DDX55 (DEAD-box helicase 55) - Rat Genome Database

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Gene: DDX55 (DEAD-box helicase 55) Homo sapiens
Analyze
Symbol: DDX55
Name: DEAD-box helicase 55
RGD ID: 1323439
HGNC Page HGNC:20085
Description: Enables RNA binding activity. Located in cytosol; nucleolus; and nucleoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: ATP-dependent RNA helicase DDX55; DEAD (Asp-Glu-Ala-Asp) box polypeptide 55; DEAD box protein 55; FLJ16577; KIAA1595; MGC33209
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: DDX55P1   LOC100421344  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812123,602,099 - 123,620,943 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12123,602,077 - 123,620,943 (+)EnsemblGRCh38hg38GRCh38
GRCh3712124,086,646 - 124,105,490 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612122,652,625 - 122,671,435 (+)NCBINCBI36Build 36hg18NCBI36
Build 3412122,611,551 - 122,630,362NCBI
Celera12123,683,109 - 123,701,918 (+)NCBICelera
Cytogenetic Map12q24.31NCBI
HuRef12121,048,035 - 121,066,826 (+)NCBIHuRef
CHM1_112123,907,616 - 123,926,431 (+)NCBICHM1_1
T2T-CHM13v2.012123,600,963 - 123,619,807 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IDA)
membrane  (HDA)
nucleolus  (IBA,IDA)
nucleoplasm  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1552844   PMID:10997877   PMID:12477932   PMID:15489334   PMID:15635413   PMID:16344560   PMID:18187620   PMID:19946888   PMID:21081503   PMID:21145461   PMID:21244100   PMID:21832049  
PMID:21873635   PMID:22658674   PMID:23449627   PMID:25281560   PMID:25416956   PMID:25921289   PMID:26186194   PMID:26344197   PMID:26496610   PMID:27926873   PMID:28514442   PMID:28515276  
PMID:28695742   PMID:28977666   PMID:29298432   PMID:29509190   PMID:29568061   PMID:30196744   PMID:30209976   PMID:30884312   PMID:30940648   PMID:30948266   PMID:31091453   PMID:31343991  
PMID:31527615   PMID:31586073   PMID:31665637   PMID:31822558   PMID:32296183   PMID:32433965   PMID:32694731   PMID:32807901   PMID:32877691   PMID:33048000   PMID:33226137   PMID:33306668  
PMID:33536335   PMID:33545068   PMID:33742100   PMID:33961781   PMID:34079125   PMID:34189442   PMID:34244565   PMID:34349018   PMID:34373451   PMID:35013218   PMID:35271311   PMID:35575683  
PMID:35652658   PMID:35696571   PMID:35850772   PMID:35915203   PMID:35944360   PMID:36089195   PMID:36215168   PMID:36232890   PMID:36244648   PMID:36526897   PMID:36574265   PMID:36912080  
PMID:37267103   PMID:37314180   PMID:37689310   PMID:37827155   PMID:38697112   PMID:38777146  


Genomics

Comparative Map Data
DDX55
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812123,602,099 - 123,620,943 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12123,602,077 - 123,620,943 (+)EnsemblGRCh38hg38GRCh38
GRCh3712124,086,646 - 124,105,490 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612122,652,625 - 122,671,435 (+)NCBINCBI36Build 36hg18NCBI36
Build 3412122,611,551 - 122,630,362NCBI
Celera12123,683,109 - 123,701,918 (+)NCBICelera
Cytogenetic Map12q24.31NCBI
HuRef12121,048,035 - 121,066,826 (+)NCBIHuRef
CHM1_112123,907,616 - 123,926,431 (+)NCBICHM1_1
T2T-CHM13v2.012123,600,963 - 123,619,807 (+)NCBIT2T-CHM13v2.0
Ddx55
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395124,690,895 - 124,707,723 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5124,690,927 - 124,707,723 (+)EnsemblGRCm39 Ensembl
GRCm385124,552,832 - 124,569,660 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5124,552,864 - 124,569,660 (+)EnsemblGRCm38mm10GRCm38
MGSCv375125,002,873 - 125,018,947 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365124,813,504 - 124,829,590 (+)NCBIMGSCv36mm8
Celera5121,629,125 - 121,645,637 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map563.66NCBI
Ddx55
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81237,695,444 - 37,711,198 (-)NCBIGRCr8
mRatBN7.21232,034,462 - 32,050,218 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1232,034,462 - 32,050,219 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1233,213,387 - 33,229,625 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01233,824,708 - 33,840,948 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01232,876,575 - 32,892,814 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01237,453,005 - 37,468,935 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1237,453,005 - 37,468,935 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01239,324,015 - 39,339,763 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41233,147,211 - 33,162,925 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11233,011,099 - 33,026,931 (-)NCBI
Celera1233,723,880 - 33,740,275 (-)NCBICelera
Cytogenetic Map12q15NCBI
Ddx55
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554825,389,195 - 5,401,873 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554825,389,195 - 5,401,885 (-)NCBIChiLan1.0ChiLan1.0
DDX55
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210131,675,799 - 131,695,839 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112131,672,558 - 131,692,216 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012121,187,465 - 121,206,287 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112125,414,730 - 125,433,147 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12125,414,730 - 125,433,147 (+)Ensemblpanpan1.1panPan2
DDX55
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1266,022,739 - 6,036,539 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl266,023,288 - 6,036,782 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha266,185,611 - 6,199,418 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0266,272,817 - 6,286,633 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl266,272,817 - 6,286,617 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1266,206,294 - 6,220,107 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0266,298,665 - 6,312,477 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0266,251,877 - 6,265,689 (-)NCBIUU_Cfam_GSD_1.0
Ddx55
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118158,257,907 - 158,282,235 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365581,200,064 - 1,221,521 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365581,198,281 - 1,221,497 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DDX55
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1429,368,023 - 29,387,776 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11429,368,018 - 29,388,785 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21431,060,310 - 31,080,076 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DDX55
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111118,930,642 - 118,949,331 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11118,930,683 - 118,948,814 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037126,326,273 - 126,346,294 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ddx55
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474723,401,323 - 23,412,804 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474723,401,267 - 23,413,002 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DDX55
48 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12q24.23-24.33(chr12:118165459-133182322)x3 copy number gain See cases [RCV000050866] Chr12:118165459..133182322 [GRCh38]
Chr12:118603264..133758908 [GRCh37]
Chr12:117087647..132268981 [NCBI36]
Chr12:12q24.23-24.33
pathogenic
GRCh38/hg38 12q24.31-24.33(chr12:122985202-130714574)x1 copy number loss See cases [RCV000051345] Chr12:122985202..130714574 [GRCh38]
Chr12:123469749..131199119 [GRCh37]
Chr12:122035702..129765072 [NCBI36]
Chr12:12q24.31-24.33
pathogenic
GRCh38/hg38 12q24.31-24.33(chr12:123444758-133191400)x3 copy number gain See cases [RCV000051151] Chr12:123444758..133191400 [GRCh38]
Chr12:123929305..133767986 [GRCh37]
Chr12:122495258..132278059 [NCBI36]
Chr12:12q24.31-24.33
pathogenic
GRCh38/hg38 12q24.21-24.33(chr12:115131583-133166920)x3 copy number gain See cases [RCV000053689] Chr12:115131583..133166920 [GRCh38]
Chr12:115569388..133743506 [GRCh37]
Chr12:114053771..132253579 [NCBI36]
Chr12:12q24.21-24.33
pathogenic
GRCh38/hg38 12q24.23-24.33(chr12:119417382-133191400)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053691]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053691]|See cases [RCV000053691] Chr12:119417382..133191400 [GRCh38]
Chr12:119855187..133767986 [GRCh37]
Chr12:118339570..132278059 [NCBI36]
Chr12:12q24.23-24.33
pathogenic
GRCh38/hg38 12q24.31-24.33(chr12:123365769-133191400)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053693]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053693]|See cases [RCV000053693] Chr12:123365769..133191400 [GRCh38]
Chr12:123850316..133767986 [GRCh37]
Chr12:122416269..132278059 [NCBI36]
Chr12:12q24.31-24.33
pathogenic
GRCh38/hg38 12q24.31(chr12:123509825-123975309)x3 copy number gain See cases [RCV000134900] Chr12:123509825..123975309 [GRCh38]
Chr12:123994372..124459856 [GRCh37]
Chr12:122560325..123025809 [NCBI36]
Chr12:12q24.31
uncertain significance
GRCh38/hg38 12q24.31-24.33(chr12:123509825-133191400)x3 copy number gain See cases [RCV000135535] Chr12:123509825..133191400 [GRCh38]
Chr12:123994372..133767986 [GRCh37]
Chr12:122560325..132278059 [NCBI36]
Chr12:12q24.31-24.33
pathogenic
GRCh38/hg38 12q24.31-24.33(chr12:120697672-133202490)x3 copy number gain See cases [RCV000137651] Chr12:120697672..133202490 [GRCh38]
Chr12:121135475..133779076 [GRCh37]
Chr12:119619858..132289149 [NCBI36]
Chr12:12q24.31-24.33
pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh38/hg38 12q24.31-24.32(chr12:120718786-127500215)x1 copy number loss See cases [RCV000142454] Chr12:120718786..127500215 [GRCh38]
Chr12:121156589..127984760 [GRCh37]
Chr12:119640972..126550713 [NCBI36]
Chr12:12q24.31-24.32
pathogenic
GRCh38/hg38 12q24.31-24.32(chr12:121917758-127802717)x1 copy number loss See cases [RCV000143250] Chr12:121917758..127802717 [GRCh38]
Chr12:122355664..128287262 [GRCh37]
Chr12:120840047..126853215 [NCBI36]
Chr12:12q24.31-24.32
pathogenic
GRCh38/hg38 12q24.21-24.33(chr12:114268403-133201316)x3 copy number gain See cases [RCV000143656] Chr12:114268403..133201316 [GRCh38]
Chr12:114706208..133777902 [GRCh37]
Chr12:113190591..132287975 [NCBI36]
Chr12:12q24.21-24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
GRCh37/hg19 12q24.31-24.32(chr12:122726807-127365912)x1 copy number loss See cases [RCV000449178] Chr12:122726807..127365912 [GRCh37]
Chr12:12q24.31-24.32
likely pathogenic
GRCh37/hg19 12q24.31(chr12:123404920-124192840) copy number gain See cases [RCV000446571] Chr12:123404920..124192840 [GRCh37]
Chr12:12q24.31
likely pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_020936.3(DDX55):c.1325G>T (p.Arg442Ile) single nucleotide variant not specified [RCV004325684] Chr12:123618829 [GRCh38]
Chr12:124103376 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1759A>G (p.Lys587Glu) single nucleotide variant not specified [RCV004290280] Chr12:123620096 [GRCh38]
Chr12:124104643 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.317C>G (p.Thr106Arg) single nucleotide variant not specified [RCV004311968] Chr12:123607502 [GRCh38]
Chr12:124092049 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1361G>A (p.Gly454Asp) single nucleotide variant not specified [RCV004320613] Chr12:123619459 [GRCh38]
Chr12:124104006 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.52C>G (p.Pro18Ala) single nucleotide variant not specified [RCV004307418] Chr12:123602200 [GRCh38]
Chr12:124086747 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.31(chr12:124097565-124462296)x3 copy number gain not provided [RCV000683425] Chr12:124097565..124462296 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.23-24.33(chr12:120367241-133777645)x3 copy number gain not provided [RCV000738070] Chr12:120367241..133777645 [GRCh37]
Chr12:12q24.23-24.33
pathogenic
GRCh37/hg19 12q24.31(chr12:122706844-124294517)x3 copy number gain not provided [RCV000738079] Chr12:122706844..124294517 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_020936.3(DDX55):c.1385A>G (p.Lys462Arg) single nucleotide variant not specified [RCV004311889] Chr12:123619483 [GRCh38]
Chr12:124104030 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.31-24.32(chr12:122169403-129084163)x1 copy number loss not provided [RCV000848395] Chr12:122169403..129084163 [GRCh37]
Chr12:12q24.31-24.32
pathogenic
GRCh37/hg19 12q24.31(chr12:123807132-124299781)x3 copy number gain not provided [RCV001260170] Chr12:123807132..124299781 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.31-24.32(chr12:123878845-126829341) copy number loss Severe short stature [RCV001352637] Chr12:123878845..126829341 [GRCh37]
Chr12:12q24.31-24.32
pathogenic
NC_000012.11:g.(?_123738222)_(124242579_?)dup duplication Combined oxidative phosphorylation defect type 7 [RCV002239168] Chr12:123738222..124242579 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.22-24.33(chr12:117461902-133841395)x3 copy number gain Neurodevelopmental disorder with nonspecific brain abnormalities and with or without seizures [RCV001801213] Chr12:117461902..133841395 [GRCh37]
Chr12:12q24.22-24.33
likely pathogenic
GRCh37/hg19 12q24.31(chr12:124097565-124278641) copy number loss not specified [RCV002053032] Chr12:124097565..124278641 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.31(chr12:123807132-124300075)x3 copy number gain not provided [RCV001834350] Chr12:123807132..124300075 [GRCh37]
Chr12:12q24.31
uncertain significance
NC_000012.11:g.(?_122277634)_(124242579_?)del deletion not provided [RCV003111519] Chr12:122277634..124242579 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.542T>G (p.Phe181Cys) single nucleotide variant not specified [RCV004246922] Chr12:123608820 [GRCh38]
Chr12:124093367 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1381C>T (p.Pro461Ser) single nucleotide variant not specified [RCV004144859] Chr12:123619479 [GRCh38]
Chr12:124104026 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1304A>G (p.His435Arg) single nucleotide variant not specified [RCV004130850] Chr12:123618808 [GRCh38]
Chr12:124103355 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1157A>G (p.Asn386Ser) single nucleotide variant not specified [RCV004076985] Chr12:123617865 [GRCh38]
Chr12:124102412 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.52C>T (p.Pro18Ser) single nucleotide variant not specified [RCV004172140] Chr12:123602200 [GRCh38]
Chr12:124086747 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.688G>A (p.Val230Met) single nucleotide variant not specified [RCV004079709] Chr12:123610075 [GRCh38]
Chr12:124094622 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.296A>G (p.Asp99Gly) single nucleotide variant not specified [RCV004238179] Chr12:123607481 [GRCh38]
Chr12:124092028 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.936G>A (p.Met312Ile) single nucleotide variant not specified [RCV004240172] Chr12:123615296 [GRCh38]
Chr12:124099843 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.827C>T (p.Thr276Ile) single nucleotide variant not specified [RCV004135523] Chr12:123615187 [GRCh38]
Chr12:124099734 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.897T>G (p.Ile299Met) single nucleotide variant not specified [RCV004118332] Chr12:123615257 [GRCh38]
Chr12:124099804 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1153A>C (p.Ile385Leu) single nucleotide variant not specified [RCV004169340] Chr12:123617861 [GRCh38]
Chr12:124102408 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1575G>C (p.Lys525Asn) single nucleotide variant not specified [RCV004236742] Chr12:123619673 [GRCh38]
Chr12:124104220 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1607A>C (p.Glu536Ala) single nucleotide variant not specified [RCV004117759] Chr12:123619705 [GRCh38]
Chr12:124104252 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1123A>G (p.Met375Val) single nucleotide variant not specified [RCV004150216] Chr12:123617831 [GRCh38]
Chr12:124102378 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.458C>A (p.Ala153Asp) single nucleotide variant not specified [RCV004099099] Chr12:123608736 [GRCh38]
Chr12:124093283 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.745T>G (p.Cys249Gly) single nucleotide variant not specified [RCV004108575] Chr12:123613173 [GRCh38]
Chr12:124097720 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1076C>T (p.Thr359Ile) single nucleotide variant not specified [RCV004099098] Chr12:123617784 [GRCh38]
Chr12:124102331 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1429G>A (p.Val477Met) single nucleotide variant not specified [RCV004192425] Chr12:123619527 [GRCh38]
Chr12:124104074 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1050T>A (p.Ser350Arg) single nucleotide variant not specified [RCV004189127] Chr12:123617758 [GRCh38]
Chr12:124102305 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1350C>A (p.Ser450Arg) single nucleotide variant not specified [RCV004186406] Chr12:123619448 [GRCh38]
Chr12:124103995 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.644C>T (p.Ala215Val) single nucleotide variant not specified [RCV004138480] Chr12:123610031 [GRCh38]
Chr12:124094578 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.298G>A (p.Glu100Lys) single nucleotide variant not specified [RCV004269294] Chr12:123607483 [GRCh38]
Chr12:124092030 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1448C>T (p.Thr483Met) single nucleotide variant not specified [RCV004287250] Chr12:123619546 [GRCh38]
Chr12:124104093 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.31(chr12:121341598-124103434)x3 copy number gain See cases [RCV003329531] Chr12:121341598..124103434 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1193G>A (p.Arg398Lys) single nucleotide variant not specified [RCV004365586] Chr12:123618697 [GRCh38]
Chr12:124103244 [GRCh37]
Chr12:12q24.31
likely benign
NM_020936.3(DDX55):c.1063C>T (p.Arg355Cys) single nucleotide variant not specified [RCV004356756] Chr12:123617771 [GRCh38]
Chr12:124102318 [GRCh37]
Chr12:12q24.31
uncertain significance
GRCh37/hg19 12q24.31-24.33(chr12:121551496-133777902)x3 copy number gain not provided [RCV003484881] Chr12:121551496..133777902 [GRCh37]
Chr12:12q24.31-24.33
pathogenic
GRCh37/hg19 12q24.31-24.33(chr12:120880079-133777902)x3 copy number gain not provided [RCV003484880] Chr12:120880079..133777902 [GRCh37]
Chr12:12q24.31-24.33
pathogenic
GRCh37/hg19 12q24.31(chr12:123640263-124319101)x1 copy number loss not specified [RCV003986985] Chr12:123640263..124319101 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1358G>A (p.Arg453Gln) single nucleotide variant not specified [RCV004368059] Chr12:123619456 [GRCh38]
Chr12:124104003 [GRCh37]
Chr12:12q24.31
likely benign
NM_020936.3(DDX55):c.704C>T (p.Ala235Val) single nucleotide variant not specified [RCV004368064] Chr12:123610091 [GRCh38]
Chr12:124094638 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.974C>T (p.Thr325Ile) single nucleotide variant not specified [RCV004368067] Chr12:123616528 [GRCh38]
Chr12:124101075 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1139T>G (p.Ile380Ser) single nucleotide variant not specified [RCV004368053] Chr12:123617847 [GRCh38]
Chr12:124102394 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.116C>T (p.Thr39Ile) single nucleotide variant not specified [RCV004368055] Chr12:123605938 [GRCh38]
Chr12:124090485 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1201G>C (p.Ala401Pro) single nucleotide variant not specified [RCV004368057] Chr12:123618705 [GRCh38]
Chr12:124103252 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1498G>C (p.Glu500Gln) single nucleotide variant not specified [RCV004368060] Chr12:123619596 [GRCh38]
Chr12:124104143 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.206A>G (p.Glu69Gly) single nucleotide variant not specified [RCV004368061] Chr12:123606119 [GRCh38]
Chr12:124090666 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.280C>G (p.Leu94Val) single nucleotide variant not specified [RCV004368062] Chr12:123607465 [GRCh38]
Chr12:124092012 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.943C>T (p.Arg315Cys) single nucleotide variant not specified [RCV004368066] Chr12:123615303 [GRCh38]
Chr12:124099850 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1142A>G (p.Asn381Ser) single nucleotide variant not specified [RCV004368054] Chr12:123617850 [GRCh38]
Chr12:124102397 [GRCh37]
Chr12:12q24.31
likely benign
NM_020936.3(DDX55):c.685G>A (p.Gly229Ser) single nucleotide variant not specified [RCV004368063] Chr12:123610072 [GRCh38]
Chr12:124094619 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.988C>T (p.Arg330Trp) single nucleotide variant not specified [RCV004368068] Chr12:123616542 [GRCh38]
Chr12:124101089 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.1228A>G (p.Met410Val) single nucleotide variant not specified [RCV004368058] Chr12:123618732 [GRCh38]
Chr12:124103279 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.721C>T (p.Arg241Cys) single nucleotide variant not specified [RCV004368065] Chr12:123610108 [GRCh38]
Chr12:124094655 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.511G>C (p.Asp171His) single nucleotide variant not specified [RCV004611724] Chr12:123608789 [GRCh38]
Chr12:124093336 [GRCh37]
Chr12:12q24.31
uncertain significance
NC_000012.11:g.(?_120270555)_(124242579_?)dup duplication Deficiency of butyryl-CoA dehydrogenase [RCV004578383] Chr12:120270555..124242579 [GRCh37]
Chr12:12q24.23-24.31
uncertain significance
NM_020936.3(DDX55):c.775G>A (p.Val259Ile) single nucleotide variant not specified [RCV004611725] Chr12:123613203 [GRCh38]
Chr12:124097750 [GRCh37]
Chr12:12q24.31
uncertain significance
NM_020936.3(DDX55):c.23C>T (p.Ser8Phe) single nucleotide variant not specified [RCV004611726] Chr12:123602171 [GRCh38]
Chr12:124086718 [GRCh37]
Chr12:12q24.31
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2924
Count of miRNA genes:999
Interacting mature miRNAs:1233
Transcripts:ENST00000238146, ENST00000354291, ENST00000421670, ENST00000536079, ENST00000538744, ENST00000539934, ENST00000540763, ENST00000541259, ENST00000542286, ENST00000543016, ENST00000544429, ENST00000544738, ENST00000545042
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298449UAE2_HUrinary albumin excretion QTL 2 (human)20.005Urinary albumin excretionurine albumin:creatinine ratio (ACR)12102836889128836889Human
407344196GWAS993172_Hhigh density lipoprotein cholesterol measurement QTL GWAS993172 (human)3e-15high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)12123618347123618348Human
1643452BW104_HBody weight QTL 104 (human)1.890.005Body fat amountabdominal visceral12102395874128395874Human
407237692GWAS886668_Hapolipoprotein A 1 measurement QTL GWAS886668 (human)6e-14apolipoprotein A 1 measurementblood apolipoprotein AI level (CMO:0000520)12123618347123618348Human
407036094GWAS685070_Halcohol consumption measurement QTL GWAS685070 (human)7e-11alcohol consumption measurementethanol drink intake rate (CMO:0001407)12123620679123620680Human
407412374GWAS1061350_Halcohol consumption measurement QTL GWAS1061350 (human)1e-10alcohol consumption measurementethanol drink intake rate (CMO:0001407)12123620679123620680Human

Markers in Region
WI-12310  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,105,592 - 124,105,723UniSTSGRCh37
Build 3612122,671,545 - 122,671,676RGDNCBI36
Celera12123,702,028 - 123,702,159RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,066,936 - 121,067,067UniSTS
GeneMap99-GB4 RH Map12479.33UniSTS
Whitehead-RH Map12600.7UniSTS
NCBI RH Map12777.7UniSTS
RH98764  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,100,762 - 124,100,899UniSTSGRCh37
Build 3612122,666,715 - 122,666,852RGDNCBI36
Celera12123,697,198 - 123,697,335RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,062,126 - 121,062,263UniSTS
GeneMap99-GB4 RH Map12479.55UniSTS
G64577  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,092,069 - 124,092,362UniSTSGRCh37
Build 3612122,658,022 - 122,658,315RGDNCBI36
Celera12123,688,505 - 123,688,798RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,053,434 - 121,053,727UniSTS
SHGC-149620  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,097,202 - 124,097,501UniSTSGRCh37
Build 3612122,663,155 - 122,663,454RGDNCBI36
Celera12123,693,638 - 123,693,937RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,058,566 - 121,058,865UniSTS
TNG Radiation Hybrid Map1261097.0UniSTS
G20768  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,105,663 - 124,105,791UniSTSGRCh37
Build 3612122,671,616 - 122,671,744RGDNCBI36
Celera12123,702,099 - 123,702,227RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,067,007 - 121,067,135UniSTS
A006F32  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,105,663 - 124,105,791UniSTSGRCh37
Build 3612122,671,616 - 122,671,744RGDNCBI36
Celera12123,702,099 - 123,702,227RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,067,007 - 121,067,135UniSTS
GeneMap99-GB4 RH Map12479.33UniSTS
NCBI RH Map12778.6UniSTS
GC29S0405  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,091,865 - 124,092,271UniSTSGRCh37
Build 3612122,657,818 - 122,658,224RGDNCBI36
Celera12123,688,301 - 123,688,707RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,053,230 - 121,053,636UniSTS
GC29S06  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,093,101 - 124,093,454UniSTSGRCh37
Build 3612122,659,054 - 122,659,407RGDNCBI36
Celera12123,689,537 - 123,689,890RGD
HuRef12121,054,465 - 121,054,818UniSTS
GC29S08  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,097,586 - 124,097,891UniSTSGRCh37
Build 3612122,663,539 - 122,663,844RGDNCBI36
Celera12123,694,022 - 123,694,327RGD
HuRef12121,058,950 - 121,059,255UniSTS
STS-N26791  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3712124,105,264 - 124,105,480UniSTSGRCh37
Build 3612122,671,217 - 122,671,433RGDNCBI36
Celera12123,701,700 - 123,701,916RGD
Cytogenetic Map12q24.31UniSTS
HuRef12121,066,608 - 121,066,824UniSTS
GeneMap99-GB4 RH Map12479.55UniSTS
NCBI RH Map12776.8UniSTS
G38154  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17q12UniSTS
Cytogenetic Map3q26.1UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_020936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_135104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_135105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011538608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA403154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB046815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC055713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC117503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL833756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU619784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA806426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GQ891432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000238146   ⟹   ENSP00000238146
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,099 - 123,620,943 (+)Ensembl
Ensembl Acc Id: ENST00000354291   ⟹   ENSP00000346244
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,130 - 123,616,603 (+)Ensembl
Ensembl Acc Id: ENST00000421670   ⟹   ENSP00000442332
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,618,016 - 123,620,422 (+)Ensembl
Ensembl Acc Id: ENST00000536079
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,143 - 123,610,070 (+)Ensembl
Ensembl Acc Id: ENST00000538744   ⟹   ENSP00000443114
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,128 - 123,620,144 (+)Ensembl
Ensembl Acc Id: ENST00000539934
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,604,873 - 123,618,153 (+)Ensembl
Ensembl Acc Id: ENST00000540763   ⟹   ENSP00000446255
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,128 - 123,610,103 (+)Ensembl
Ensembl Acc Id: ENST00000541259
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,613,215 - 123,619,628 (+)Ensembl
Ensembl Acc Id: ENST00000542286
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,077 - 123,619,716 (+)Ensembl
Ensembl Acc Id: ENST00000543016
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,616,558 - 123,618,778 (+)Ensembl
Ensembl Acc Id: ENST00000544429
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,097 - 123,607,770 (+)Ensembl
Ensembl Acc Id: ENST00000544738   ⟹   ENSP00000442823
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,125 - 123,617,870 (+)Ensembl
Ensembl Acc Id: ENST00000545042
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl12123,602,099 - 123,607,662 (+)Ensembl
RefSeq Acc Id: NM_020936   ⟹   NP_065987
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,943 (+)NCBI
GRCh3712124,086,650 - 124,105,482 (+)NCBI
Build 3612122,652,625 - 122,671,435 (+)NCBI Archive
Celera12123,683,109 - 123,701,918 (+)RGD
HuRef12121,048,035 - 121,066,826 (+)ENTREZGENE
CHM1_112123,907,568 - 123,926,439 (+)NCBI
T2T-CHM13v2.012123,600,963 - 123,619,807 (+)NCBI
Sequence:
RefSeq Acc Id: NR_135104
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,943 (+)NCBI
CHM1_112123,907,568 - 123,926,439 (+)NCBI
T2T-CHM13v2.012123,600,963 - 123,619,807 (+)NCBI
Sequence:
RefSeq Acc Id: NR_135105
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,943 (+)NCBI
CHM1_112123,907,568 - 123,926,439 (+)NCBI
T2T-CHM13v2.012123,600,963 - 123,619,807 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011538608   ⟹   XP_011536910
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,619,619 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017019710   ⟹   XP_016875199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,581 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017019711   ⟹   XP_016875200
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,581 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017019712   ⟹   XP_016875201
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,604,021 - 123,620,581 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017019715   ⟹   XP_016875204
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,581 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017019716   ⟹   XP_016875205
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,581 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017019721   ⟹   XP_016875210
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,619,619 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047429221   ⟹   XP_047285177
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,581 (+)NCBI
RefSeq Acc Id: XM_047429222   ⟹   XP_047285178
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,620,581 (+)NCBI
RefSeq Acc Id: XM_047429223   ⟹   XP_047285179
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,606,072 - 123,620,581 (+)NCBI
RefSeq Acc Id: XM_047429224   ⟹   XP_047285180
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,619,619 (+)NCBI
RefSeq Acc Id: XM_047429225   ⟹   XP_047285181
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,618,779 (+)NCBI
RefSeq Acc Id: XM_047429226   ⟹   XP_047285182
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,618,778 (+)NCBI
RefSeq Acc Id: XM_047429227   ⟹   XP_047285183
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,619,619 (+)NCBI
RefSeq Acc Id: XM_047429228   ⟹   XP_047285184
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,618,746 (+)NCBI
RefSeq Acc Id: XM_047429229   ⟹   XP_047285185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,618,790 (+)NCBI
RefSeq Acc Id: XM_054372692   ⟹   XP_054228667
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372693   ⟹   XP_054228668
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372694   ⟹   XP_054228669
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372695   ⟹   XP_054228670
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,602,888 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372696   ⟹   XP_054228671
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372697   ⟹   XP_054228672
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372698   ⟹   XP_054228673
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372699   ⟹   XP_054228674
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372700   ⟹   XP_054228675
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,618,548 (+)NCBI
RefSeq Acc Id: XM_054372701   ⟹   XP_054228676
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,619,447 (+)NCBI
RefSeq Acc Id: XM_054372702   ⟹   XP_054228677
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,617,645 (+)NCBI
RefSeq Acc Id: XM_054372703   ⟹   XP_054228678
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,617,644 (+)NCBI
RefSeq Acc Id: XM_054372704   ⟹   XP_054228679
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,618,548 (+)NCBI
RefSeq Acc Id: XM_054372705   ⟹   XP_054228680
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,617,612 (+)NCBI
RefSeq Acc Id: XM_054372706   ⟹   XP_054228681
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,617,656 (+)NCBI
RefSeq Acc Id: XM_054372707   ⟹   XP_054228682
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,618,391 (+)NCBI
RefSeq Acc Id: XM_054372708   ⟹   XP_054228683
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,618,548 (+)NCBI
RefSeq Acc Id: XM_054372709   ⟹   XP_054228684
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.012123,600,963 - 123,618,548 (+)NCBI
Protein Sequences
Protein RefSeqs NP_065987 (Get FASTA)   NCBI Sequence Viewer  
  XP_011536910 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875199 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875200 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875201 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875204 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875205 (Get FASTA)   NCBI Sequence Viewer  
  XP_016875210 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285177 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285178 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285179 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285180 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285181 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285182 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285183 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285184 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285185 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228667 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228668 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228669 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228670 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228671 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228672 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228673 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228674 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228675 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228676 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228677 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228678 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228679 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228680 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228681 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228682 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228683 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228684 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH30020 (Get FASTA)   NCBI Sequence Viewer  
  AAH35911 (Get FASTA)   NCBI Sequence Viewer  
  ADO22294 (Get FASTA)   NCBI Sequence Viewer  
  BAB13421 (Get FASTA)   NCBI Sequence Viewer  
  BAB85021 (Get FASTA)   NCBI Sequence Viewer  
  BAG62656 (Get FASTA)   NCBI Sequence Viewer  
  CAH56233 (Get FASTA)   NCBI Sequence Viewer  
  EAW98419 (Get FASTA)   NCBI Sequence Viewer  
  EAW98420 (Get FASTA)   NCBI Sequence Viewer  
  EAW98421 (Get FASTA)   NCBI Sequence Viewer  
  EAW98422 (Get FASTA)   NCBI Sequence Viewer  
  EAW98423 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000238146
  ENSP00000238146.3
  ENSP00000346244.4
  ENSP00000442332.1
  ENSP00000442823.1
  ENSP00000443114.1
  ENSP00000446255.1
GenBank Protein Q8NHQ9 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_065987   ⟸   NM_020936
- UniProtKB: Q8IYH0 (UniProtKB/Swiss-Prot),   Q658L6 (UniProtKB/Swiss-Prot),   Q9HCH7 (UniProtKB/Swiss-Prot),   Q8NHQ9 (UniProtKB/Swiss-Prot),   A0A384N652 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011536910   ⟸   XM_011538608
- Peptide Label: isoform X14
- UniProtKB: Q8TEC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875204   ⟸   XM_017019715
- Peptide Label: isoform X5
- UniProtKB: F5H5U2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875210   ⟸   XM_017019721
- Peptide Label: isoform X15
- UniProtKB: Q8TEC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875199   ⟸   XM_017019710
- Peptide Label: isoform X1
- UniProtKB: A0A384N652 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875205   ⟸   XM_017019716
- Peptide Label: isoform X6
- UniProtKB: F5H5U2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875200   ⟸   XM_017019711
- Peptide Label: isoform X2
- UniProtKB: A0A384N652 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016875201   ⟸   XM_017019712
- Peptide Label: isoform X3
- UniProtKB: A0A384N652 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000442823   ⟸   ENST00000544738
Ensembl Acc Id: ENSP00000443114   ⟸   ENST00000538744
Ensembl Acc Id: ENSP00000346244   ⟸   ENST00000354291
Ensembl Acc Id: ENSP00000238146   ⟸   ENST00000238146
Ensembl Acc Id: ENSP00000442332   ⟸   ENST00000421670
Ensembl Acc Id: ENSP00000446255   ⟸   ENST00000540763
RefSeq Acc Id: XP_047285177   ⟸   XM_047429221
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047285178   ⟸   XM_047429222
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047285183   ⟸   XM_047429227
- Peptide Label: isoform X11
RefSeq Acc Id: XP_047285180   ⟸   XM_047429224
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047285185   ⟸   XM_047429229
- Peptide Label: isoform X13
RefSeq Acc Id: XP_047285181   ⟸   XM_047429225
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047285182   ⟸   XM_047429226
- Peptide Label: isoform X10
RefSeq Acc Id: XP_047285184   ⟸   XM_047429228
- Peptide Label: isoform X12
RefSeq Acc Id: XP_047285179   ⟸   XM_047429223
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054228668   ⟸   XM_054372693
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054228671   ⟸   XM_054372696
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054228676   ⟸   XM_054372701
- Peptide Label: isoform X16
RefSeq Acc Id: XP_054228674   ⟸   XM_054372699
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054228669   ⟸   XM_054372694
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054228667   ⟸   XM_054372692
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054228672   ⟸   XM_054372697
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054228673   ⟸   XM_054372698
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054228679   ⟸   XM_054372704
- Peptide Label: isoform X11
RefSeq Acc Id: XP_054228683   ⟸   XM_054372708
- Peptide Label: isoform X17
RefSeq Acc Id: XP_054228675   ⟸   XM_054372700
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054228684   ⟸   XM_054372709
- Peptide Label: isoform X15
RefSeq Acc Id: XP_054228682   ⟸   XM_054372707
- Peptide Label: isoform X14
RefSeq Acc Id: XP_054228681   ⟸   XM_054372706
- Peptide Label: isoform X13
RefSeq Acc Id: XP_054228677   ⟸   XM_054372702
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054228678   ⟸   XM_054372703
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054228680   ⟸   XM_054372705
- Peptide Label: isoform X12
RefSeq Acc Id: XP_054228670   ⟸   XM_054372695
- Peptide Label: isoform X3
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8NHQ9-F1-model_v2 AlphaFold Q8NHQ9 1-600 view protein structure

Promoters
RGD ID:6790182
Promoter ID:HG_KWN:16961
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000354291,   NM_020936,   UC001UFH.2
Position:
Human AssemblyChrPosition (strand)Source
Build 3612122,652,409 - 122,652,909 (+)MPROMDB
RGD ID:6790181
Promoter ID:HG_KWN:16962
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Lymphoblastoid
Transcripts:UC001UFJ.1,   UC001UFK.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3612122,656,381 - 122,658,017 (+)MPROMDB
RGD ID:6789850
Promoter ID:HG_KWN:16964
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Lymphoblastoid,   NB4
Transcripts:UC001UFL.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3612122,668,216 - 122,669,332 (+)MPROMDB
RGD ID:7225799
Promoter ID:EPDNEW_H18645
Type:initiation region
Name:DDX55_1
Description:DEAD-box helicase 55
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3812123,602,099 - 123,602,159EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:20085 AgrOrtholog
COSMIC DDX55 COSMIC
Ensembl Genes ENSG00000111364 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000238146 ENTREZGENE
  ENST00000238146.9 UniProtKB/Swiss-Prot
  ENST00000354291.8 UniProtKB/TrEMBL
  ENST00000421670.3 UniProtKB/Swiss-Prot
  ENST00000538744.5 UniProtKB/TrEMBL
  ENST00000540763.5 UniProtKB/TrEMBL
  ENST00000544738.5 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000111364 GTEx
HGNC ID HGNC:20085 ENTREZGENE
Human Proteome Map DDX55 Human Proteome Map
InterPro DEAD/DEAH_box_helicase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4217 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNA-helicase_DEAD-box_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNA_helicase_DEAD_Q_motif UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:57696 UniProtKB/Swiss-Prot
NCBI Gene 57696 ENTREZGENE
OMIM 620176 OMIM
PANTHER ATP-DEPENDENT RNA HELICASE DDX55 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNA HELICASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DEAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4217 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134984021 PharmGKB
PROSITE DEAD_ATP_HELICASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICASE_ATP_BIND_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Q_MOTIF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DEXDc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF4217 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A384N652 ENTREZGENE, UniProtKB/TrEMBL
  DDX55_HUMAN UniProtKB/Swiss-Prot
  E7EX41_HUMAN UniProtKB/TrEMBL
  F5H2I2_HUMAN UniProtKB/TrEMBL
  F5H5U2 ENTREZGENE, UniProtKB/TrEMBL
  F5H735_HUMAN UniProtKB/TrEMBL
  Q658L6 ENTREZGENE
  Q8IYH0 ENTREZGENE
  Q8NHQ9 ENTREZGENE
  Q8TEC9 ENTREZGENE, UniProtKB/TrEMBL
  Q9HCH7 ENTREZGENE
UniProt Secondary Q658L6 UniProtKB/Swiss-Prot
  Q8IYH0 UniProtKB/Swiss-Prot
  Q9HCH7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-12 DDX55  DEAD-box helicase 55    DEAD (Asp-Glu-Ala-Asp) box polypeptide 55  Symbol and/or name change 5135510 APPROVED