Fam174a (family with sequence similarity 174, member A)

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Gene: Fam174a (family with sequence similarity 174, member A) Mus musculus

Analyze

Symbol:

Fam174a

Name:

family with sequence similarity 174, member A

RGD ID:

1320605

MGI Page

MGI

Description:

Predicted to be located in membrane. Orthologous to human FAM174A (family with sequence similarity 174 member A).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2310044D20Rik; Fam174; membrane protein FAM174A; Naa6; Tmem157; transmembrane protein 157

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	95,241,353 - 95,263,009 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	95,241,348 - 95,263,009 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	95,313,628 - 95,335,284 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	95,313,623 - 95,335,284 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	97,210,205 - 97,231,861 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	97,144,150 - 97,165,471 (+)	NCBI		MGSCv36	mm8
Celera	1	98,172,416 - 98,194,072 (+)	NCBI		Celera
Cytogenetic Map	1	D	NCBI
cM Map	1	47.76	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

1,2-dimethylhydrazine (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

antimycin A (ISO)

atrazine (ISO)

bilirubin IXalpha (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

butan-1-ol (ISO)

carbon nanotube (EXP)

chlorpyrifos (EXP)

cisplatin (ISO)

clofibrate (EXP)

crocidolite asbestos (EXP)

cyclosporin A (ISO)

DDT (ISO)

deguelin (ISO)

Dibutyl phosphate (ISO)

epoxiconazole (EXP)

ethyl methanesulfonate (ISO)

folic acid (EXP)

formaldehyde (ISO)

lead(0) (ISO)

leflunomide (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

oxaliplatin (ISO)

ozone (ISO)

picoxystrobin (ISO)

quercetin (ISO)

rotenone (ISO)

sodium arsenite (ISO)

tebufenpyrad (ISO)

thioacetamide (ISO)

titanium dioxide (EXP)

topotecan (ISO)

triphenyl phosphate (ISO)

tungsten (EXP)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

membrane (IEA)

Molecular Function

molecular_function (ND)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15489334	PMID:16141072	PMID:16141073	PMID:21267068

Genomics

Comparative Map Data

Fam174a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	95,241,353 - 95,263,009 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	95,241,348 - 95,263,009 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	95,313,628 - 95,335,284 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	95,313,623 - 95,335,284 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	97,210,205 - 97,231,861 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	97,144,150 - 97,165,471 (+)	NCBI		MGSCv36	mm8
Celera	1	98,172,416 - 98,194,072 (+)	NCBI		Celera
Cytogenetic Map	1	D	NCBI
cM Map	1	47.76	NCBI

FAM174A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	100,535,374 - 100,586,741 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	100,535,338 - 100,586,741 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	99,871,078 - 99,922,445 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	99,899,023 - 99,950,339 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	95,818,712 - 95,870,036 (+)	NCBI		Celera
Cytogenetic Map	5	q21.1	NCBI
HuRef	5	95,054,071 - 95,105,396 (+)	NCBI		HuRef
CHM1_1	5	99,303,131 - 99,354,447 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	101,043,697 - 101,095,060 (+)	NCBI		T2T-CHM13v2.0

Fam174a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	103,190,144 - 103,208,419 (+)	NCBI		GRCr8
mRatBN7.2	9	95,742,815 - 95,761,083 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	95,742,927 - 95,761,081 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	104,167,440 - 104,185,594 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	109,295,426 - 109,313,580 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	107,638,792 - 107,656,946 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	102,862,761 - 102,881,046 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	102,862,890 - 102,881,038 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	102,475,439 - 102,493,703 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	94,575,773 - 94,593,929 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	94,785,252 - 94,803,406 (+)	NCBI
Celera	9	93,215,983 - 93,234,139 (+)	NCBI		Celera
Cytogenetic Map	9	q36	NCBI

Fam174a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	12,877,982 - 12,911,864 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	12,877,465 - 12,912,096 (-)	NCBI	ChiLan1.0	ChiLan1.0

FAM174A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	95,786,824 - 95,838,530 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	93,940,472 - 93,992,177 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	95,863,985 - 95,915,633 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	101,533,818 - 101,585,468 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	101,533,818 - 101,585,468 (+)	Ensembl	panpan1.1		panPan2

FAM174A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	9,974,049 - 10,009,405 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	9,986,930 - 10,009,244 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	11,317,501 - 11,353,058 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	9,866,584 - 9,902,093 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	9,879,467 - 9,901,755 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	9,805,499 - 9,841,180 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	9,827,750 - 9,863,476 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	9,981,515 - 10,023,349 (-)	NCBI		UU_Cfam_GSD_1.0

Fam174a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	165,387,008 - 165,434,757 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936523	3,572,913 - 3,620,252 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936523	3,572,959 - 3,620,127 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM174A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	106,555,289 - 106,583,694 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	106,555,242 - 106,581,912 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	110,536,597 - 110,563,200 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM174A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	4,056,450 - 4,100,550 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	4,056,430 - 4,100,600 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666036	10,292,124 - 10,336,239 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam174a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	18,960,960 - 18,997,925 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	18,961,538 - 18,997,110 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	358
Count of miRNA genes:	248
Interacting mature miRNAs:	287
Transcripts:	ENSMUST00000059975
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11039528	Ccc3_m	colitis susceptibility in the Collaborative Cross 3 (mouse)					1	3680142	195051546	Mouse
15039333	Nmrs1_m	NAFLD-associated magnetic resonance shift 1 (mouse)					1	89786512	123786512	Mouse
27095901	Scvln8_m	sacral vertebrae length 2, 10 week (mouse)					1	94127725	172027567	Mouse
10045976	Tir6_m	trypanosome infection response 6 (mouse)			Not determined		1	93536855	120529678	Mouse
1357847	Jckm2_m	juvenile cystic kidney modifier 2 (mouse)			Not determined		1	74991977	133290937	Mouse
4141627	Bwq7_m	body weight, QTL 7 (mouse)			Not determined		1	92940909	124497796	Mouse
4142394	Mssq1_m	mandible size and shape QTL 1 (mouse)			Not determined			73615692	107615830	Mouse
10412185	Hcs9_m	hepatocarcinogenesis susceptibility 9 (mouse)			Not determined		1	63854690	189303617	Mouse
1558928	Mord2_m	modifier of retinal degeneration 2 (mouse)			Not determined		1	77123115	110536075	Mouse
12879491	Hfnq1_m	hair follicle number QTL 1 (mouse)					1	93310310	123636759	Mouse
1301722	Cia9_m	collagen induced arthritis QTL 9 (mouse)			Not determined		1	45783900	189303617	Mouse
13824984	Twq5_m	testis weight QTL 5 (mouse)					1	3069992	184732197	Mouse
14697706	Stsl3a_m	Salmonella typhimurium susceptibility locus 3a (mouse)					1	77476637	95827725	Mouse
12790991	Aath1_m	aortic arch atherosclerosis 1 (mouse)					1	86483929	120483929	Mouse
1357721	Sle17_m	systematic lupus erythematosus susceptibility 17 (mouse)			Not determined		1	39132808	126445310	Mouse
10412238	Alpq5_m	alcohol preference QTL 5 (mouse)			Not determined		1	82832635	116832635	Mouse
1302146	Cocrb1_m	cocaine related behavior 1 (mouse)			Not determined		1	70133533	104139557	Mouse
1357760	Synch3_m	synechia 3 (mouse)			Not determined		1	92901442	126901550	Mouse
1558860	W10q7_m	weight 10 weeks QTL 7 (mouse)			Not determined		1	34760138	150193871	Mouse
4141347	Reb1_m	repetitive behavior 1 (mouse)			Not determined			91468266	100413667	Mouse
12791004	Aath7_m	aortic arch atherosclerosis 7 (mouse)					1	82832635	116832635	Mouse
4141725	Wbcq4_m	white blood cell quantitative locus 4 (mouse)			Not determined		1	79858683	113858791	Mouse
12050069	Nabq1_m	nasal bone morphology QTL 1 (mouse)					1	79858683	113858791	Mouse
1300976	Bmd19_m	bone mineral density 19 (mouse)			Not determined		1	73266214	108838414	Mouse
1357488	Splq3_m	spleen weight QTL 3 (mouse)			Not determined		1	34760138	150193871	Mouse
4141914	Gcsfis_m	G-CSF induced splenomegaly (mouse)			Not determined			74516235	148715579	Mouse
27095928	Pglq6_m	pelvic girdle length QTL 6, 10 week (mouse)					1	75976637	148775742	Mouse
27095931	Pglq1_m	pelvic girdle length QTL 1, 5 week (mouse)					1	75976637	128527737	Mouse
13452395	Leusq2_m	leucocytosis susceptibility QTL 2 (mouse)					1	80245593	126386517	Mouse
1301748	Abbp1_m	A/J and C57BL/6 blood pressure 1 (mouse)			Not determined		1	62946755	120529678	Mouse
1301304	Hrq3_m	heart rate quantitative locus 3 (mouse)			Not determined		1	73615692	107615830	Mouse
1357439	Popoa_m	premature ovulation and primary oocyte arrest (mouse)			Not determined		1	82643189	135615379	Mouse
4142291	Aec2_m	autoimmune exocrinopathy 2 (mouse)			Not determined			52457737	182250592	Mouse
1357753	Kidq2_m	kidney weight QTL 2 (mouse)			Not determined		1	34760138	150193871	Mouse
1300989	Lrdg1_m	light induced retinal degeneration 1 (mouse)			Not determined		1	73755175	147125370	Mouse
4141329	Mleu1_m	myeloid leukemia survival 1 (mouse)			Not determined			89786512	123786512	Mouse
11667074	Led2_m	late embryonic death 2 (mouse)					1	85696027	117195081	Mouse
27095918	Ulnl1_m	ulna length 1, 5 week (mouse)					1	67339159	129727737	Mouse
27095913	Scvln2_m	sacral vertebrae length 2, 5 week (mouse)					1	94127725	148775742	Mouse
1301350	Nidd4k_m	Nidd4 on KK-A (mouse)			Not determined		7	82291982	147125370	Mouse
1300841	Ssial1_m	susceptibility to sialadenitis 1 (mouse)			Not determined		1	63920002	153557562	Mouse
26884448	Sklq1_m	skull length QTL 1, 5 week (mouse)					1	75976637	181327565	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB154249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC129561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK017318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK020633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK033948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK084861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK148807	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB693858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC021428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000059975 ⟹ ENSMUSP00000057670

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	95,241,348 - 95,263,009 (+)	Ensembl
GRCm38.p6 Ensembl	1	95,313,623 - 95,335,284 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000186780 ⟹ ENSMUSP00000139943

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	95,241,353 - 95,255,670 (+)	Ensembl
GRCm38.p6 Ensembl	1	95,313,628 - 95,327,945 (+)	Ensembl

RefSeq Acc Id:

NM_026321 ⟹ NP_080597

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	95,241,353 - 95,263,009 (+)	NCBI
GRCm38	1	95,313,628 - 95,335,284 (+)	ENTREZGENE
MGSCv37	1	97,210,205 - 97,231,861 (+)	RGD
Celera	1	98,172,416 - 98,194,072 (+)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

GATGTACGAACTTCCGGTTGTCCCGGCAGGCTGCTGCCGCCGCCGCCGCCGAAGCCACCCGGCG
CAGTCTCAGCCACCCGCTCTCCTCCGGAGAGTCGGCTCTGCGGTTCCGGCGCGCCCATGGTCGG
CGCTGCGGACCGGGAGGCCGGCCCGGCGGCTGCGGCGTGCTGAGAGGCCGGCGTGGAGACCATG
CCGACCCCGCGCGGCTGCTCCGGGCCTTGCCACTTCCTGGCTCCGGCCTTCGTGTTGTTGTTGC
TGCCCGCTCTGAGCGGGTCCGGGGCGGTACCGTCGATGGTGGTCAGGGAGGTGCAGGAGTCCAA
GTCTCCCAAGCCCGGGCCGCACACGCTGTCGCCGCTTCCTCCGGGCCCCACCGCGGCCCAGCCT
CGGGGCCAAGCTCAGTCTGATGCTGCCGGGCTGCCAGGCGCGGAGAGCCGCAATGACAGCATCC
CCGGGGCGGGGTCTGAGGCGGACGGCCTCGAAGGGAAGGCCGGAGAAGGTTCCCAGGGTGGCAG
CCTGGCCGTGAGTCCCAGTCCTGGCGACAAACCCATGACCCAGCGGGCCCTGACCGTGTTGGTG
GTGGTGAGCGCCGCGGTGCTGGTGTACTTCGTGGTCAGGACCGTCAGGATGAGAAGAAGAAACC
GCAAGACTAGGAGGTACGGTGTTTTGGATACGAACATAGAGAACATGGAATTGACACCTTTAGA
GCAAGACGATGAGGATGATGACAACACATTGTTTGATGCCAATCATCCTAGAAGATGAGTATGT
GCCTTTCATGAGAAGATTTCCATATTTCTACTGAAGAACAGAGTTTCTATGTCTAAGGAATAAG
AAGCCACTCTATCAAGGGGAGGGGAATTTAAGTTACATACATTATGTCAACCTTTAATTTGTTG
ATACTCAATCCATAGTGCATCATTTGGTTACAACTTTGTATATTTGGAACTGCTGTATTTATTA
GTGTGCTCTGTGTTATTAGGGACAAACTGTACTATGCTGGATTTTCTGTTTGAAAATTATTTTA
AAACTGTTTTCTGCAGAGCTTTTGTCCCTGTCTTTTACCATATTATTGTAACTTGGCTTTCTTT
ATTAATCCATTGTTGTTGCTTTCGTTTTGTCAGTGTCATAATGTAAAGAACTATAAGCCACAGC
TAACTGCTATGAATAAATACAATTCTACTAAACTTTTTCCCGTTTTTATGGAGAAAGAGCCAAA
TCTACTGTTATTTTTGAGTTTGTAAGTAGTAATAATTGTCTGTGCTAAAGTATGAAAAAGAATA
AATATGATTTAAAATTATTTAAGTGGTACAGATAGAATGTGTTTATAAAATAAATACTGCATAA
TTATATATTAACATGTGTTTTATATTTATATACTGAGTCCAAAACATATGTTTCCTTGACTATA
GTGTCTCAGTGGATCTCTGAGTTTGAGGTCAAGGAAGAATCAGACAAAGAAGGTTGACTATCTT
GCTAGAGATTAGATATTTTTGGAAATCTATGAATTTCAAATACATTTGTAGTATAATGAGAGAG
AGTTAATATAGATTGCATGGTTATAAGTCTGAGTCTTGTCAGAGATCAAGAGATTGAAAATTTT
CATCTGTAGACTTCGAAGTCAGGATTTTATCTAGAGACTAGCATTATCTTGCAACAAATCCATT
CCCACCCAGGTCTGATTTTTACATATTTTAAAATTTAGAAGAAAACTTAGAGAAAACTCCATTG
CTTGTTAGCATCAGTGAGGTCATTGAAATGTGTGACAAAATGGAATGATCCCGAGTCATACTGG
TTTACAAGGATGTTGTTATTTATTAACATCAACTTTATGATGTCTACTTCTACTGTGTTTGACA
GTTTCTCTGTAGTAAAGCTGGTTTAAAAAATCTACCTCAAAAGCTAAACTTGGCTCTTTTATAG
ACTTCTGCTTCATGATGATGAATTAATTTGTTACTGACTAAAGCCAACCTTGAGGCTACTCTCA
TTCAACAAGGCCACAATAAAATCTCCTCTCAGAATGAGAAAAAGATAAAAAGAAAAATGGTTGT
ATATTTAAGTATAACTCAGACCTGTAATATTTCAAATAAAACTCAAAACTTCACATACT

hide sequence

Protein Sequences


Protein RefSeqs	NP_080597	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH21428	(Get FASTA)	NCBI Sequence Viewer
	BAB26509	(Get FASTA)	NCBI Sequence Viewer
	BAB26567	(Get FASTA)	NCBI Sequence Viewer
	BAB30690	(Get FASTA)	NCBI Sequence Viewer
	BAB32159	(Get FASTA)	NCBI Sequence Viewer
	BAC28523	(Get FASTA)	NCBI Sequence Viewer
	BAE28669	(Get FASTA)	NCBI Sequence Viewer
	BAI44634	(Get FASTA)	NCBI Sequence Viewer
	EDL39920	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000057670
	ENSMUSP00000057670.7
	ENSMUSP00000139943.2
GenBank Protein	Q9D3L0	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_080597 ⟸ NM_026321
- Peptide Label:	precursor
- UniProtKB:	Q9D6W5 (UniProtKB/Swiss-Prot), Q9D238 (UniProtKB/Swiss-Prot), Q8VDR1 (UniProtKB/Swiss-Prot), Q8CC46 (UniProtKB/Swiss-Prot), Q3UF92 (UniProtKB/Swiss-Prot), Q9D6Z3 (UniProtKB/Swiss-Prot), Q9D3L0 (UniProtKB/Swiss-Prot), C9K0Z9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPTPRGCSGPCHFLAPAFVLLLLPALSGSGAVPSMVVREVQESKSPKPGPHTLSPLPPGPTAAQ PRGQAQSDAAGLPGAESRNDSIPGAGSEADGLEGKAGEGSQGGSLAVSPSPGDKPMTQRALTVL VVVSAAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPLEQDDEDDDNTLFDANHPRR hide sequence

Ensembl Acc Id:

ENSMUSP00000057670 ⟸ ENSMUST00000059975

Ensembl Acc Id:

ENSMUSP00000139943 ⟸ ENSMUST00000186780

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9D3L0-F1-model_v2	AlphaFold	Q9D3L0	1-190	view protein structure

Promoters

RGD ID:

6874590

Promoter ID:

EPDNEW_M746

Type:

initiation region

Name:

Fam174a_1

Description:

Mus musculus family with sequence similarity 174, member A ,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	1	95,313,693 - 95,313,753	EPDNEW

RGD ID:

6818629

Promoter ID:

MM_KWN:1726

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_026321, UC007CEX.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	1	97,209,996 - 97,210,677 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1914948	AgrOrtholog
Ensembl Genes	ENSMUSG00000051185	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000059975	ENTREZGENE
	ENSMUST00000059975.8	UniProtKB/Swiss-Prot
	ENSMUST00000186780.2	UniProtKB/Swiss-Prot
InterPro	DUF1180	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:67698	UniProtKB/Swiss-Prot
MGD	MGI:1914948	ENTREZGENE
NCBI Gene	67698	ENTREZGENE
PANTHER	MEMBRANE PROTEIN FAM174A	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR28607	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	DUF1180	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Fam174a	PhenoGen
UniProt	C9K0Z9	ENTREZGENE, UniProtKB/TrEMBL
	F174A_MOUSE	UniProtKB/Swiss-Prot
	Q3UF92	ENTREZGENE
	Q8CC46	ENTREZGENE
	Q8VDR1	ENTREZGENE
	Q9D238	ENTREZGENE
	Q9D3L0	ENTREZGENE
	Q9D6W5	ENTREZGENE
	Q9D6Z3	ENTREZGENE
UniProt Secondary	Q3UF92	UniProtKB/Swiss-Prot
	Q8CC46	UniProtKB/Swiss-Prot
	Q8VDR1	UniProtKB/Swiss-Prot
	Q9D238	UniProtKB/Swiss-Prot
	Q9D6W5	UniProtKB/Swiss-Prot
	Q9D6Z3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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