E130308A19Rik (RIKEN cDNA E130308A19 gene) - Rat Genome Database

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Gene: E130308A19Rik (RIKEN cDNA E130308A19 gene) Mus musculus
Analyze
Symbol: E130308A19Rik
Name: RIKEN cDNA E130308A19 gene
RGD ID: 1322144
MGI Page MGI
Description: Is expressed in neural retina. Orthologous to human KIAA1958 (KIAA1958).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC230259; MGC47072; uncharacterized protein KIAA1958 homolog
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39459,626,116 - 59,757,649 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl459,626,211 - 59,761,439 (+)EnsemblGRCm39 Ensembl
GRCm38459,626,116 - 59,757,649 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl459,626,211 - 59,761,439 (+)EnsemblGRCm38mm10GRCm38
MGSCv37459,639,093 - 59,767,175 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36459,720,381 - 59,848,357 (+)NCBIMGSCv36mm8
Celera459,606,867 - 59,671,011 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map432.73NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
E130308A19RikMouseCOVID-19  ISOKIAA1958 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744

1 to 20 of 31 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
E130308A19RikMouse2,2',4,4'-Tetrabromodiphenyl ether increases expressionISOKIAA1958 (Homo sapiens)64804642 more ...CTDPMID:19095052
E130308A19RikMouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOKiaa1958 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of KIAA1958 mRNACTDPMID:33387578
E130308A19RikMouse2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOKiaa1958 (Rattus norvegicus)64804642 more ...CTDPMID:32109520
E130308A19RikMouse2-hydroxypropanoic acid decreases expressionISOKIAA1958 (Homo sapiens)6480464Lactic Acid results in decreased expression of KIAA1958 mRNACTDPMID:30851411
E130308A19RikMouseall-trans-retinoic acid decreases expressionISOKIAA1958 (Homo sapiens)6480464Tretinoin results in decreased expression of KIAA1958 mRNACTDPMID:21934132
E130308A19RikMousearistolochic acid A decreases expressionISOKIAA1958 (Homo sapiens)6480464aristolochic acid I results in decreased expression of KIAA1958 mRNACTDPMID:33212167
E130308A19RikMousearsane multiple interactionsISOKIAA1958 (Homo sapiens)6480464[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of KIAA1958 mRNACTDPMID:39836092
E130308A19RikMousearsenic atom multiple interactionsISOKIAA1958 (Homo sapiens)6480464[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of KIAA1958 mRNACTDPMID:39836092
E130308A19RikMouseatrazine increases expressionISOKIAA1958 (Homo sapiens)6480464Atrazine results in increased expression of KIAA1958 mRNACTDPMID:22378314
E130308A19RikMousebenzo[a]pyrene decreases methylationISOKIAA1958 (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of KIAA1958 5' UTRCTDPMID:27901495
E130308A19RikMousebisphenol A decreases expressionISOKiaa1958 (Rattus norvegicus)6480464bisphenol A results in decreased expression of KIAA1958 mRNACTDPMID:30816183
E130308A19RikMousebisphenol A increases expressionISOKiaa1958 (Rattus norvegicus)6480464bisphenol A results in increased expression of KIAA1958 mRNACTDPMID:25181051
E130308A19RikMousecisplatin decreases expressionISOKIAA1958 (Homo sapiens)6480464Cisplatin results in decreased expression of KIAA1958 mRNACTDPMID:27594783
E130308A19RikMousedorsomorphin multiple interactionsISOKIAA1958 (Homo sapiens)6480464[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...CTDPMID:27188386
E130308A19RikMousedoxorubicin decreases expressionISOKIAA1958 (Homo sapiens)6480464Doxorubicin results in decreased expression of KIAA1958 mRNACTDPMID:29803840
E130308A19RikMouseFR900359 increases phosphorylationISOKIAA1958 (Homo sapiens)6480464FR900359 results in increased phosphorylation of KIAA1958 proteinCTDPMID:37730182
E130308A19RikMousegentamycin decreases expressionISOKiaa1958 (Rattus norvegicus)6480464Gentamicins results in decreased expression of KIAA1958 mRNACTDPMID:33387578
E130308A19RikMouseparacetamol increases expressionISOKiaa1958 (Rattus norvegicus)6480464Acetaminophen results in increased expression of KIAA1958 mRNACTDPMID:33387578
E130308A19RikMousePCB138 decreases expressionISOKiaa1958 (Rattus norvegicus)64804642 more ...CTDPMID:23829299
E130308A19RikMouserac-lactic acid decreases expressionISOKIAA1958 (Homo sapiens)6480464Lactic Acid results in decreased expression of KIAA1958 mRNACTDPMID:30851411

1 to 20 of 31 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
E130308A19RikMousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Molecular Function

  

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
E130308A19RikMouseincreased circulating cholesterol level  IEA 5509061 MGI 
E130308A19RikMouseincreased circulating HDL cholesterol level  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:18799693   PMID:21267068   PMID:34709266   PMID:38355793  



E130308A19Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39459,626,116 - 59,757,649 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl459,626,211 - 59,761,439 (+)EnsemblGRCm39 Ensembl
GRCm38459,626,116 - 59,757,649 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl459,626,211 - 59,761,439 (+)EnsemblGRCm38mm10GRCm38
MGSCv37459,639,093 - 59,767,175 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36459,720,381 - 59,848,357 (+)NCBIMGSCv36mm8
Celera459,606,867 - 59,671,011 (+)NCBICelera
Cytogenetic Map4B3NCBI
cM Map432.73NCBI
KIAA1958
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389112,486,827 - 112,669,397 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9112,486,827 - 112,669,397 (+)EnsemblGRCh38hg38GRCh38
GRCh379115,249,107 - 115,431,677 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369114,289,069 - 114,462,527 (+)NCBINCBI36Build 36hg18NCBI36
Celera985,748,149 - 85,921,746 (+)NCBICelera
Cytogenetic Map9q32NCBI
HuRef984,933,972 - 85,020,336 (+)NCBIHuRef
CHM1_19115,395,802 - 115,570,186 (+)NCBICHM1_1
T2T-CHM13v2.09124,658,017 - 124,840,630 (+)NCBIT2T-CHM13v2.0
Kiaa1958
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8579,286,708 - 79,432,859 (+)NCBIGRCr8
mRatBN7.2574,491,762 - 74,637,929 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl574,491,752 - 74,632,408 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0576,858,341 - 77,001,736 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl576,860,515 - 76,997,951 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0580,995,168 - 81,136,544 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4577,855,734 - 77,869,538 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera573,370,158 - 73,448,190 (+)NCBICelera
Cytogenetic Map5q24NCBI
Kiaa1958
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541914,756,207 - 14,822,836 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541914,756,207 - 14,822,763 (-)NCBIChiLan1.0ChiLan1.0
KIAA1958
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21126,735,254 - 26,945,146 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1926,772,402 - 26,947,506 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0983,617,616 - 83,790,092 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19111,856,133 - 111,947,123 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9111,856,133 - 111,941,887 (+)Ensemblpanpan1.1panPan2
KIAA1958
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11167,028,149 - 67,119,645 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1167,034,076 - 67,113,036 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1165,367,892 - 65,531,080 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01168,088,929 - 68,250,385 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1168,128,987 - 68,241,469 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11166,605,107 - 66,757,557 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01166,628,732 - 66,781,220 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01167,373,081 - 67,534,522 (+)NCBIUU_Cfam_GSD_1.0
Kiaa1958
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947182,281,241 - 182,413,558 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936559855,929 - 920,621 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936559851,726 - 985,328 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA1958
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,202,368 - 253,351,695 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,202,380 - 253,358,829 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21283,985,047 - 284,182,304 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA1958
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11226,864,909 - 27,036,685 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1226,870,187 - 27,036,618 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603515,761,416 - 15,933,568 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa1958
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476022,342,156 - 22,498,671 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476022,340,709 - 22,498,696 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in E130308A19Rik
6612 total Variants

Predicted Target Of
Summary Value
Count of predictions:3033
Count of miRNA genes:963
Interacting mature miRNAs:1357
Transcripts:ENSMUST00000052420, ENSMUST00000070150, ENSMUST00000152797
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 39 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
25314308Mlh1fc1_mMLH1 foci count 1 (mouse)44850000076918237Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
1301786Bpq3_mblood pressure QTL 3 (mouse)Not determined44240224076402381Mouse
10412178Habiir2_mhyperoxic acute lung injury imprinted region 2 (mouse)Not determined43945212663283678Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
1301213Lgth3_mbody length 3 (mouse)Not determined45010026284100408Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse

1 to 10 of 39 rows
07.MMHAP27FLC1.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38459,712,993 - 59,713,157UniSTSGRCm38
MGSCv37459,725,865 - 59,726,029UniSTSGRCm37
Celera459,629,718 - 59,629,882UniSTS
Cytogenetic Map4B3UniSTS
Whitehead_YAC4 UniSTS






1 to 21 of 21 rows
RefSeq Transcripts NM_001015681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_153158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK040775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK202710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL806512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB647178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 21 of 21 rows

Ensembl Acc Id: ENSMUST00000052420   ⟹   ENSMUSP00000062493
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,626,243 - 59,721,401 (+)Ensembl
GRCm38.p6 Ensembl459,626,243 - 59,721,401 (+)Ensembl
Ensembl Acc Id: ENSMUST00000070150   ⟹   ENSMUSP00000065702
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,626,211 - 59,761,439 (+)Ensembl
GRCm38.p6 Ensembl459,626,211 - 59,761,439 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,691,189 - 59,720,243 (+)Ensembl
GRCm38.p6 Ensembl459,691,189 - 59,720,243 (+)Ensembl
Ensembl Acc Id: ENSMUST00000221633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl459,733,258 - 59,753,039 (+)Ensembl
GRCm38.p6 Ensembl459,733,258 - 59,753,039 (+)Ensembl
RefSeq Acc Id: NM_001015681   ⟹   NP_001015681
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,211 - 59,754,303 (+)NCBI
GRCm38459,626,211 - 59,754,303 (+)NCBI
MGSCv37459,639,093 - 59,767,175 (+)RGD
Celera459,606,867 - 59,671,011 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_153158   ⟹   NP_694798
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,211 - 59,721,401 (+)NCBI
GRCm38459,626,211 - 59,721,401 (+)NCBI
MGSCv37459,639,093 - 59,767,175 (+)RGD
Celera459,606,867 - 59,671,011 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006537855   ⟹   XP_006537918
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,116 - 59,756,640 (+)NCBI
GRCm38459,626,116 - 59,756,640 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537858   ⟹   XP_006537921
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,689,090 - 59,757,649 (+)NCBI
GRCm38459,689,090 - 59,757,649 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537861   ⟹   XP_006537924
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,116 - 59,734,618 (+)NCBI
GRCm38459,626,116 - 59,734,618 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537864   ⟹   XP_006537927
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,116 - 59,719,634 (+)NCBI
GRCm38459,626,116 - 59,719,634 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011250008   ⟹   XP_011248310
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,407 - 59,756,640 (+)NCBI
GRCm38459,626,243 - 59,756,640 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163991   ⟹   XP_036019884
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,407 - 59,729,452 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004941861
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39459,626,116 - 59,756,640 (+)NCBI
Sequence:
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: NP_001015681   ⟸   NM_001015681
- Peptide Label: isoform 2
- UniProtKB: Q8BN62 (UniProtKB/Swiss-Prot),   B1AX79 (UniProtKB/Swiss-Prot),   Q8K1X8 (UniProtKB/Swiss-Prot),   Q8C4P0 (UniProtKB/Swiss-Prot),   Q0P6E2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_694798   ⟸   NM_153158
- Peptide Label: isoform 1
- UniProtKB: Q8C4P0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006537918   ⟸   XM_006537855
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006537924   ⟸   XM_006537861
- Peptide Label: isoform X2
- UniProtKB: Q8C4P0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006537927   ⟸   XM_006537864
- Peptide Label: isoform X3
- Sequence:
DUF3504

Name Modeler Protein Id AA Range Protein Structure
AF-Q8C4P0-F1-model_v2 AlphaFold Q8C4P0 1-716 view protein structure

RGD ID:6883540
Promoter ID:EPDNEW_M5221
Type:initiation region
Name:E130308A19Rik_1
Description:Mus musculus RIKEN cDNA E130308A19 gene , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38459,626,216 - 59,626,276EPDNEW


1 to 24 of 24 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000045071 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000052420 ENTREZGENE
  ENSMUST00000052420.7 UniProtKB/Swiss-Prot
  ENSMUST00000070150 ENTREZGENE
  ENSMUST00000070150.11 UniProtKB/Swiss-Prot
InterPro DUF3504 UniProtKB/Swiss-Prot
  KIAA1958 UniProtKB/Swiss-Prot
KEGG Report mmu:230259 UniProtKB/Swiss-Prot
MGD MGI:2442164 ENTREZGENE
NCBI Gene 230259 ENTREZGENE
PANTHER PTHR46963 UniProtKB/Swiss-Prot
  SIMILAR TO RIKEN CDNA E130308A19 UniProtKB/Swiss-Prot
Pfam DUF3504 UniProtKB/Swiss-Prot
PhenoGen E130308A19Rik PhenoGen
UniProt B1AX79 ENTREZGENE
  K1958_MOUSE UniProtKB/Swiss-Prot
  Q0P6E2 ENTREZGENE, UniProtKB/TrEMBL
  Q80WW0_MOUSE UniProtKB/TrEMBL
  Q8BN62 ENTREZGENE
  Q8C4P0 ENTREZGENE
  Q8K1X8 ENTREZGENE
UniProt Secondary B1AX79 UniProtKB/Swiss-Prot
  Q8BN62 UniProtKB/Swiss-Prot
  Q8K1X8 UniProtKB/Swiss-Prot
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