Advanced Search (OLGA)

Gene: TTC9 (tetratricopeptide repeat domain 9) Homo sapiens

Analyze

Symbol:

TTC9

Name:

tetratricopeptide repeat domain 9

RGD ID:

1318967

HGNC Page

HGNC:20267

Description:

Predicted to act upstream of or within bone development. Implicated in opiate dependence.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

KIAA0227; tetratricopeptide repeat protein 9A; TPR repeat protein 9A; TTC9A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Ttc9 (tetratricopeptide repeat domain 9)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Ttc9 (tetratricopeptide repeat domain 9)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Chinchilla lanigera (long-tailed chinchilla):	Ttc9 (tetratricopeptide repeat domain 9)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	TTC9 (tetratricopeptide repeat domain 9)	NCBI	Ortholog
Canis lupus familiaris (dog):	TTC9 (tetratricopeptide repeat domain 9)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ttc9 (tetratricopeptide repeat domain 9)	NCBI	Ortholog
Sus scrofa (pig):	TTC9 (tetratricopeptide repeat domain 9)	HGNC	EggNOG, Ensembl, NCBI, OMA, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):	TTC9 (tetratricopeptide repeat domain 9)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Ttc9 (tetratricopeptide repeat domain 9)	NCBI	Ortholog
Alliance orthologs ³
Mus musculus (house mouse):	Ttc9 (tetratricopeptide repeat domain 9)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Ttc9 (tetratricopeptide repeat domain 9)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	ttc9.L	Alliance	DIOPT (Xenbase)
Xenopus tropicalis (tropical clawed frog):	ttc9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	ttc9.S	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	70,641,916 - 70,675,366 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	70,641,916 - 70,675,366 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	71,108,633 - 71,142,083 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	70,178,257 - 70,211,830 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	14	51,172,455 - 51,206,028 (+)	NCBI		Celera
Cytogenetic Map	14	q24.2	NCBI
HuRef	14	51,277,148 - 51,310,717 (+)	NCBI		HuRef
CHM1_1	14	71,046,680 - 71,080,246 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	64,847,902 - 64,881,350 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

opiate dependence (EXP,IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (ISO)

8-Br-cAMP (EXP)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (EXP)

amitrole (ISO)

atrazine (ISO)

benzo[a]pyrene (EXP)

bisphenol A (EXP,ISO)

cadmium atom (EXP)

cadmium dichloride (EXP)

calcitriol (EXP)

carbon nanotube (ISO)

chloroprene (ISO)

cisplatin (EXP,ISO)

copper(II) sulfate (EXP)

corosolic acid (EXP)

coumestrol (EXP)

Cuprizon (ISO)

cyclosporin A (EXP)

dibutyl phthalate (ISO)

dioxygen (ISO)

diuron (ISO)

dorsomorphin (EXP)

doxorubicin (EXP)

endosulfan (ISO)

fenvalerate (ISO)

furan (ISO)

kojic acid (EXP)

lead(0) (EXP)

malathion (EXP)

methimazole (ISO)

N-methyl-4-phenylpyridinium (EXP)

nickel atom (EXP)

ozone (ISO)

paracetamol (ISO)

paraquat (ISO)

perfluorohexanesulfonic acid (ISO)

phenylmercury acetate (EXP)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

resveratrol (EXP)

SB 431542 (EXP)

sodium arsenite (EXP)

Soman (ISO)

sulfadimethoxine (ISO)

testosterone enanthate (EXP)

tetrachloromethane (ISO)

thioacetamide (ISO)

titanium dioxide (ISO)

triphenyl phosphate (EXP)

valproic acid (EXP)

zoledronic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bone development (IEA,ISO)

Phenotype Annotations Click to see Annotation Detail View

Human Phenotype

Addictive opioid use (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
3.	Substance dependence low-density whole genome association study in two distinct American populations.	Yu Y, etal., Hum Genet. 2008 Jun;123(5):495-506. doi: 10.1007/s00439-008-0501-0. Epub 2008 Apr 26.

Additional References at PubMed

PMID:9039502	PMID:12477932	PMID:15489334	PMID:16678794	PMID:18699990	PMID:22917536	PMID:25217961	PMID:25798063	PMID:30021884	PMID:30325323	PMID:33961781	PMID:35063084
PMID:35831314	PMID:35906200	PMID:38293978

Genomics

Comparative Map Data

TTC9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	70,641,916 - 70,675,366 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	70,641,916 - 70,675,366 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	71,108,633 - 71,142,083 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	70,178,257 - 70,211,830 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	14	51,172,455 - 51,206,028 (+)	NCBI		Celera
Cytogenetic Map	14	q24.2	NCBI
HuRef	14	51,277,148 - 51,310,717 (+)	NCBI		HuRef
CHM1_1	14	71,046,680 - 71,080,246 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	64,847,902 - 64,881,350 (+)	NCBI		T2T-CHM13v2.0

Ttc9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	81,678,023 - 81,714,331 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	81,678,023 - 81,714,331 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	81,631,249 - 81,667,557 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	81,631,249 - 81,667,557 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	82,732,356 - 82,765,928 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	82,550,217 - 82,583,789 (+)	NCBI		MGSCv36	mm8
Celera	12	83,098,495 - 83,131,977 (+)	NCBI		Celera
Cytogenetic Map	12	D1	NCBI
cM Map	12	37.85	NCBI

Ttc9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	107,064,527 - 107,099,361 (+)	NCBI		GRCr8
mRatBN7.2	6	101,333,274 - 101,368,110 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	101,333,141 - 101,368,110 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	101,484,199 - 101,519,018 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	101,783,388 - 101,818,207 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	101,154,399 - 101,189,235 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	105,364,668 - 105,399,500 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	105,364,668 - 105,399,500 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	113,510,835 - 113,545,667 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	105,495,936 - 105,530,999 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	6	99,168,031 - 99,202,888 (+)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

Ttc9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955523	4,438,674 - 4,471,049 (-)	NCBI	ChiLan1.0	ChiLan1.0

TTC9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	71,760,138 - 71,793,953 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	70,976,652 - 71,010,466 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	51,229,734 - 51,262,455 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	70,100,391 - 70,132,551 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	70,100,391 - 70,130,915 (+)	Ensembl	panpan1.1		panPan2

TTC9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	44,358,130 - 44,392,062 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	44,357,641 - 44,387,737 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	44,021,651 - 44,055,504 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	44,580,694 - 44,614,521 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	44,580,694 - 44,613,616 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	44,234,500 - 44,274,511 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	44,279,640 - 44,313,502 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	44,640,561 - 44,674,646 (+)	NCBI		UU_Cfam_GSD_1.0

Ttc9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	31,757,305 - 31,796,572 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936488	302,502 - 311,483 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TTC9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	94,218,649 - 94,254,730 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	94,218,436 - 94,254,472 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	100,537,831 - 100,574,711 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TTC9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	47,845,463 - 47,878,891 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	47,846,449 - 47,877,325 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	36,067,908 - 36,102,438 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ttc9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	30,532,480 - 30,559,914 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	30,503,322 - 30,560,074 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TTC9
15 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 14q24.1-31.1(chr14:69562099-81975384)x1	copy number loss	See cases [RCV000134154]	Chr14:69562099..81975384 [GRCh38] Chr14:70028816..82441728 [GRCh37] Chr14:69098569..81511481 [NCBI36] Chr14:14q24.1-31.1	pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20151149-106855263)x3	copy number gain	See cases [RCV000135543]	Chr14:20151149..106855263 [GRCh38] Chr14:20619308..107263478 [GRCh37] Chr14:19689148..106334523 [NCBI36] Chr14:14q11.2-32.33	pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20043514-106877229)x3	copy number gain	See cases [RCV000143373]	Chr14:20043514..106877229 [GRCh38] Chr14:20511673..107285437 [GRCh37] Chr14:19581513..106356482 [NCBI36] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19794561-107234280)x3	copy number gain	See cases [RCV000446256]	Chr14:19794561..107234280 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q23.2-32.33(chr14:62493932-107285437)x3	copy number gain	See cases [RCV000448557]	Chr14:62493932..107285437 [GRCh37] Chr14:14q23.2-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:20511673-107285437)	copy number gain	See cases [RCV000512041]	Chr14:20511673..107285437 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q24.1-24.2(chr14:68035240-73568130)x1	copy number loss	See cases [RCV000512344]	Chr14:68035240..73568130 [GRCh37] Chr14:14q24.1-24.2	likely pathogenic
GRCh37/hg19 14q11.1-32.33(chr14:19000422-107289053)x3	copy number gain	not provided [RCV000738412]	Chr14:19000422..107289053 [GRCh37] Chr14:14q11.1-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19280733-107287663)x3	copy number gain	not provided [RCV000738413]	Chr14:19280733..107287663 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19327823-107287663)x3	copy number gain	not provided [RCV000738414]	Chr14:19327823..107287663 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q24.2(chr14:71040157-71240681)x3	copy number gain	not provided [RCV000751048]	Chr14:71040157..71240681 [GRCh37] Chr14:14q24.2	benign
GRCh37/hg19 14q24.2(chr14:71139279-71598042)x3	copy number gain	not provided [RCV000751049]	Chr14:71139279..71598042 [GRCh37] Chr14:14q24.2	benign
GRCh37/hg19 14q22.2-24.3(chr14:54654001-75828024)x3	copy number gain	14q22.2q24.3 duplication [RCV001506967]	Chr14:54654001..75828024 [GRCh37] Chr14:14q22.2-24.3	likely pathogenic
GRCh37/hg19 14q13.3-32.33(chr14:37671058-106985955)x2	copy number gain	See cases [RCV002286356]	Chr14:37671058..106985955 [GRCh37] Chr14:14q13.3-32.33	pathogenic
NM_015351.2(TTC9):c.329T>C (p.Leu110Pro)	single nucleotide variant	not specified [RCV004194827]	Chr14:70642458 [GRCh38] Chr14:71109175 [GRCh37] Chr14:14q24.2	likely benign
NM_015351.2(TTC9):c.352G>A (p.Glu118Lys)	single nucleotide variant	not specified [RCV004153257]	Chr14:70642481 [GRCh38] Chr14:71109198 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.481G>C (p.Gly161Arg)	single nucleotide variant	not specified [RCV004098440]	Chr14:70667638 [GRCh38] Chr14:71134355 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.23C>G (p.Ala8Gly)	single nucleotide variant	not specified [RCV004196585]	Chr14:70642152 [GRCh38] Chr14:71108869 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.193G>A (p.Ala65Thr)	single nucleotide variant	not specified [RCV004329153]	Chr14:70642322 [GRCh38] Chr14:71109039 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.122G>A (p.Arg41Lys)	single nucleotide variant	not specified [RCV004353164]	Chr14:70642251 [GRCh38] Chr14:71108968 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.17C>T (p.Ser6Leu)	single nucleotide variant	not specified [RCV004362555]	Chr14:70642146 [GRCh38] Chr14:71108863 [GRCh37] Chr14:14q24.2	uncertain significance
GRCh37/hg19 14q23.1-32.33(chr14:58894502-107227240)x3	copy number gain	not provided [RCV003485036]	Chr14:58894502..107227240 [GRCh37] Chr14:14q23.1-32.33	pathogenic
NM_015351.2(TTC9):c.284G>C (p.Gly95Ala)	single nucleotide variant	not specified [RCV004479288]	Chr14:70642413 [GRCh38] Chr14:71109130 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.308C>T (p.Pro103Leu)	single nucleotide variant	not specified [RCV004479289]	Chr14:70642437 [GRCh38] Chr14:71109154 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.550C>T (p.Leu184Phe)	single nucleotide variant	not specified [RCV004479291]	Chr14:70667707 [GRCh38] Chr14:71134424 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.596A>G (p.Asn199Ser)	single nucleotide variant	not specified [RCV004479292]	Chr14:70671082 [GRCh38] Chr14:71137799 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.625A>T (p.Met209Leu)	single nucleotide variant	not specified [RCV004479293]	Chr14:70671111 [GRCh38] Chr14:71137828 [GRCh37] Chr14:14q24.2	uncertain significance
NM_015351.2(TTC9):c.82C>T (p.Pro28Ser)	single nucleotide variant	not specified [RCV004682725]	Chr14:70642211 [GRCh38] Chr14:71108928 [GRCh37] Chr14:14q24.2	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1716
Count of miRNA genes:	922
Interacting mature miRNAs:	1083
Transcripts:	ENST00000256367
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCh38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597244168	GWAS1340242_H	sarcopenia QTL GWAS1340242 (human)		0.000006	sarcopenia		14	70668226	70668227	Human
597223215	GWAS1319289_H	heel bone mineral density, urate measurement QTL GWAS1319289 (human)		8e-11	heel bone mineral density, urate measurement	blood uric acid level (CMO:0000501)	14	70653617	70653618	Human
597160092	GWAS1256166_H	3-carboxy-4-methyl-5-propyl-2-furanpropanoate CMPF measurement QTL GWAS1256166 (human)		0.000004	3-carboxy-4-methyl-5-propyl-2-furanpropanoate CMPF measurement		14	70644644	70644645	Human
597429280	GWAS1525354_H	protein measurement QTL GWAS1525354 (human)		7e-09	protein measurement		14	70671127	70671128	Human
597177975	GWAS1274049_H	tetratricopeptide repeat protein 9B measurement QTL GWAS1274049 (human)		5e-39	tetratricopeptide repeat protein 9B measurement		14	70652446	70652447	Human

Markers in Region

G38116

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,140,433 - 71,140,589	UniSTS	GRCh37
Build 36	14	70,210,186 - 70,210,342	RGD	NCBI36
Celera	14	51,204,384 - 51,204,540	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,309,073 - 51,309,229	UniSTS

A005T47

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,141,823 - 71,142,063	UniSTS	GRCh37
Build 36	14	70,211,576 - 70,211,816	RGD	NCBI36
Celera	14	51,205,774 - 51,206,014	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,310,463 - 51,310,703	UniSTS
GeneMap99-GB4 RH Map	14	174.53	UniSTS

G20494

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,141,823 - 71,142,063	UniSTS	GRCh37
Build 36	14	70,211,576 - 70,211,816	RGD	NCBI36
Celera	14	51,205,774 - 51,206,014	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,310,463 - 51,310,703	UniSTS

G38256

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,112,906 - 71,113,142	UniSTS	GRCh37
Build 36	14	70,182,659 - 70,182,895	RGD	NCBI36
Celera	14	51,176,857 - 51,177,093	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,281,550 - 51,281,786	UniSTS

SHGC-3622

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,125,785 - 71,125,899	UniSTS	GRCh37
Build 36	14	70,195,538 - 70,195,652	RGD	NCBI36
Celera	14	51,189,737 - 51,189,851	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,294,416 - 51,294,540	UniSTS
TNG Radiation Hybrid Map	14	24972.0	UniSTS

D14S906

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,141,858 - 71,142,027	UniSTS	GRCh37
Build 36	14	70,211,611 - 70,211,780	RGD	NCBI36
Celera	14	51,205,809 - 51,205,978	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,310,498 - 51,310,667	UniSTS

RH25433

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,141,619 - 71,141,772	UniSTS	GRCh37
Build 36	14	70,211,372 - 70,211,525	RGD	NCBI36
Celera	14	51,205,570 - 51,205,723	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,310,259 - 51,310,412	UniSTS
GeneMap99-GB4 RH Map	14	174.43	UniSTS

G38244

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,138,536 - 71,138,857	UniSTS	GRCh37
Build 36	14	70,208,289 - 70,208,610	RGD	NCBI36
Celera	14	51,202,487 - 51,202,808	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,307,176 - 51,307,497	UniSTS

G20823

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,139,255 - 71,139,359	UniSTS	GRCh37
Build 36	14	70,209,008 - 70,209,112	RGD	NCBI36
Celera	14	51,203,206 - 51,203,310	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,307,895 - 51,307,999	UniSTS

A006H41

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,139,255 - 71,139,359	UniSTS	GRCh37
Build 36	14	70,209,008 - 70,209,112	RGD	NCBI36
Celera	14	51,203,206 - 51,203,310	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,307,895 - 51,307,999	UniSTS
GeneMap99-GB4 RH Map	14	174.43	UniSTS

STS-Z40406

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,139,151 - 71,139,245	UniSTS	GRCh37
Build 36	14	70,208,904 - 70,208,998	RGD	NCBI36
Celera	14	51,203,102 - 51,203,196	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,307,791 - 51,307,885	UniSTS
GeneMap99-GB4 RH Map	14	177.79	UniSTS
NCBI RH Map	14	666.1	UniSTS

WI-20573

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	71,139,110 - 71,139,259	UniSTS	GRCh37
Build 36	14	70,208,863 - 70,209,012	RGD	NCBI36
Celera	14	51,203,061 - 51,203,210	RGD
Cytogenetic Map	14	q24.2	UniSTS
HuRef	14	51,307,750 - 51,307,899	UniSTS
GeneMap99-GB4 RH Map	14	174.43	UniSTS
Whitehead-RH Map	14	251.9	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2432	2788	2246	4941	1722	2344	5	621	1923	463	2246	7261	6434	51	3725	848	1734	1611	175	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_012648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_015351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC004816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL357153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC047950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX407741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471061	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D86980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KF455928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000256367 ⟹ ENSP00000256367

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	70,641,916 - 70,675,366 (+)	Ensembl

RefSeq Acc Id:

NM_015351 ⟹ NP_056166

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	70,641,916 - 70,675,366 (+)	NCBI
GRCh37	14	71,108,504 - 71,142,077 (+)	RGD
Build 36	14	70,178,257 - 70,211,830 (+)	NCBI Archive
Celera	14	51,172,455 - 51,206,028 (+)	RGD
HuRef	14	51,277,148 - 51,310,717 (+)	ENTREZGENE
CHM1_1	14	71,046,680 - 71,080,246 (+)	NCBI
T2T-CHM13v2.0	14	64,847,902 - 64,881,350 (+)	NCBI

Sequence:

show sequence

GTCCGAGGCGGCGGCGGCGGCGGCTGGAGCAGCCTCTGGCAGCAGCGGGGAGAATGGGAGTGCG
GGGCGCCAGACCGCCGCGGGGTGTCACGGCCGCCACGAAGCCTGCGAGGCGCGGGGCCGGCGCC
CGCGGCTTTTAAACCCGGGAAGGCGCGGCGGCGGCGGCGGCGGCGGGCAGATCGCGGCGCGCAC
CAGGCGCCGGGGCGGCGGCCGAATGGAGAGAAAGGGCTCGGCGGCCGGGGCCAAGGGGAACCCG
AGCCCGCCCGCGGCCGGAGAGGGGCAGCGGCCACCGCCGCCGCTGTGCGTCCCGGGCGGCGGCG
GAGGAGCCCCAGCGAGGGGCCAGGTCGGGGCGGCGGCCGAGCCGGCCGAGCTCATCCGACGAGC
GCACGAGTTCAAAAGCCAAGGGGCGCAGTGCTACAAGGACAAGAAATTCCGTGAAGCCATAGGC
AAATACCACCGGGCGTTGCTGGAGCTGAAGGGGCTGCTGCCGCCCCCCGGGGAACGGGAGCGGG
ACTCGCGCCCGGCCTCCCCGGCTGGGGCCCTGAAGCCCGGCCGCCTCTCGGAGGAGCAGAGCAA
GACGGTGGAAGCCATCGAGATCGACTGTTACAACAGCCTGGCAGCCTGCCTGCTCCAGGCTGAG
CTGGTAAACTATGAACGAGTCAAGGAATATTGCCTCAAAGTCTTGAAGAAGGAAGGGGAGAACT
TCAAGGCCCTTTACCGGTCTGGTGTGGCCTTCTACCACCTTGGGGACTATGACAAAGCACTCTA
CTACCTGAAAGAAGCAAGGACCCAACAACCAACAGACACCAACGTGATTCGGTATATCCAGCTG
ACGGAGATGAAACTCAGCCGATGCTCCCAGAGAGAAAAAGAAGCCATGTAACCAGGAAGCAGCT
CCAGAGCTGCGCCCACGCCTGACCGGGGACTTCCAGGCATCCCCTGGCAGAGAGCCCCGTCCTG
GATTCTGTCCCTTTCTCCCCACTTCTTCTGGCTCCTCATTTTTCCTCCTGTTGCACCCCAGCTC
TTTGTCTCCTCCCAGTACGAAAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAA
TGGAGACATCCTCTCCTCTAGCAGGTCAGCGACTGAGAGGGGCCTGACTTCTGCTGGGACAGCT
GGAGAGGAGTCTCATGGGCTGGGATGCTGTTGTGGCTTTGACTTTGGCCAGTGCTTCTGACAGA
GGCGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTT
CCACACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGA
GACAAACAGAGAAGCGCTGGTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGTTCCCA
CCCCCACCCCCCACCCGTCACTTAGCCCCTGCCTCCTTCCCCCACTCGTTGTCTTGGCTTGTGC
TTTCTCCTCTCCCCATCGGGGATCCGAGACTCTGCCAGGATTCACATGCCACTGAAGCCCACTC
AGTGCCCTCTGGTGACCACACATACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGACCG
CAGAAGGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTTGACTGTGTAGGTGACAGGGAGGG
AAAGATGATGGCCAGGGGAAAGAGCATCGTATAGGCTAGGGGATTGAACTGTGGACTGATTCAG
TGTAAATAAAAACAAATTAACAGGTAGTAGTTCCTGTCAGTTCTGTTGGAAGCAGCCCACTCCC
TCACTTTTACTCCTTCCTCCAACCCTCAATCAGAGCTACTTACAGCCAGGCAGGATGGGGCTTT
CCCCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGTGCTTTTAA
GAGTGGGCTGGGATTGTGGAGACTGCCCAGGGGCTTGGCTTTGTCAGAACTTGTACAATCTTCT
TTTGATGAAATTATCTGAACTCAACATCTAGCACATAGAATGTGTTCAACAAATGCTTGTTGAA
TGAATAAATTATGACTGCAGACTGGCTCTCCTGCCTTAAACTAATTTCATCCCAGCCTAGTCTC
CTGATGTCTGTGCTCGTTATGCTATGCCATGTTGCTTCAGTCAAACAAGAAACACTTACTGAGG
GCATATTGTTTGCCCATCATTGTGCAATATGCTGTGGGACATGGGATGTCGTCTCAGTCTTCAA
GGAAATGGAAGGGTTAAGAAATGCATATGAGATTATTACCAATGACACCGTTAATTTATATGAT
GCTTTAAAATTATCAGAGCACTTTCATGTATTTTTCGTGTGACTAGTGAAAAAGACAATGTTGT
ACAAAATTAAAATATATACAGATGCAATAATGTGAATAGTTAGGATTTATTAAATGCATTATCT
TCAGATCTTTACATGTATAATCTCATTTCTTTCATGCAGTTACTCTGGGATACTGTTCCCATTT
GATGGGTAAGAATATTGAAAACCAGAAAAATTAATTATCCCAAGGTTGCATGGCCTTTAGTGGC
ATAGCTAGGATTTGAACCAGGCCTGCCTGACTCCAGAGCTCTGGCTAGTATCTATGCTATACTT
AGTTGCCTCTCTGTAAGTATAATATTGGGCAATTATAACCATTTGAGAACAGGACAATATGTAT
TAACCTGAAAAGTGTTCATGATGTCAGTGATAGTACATGGCCTCCTTATGTATTTACTCAAGGG
CCCCAAAAGACCAGAGGCCAGAATCCCTAGTAGTCAGAGCAGTGACAGGTCAGAAAAAGGCAGC
TGAGGTCCAATAGTTATGTCTGTGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCT
CAACAACTCACCTAGCATTCATCACCCATCCCCAGCATTGGGAAAGGGTCACAATTAAGACCGA
AAGGAAACACAAAGTTAAATATGGGTTAATTATGTAAGCAGATGCCCCACCACGGCAGGATCCA
ATCACAGCCGAGGGGCCCAGAAGAGAGCAGCGTAAGTTATATTCACATAGTTCCCCAAAGGCTT
TCAACGGGGGCTACAGGAAGGTGCTAGAAATATTGAGGGGCCTGCCATTACTCACCTAGAGCTC
ACTCTCTGGAGAAGAGGAAAAGGAAGAAGCTATTTCAGCTGCCACATTCTCCCCAATCCCTACT
ATATTATGCTGTCTTTCCTCTTCCTCCTAGCTGGCTTTACATGACCCTAACCCAAAACTACCCT
ATGGCCCCACACGGGAATGTGTTCAAACGCCCCGACCCCCACCCCCACCCCCATTCCCAAGCCT
CCAACTTAGAACGTTTGTGATTTGGCAGATGGTTTGTTAGGATCTGAAGGATGAAGAGAAGGGT
AGAGGTCACCTGGAGAATGAGTTCAAACTGCCAGGGTCTTCCCTTGGTCTTTGTGCGTCAGGAA
GGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAGAGGTCTTGTTTACATGAGTGTGCTG
GGGCAGGGCTGGACAATCCAGGATATGATTGTAGCCATCCCATGTAGAAAGATCAAAAACCAGA
ACGAAATGAAGACAGCCTCTCAGAACCTCATAGAACAAGCGTCCAGGTCATCTGCTTGTTTGGT
GACTTAGATATACAGGCTTACTGGAACTCCATTCACTGTGACCTGAAGTTAAATAATCCCAAAG
AGAAAAAGCTACCTGGGGTATTGGTTGATGTTTGGGGTGATAGGGCTGAATTTTCTGTGCATTT
GTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAAATCTTCAGCTTCCTT
CTCCTCATCCCTCCCCAAAACAAGAACTGTGATTTAATTCCGTACGTTGCGGATGTCACTGCTG
ACCTATGTAGCTGGAGTACTAATCAGGCATCTGACCTGCACTGTCATCCCCTGCCTGGACTTTT
GCGATGGACTCTTTGGGGGAAAAACTAACGCTTTTTAATTATTGTGAAAGCATCATGTGTGTAT
TGTAGAAGTTTTAGGAAAAAAAGGACAAAATCCAATCCATAAGCTTACCACCCAAGACAAACGT
GTATTCTTTTGAATATACCTTTTAGTTCTTTTTGGTGTAAATGTACACACGCACACACAGTTGT
GGATTTTTTTAAACAAAAACTGGATACACTGAATATACTCTTTAATAACTTTTCAAGTGTGTAT
TTATATTTTAGAATATGTAATCCTACACAGATACAAAATTCAAAAAGTACAAACTGCTCTGTAG
TCAGAAGTAAATCTTCTCCCTACCCCGTCTGCCAGCATCTAGTTTCCCTCTAATTTATTTTGCA
TCCTAGTGGAGATGCTTACACATTGTCAAACATATGTATATATTCTTTTATCACACACAAATGG
CAGCATATTGGACACTTTTTGTTTTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACA
TTTTCGGCATATCAAACTTTCTCAACAGCATCTTCATTGTATGGATGGACCCTTTTTTTATCAT
CAATCCTCAAATAGTGATTATTTCATTTGTTCCCAATCTTCATTGTAAATAGTGTTGCAACTGA
CATTCTTGTAGCTAAATTTTGCACATGTCTATAACGATTTCCTTAGGATAAACTCCAAGAAGAG
ACTTGCTTGGCTATTTTTAAGAATTTTGATACATGTTGCCAACCACCCTCCAGAAAGTTTGTAC
CAAAACGCTCTCCTATTTGGATCCTAGAGAGTACCCTGTTTCCTGCACCCTAACACTAGGTATC
ATCACTTATCAAATCTTTCCCAATTTGGTAGCTGGGATAATAGTATGTCAATGTTATTTTAACT
TTCTTTGATTCTTCGCGAATAACATTTTCATATGCTTATTGACCATTTGTACTTCTTTCTTTGT
GAATTTTCTATTTATTTGATATTGGTATGTTTATTATCAATTTGTAATTTTATTAAGAATATTA
TTTTTGTCAAGAAATGCTGCAAATATGCTTTCCAAGTGCTTTGCTTTCAAATTTTGTTTATGGT
GCTTTTTGACATACATAAATTCTTAATTCTGCAATTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_056166	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH47950	(Get FASTA)	NCBI Sequence Viewer
	BAA13216	(Get FASTA)	NCBI Sequence Viewer
	EAW81043	(Get FASTA)	NCBI Sequence Viewer
	EAW81044	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000256367
	ENSP00000256367.2
GenBank Protein	Q92623	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_056166 ⟸ NM_015351

- UniProtKB:

Q92623 (UniProtKB/Swiss-Prot), Q86WT2 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQG
AQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEI
DCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEART
QQPTDTNVIRYIQLTEMKLSRCSQREKEAM

hide sequence

Ensembl Acc Id:

ENSP00000256367 ⟸ ENST00000256367

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q92623-F1-model_v2	AlphaFold	Q92623	1-222	view protein structure

Promoters

RGD ID:

6791997

Promoter ID:

HG_KWN:19690

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, K562, Lymphoblastoid

Transcripts:

NM_015351, UC001XMH.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	14	70,177,706 - 70,179,317 (-)	MPROMDB

RGD ID:

7228037

Promoter ID:

EPDNEW_H19764

Type:

initiation region

Name:

TTC9_1

Description:

tetratricopeptide repeat domain 9

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H19765 EPDNEW_H19766

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	70,641,663 - 70,641,723	EPDNEW

RGD ID:

7228039

Promoter ID:

EPDNEW_H19765

Type:

initiation region

Name:

TTC9_2

Description:

tetratricopeptide repeat domain 9

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H19764 EPDNEW_H19766

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	70,641,788 - 70,641,848	EPDNEW

RGD ID:

7228041

Promoter ID:

EPDNEW_H19766

Type:

initiation region

Name:

TTC9_3

Description:

tetratricopeptide repeat domain 9

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H19764 EPDNEW_H19765

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	70,641,916 - 70,641,976	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:20267	AgrOrtholog
COSMIC	TTC9	COSMIC
Ensembl Genes	ENSG00000133985	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000256367	ENTREZGENE
	ENST00000256367.3	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.40.10	UniProtKB/Swiss-Prot
GTEx	ENSG00000133985	GTEx
HGNC ID	HGNC:20267	ENTREZGENE
Human Proteome Map	TTC9	Human Proteome Map
InterPro	Immunophilin_FKBP-type	UniProtKB/Swiss-Prot
	TPR-like_helical_dom_sf	UniProtKB/Swiss-Prot
	TPR_2	UniProtKB/Swiss-Prot
	TPR_repeat	UniProtKB/Swiss-Prot
KEGG Report	hsa:23508	UniProtKB/Swiss-Prot
NCBI Gene	23508	ENTREZGENE
OMIM	610488	OMIM
PANTHER	PEPTIDYLPROLYL ISOMERASE	UniProtKB/Swiss-Prot
	TETRATRICOPEPTIDE REPEAT DOMAIN 9	UniProtKB/Swiss-Prot
Pfam	TPR_2	UniProtKB/Swiss-Prot
PharmGKB	PA134905515	PharmGKB
PROSITE	TPR	UniProtKB/Swiss-Prot
	TPR_REGION	UniProtKB/Swiss-Prot
SMART	TPR	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48452	UniProtKB/Swiss-Prot
UniProt	Q86WT2	ENTREZGENE
	Q92623	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q86WT2	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Manual Human Phenotype Annotations - RGD

Send us a Message

Imported Disease Annotations - CTD

Manual Human Phenotype Annotations - RGD