAGCTGTGGCATCC
CTGAAAGCCAAATGAAGAAAGCACTTCAAGAAGAGAGTGATCAGCTGGTCAGATGCTGCTGCAT
CATGAGAGAGGAGGCCTGAGAATTGGCCATTGGTTTCAGCAACATGGACATCACTGATAAACTT
GACTGGAGCCATTTCCAAAGAGCCATGGCTGGGAGCCATCTGATTGGCATGGATTTGAAAGTCA
GTGGGAGGCAACACTAGTCATCAGAGAAATGCAAATCAAAGCCACAATGAGATACCATTTCACA
CCCCCTGGGAGGCTATAATCAAAAAGTCAGGTGAGGGGCACCTGAGTGGCTTAGTTGGTTAAGC
ATCTGCCTTGGGCTCAGGTCATGATCCCAGGGTCCTGGAATCAAGCCTCGCCTTGGGCTCCCTG
CTCAGCAGAGTCTGCTTTTCCCTCTCCCTCTACTCCTCACCTTACTCATGTTCACTGTCTCTCT
CAAATAAAATCTTTTTTAAACAAAATCAGGTGATAACAAATGTTGGTGACAATATAGGGAAATC
AGAACCCTCCTACTTTGCTAATGGGAATATAAAATGGTACAGGCGCTGTGAAAACCACCTGTCA
GTTTCTTAAATTAAACAGGACCACCATATGACTCAGCAACTCCACTCCTAGAGAAGCCCACCTG
AGAGAATCTAACACACAGAGAATCTAAGACACATCTAACACACAGTTTCTGTTCACACAGAAAC
GTGTCTGTGAATGTCTATAGCATTATTCACAACAGCCAAAAAATGGAAACATCCCAAATATCCA
TCGACTGATAAATGTGTAAACCAAATGTAATATATCCCTACAGAGGAATATTATTTGGAAGTAA
AAGGGAATGAGCCAATGATACATGCAACAACACAGATGAACTTTGTGTCACAAAAAAATATATA
TTGCATGATTCCATTTATGTGAAATGTCCAGAAGAGACAAATCTGTGGAGATAAAGCATAGATT
GTGGTTGCCTAGGGCATGGAGGTGGGTTCGGGGTGAGGAATGCAAGTGACTGCCAGTGAATGTG
GAGTTCCTTTTGGGGGGTGATGAAAATGTTCTAAAATTAGATTATGGTAATGGCTGCAGGAG

hide sequence

RefSeq Acc Id:

XR_005320847

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	105,569,033 - 105,576,166 (-)	NCBI

RefSeq Acc Id:

XR_005354483

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	106,004,923 - 106,012,062 (-)	NCBI

RefSeq Acc Id:

XR_005389065

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	105,209,930 - 105,217,284 (-)	NCBI

RefSeq Acc Id:

XR_005422024

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,896,801 - 105,910,244 (-)	NCBI

RefSeq Acc Id:

XR_005422025

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	105,896,801 - 105,903,940 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022283688	(Get FASTA)	NCBI Sequence Viewer
	XP_038323220	(Get FASTA)	NCBI Sequence Viewer
	XP_038323221	(Get FASTA)	NCBI Sequence Viewer
	XP_038383909	(Get FASTA)	NCBI Sequence Viewer
	XP_038383910	(Get FASTA)	NCBI Sequence Viewer
	XP_038448203	(Get FASTA)	NCBI Sequence Viewer
	XP_038448204	(Get FASTA)	NCBI Sequence Viewer
	XP_038509468	(Get FASTA)	NCBI Sequence Viewer
	XP_038511995	(Get FASTA)	NCBI Sequence Viewer
	XP_038511996	(Get FASTA)	NCBI Sequence Viewer
	XP_038511997	(Get FASTA)	NCBI Sequence Viewer
	XP_038511998	(Get FASTA)	NCBI Sequence Viewer
	XP_038511999	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000037051.2
	ENSCAFP00030000128.1
	ENSCAFP00040003229.1
	ENSCAFP00845006848
	ENSCAFP00845006848.1

RefSeq Acc Id:	XP_022283688 ⟸ XM_022427980
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LVL5 (UniProtKB/TrEMBL), A0A8I3MMA1 (UniProtKB/TrEMBL), A0A8C0L366 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALLAQGSTVPSALVALMVFRGPAWACLFCFTSYEERVRICQIFAGVEGPELEKCQKAFITAFK GLLDIEINDYERNHLHDAFTQMTHSLQEMAMAQGSFKIAFPNAAKKMQEVIKKLKEVEACIPPC GVQEASRSFRCRGCYSDVCELSLDCPVQDLTVTRGQQAKFSCSVNFSLPKEEITYSWKFAGGGV RTQDQSYFRDILQARGPLVRIRPVQPKHRGTYCCEISQDQFPVARVYFFLNVTGAPPRGETKLQ VSFRKVLDWAPREAEMIESWRPSLGELLASSGALTPSNQCLLAAAAALASASATLVVWMFFRWY FQGN hide sequence

RefSeq Acc Id:

ENSCAFP00000037051 ⟸ ENSCAFT00000043610

RefSeq Acc Id:	XP_038323221 ⟸ XM_038467293
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038323220 ⟸ XM_038467292
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038448204 ⟸ XM_038592276
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038448203 ⟸ XM_038592275
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038511997 ⟸ XM_038656069
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LVL5 (UniProtKB/TrEMBL), A0A8I3MMA1 (UniProtKB/TrEMBL), A0A8C0L366 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038511999 ⟸ XM_038656071
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038511998 ⟸ XM_038656070
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0L366 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038511995 ⟸ XM_038656067
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0L366 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038511996 ⟸ XM_038656068
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LVL5 (UniProtKB/TrEMBL), A0A8I3MMA1 (UniProtKB/TrEMBL), A0A8C0L366 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038509468 ⟸ XM_038653540
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LVL5 (UniProtKB/TrEMBL), A0A8I3MMA1 (UniProtKB/TrEMBL), A0A8C0L366 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038383910 ⟸ XM_038527982
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L366 (UniProtKB/TrEMBL), A0A8C0LVL5 (UniProtKB/TrEMBL), A0A8I3MMA1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038383909 ⟸ XM_038527981
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L366 (UniProtKB/TrEMBL), A0A8C0LVL5 (UniProtKB/TrEMBL), A0A8I3MMA1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845006848 ⟸ ENSCAFT00845008679

Protein Domains

Ig-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002820	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030000114	UniProtKB/TrEMBL
	ENSCAFG00040001983	UniProtKB/TrEMBL
	ENSCAFG00845004847	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000043610.4	UniProtKB/TrEMBL
	ENSCAFT00030000155.1	UniProtKB/TrEMBL
	ENSCAFT00040003755.1	UniProtKB/TrEMBL
	ENSCAFT00845008679	ENTREZGENE
	ENSCAFT00845008679.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Immunoglobulin	UniProtKB/TrEMBL
	SPACA6	UniProtKB/TrEMBL
NCBI Gene	SPACA6	ENTREZGENE
PANTHER	PTHR37366	UniProtKB/TrEMBL
	SPERM ACROSOME MEMBRANE-ASSOCIATED PROTEIN 6	UniProtKB/TrEMBL
Pfam	PF00047	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
SMART	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A8C0L366	ENTREZGENE
	A0A8C0LVL5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MMA1	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:53990	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message