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Gene: TXNDC16 (thioredoxin domain containing 16) Homo sapiens

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Symbol:

TXNDC16

Name:

thioredoxin domain containing 16

RGD ID:

1315553

HGNC Page

HGNC:19965

Description:

Located in endoplasmic reticulum lumen.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ERp90; KIAA1344; thioredoxin domain-containing protein 16

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	52,430,596 - 52,552,505 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	52,429,472 - 52,552,547 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	52,897,314 - 53,019,223 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	51,967,059 - 52,088,963 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	14	32,764,912 - 32,886,888 (-)	NCBI		Celera
Cytogenetic Map	14	q22.1	NCBI
HuRef	14	33,057,647 - 33,180,093 (-)	NCBI		HuRef
CHM1_1	14	52,836,496 - 52,958,271 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	46,637,669 - 46,760,351 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TXNDC16	Human	(+)-schisandrin B	multiple interactions	ISO	Txndc16 (Rattus norvegicus)	6480464	schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of TXNDC16 mRNA]	CTD	PMID:31150632
TXNDC16	Human	1,2-dimethylhydrazine	multiple interactions	ISO	Txndc16 (Mus musculus)	6480464	Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of TXNDC16 mRNA]	CTD	PMID:22206623
TXNDC16	Human	1,2-dimethylhydrazine	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of TXNDC16 mRNA	CTD	PMID:22206623
TXNDC16	Human	17alpha-ethynylestradiol	affects expression	ISO	Txndc16 (Mus musculus)	6480464	Ethinyl Estradiol affects the expression of TXNDC16 mRNA	CTD	PMID:17555576
TXNDC16	Human	17beta-estradiol	multiple interactions	ISO	Txndc16 (Rattus norvegicus)	6480464	[bisphenol A co-treated with Estradiol] results in increased expression of TXNDC16 mRNA	CTD	PMID:26496021
TXNDC16	Human	17beta-estradiol	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Estradiol results in decreased expression of TXNDC16 mRNA	CTD	PMID:39298647
TXNDC16	Human	17beta-estradiol	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Estradiol results in decreased expression of TXNDC16 mRNA	CTD	PMID:32145629
TXNDC16	Human	17beta-hydroxy-5alpha-androstan-3-one	increases expression	EXP		6480464	Dihydrotestosterone results in increased expression of TXNDC16 mRNA	CTD	PMID:29581250
TXNDC16	Human	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of TXNDC16 mRNA	CTD	PMID:20106945 and PMID:21632981
TXNDC16	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of TXNDC16 mRNA	CTD	PMID:33387578
TXNDC16	Human	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Txndc16 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of TXNDC16 mRNA	CTD	PMID:24680724
TXNDC16	Human	2,4,6-trinitrobenzenesulfonic acid	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Trinitrobenzenesulfonic Acid results in decreased expression of TXNDC16 mRNA	CTD	PMID:17982090
TXNDC16	Human	3,4-methylenedioxymethamphetamine	increases expression	ISO	Txndc16 (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of TXNDC16 mRNA	CTD	PMID:20188158
TXNDC16	Human	4,4'-sulfonyldiphenol	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	bisphenol S results in decreased expression of TXNDC16 mRNA	CTD	PMID:39298647
TXNDC16	Human	acrylamide	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Acrylamide results in increased expression of TXNDC16 mRNA	CTD	PMID:28959563
TXNDC16	Human	aflatoxin B1	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Aflatoxin B1 results in decreased expression of TXNDC16 mRNA	CTD	PMID:19770486
TXNDC16	Human	aflatoxin B1	decreases expression	EXP		6480464	Aflatoxin B1 results in decreased expression of TXNDC16 mRNA	CTD	PMID:27153756
TXNDC16	Human	aflatoxin M1	decreases expression	EXP		6480464	Aflatoxin M1 results in decreased expression of TXNDC16 mRNA	CTD	PMID:30928695
TXNDC16	Human	all-trans-retinoic acid	decreases expression	EXP		6480464	Tretinoin results in decreased expression of TXNDC16 mRNA	CTD	PMID:33167477
TXNDC16	Human	amphetamine	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Amphetamine results in decreased expression of TXNDC16 mRNA	CTD	PMID:30779732
TXNDC16	Human	aristolochic acid A	decreases expression	EXP		6480464	aristolochic acid I results in decreased expression of TXNDC16 mRNA	CTD	PMID:33212167
TXNDC16	Human	azathioprine	decreases expression	EXP		6480464	Azathioprine results in decreased expression of TXNDC16 mRNA	CTD	PMID:22623647
TXNDC16	Human	benzo[a]pyrene	decreases expression	EXP		6480464	Benzo(a)pyrene results in decreased expression of TXNDC16 mRNA	CTD	PMID:20106945
TXNDC16	Human	benzo[a]pyrene	affects methylation	EXP		6480464	Benzo(a)pyrene affects the methylation of TXNDC16 5' UTR and Benzo(a)pyrene affects the methylation of TXNDC16 intron	CTD	PMID:27901495 and PMID:30157460
TXNDC16	Human	benzo[a]pyrene	decreases methylation	ISO	Txndc16 (Mus musculus)	6480464	Benzo(a)pyrene results in decreased methylation of TXNDC16 intron	CTD	PMID:27901495
TXNDC16	Human	benzo[a]pyrene	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Benzo(a)pyrene results in decreased expression of TXNDC16 mRNA	CTD	PMID:19770486
TXNDC16	Human	beta-lapachone	decreases expression	EXP		6480464	beta-lapachone results in decreased expression of TXNDC16 mRNA	CTD	PMID:38218311
TXNDC16	Human	bis(2-ethylhexyl) phthalate	decreases expression	EXP		6480464	Diethylhexyl Phthalate results in decreased expression of TXNDC16 mRNA	CTD	PMID:31163220
TXNDC16	Human	bisphenol A	multiple interactions	ISO	Txndc16 (Rattus norvegicus)	6480464	[bisphenol A co-treated with Estradiol] results in increased expression of TXNDC16 mRNA	CTD	PMID:26496021
TXNDC16	Human	bisphenol A	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of TXNDC16 mRNA	CTD	PMID:25181051 and PMID:32145629
TXNDC16	Human	butanal	decreases expression	EXP		6480464	butyraldehyde results in decreased expression of TXNDC16 mRNA	CTD	PMID:26079696
TXNDC16	Human	cadmium dichloride	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Cadmium Chloride results in decreased expression of TXNDC16 mRNA	CTD	PMID:33453195
TXNDC16	Human	carbamazepine	affects expression	EXP		6480464	Carbamazepine affects the expression of TXNDC16 mRNA	CTD	PMID:25979313
TXNDC16	Human	carbon nanotube	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
TXNDC16	Human	chlorpyrifos	affects expression	ISO	Txndc16 (Mus musculus)	6480464	Chlorpyrifos affects the expression of TXNDC16 mRNA	CTD	PMID:37019170
TXNDC16	Human	cisplatin	increases expression	EXP		6480464	Cisplatin results in increased expression of TXNDC16 mRNA	CTD	PMID:27594783
TXNDC16	Human	cyclosporin A	decreases expression	EXP		6480464	Cyclosporine results in decreased expression of TXNDC16 mRNA	CTD	PMID:20106945 and PMID:27989131
TXNDC16	Human	deoxynivalenol	increases phosphorylation	ISO	Txndc16 (Mus musculus)	6480464	deoxynivalenol results in increased phosphorylation of TXNDC16 protein	CTD	PMID:23352502
TXNDC16	Human	Dibutyl phosphate	affects expression	EXP		6480464	di-n-butylphosphoric acid affects the expression of TXNDC16 mRNA	CTD	PMID:37042841
TXNDC16	Human	dioxygen	multiple interactions	ISO	Txndc16 (Rattus norvegicus)	6480464	[Oxygen deficiency co-treated with Blood Glucose deficiency co-treated with Particulate Matter] results in decreased expression of TXNDC16 mRNA	CTD	PMID:33729688
TXNDC16	Human	dorsomorphin	multiple interactions	EXP		6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of TXNDC16 mRNA	CTD	PMID:27188386
TXNDC16	Human	epoxiconazole	increases expression	ISO	Txndc16 (Mus musculus)	6480464	epoxiconazole results in increased expression of TXNDC16 mRNA	CTD	PMID:35436446
TXNDC16	Human	ethanol	multiple interactions	ISO	Txndc16 (Mus musculus)	6480464	Ethanol affects the expression of and affects the splicing of TXNDC16 mRNA	CTD	PMID:30319688
TXNDC16	Human	folic acid	multiple interactions	ISO	Txndc16 (Mus musculus)	6480464	Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of TXNDC16 mRNA]	CTD	PMID:22206623
TXNDC16	Human	folic acid	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Folic Acid results in decreased expression of TXNDC16 mRNA	CTD	PMID:25629700
TXNDC16	Human	gentamycin	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Gentamicins results in increased expression of TXNDC16 mRNA	CTD	PMID:33387578
TXNDC16	Human	methoxychlor	affects methylation	ISO	Txndc16 (Rattus norvegicus)	6480464	Methoxychlor affects the methylation of TXNDC16 gene	CTD	PMID:35440735
TXNDC16	Human	methyl methanesulfonate	increases expression	EXP		6480464	Methyl Methanesulfonate results in increased expression of TXNDC16 mRNA	CTD	PMID:23649840
TXNDC16	Human	methylmercury chloride	increases expression	EXP		6480464	methylmercuric chloride results in increased expression of TXNDC16 mRNA	CTD	PMID:34089799
TXNDC16	Human	N-methyl-4-phenylpyridinium	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	1-Methyl-4-phenylpyridinium results in increased expression of TXNDC16 mRNA	CTD	PMID:28801915
TXNDC16	Human	nickel atom	decreases expression	EXP		6480464	Nickel results in decreased expression of TXNDC16 mRNA	CTD	PMID:24768652 and PMID:25583101
TXNDC16	Human	paracetamol	increases expression	EXP		6480464	Acetaminophen results in increased expression of TXNDC16 mRNA	CTD	PMID:21420995 and PMID:22230336
TXNDC16	Human	paracetamol	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Acetaminophen results in increased expression of TXNDC16 mRNA	CTD	PMID:33387578
TXNDC16	Human	paraquat	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Paraquat results in decreased expression of TXNDC16 mRNA	CTD	PMID:32680482
TXNDC16	Human	pentanal	decreases expression	EXP		6480464	pentanal results in decreased expression of TXNDC16 mRNA	CTD	PMID:26079696
TXNDC16	Human	perfluorononanoic acid	decreases expression	EXP		6480464	perfluoro-n-nonanoic acid results in decreased expression of TXNDC16 mRNA	CTD	PMID:32588087
TXNDC16	Human	phenylmercury acetate	decreases expression	EXP		6480464	Phenylmercuric Acetate results in decreased expression of TXNDC16 mRNA	CTD	PMID:26272509
TXNDC16	Human	phenylmercury acetate	multiple interactions	EXP		6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of TXNDC16 mRNA	CTD	PMID:27188386
TXNDC16	Human	pirinixic acid	multiple interactions	ISO	Txndc16 (Mus musculus)	6480464	[pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of TXNDC16 mRNA	CTD	PMID:19710929
TXNDC16	Human	pirinixic acid	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	pirinixic acid results in decreased expression of TXNDC16 mRNA	CTD	PMID:23811191
TXNDC16	Human	quercetin	decreases expression	EXP		6480464	Quercetin results in decreased expression of TXNDC16 mRNA	CTD	PMID:21632981
TXNDC16	Human	SB 431542	multiple interactions	EXP		6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of TXNDC16 mRNA	CTD	PMID:27188386
TXNDC16	Human	silicon dioxide	decreases expression	EXP		6480464	Silicon Dioxide analog results in decreased expression of TXNDC16 mRNA	CTD	PMID:25895662
TXNDC16	Human	Soman	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Soman results in decreased expression of TXNDC16 mRNA	CTD	PMID:19281266
TXNDC16	Human	sunitinib	decreases expression	EXP		6480464	Sunitinib results in decreased expression of TXNDC16 mRNA	CTD	PMID:31533062
TXNDC16	Human	tamoxifen	affects expression	ISO	Txndc16 (Mus musculus)	6480464	Tamoxifen affects the expression of TXNDC16 mRNA	CTD	PMID:17555576
TXNDC16	Human	testosterone	decreases expression	ISO	Txndc16 (Mus musculus)	6480464	Testosterone results in decreased expression of TXNDC16 mRNA	CTD	PMID:20600201 and PMID:21669218
TXNDC16	Human	tetrachloromethane	multiple interactions	ISO	Txndc16 (Rattus norvegicus)	6480464	schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of TXNDC16 mRNA]	CTD	PMID:31150632
TXNDC16	Human	tetrachloromethane	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Carbon Tetrachloride results in decreased expression of TXNDC16 mRNA	CTD	PMID:31150632
TXNDC16	Human	thioacetamide	decreases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Thioacetamide results in decreased expression of TXNDC16 mRNA	CTD	PMID:34492290
TXNDC16	Human	titanium dioxide	decreases methylation	ISO	Txndc16 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of TXNDC16 promoter alternative form	CTD	PMID:35295148
TXNDC16	Human	trichloroethene	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	Trichloroethylene results in increased expression of TXNDC16 mRNA	CTD	PMID:33387578
TXNDC16	Human	trichostatin A	affects expression	EXP		6480464	trichostatin A affects the expression of TXNDC16 mRNA	CTD	PMID:28542535
TXNDC16	Human	triphenyl phosphate	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	triphenyl phosphate results in increased expression of TXNDC16 mRNA	CTD	PMID:30589522
TXNDC16	Human	triptonide	increases expression	ISO	Txndc16 (Mus musculus)	6480464	triptonide results in increased expression of TXNDC16 mRNA	CTD	PMID:33045310
TXNDC16	Human	urethane	increases expression	EXP		6480464	Urethane results in increased expression of TXNDC16 mRNA	CTD	PMID:28818685
TXNDC16	Human	valproic acid	increases expression	EXP		6480464	Valproic Acid results in increased expression of TXNDC16 mRNA	CTD	PMID:19101580 and PMID:29154799
TXNDC16	Human	valproic acid	increases expression	ISO	Txndc16 (Mus musculus)	6480464	Valproic Acid results in increased expression of TXNDC16 mRNA	CTD	PMID:21427059
TXNDC16	Human	valproic acid	affects expression	EXP		6480464	Valproic Acid affects the expression of TXNDC16 mRNA	CTD	PMID:25979313
TXNDC16	Human	vinclozolin	increases expression	ISO	Txndc16 (Rattus norvegicus)	6480464	vinclozolin results in increased expression of TXNDC16 mRNA	CTD	PMID:23034163 and PMID:23869203

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TXNDC16	Human	endoplasmic reticulum	located_in	IEA	UniProtKB-KW:KW-0256	150520179		UniProt	GO_REF:0000043
TXNDC16	Human	endoplasmic reticulum lumen	located_in	IDA		150520179	PMID:21359175	UniProt	PMID:21359175
TXNDC16	Human	endoplasmic reticulum lumen	located_in	IEA	UniProtKB-SubCell:SL-0096	150520179		UniProt	GO_REF:0000044
TXNDC16	Human	extracellular exosome	located_in	HDA		150520179	PMID:19199708	UniProt	PMID:19199708
TXNDC16	Human	extracellular region	located_in	IEA	UniProtKB-KW:KW-0964	150520179		UniProt	GO_REF:0000043
TXNDC16	Human	extracellular region	located_in	IEA	UniProtKB-SubCell:SL-0243	150520179		UniProt	GO_REF:0000044
TXNDC16	Human	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TXNDC16	Human	protein binding	enables	IPI	UniProtKB:Q8IWF2	150520179	PMID:21359175	UniProt	PMID:21359175

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10718198	PMID:12477932	PMID:14702039	PMID:16344560	PMID:18029348	PMID:19199708	PMID:21359175	PMID:22119785	PMID:22419666	PMID:23535732	PMID:24556642	PMID:25122923
PMID:26186194	PMID:26496610	PMID:26638075	PMID:28380382	PMID:28514442	PMID:28675297	PMID:29669786	PMID:30021884	PMID:32838362	PMID:33961781	PMID:34079125	PMID:35007762
PMID:35013218	PMID:35384245	PMID:35696571

TXNDC16
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	52,430,596 - 52,552,505 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	52,429,472 - 52,552,547 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	52,897,314 - 53,019,223 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	51,967,059 - 52,088,963 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	14	32,764,912 - 32,886,888 (-)	NCBI		Celera
Cytogenetic Map	14	q22.1	NCBI
HuRef	14	33,057,647 - 33,180,093 (-)	NCBI		HuRef
CHM1_1	14	52,836,496 - 52,958,271 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	46,637,669 - 46,760,351 (-)	NCBI		T2T-CHM13v2.0

Txndc16
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	45,371,905 - 45,457,008 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	45,370,922 - 45,457,785 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	45,134,448 - 45,219,551 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	45,133,465 - 45,220,328 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	45,754,123 - 45,839,069 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	44,056,325 - 44,141,271 (-)	NCBI		MGSCv36	mm8
Celera	14	41,314,858 - 41,399,608 (-)	NCBI		Celera
Cytogenetic Map	14	C1	NCBI
cM Map	14	22.77	NCBI

Txndc16
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	20,831,541 - 20,905,661 (-)	NCBI		GRCr8
mRatBN7.2	15	18,351,688 - 18,425,833 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	18,351,694 - 18,425,722 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	15	19,472,522 - 19,547,384 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	19,473,373 - 19,541,815 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	23,438,029 - 23,512,690 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	21,024,241 - 21,098,469 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	21,025,091 - 21,098,469 (-)	NCBI
Celera	15	18,780,144 - 18,854,497 (-)	NCBI		Celera
Cytogenetic Map	15	p14	NCBI

Txndc16
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	10,593,576 - 10,681,465 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	10,593,693 - 10,680,381 (+)	NCBI	ChiLan1.0	ChiLan1.0

TXNDC16
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	53,561,951 - 53,684,366 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	52,760,890 - 52,900,786 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	33,027,634 - 33,149,460 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	51,312,237 - 51,433,913 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	51,299,416 - 51,425,730 (-)	Ensembl	panpan1.1		panPan2

TXNDC16
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	28,672,257 - 28,795,401 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	28,674,519 - 28,795,356 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	28,417,404 - 28,540,530 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	28,839,967 - 28,961,575 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	28,839,985 - 28,961,505 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	28,512,373 - 28,635,313 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	28,578,167 - 28,707,403 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	28,914,842 - 29,036,369 (-)	NCBI		UU_Cfam_GSD_1.0

Txndc16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	76,474,561 - 76,569,220 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936697	2,257,486 - 2,344,941 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936697	2,249,685 - 2,343,297 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TXNDC16
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	182,102,736 - 182,203,048 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	182,103,603 - 182,203,048 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TXNDC16
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	29,515,739 - 29,619,100 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	29,513,781 - 29,627,668 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	17,786,508 - 17,905,158 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Txndc16
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	16,531,651 - 16,629,343 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	16,531,707 - 16,630,293 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in TXNDC16
59 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 14q22.1-22.3(chr14:50591011-56286919)x1	copy number loss	See cases [RCV000051519]	Chr14:50591011..56286919 [GRCh38] Chr14:51057729..56753637 [GRCh37] Chr14:50127479..55823390 [NCBI36] Chr14:14q22.1-22.3	pathogenic
NM_001160047.1(TXNDC16):c.1689-66C>G	single nucleotide variant	Lung cancer [RCV000098924]	Chr14:52455528 [GRCh38] Chr14:52922246 [GRCh37] Chr14:14q22.1	uncertain significance
GRCh38/hg38 14q11.2-32.33(chr14:20151149-106855263)x3	copy number gain	See cases [RCV000135543]	Chr14:20151149..106855263 [GRCh38] Chr14:20619308..107263478 [GRCh37] Chr14:19689148..106334523 [NCBI36] Chr14:14q11.2-32.33	pathogenic
GRCh38/hg38 14q22.1-22.3(chr14:51544846-55320598)x1	copy number loss	See cases [RCV000135883]	Chr14:51544846..55320598 [GRCh38] Chr14:52011564..55787316 [GRCh37] Chr14:51081314..54857069 [NCBI36] Chr14:14q22.1-22.3	pathogenic
GRCh38/hg38 14q21.1-22.3(chr14:39196172-56714461)x3	copy number gain	See cases [RCV000140717]	Chr14:39196172..56714461 [GRCh38] Chr14:39665376..57181179 [GRCh37] Chr14:38735127..56250932 [NCBI36] Chr14:14q21.1-22.3	likely pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20043514-106877229)x3	copy number gain	See cases [RCV000143373]	Chr14:20043514..106877229 [GRCh38] Chr14:20511673..107285437 [GRCh37] Chr14:19581513..106356482 [NCBI36] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q11.2-22.2(chr14:23164384-54733411)x3	copy number gain	See cases [RCV000447658]	Chr14:23164384..54733411 [GRCh37] Chr14:14q11.2-22.2	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19794561-107234280)x3	copy number gain	See cases [RCV000446256]	Chr14:19794561..107234280 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:20511673-107285437)	copy number gain	See cases [RCV000512041]	Chr14:20511673..107285437 [GRCh37] Chr14:14q11.2-32.33	pathogenic
NM_020784.3(TXNDC16):c.1426C>G (p.Pro476Ala)	single nucleotide variant	not specified [RCV004304890]	Chr14:52470567 [GRCh38] Chr14:52937285 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2284A>G (p.Arg762Gly)	single nucleotide variant	not specified [RCV004289661]	Chr14:52432498 [GRCh38] Chr14:52899216 [GRCh37] Chr14:14q22.1	uncertain significance
GRCh37/hg19 14q11.1-32.33(chr14:19000422-107289053)x3	copy number gain	not provided [RCV000738412]	Chr14:19000422..107289053 [GRCh37] Chr14:14q11.1-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19280733-107287663)x3	copy number gain	not provided [RCV000738413]	Chr14:19280733..107287663 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19327823-107287663)x3	copy number gain	not provided [RCV000738414]	Chr14:19327823..107287663 [GRCh37] Chr14:14q11.2-32.33	pathogenic
GRCh37/hg19 14q22.1(chr14:52890163-53288450)x1	copy number loss	not provided [RCV000751015]	Chr14:52890163..53288450 [GRCh37] Chr14:14q22.1	benign
NM_020784.3(TXNDC16):c.1322C>T (p.Thr441Ile)	single nucleotide variant	not specified [RCV004290703]	Chr14:52470671 [GRCh38] Chr14:52937389 [GRCh37] Chr14:14q22.1	uncertain significance
GRCh37/hg19 14q13.3-32.33(chr14:37671058-106985955)x2	copy number gain	See cases [RCV002286356]	Chr14:37671058..106985955 [GRCh37] Chr14:14q13.3-32.33	pathogenic
NM_020784.3(TXNDC16):c.1658G>A (p.Gly553Glu)	single nucleotide variant	not specified [RCV004169200]	Chr14:52457135 [GRCh38] Chr14:52923853 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.645T>A (p.His215Gln)	single nucleotide variant	not specified [RCV004108346]	Chr14:52511351 [GRCh38] Chr14:52978069 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1645A>C (p.Asn549His)	single nucleotide variant	not specified [RCV004242131]	Chr14:52457148 [GRCh38] Chr14:52923866 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2231C>T (p.Pro744Leu)	single nucleotide variant	not specified [RCV004128603]	Chr14:52432551 [GRCh38] Chr14:52899269 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.263A>G (p.Glu88Gly)	single nucleotide variant	not specified [RCV004177526]	Chr14:52537653 [GRCh38] Chr14:53004371 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1136C>G (p.Thr379Ser)	single nucleotide variant	not specified [RCV004174274]	Chr14:52482938 [GRCh38] Chr14:52949656 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1280A>G (p.Gln427Arg)	single nucleotide variant	not specified [RCV004104910]	Chr14:52482262 [GRCh38] Chr14:52948980 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1525G>A (p.Ala509Thr)	single nucleotide variant	not specified [RCV004237955]	Chr14:52470130 [GRCh38] Chr14:52936848 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.553A>G (p.Thr185Ala)	single nucleotide variant	not specified [RCV004234976]	Chr14:52514932 [GRCh38] Chr14:52981650 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2354C>T (p.Ser785Leu)	single nucleotide variant	not specified [RCV004225128]	Chr14:52432428 [GRCh38] Chr14:52899146 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2074G>A (p.Val692Ile)	single nucleotide variant	not specified [RCV004211444]	Chr14:52439324 [GRCh38] Chr14:52906042 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2125C>A (p.Gln709Lys)	single nucleotide variant	not specified [RCV004243729]	Chr14:52439273 [GRCh38] Chr14:52905991 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.112A>G (p.Ser38Gly)	single nucleotide variant	not specified [RCV004137528]	Chr14:52543446 [GRCh38] Chr14:53010164 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1132G>A (p.Glu378Lys)	single nucleotide variant	not specified [RCV004084966]	Chr14:52482942 [GRCh38] Chr14:52949660 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1211C>T (p.Thr404Ile)	single nucleotide variant	not specified [RCV004234975]	Chr14:52482863 [GRCh38] Chr14:52949581 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.79T>C (p.Ser27Pro)	single nucleotide variant	not specified [RCV004241763]	Chr14:52543479 [GRCh38] Chr14:53010197 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1324A>G (p.Met442Val)	single nucleotide variant	not specified [RCV004163227]	Chr14:52470669 [GRCh38] Chr14:52937387 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1721C>T (p.Ala574Val)	single nucleotide variant	not specified [RCV004208854]	Chr14:52455445 [GRCh38] Chr14:52922163 [GRCh37] Chr14:14q22.1	likely benign
NM_020784.3(TXNDC16):c.721C>G (p.His241Asp)	single nucleotide variant	not specified [RCV004189256]	Chr14:52511275 [GRCh38] Chr14:52977993 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2099G>A (p.Gly700Asp)	single nucleotide variant	not specified [RCV004273251]	Chr14:52439299 [GRCh38] Chr14:52906017 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2199T>G (p.Ile733Met)	single nucleotide variant	not specified [RCV004261727]	Chr14:52432583 [GRCh38] Chr14:52899301 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.444G>C (p.Gln148His)	single nucleotide variant	not specified [RCV004277960]	Chr14:52519242 [GRCh38] Chr14:52985960 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2375T>C (p.Ile792Thr)	single nucleotide variant	not specified [RCV004343265]	Chr14:52432407 [GRCh38] Chr14:52899125 [GRCh37] Chr14:14q22.1	uncertain significance
GRCh37/hg19 14q11.2-23.1(chr14:20511673-61826023)x3	copy number gain	not provided [RCV003485022]	Chr14:20511673..61826023 [GRCh37] Chr14:14q11.2-23.1	pathogenic
GRCh37/hg19 14q22.1(chr14:53005584-53252148)x3	copy number gain	not provided [RCV003485033]	Chr14:53005584..53252148 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.633C>T (p.Leu211=)	single nucleotide variant	not provided [RCV003390398]	Chr14:52511363 [GRCh38] Chr14:52978081 [GRCh37] Chr14:14q22.1	likely benign
NM_020784.3(TXNDC16):c.1044A>C (p.Glu348Asp)	single nucleotide variant	not specified [RCV004484010]	Chr14:52488427 [GRCh38] Chr14:52955145 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1180G>C (p.Val394Leu)	single nucleotide variant	not specified [RCV004484011]	Chr14:52482894 [GRCh38] Chr14:52949612 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1227C>G (p.Asp409Glu)	single nucleotide variant	not specified [RCV004484012]	Chr14:52482847 [GRCh38] Chr14:52949565 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1366T>G (p.Cys456Gly)	single nucleotide variant	not specified [RCV004484013]	Chr14:52470627 [GRCh38] Chr14:52937345 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1568T>C (p.Leu523Ser)	single nucleotide variant	not specified [RCV004484014]	Chr14:52470087 [GRCh38] Chr14:52936805 [GRCh37] Chr14:14q22.1	likely benign
NM_020784.3(TXNDC16):c.1733C>T (p.Ala578Val)	single nucleotide variant	not specified [RCV004484015]	Chr14:52455433 [GRCh38] Chr14:52922151 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1790C>T (p.Thr597Ile)	single nucleotide variant	not specified [RCV004484016]	Chr14:52455376 [GRCh38] Chr14:52922094 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2174C>T (p.Ala725Val)	single nucleotide variant	not specified [RCV004484017]	Chr14:52439224 [GRCh38] Chr14:52905942 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2267C>T (p.Thr756Ile)	single nucleotide variant	not specified [RCV004484018]	Chr14:52432515 [GRCh38] Chr14:52899233 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.251G>A (p.Cys84Tyr)	single nucleotide variant	not specified [RCV004484019]	Chr14:52537665 [GRCh38] Chr14:53004383 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.352A>G (p.Thr118Ala)	single nucleotide variant	not specified [RCV004484020]	Chr14:52536759 [GRCh38] Chr14:53003477 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.538G>A (p.Ala180Thr)	single nucleotide variant	not specified [RCV004484021]	Chr14:52514947 [GRCh38] Chr14:52981665 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.779A>G (p.Gln260Arg)	single nucleotide variant	not specified [RCV004484022]	Chr14:52490983 [GRCh38] Chr14:52957701 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.88G>C (p.Glu30Gln)	single nucleotide variant	not specified [RCV004484024]	Chr14:52543470 [GRCh38] Chr14:53010188 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2411A>G (p.Asn804Ser)	single nucleotide variant	not specified [RCV004687891]	Chr14:52432371 [GRCh38] Chr14:52899089 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.2185A>T (p.Asn729Tyr)	single nucleotide variant	not specified [RCV004677616]	Chr14:52439213 [GRCh38] Chr14:52905931 [GRCh37] Chr14:14q22.1	uncertain significance
GRCh37/hg19 14q21.3-22.1(chr14:50503550-53302064)x1	copy number loss	not provided [RCV004819865]	Chr14:50503550..53302064 [GRCh37] Chr14:14q21.3-22.1	uncertain significance
NM_020784.3(TXNDC16):c.668C>T (p.Thr223Ile)	single nucleotide variant	not specified [RCV004881354]	Chr14:52511328 [GRCh38] Chr14:52978046 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1570T>C (p.Tyr524His)	single nucleotide variant	not specified [RCV004881355]	Chr14:52470085 [GRCh38] Chr14:52936803 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.10G>A (p.Gly4Ser)	single nucleotide variant	not specified [RCV004881357]	Chr14:52543548 [GRCh38] Chr14:53010266 [GRCh37] Chr14:14q22.1	likely benign
NM_020784.3(TXNDC16):c.2276G>A (p.Arg759His)	single nucleotide variant	not specified [RCV004881361]	Chr14:52432506 [GRCh38] Chr14:52899224 [GRCh37] Chr14:14q22.1	likely benign
NM_020784.3(TXNDC16):c.619G>C (p.Glu207Gln)	single nucleotide variant	not specified [RCV004881362]	Chr14:52511377 [GRCh38] Chr14:52978095 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1551A>T (p.Leu517Phe)	single nucleotide variant	not specified [RCV004881353]	Chr14:52470104 [GRCh38] Chr14:52936822 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.886C>T (p.Arg296Cys)	single nucleotide variant	not specified [RCV004881356]	Chr14:52490876 [GRCh38] Chr14:52957594 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1036C>T (p.His346Tyr)	single nucleotide variant	not specified [RCV004881358]	Chr14:52488435 [GRCh38] Chr14:52955153 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1186C>A (p.Leu396Ile)	single nucleotide variant	not specified [RCV004881359]	Chr14:52482888 [GRCh38] Chr14:52949606 [GRCh37] Chr14:14q22.1	uncertain significance
NM_020784.3(TXNDC16):c.1087G>A (p.Asp363Asn)	single nucleotide variant	not specified [RCV004881360]	Chr14:52488384 [GRCh38] Chr14:52955102 [GRCh37] Chr14:14q22.1	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	822
Count of miRNA genes:	608
Interacting mature miRNAs:	664
Transcripts:	ENST00000281741, ENST00000554399, ENST00000555312, ENST00000557374
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597330170	GWAS1426244_H	6-bromotryptophan measurement QTL GWAS1426244 (human)		3e-21	6-bromotryptophan measurement		14	52514946	52514947	Human
597188217	GWAS1284291_H	6-bromotryptophan measurement QTL GWAS1284291 (human)		2e-20	6-bromotryptophan measurement		14	52457102	52457103	Human
597188218	GWAS1284292_H	6-bromotryptophan measurement QTL GWAS1284292 (human)		8e-89	6-bromotryptophan measurement		14	52514946	52514947	Human
597307166	GWAS1403240_H	6-bromotryptophan measurement QTL GWAS1403240 (human)		2e-58	6-bromotryptophan measurement		14	52514946	52514947	Human
597068528	GWAS1164602_H	peripheral arterial disease, traffic air pollution measurement QTL GWAS1164602 (human)		0.000004	peripheral arterial disease, traffic air pollution measurement		14	52494930	52494931	Human
597329852	GWAS1425926_H	level of 5-bromotryptophan in blood QTL GWAS1425926 (human)		2e-17	level of 5-bromotryptophan in blood		14	52514946	52514947	Human
406916776	GWAS565752_H	obsolete Mendelian syndromes with cleft lip/palate QTL GWAS565752 (human)		0.0000008	obsolete Mendelian syndromes with cleft lip/palate		14	52522510	52522511	Human
597137884	GWAS1233958_H	6-bromotryptophan measurement QTL GWAS1233958 (human)		2e-51	6-bromotryptophan measurement		14	52470537	52470538	Human
597137882	GWAS1233956_H	6-bromotryptophan measurement QTL GWAS1233956 (human)		6e-58	6-bromotryptophan measurement		14	52514946	52514947	Human
597160504	GWAS1256578_H	lipid measurement QTL GWAS1256578 (human)		0.000002	lipid measurement	blood lipid measurement (CMO:0000050)	14	52492760	52492761	Human
597262443	GWAS1358517_H	amino acid measurement QTL GWAS1358517 (human)		0.000002	amino acid measurement		14	52470537	52470538	Human
597086018	GWAS1182092_H	serum metabolite measurement QTL GWAS1182092 (human)		5e-13	serum metabolite measurement		14	52514946	52514947	Human
597331180	GWAS1427254_H	Tinnitus QTL GWAS1427254 (human)		3e-09	Tinnitus		14	52506598	52506599	Human
597331692	GWAS1427766_H	Tinnitus QTL GWAS1427766 (human)		7e-09	Tinnitus		14	52506598	52506599	Human
597279809	GWAS1375883_H	6-bromotryptophan measurement QTL GWAS1375883 (human)		7e-100	6-bromotryptophan measurement		14	52514946	52514947	Human
597334240	GWAS1430314_H	rheumatoid arthritis QTL GWAS1430314 (human)		0.000001	rheumatoid arthritis		14	52465166	52465167	Human
597334241	GWAS1430315_H	rheumatoid arthritis QTL GWAS1430315 (human)		0.000002	rheumatoid arthritis		14	52455178	52455179	Human
596963562	GWAS1083081_H	orofacial cleft QTL GWAS1083081 (human)		0.0000008	orofacial cleft		14	52522510	52522511	Human

G35830

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	53,016,222 - 53,016,323	UniSTS	GRCh37
Build 36	14	52,085,972 - 52,086,073	RGD	NCBI36
Celera	14	32,883,809 - 32,883,910	RGD
Cytogenetic Map	14	q22.1	UniSTS
HuRef	14	33,177,019 - 33,177,120	UniSTS

SHGC-143165

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	52,952,669 - 52,953,002	UniSTS	GRCh37
Build 36	14	52,022,419 - 52,022,752	RGD	NCBI36
Celera	14	32,820,256 - 32,820,589	RGD
Cytogenetic Map	14	q22.1	UniSTS
HuRef	14	33,113,006 - 33,113,339	UniSTS
TNG Radiation Hybrid Map	14	14825.0	UniSTS

SHGC-149440

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	52,988,429 - 52,988,731	UniSTS	GRCh37
Build 36	14	52,058,179 - 52,058,481	RGD	NCBI36
Celera	14	32,856,016 - 32,856,318	RGD
Cytogenetic Map	14	q22.1	UniSTS
HuRef	14	33,148,782 - 33,149,084	UniSTS
TNG Radiation Hybrid Map	14	14814.0	UniSTS

RH78442

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	14	52,897,484 - 52,897,602	UniSTS	GRCh37
Build 36	14	51,967,234 - 51,967,352	RGD	NCBI36
Celera	14	32,765,088 - 32,765,206	RGD
Cytogenetic Map	14	q22.1	UniSTS
HuRef	14	33,057,823 - 33,057,941	UniSTS
GeneMap99-GB4 RH Map	14	122.63	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2788	2253	4974	1726	2351	6	624	1951	465	2270	7306	6472	53	3734	1	852	1744	1617	175	1


RefSeq Transcripts	NM_001160047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_020784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017021505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054376461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001750462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001750463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001750464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001750465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001750466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_007064037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_007064038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_008488886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_008488887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB037765	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK022563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK097748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL157971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC137081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC137082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC142650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC144469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC150205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC152428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DA231411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB083799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000281741 ⟹ ENSP00000281741

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	52,430,596 - 52,552,505 (-)	Ensembl

Ensembl Acc Id:

ENST00000554399

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	52,439,259 - 52,552,522 (-)	Ensembl

Ensembl Acc Id:

ENST00000555312 ⟹ ENSP00000451619

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	52,430,645 - 52,552,505 (-)	Ensembl

Ensembl Acc Id:

ENST00000557374 ⟹ ENSP00000450839

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	52,488,363 - 52,552,505 (-)	Ensembl

Ensembl Acc Id:

ENST00000850587 ⟹ ENSP00000520874

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	52,429,472 - 52,552,547 (-)	Ensembl

Ensembl Acc Id:

ENST00000850588 ⟹ ENSP00000520875

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	14	52,430,655 - 52,552,505 (-)	Ensembl

RefSeq Acc Id:

NM_001160047 ⟹ NP_001153519

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,430,596 - 52,552,505 (-)	NCBI
GRCh37	14	52,897,308 - 53,019,301 (-)	RGD
Celera	14	32,764,912 - 32,886,888 (-)	RGD
HuRef	14	33,057,647 - 33,180,093 (-)	RGD
CHM1_1	14	52,836,496 - 52,958,271 (-)	NCBI
T2T-CHM13v2.0	14	46,637,669 - 46,760,351 (-)	NCBI

Sequence:

show sequence

GAGTCGGTGGCGGCTGCAGGCTGGGAGGGAGAAGTGCTACGCCTTTGCAGGTTGGCGAAGTGGTTCCAGGCTACCCGGCTAGTCTGGCACGGCCCCGTCTTCTGCCTCCTCCTCCGTCGCGTGGCGGC
GGGAACTGTTGGCCGCGCGGCCTCGGGAACGGCCCAGGTCCCCGCCCGCAGGTCCCGGGCAGATAACATAGATCATCAGTAGAAAACTTCTTGAAGTTGTTCAAGAAAAATTTGAAAGTAGCAAAATA
GAAAATAAAGAATTAACAGCAGATACAGAGGACAGCATGGAAGTGTTGTCTTAGGAAACAGAACACAGCAGTGAAAAAACAGACAAAATCCGCTCAGATACAACTGCAGCTGATAATGTTTTCCGGCT
TCAATGTCTTTAGAGTTGGGATCTCTTTTGTCATAATGTGCATTTTTTACATGCCAACAGTAAACTCTTTACCAGAACTGAGTCCTCAGAAATATTTTAGTACATTGCAACCAGGAAAAGCCTCTTTA
GCTTATTTTTGTCAAGCTGATTCCCCAAGAACATCTGTATTTCTTGAAGAACTGAATGAGGCTGTTAGACCTCTGCAGGACTATGGAATTTCAGTTGCCAAGGTTAATTGTGTCAAAGAAGAAATATC
AAGATACTGTGGAAAAGAAAAGGATTTGATGAAAGCATATTTATTCAAGGGCAACATATTGCTCAGAGAATTCCCTACTGACACCTTGTTTGATGTGAATGCCATTGTCGCCCATGTTCTCTTTGAAG
TGAAATATATTACCAACCTGGAAGACCTTCAGAACATAGAAAATGCTCTGAAAGGAAAAGCAAATATTATATTCTCATATGTAAGAGCCATTGGAATACCAGAGCACAGAGCAGTCATGGAAGCCGCT
TTTGTGTATGGGACTACATACCAATTTGTCTTAACCACAGAAATTGCCCTTTTGGAAAGTATTGGCTCTGAGGATGTGGAATATGCACATCTCTACTTTTTTCATTGTAAACTAGTCTTGGACTTGAC
CCAGCAATGTAGAAGAACACTAATGGAACAGCCATTGACTACACTGAACATTCACCTGTTTATTAAGACAATGAAAGCACCTCTGTTGACTGAAGTTGCTGAAGATCCTCAACAAGTTTCAACTGTCC
ATCTCCAACTGGGCTTACCACTGGTTTTTATTGTTAGCCAACAGGCTACTTATGAAGCTGATAGAAGAACTGCAGAATGGGTTGCTTGGCGTCTTCTGGGAAAAGCAGGAGTTCTACTCTTGTTAAGG
GACTCTTTGGAAGTGAACATTCCTCAAGATGCTAATGTGGTCTTCAAAAGAGCAGAAGAGGGAGTTCCAGTGGAATTTTTGGTATTACATGATGTTGATTTAATAATATCTCATGTGGAAAATAATAT
GCACATTGAGGAAATACAAGAAGATGAAGACAATGACATGGAAGGTCCAGATATAGATGTTCAGGATGATGAAGTGGCAGAAACTGTTTTCAGAGATAGGAAGAGAAAATTACCTTTGGAACTTACAG
TGGAACTAACAGAAGAAACATTTAATGCAACAGTGATGGCTTCTGACAGCATAGTACTCTTCTATGCTGGTTGGCAAGCAGTATCCATGGCATTTTTGCAATCCTATATTGATGTGGCAGTTAAACTG
AAAGGCACATCTACTATGCTTCTTACTAGAATAAACTGTGCAGATTGGTCTGATGTATGTACTAAGCAAAATGTTACTGAATTTCCTATCATAAAGATGTACAAGAAAGGCGAGAACCCAGTATCTTA
TGCTGGAATGTTAGGAACCGAAGATCTCCTAAAATTTATCCAGCTCAACAGGATTTCATATCCAGTGAATATAACATCGATCCAAGAAGCAGAAGAATATTTAAGTGGGGAATTATATAAAGACCTCA
TCTTGTATTCTAGTGTGTCAGTATTGGGACTATTTAGTCCAACCATGAAAACAGCAAAAGAAGATTTTAGTGAAGCAGGAAACTACCTAAAAGGATATGTTATCACTGGAATTTATTCTGAAGAAGAT
GTTTTGCTACTGTCAACCAAATATGCTGCAAGTCTTCCAGCCCTGCTGCTTGCCAGACACACAGAAGGCAAAATAGAGAGCATCCCACTAGCTAGCACACATGCACAAGACATAGTTCAAATAATAAC
AGATGCACTACTGGAAATGTTTCCGGAAATCACTGTGGAAAATCTTCCCAGTTATTTCAGACTTCAGAAACCATTATTGATTTTGTTCAGTGATGGCACTGTAAATCCTCAGTATAAAAAAGCAATAT
TGACACTGGTAAAGCAGAAATACTTGGATTCATTTACTCCATGCTGGTTAAATCTAAAGAATACTCCAGTGGGGAGAGGAATCTTGAGGGCATATTTTGATCCTCTGCCTCCCCTTCCTCTTCTTGTT
TTGGTGAATCTGCATTCAGGTGGCCAAGTATTTGCATTTCCTTCAGACCAGGCTATAATTGAAGAAAACCTTGTATTGTGGCTGAAGAAATTAGAAGCAGGACTAGAAAATCATATCACAATTTTACC
TGCTCAAGAATGGAAACCTCCTCTTCCAGCTTATGATTTTCTAAGTATGATAGATGCCGCAACATCTCAACGTGGCACTAGGAAAGTTCCCAAGTGTATGAAAGAAACAGATGTGCAGGAGAATGATA
AGGAACAACATGAAGATAAATCGGCAGTCAGAAAAGAACCGATTGAAACTCTGAGAATAAAGCATTGGAATAGAAGTAATTGGTTTAAAGAAGCAGAAAAATCATTTAGACGTGATAAAGAGTTAGGA
TGCTCAAAAGTGAACTAATTTTATAGGGCTGTGGTTTCCAAAATTTTTTTGGCATGATAGACTTAATTTATTTCCTTAAAGAATAATATTAAATCATTTCAAGTTTGCAGACTAGTGCCATCCAATAG
AATTATAATATAAGTCACATATTTTATTTAAAATTTTCTAGTAACTACATTAAACAAAGTAAAAGTGAGCAGGGCAAAATAATTTTGATATTACTTTTCACCCAGTAGTATACCCAAAATAGCGAAAT
ATAGAAATTATTAATGAGATATTTTACATCCTTTTTTGTACCAAGTCTTCTAAATGCAGTACATATTTTATACTTACTGCATTTCTTACTTCCGAGTAGCCATATTTCAAGTGTTCCTTGCCACATGT
GGCCTGTGACTACTGTATTGGACAGTTCAGTACTAGACAAAAACTAGCATAATTAACTTAGTTCTAGCCATGATTTCTATTTGGATTAAAATTAAACTCTAATCACAGTTAACTCCACAGTGCATTCA
TGCAGCTGACAGTTATATTTGTTTTATTGGAGTCATGATATTAAAATCAGCGTTTGTCAACCTCAGGGGATATTTAGCAATTGTCGGGAGACATTTTTGATGTCATGACTAGGGCAGTTATTGACATT
TAGTGAGTAGAGGCCAGGGATCCTGCTAAATAACCTGCATTGGACAGCGCCCCACAACAAAGAATTATCCTGCCCGAAATGGTAGTCGTGCCAAGGCTGAGTAACCTTGTGTTAAAAGTAACCTGTGG
CAGACTAGGTTTCCAGAATTTCCTGGTTCTGCTCACGTATCATGTTTGAAAAAATTTTGGCTATTAAAGATATGTATTAGATGGTCTTATCCTGATTATTACCTGGATACAACTTGATCTTTTCTAAT
ATTTTCAGAAAGTGATGGGATAACCCTAGAAGAGGACTCAGAATGATATTTATATTTTAAGTGAGTCTTAAAACCTCCTCTTATTTCTACAAGTTATATGGCTAAATTTCAGATTGAACAGGGATTCA
GCATTCTGCCATCTCCTCATGGAAAGAGAGGCTCCCTCATCTGAAGCGTCTCTGAAATCTACCCTTGCAAGCTTCAGACAAATCAGTTGATCTCCCTGAGCCACACGGCCTCATTCTGTGAGGGAGGG
AAAGATTAGCCAAAGAGTTAATTTTCATTCCAAATCACTTAGCTGTTAGACTGATCTGTTTGTAGCAGTTGTTTGTCTCATTTTTGCTCTGTGCATTTTTTGAGACATTTGTTGAGAATATTCTATTT
GGTGCTCTACTGTATTTTTCTTTTTAATATCTACTTGATATCTTGTTCTTTAAATTTTCTTCACATATGGTTTGCCTGATACAACTGATTTTTATAACTGAAATTTAAGGAATCTAACAGCTAAAACT
CAGTAAGTGCATATATTTCCTTATAACATAGACCCGTTGCTACTCTCAGCACCCTCTCCTCAATTTTTTTTCCTGTAGCATGTGATGCCTGATTAAACTCATTTTCATTTGCTTTTATTTCTAATATG
GGAACAATGAGAGTGAACTCTAAATATAGGTTGTAGTAATAAAACATCATTAGCCTAATTATTAGAAAATGCTAATTAAGTACCAGCACATAGAAACATGAAATTGCTTAGTCATTGTACCTTTGTCA
GCAATTTTGACAGTCATTAATGTTTGTCATAATTTTAAATAAAGTGTCTGGGTTTCAGAATA

hide sequence

RefSeq Acc Id:

NM_020784 ⟹ NP_065835

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,430,596 - 52,552,505 (-)	NCBI
GRCh37	14	52,897,308 - 53,019,301 (-)	RGD
Build 36	14	51,967,059 - 52,088,963 (-)	NCBI Archive
Celera	14	32,764,912 - 32,886,888 (-)	RGD
HuRef	14	33,057,647 - 33,180,093 (-)	RGD
CHM1_1	14	52,836,496 - 52,958,271 (-)	NCBI
T2T-CHM13v2.0	14	46,637,669 - 46,760,351 (-)	NCBI

Sequence:

show sequence

GAGTCGGTGGCGGCTGCAGGCTGGGAGGGAGAAGTGCTACGCCTTTGCAGGTTGGCGAAGTGGT
TCCAGGCTACCCGGCTAGTCTGGCACGGCCCCGTCTTCTGCCTCCTCCTCCGTCGCGTGGCGGCGGGAACTGTTGGCCGCGCGGCCTCGGGAACGGCCCAGGTCCCCGCCCGCAGGTCCCGGGCAGAT
AACATAGATCATCAGTAGAAAACTTCTTGAAGTTGTTCAAGAAAAATTTGAAAGTAGCAAAATAGAAAATAAAGAATTAACAGCAGATACAGAGGACAGCATGGAAGTGTTGTCTTAGGAAACAGAAC
ACAGCAGTGAAAAAACAGACAAAATCCGCTCAGATACAACTGCAGCTGATAATGTTTTCCGGCTTCAATGTCTTTAGAGTTGGGATCTCTTTTGTCATAATGTGCATTTTTTACATGCCAACAGTAAA
CTCTTTACCAGAACTGAGTCCTCAGAAATATTTTAGTACATTGCAACCAGGAAAAGCCTCTTTAGCTTATTTTTGTCAAGCTGATTCCCCAAGAACATCTGTATTTCTTGAAGAACTGAATGAGGCTG
TTAGACCTCTGCAGGACTATGGAATTTCAGTTGCCAAGGTTAATTGTGTCAAAGAAGAAATATCAAGATACTGTGGAAAAGAAAAGGATTTGATGAAAGCATATTTATTCAAGGGCAACATATTGCTC
AGAGAATTCCCTACTGACACCTTGTTTGATGTGAATGCCATTGTCGCCCATGTTCTCTTTGCTCTTCTTTTTAGTGAAGTGAAATATATTACCAACCTGGAAGACCTTCAGAACATAGAAAATGCTCT
GAAAGGAAAAGCAAATATTATATTCTCATATGTAAGAGCCATTGGAATACCAGAGCACAGAGCAGTCATGGAAGCCGCTTTTGTGTATGGGACTACATACCAATTTGTCTTAACCACAGAAATTGCCC
TTTTGGAAAGTATTGGCTCTGAGGATGTGGAATATGCACATCTCTACTTTTTTCATTGTAAACTAGTCTTGGACTTGACCCAGCAATGTAGAAGAACACTAATGGAACAGCCATTGACTACACTGAAC
ATTCACCTGTTTATTAAGACAATGAAAGCACCTCTGTTGACTGAAGTTGCTGAAGATCCTCAACAAGTTTCAACTGTCCATCTCCAACTGGGCTTACCACTGGTTTTTATTGTTAGCCAACAGGCTAC
TTATGAAGCTGATAGAAGAACTGCAGAATGGGTTGCTTGGCGTCTTCTGGGAAAAGCAGGAGTTCTACTCTTGTTAAGGGACTCTTTGGAAGTGAACATTCCTCAAGATGCTAATGTGGTCTTCAAAA
GAGCAGAAGAGGGAGTTCCAGTGGAATTTTTGGTATTACATGATGTTGATTTAATAATATCTCATGTGGAAAATAATATGCACATTGAGGAAATACAAGAAGATGAAGACAATGACATGGAAGGTCCA
GATATAGATGTTCAGGATGATGAAGTGGCAGAAACTGTTTTCAGAGATAGGAAGAGAAAATTACCTTTGGAACTTACAGTGGAACTAACAGAAGAAACATTTAATGCAACAGTGATGGCTTCTGACAG
CATAGTACTCTTCTATGCTGGTTGGCAAGCAGTATCCATGGCATTTTTGCAATCCTATATTGATGTGGCAGTTAAACTGAAAGGCACATCTACTATGCTTCTTACTAGAATAAACTGTGCAGATTGGT
CTGATGTATGTACTAAGCAAAATGTTACTGAATTTCCTATCATAAAGATGTACAAGAAAGGCGAGAACCCAGTATCTTATGCTGGAATGTTAGGAACCGAAGATCTCCTAAAATTTATCCAGCTCAAC
AGGATTTCATATCCAGTGAATATAACATCGATCCAAGAAGCAGAAGAATATTTAAGTGGGGAATTATATAAAGACCTCATCTTGTATTCTAGTGTGTCAGTATTGGGACTATTTAGTCCAACCATGAA
AACAGCAAAAGAAGATTTTAGTGAAGCAGGAAACTACCTAAAAGGATATGTTATCACTGGAATTTATTCTGAAGAAGATGTTTTGCTACTGTCAACCAAATATGCTGCAAGTCTTCCAGCCCTGCTGC
TTGCCAGACACACAGAAGGCAAAATAGAGAGCATCCCACTAGCTAGCACACATGCACAAGACATAGTTCAAATAATAACAGATGCACTACTGGAAATGTTTCCGGAAATCACTGTGGAAAATCTTCCC
AGTTATTTCAGACTTCAGAAACCATTATTGATTTTGTTCAGTGATGGCACTGTAAATCCTCAGTATAAAAAAGCAATATTGACACTGGTAAAGCAGAAATACTTGGATTCATTTACTCCATGCTGGTT
AAATCTAAAGAATACTCCAGTGGGGAGAGGAATCTTGAGGGCATATTTTGATCCTCTGCCTCCCCTTCCTCTTCTTGTTTTGGTGAATCTGCATTCAGGTGGCCAAGTATTTGCATTTCCTTCAGACC
AGGCTATAATTGAAGAAAACCTTGTATTGTGGCTGAAGAAATTAGAAGCAGGACTAGAAAATCATATCACAATTTTACCTGCTCAAGAATGGAAACCTCCTCTTCCAGCTTATGATTTTCTAAGTATG
ATAGATGCCGCAACATCTCAACGTGGCACTAGGAAAGTTCCCAAGTGTATGAAAGAAACAGATGTGCAGGAGAATGATAAGGAACAACATGAAGATAAATCGGCAGTCAGAAAAGAACCGATTGAAAC
TCTGAGAATAAAGCATTGGAATAGAAGTAATTGGTTTAAAGAAGCAGAAAAATCATTTAGACGTGATAAAGAGTTAGGATGCTCAAAAGTGAACTAATTTTATAGGGCTGTGGTTTCCAAAATTTTTT
TGGCATGATAGACTTAATTTATTTCCTTAAAGAATAATATTAAATCATTTCAAGTTTGCAGACTAGTGCCATCCAATAGAATTATAATATAAGTCACATATTTTATTTAAAATTTTCTAGTAACTACA
TTAAACAAAGTAAAAGTGAGCAGGGCAAAATAATTTTGATATTACTTTTCACCCAGTAGTATACCCAAAATAGCGAAATATAGAAATTATTAATGAGATATTTTACATCCTTTTTTGTACCAAGTCTT
CTAAATGCAGTACATATTTTATACTTACTGCATTTCTTACTTCCGAGTAGCCATATTTCAAGTGTTCCTTGCCACATGTGGCCTGTGACTACTGTATTGGACAGTTCAGTACTAGACAAAAACTAGCA
TAATTAACTTAGTTCTAGCCATGATTTCTATTTGGATTAAAATTAAACTCTAATCACAGTTAACTCCACAGTGCATTCATGCAGCTGACAGTTATATTTGTTTTATTGGAGTCATGATATTAAAATCA
GCGTTTGTCAACCTCAGGGGATATTTAGCAATTGTCGGGAGACATTTTTGATGTCATGACTAGGGCAGTTATTGACATTTAGTGAGTAGAGGCCAGGGATCCTGCTAAATAACCTGCATTGGACAGCG
CCCCACAACAAAGAATTATCCTGCCCGAAATGGTAGTCGTGCCAAGGCTGAGTAACCTTGTGTTAAAAGTAACCTGTGGCAGACTAGGTTTCCAGAATTTCCTGGTTCTGCTCACGTATCATGTTTGA
AAAAATTTTGGCTATTAAAGATATGTATTAGATGGTCTTATCCTGATTATTACCTGGATACAACTTGATCTTTTCTAATATTTTCAGAAAGTGATGGGATAACCCTAGAAGAGGACTCAGAATGATAT
TTATATTTTAAGTGAGTCTTAAAACCTCCTCTTATTTCTACAAGTTATATGGCTAAATTTCAGATTGAACAGGGATTCAGCATTCTGCCATCTCCTCATGGAAAGAGAGGCTCCCTCATCTGAAGCGT
CTCTGAAATCTACCCTTGCAAGCTTCAGACAAATCAGTTGATCTCCCTGAGCCACACGGCCTCATTCTGTGAGGGAGGGAAAGATTAGCCAAAGAGTTAATTTTCATTCCAAATCACTTAGCTGTTAG
ACTGATCTGTTTGTAGCAGTTGTTTGTCTCATTTTTGCTCTGTGCATTTTTTGAGACATTTGTTGAGAATATTCTATTTGGTGCTCTACTGTATTTTTCTTTTTAATATCTACTTGATATCTTGTTCT
TTAAATTTTCTTCACATATGGTTTGCCTGATACAACTGATTTTTATAACTGAAATTTAAGGAATCTAACAGCTAAAACTCAGTAAGTGCATATATTTCCTTATAACATAGACCCGTTGCTACTCTCAG
CACCCTCTCCTCAATTTTTTTTCCTGTAGCATGTGATGCCTGATTAAACTCATTTTCATTTGCTTTTATTTCTAATATGGGAACAATGAGAGTGAACTCTAAATATAGGTTGTAGTAATAAAACATCA
TTAGCCTAATTATTAGAAAATGCTAATTAAGTACCAGCACATAGAAACATGAAATTGCTTAGTCATTGTACCTTTGTCAGCAATTTTGACAGTCATTAATGTTTGTCATAATTTTAAATAAAGTGTCT
GGGTTTCAGAATA

hide sequence

RefSeq Acc Id:

XM_017021505 ⟹ XP_016876994

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,470,593 - 52,552,505 (-)	NCBI

Sequence:

show sequence

AGCACGAGGAGAAGGAGGAGCTTCGCAGGTTGTTTTTTCCCAGGAGGCCGACTCCGCCGAGTCG
GTGGCGGCTGCAGGCTGGGAGGGAGAAGTGCTACGCCTTTGCAGGTTGGCGAAGTGGTTCCAGGCTACCCGGCTAGTCTGGCACGGCCCCGTCTTCTGCCTCCTCCTCCGTCGCGTGGCGGCGGGAAC
TGTTGGCCGCGCGGCCTCGGGAACGGCCCAGGTCCCCGCCCGCAGGTCCCGGGCAGATAACATAGATCATCAGTAGAAAACTTCTTGAAGTTGTTCAAGAAAAATTTGAAAGTAGCAAAATAGAAAAT
AAAGAATTAACAGCAGATACAGAGGACAGCATGGAAGTGTTGTCTTAGGAAACAGAACACAGCAGTGAAAAAACAGACAAAATCCGCTCAGATACAACTGCAGCTGATAATGTTTTCCGGCTTCAATG
TCTTTAGAGTTGGGATCTCTTTTGTCATAATGTGCATTTTTTACATGCCAACAGTAAACTCTTTACCAGAACTGAGTCCTCAGAAATATTTTAGTACATTGCAACCAGGAAAAGCCTCTTTAGCTTAT
TTTTGTCAAGCTGATTCCCCAAGAACATCTGTATTTCTTGAAGAACTGAATGAGGCTGTTAGACCTCTGCAGGACTATGGAATTTCAGTTGCCAAGGTTAATTGTGTCAAAGAAGAAATATCAAGATA
CTGTGGAAAAGAAAAGGATTTGATGAAAGCATATTTATTCAAGGGCAACATATTGCTCAGAGAATTCCCTACTGACACCTTGTTTGATGTGAATGCCATTGTCGCCCATGTTCTCTTTGCTCTTCTTT
TTAGTGAAGTGAAATATATTACCAACCTGGAAGACCTTCAGAACATAGAAAATGCTCTGAAAGGAAAAGCAAATATTATATTCTCATATGTAAGAGCCATTGGAATACCAGAGCACAGAGCAGTCATG
GAAGCCGCTTTTGTGTATGGGACTACATACCAATTTGTCTTAACCACAGAAATTGCCCTTTTGGAAAGTATTGGCTCTGAGGATGTGGAATATGCACATCTCTACTTTTTTCATTGTAAACTAGTCTT
GGACTTGACCCAGCAATGTAGAAGAACACTAATGGAACAGCCATTGACTACACTGAACATTCACCTGTTTATTAAGACAATGAAAGCACCTCTGTTGACTGAAGTTGCTGAAGATCCTCAACAAGTTT
CAACTGTCCATCTCCAACTGGGCTTACCACTGGTTTTTATTGTTAGCCAACAGGCTACTTATGAAGCTGATAGAAGAACTGCAGAATGGGTTGCTTGGCGTCTTCTGGGAAAAGCAGGAGTTCTACTC
TTGTTAAGGGACTCTTTGGAAGTGAACATTCCTCAAGATGCTAATGTGGTCTTCAAAAGAGCAGAAGAGGGAGTTCCAGTGGAATTTTTGGTATTACATGATGTTGATTTAATAATATCTCATGTGGA
AAATAATATGCACATTGAGGAAATACAAGAAGATGAAGACAATGACATGGAAGGTCCAGATATAGATGTTCAGGATGATGAAGTGGCAGAAACTGTTTTCAGAGATAGGAAGAGAAAATTACCTTTGG
AACTTACAGTGGAACTAACAGAAGAAACATTTAATGCAACAGTGATGGCTTCTGACAGCATAGTACTCTTCTATGCTGGTTGGCAAGCAGTATCCATGGCATTTTTGCAATCCTATATTGATGTGGCA
GTTAAACTGAAAGTTGTCTGGGGCCATCTTGTCTGCTCCTTACAGCACACATGGCTGGCAGAGAAGGGAAGACAGAGCGGCCATCTTGGAAACGTCTAGTCCTTAGTTCCTGCCGGCACATCTACTAT
GCTTCTTACTAGAATAAACTGTGCAGATTGGTCTGATGTATGTACTAAGCAAAATGTTACTGAATTTCCTATCAT

hide sequence

RefSeq Acc Id:

XM_054376461 ⟹ XP_054232436

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	14	46,677,658 - 46,760,351 (-)	NCBI

RefSeq Acc Id:

XR_007064037

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,457,088 - 52,552,505 (-)	NCBI

RefSeq Acc Id:

XR_007064038

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,457,088 - 52,552,505 (-)	NCBI

RefSeq Acc Id:

XR_008488886

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	14	46,664,150 - 46,760,351 (-)	NCBI

RefSeq Acc Id:

XR_008488887

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	14	46,664,150 - 46,760,351 (-)	NCBI


Protein RefSeqs	NP_001153519	(Get FASTA)	NCBI Sequence Viewer
	NP_065835	(Get FASTA)	NCBI Sequence Viewer
	XP_016876994	(Get FASTA)	NCBI Sequence Viewer
	XP_054232436	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI37082	(Get FASTA)	NCBI Sequence Viewer
	AAI37083	(Get FASTA)	NCBI Sequence Viewer
	AAI42651	(Get FASTA)	NCBI Sequence Viewer
	AAI44470	(Get FASTA)	NCBI Sequence Viewer
	AAI50206	(Get FASTA)	NCBI Sequence Viewer
	AAI52429	(Get FASTA)	NCBI Sequence Viewer
	BAA92582	(Get FASTA)	NCBI Sequence Viewer
	BAB14101	(Get FASTA)	NCBI Sequence Viewer
	EAW65650	(Get FASTA)	NCBI Sequence Viewer
	EAW65651	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000281741
	ENSP00000281741.4
	ENSP00000520875
GenBank Protein	Q9P2K2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_065835 ⟸ NM_020784
- Peptide Label:	isoform 1 precursor
- UniProtKB:	B9EH67 (UniProtKB/Swiss-Prot), A7MD07 (UniProtKB/Swiss-Prot), A7E260 (UniProtKB/Swiss-Prot), A5PKW9 (UniProtKB/Swiss-Prot), Q9H9W7 (UniProtKB/Swiss-Prot), Q9P2K2 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MFSGFNVFRVGISFVIMCIFYMPTVNSLPELSPQKYFSTLQPGKASLAYFCQADSPRTSVFLEELNEAVRPLQDYGISVAKVNCVKEEISRYCGKEKDLMKAYLFKGNILLREFPTDTLFDVNAIVAH VLFALLFSEVKYITNLEDLQNIENALKGKANIIFSYVRAIGIPEHRAVMEAAFVYGTTYQFVLTTEIALLESIGSEDVEYAHLYFFHCKLVLDLTQQCRRTLMEQPLTTLNIHLFIKTMKAPLLTEVA EDPQQVSTVHLQLGLPLVFIVSQQATYEADRRTAEWVAWRLLGKAGVLLLLRDSLEVNIPQDANVVFKRAEEGVPVEFLVLHDVDLIISHVENNMHIEEIQEDEDNDMEGPDIDVQDDEVAETVFRDR KRKLPLELTVELTEETFNATVMASDSIVLFYAGWQAVSMAFLQSYIDVAVKLKGTSTMLLTRINCADWSDVCTKQNVTEFPIIKMYKKGENPVSYAGMLGTEDLLKFIQLNRISYPVNITSIQEAEEY LSGELYKDLILYSSVSVLGLFSPTMKTAKEDFSEAGNYLKGYVITGIYSEEDVLLLSTKYAASLPALLLARHTEGKIESIPLASTHAQDIVQIITDALLEMFPEITVENLPSYFRLQKPLLILFSDGT VNPQYKKAILTLVKQKYLDSFTPCWLNLKNTPVGRGILRAYFDPLPPLPLLVLVNLHSGGQVFAFPSDQAIIEENLVLWLKKLEAGLENHITILPAQEWKPPLPAYDFLSMIDAATSQRGTRKVPKCM KETDVQENDKEQHEDKSAVRKEPIETLRIKHWNRSNWFKEAEKSFRRDKELGCSKVN hide sequence

RefSeq Acc Id:	NP_001153519 ⟸ NM_001160047
- Peptide Label:	isoform 2 precursor
- UniProtKB:	B7ZME4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFSGFNVFRVGISFVIMCIFYMPTVNSLPELSPQKYFSTLQPGKASLAYFCQADSPRTSVFLEE LNEAVRPLQDYGISVAKVNCVKEEISRYCGKEKDLMKAYLFKGNILLREFPTDTLFDVNAIVAHVLFEVKYITNLEDLQNIENALKGKANIIFSYVRAIGIPEHRAVMEAAFVYGTTYQFVLTTEIAL LESIGSEDVEYAHLYFFHCKLVLDLTQQCRRTLMEQPLTTLNIHLFIKTMKAPLLTEVAEDPQQVSTVHLQLGLPLVFIVSQQATYEADRRTAEWVAWRLLGKAGVLLLLRDSLEVNIPQDANVVFKR AEEGVPVEFLVLHDVDLIISHVENNMHIEEIQEDEDNDMEGPDIDVQDDEVAETVFRDRKRKLPLELTVELTEETFNATVMASDSIVLFYAGWQAVSMAFLQSYIDVAVKLKGTSTMLLTRINCADWS DVCTKQNVTEFPIIKMYKKGENPVSYAGMLGTEDLLKFIQLNRISYPVNITSIQEAEEYLSGELYKDLILYSSVSVLGLFSPTMKTAKEDFSEAGNYLKGYVITGIYSEEDVLLLSTKYAASLPALLL ARHTEGKIESIPLASTHAQDIVQIITDALLEMFPEITVENLPSYFRLQKPLLILFSDGTVNPQYKKAILTLVKQKYLDSFTPCWLNLKNTPVGRGILRAYFDPLPPLPLLVLVNLHSGGQVFAFPSDQ AIIEENLVLWLKKLEAGLENHITILPAQEWKPPLPAYDFLSMIDAATSQRGTRKVPKCMKETDVQENDKEQHEDKSAVRKEPIETLRIKHWNRSNWFKEAEKSFRRDKELGCSKVN hide sequence

RefSeq Acc Id:

XP_016876994 ⟸ XM_017021505

- Peptide Label:

isoform X1

- Sequence:

show sequence

MFSGFNVFRVGISFVIMCIFYMPTVNSLPELSPQKYFSTLQPGKASLAYFCQADSPRTSVFLEELNEAVRPLQDYGISVAKVNCVKEEISRYCGKEKDLMKAYLFKGNILLREFPTDTLFDVNAIVAH
VLFALLFSEVKYITNLEDLQNIENALKGKANIIFSYVRAIGIPEHRAVMEAAFVYGTTYQFVLTTEIALLESIGSEDVEYAHLYFFHCKLVLDLTQQCRRTLMEQPLTTLNIHLFIKTMKAPLLTEVA
EDPQQVSTVHLQLGLPLVFIVSQQATYEADRRTAEWVAWRLLGKAGVLLLLRDSLEVNIPQDANVVFKRAEEGVPVEFLVLHDVDLIISHVENNMHIEEIQEDEDNDMEGPDIDVQDDEVAETVFRDR
KRKLPLELTVELTEETFNATVMASDSIVLFYAGWQAVSMAFLQSYIDVAVKLKVVWGHLVCSLQHTWLAEKGRQSGHLGNV

hide sequence

Ensembl Acc Id:

ENSP00000451619 ⟸ ENST00000555312

Ensembl Acc Id:

ENSP00000450839 ⟸ ENST00000557374

Protein Domains

Thioredoxin

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9P2K2-F1-model_v2	AlphaFold	Q9P2K2	1-825	view protein structure

RGD ID:

6791975

Promoter ID:

HG_KWN:19382

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_001160047, NM_020784, UC010AOE.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	14	52,088,866 - 52,089,457 (-)	MPROMDB

RGD ID:

7227617

Promoter ID:

EPDNEW_H19553

Type:

initiation region

Name:

TXNDC16_1

Description:

thioredoxin domain containing 16

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H19554

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,552,503 - 52,552,563	EPDNEW

RGD ID:

7227615

Promoter ID:

EPDNEW_H19554

Type:

initiation region

Name:

TXNDC16_2

Description:

thioredoxin domain containing 16

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H19553

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	14	52,552,624 - 52,552,684	EPDNEW

Database	Acc Id	Source(s)
COSMIC	TXNDC16	COSMIC
Ensembl Genes	ENSG00000087301	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000281741	ENTREZGENE
	ENST00000281741.9	UniProtKB/Swiss-Prot
	ENST00000850588	ENTREZGENE
Gene3D-CATH	Glutaredoxin	UniProtKB/Swiss-Prot
GTEx	ENSG00000087301	GTEx
HGNC ID	HGNC:19965	ENTREZGENE
Human Proteome Map	TXNDC16	Human Proteome Map
InterPro	Thioredoxin-like_sf	UniProtKB/Swiss-Prot
	Thioredoxin_domain	UniProtKB/Swiss-Prot
	TXNDC16	UniProtKB/Swiss-Prot
KEGG Report	hsa:57544	UniProtKB/Swiss-Prot
NCBI Gene	57544	ENTREZGENE
OMIM	616179	OMIM
PANTHER	PTHR22699	UniProtKB/Swiss-Prot
	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16	UniProtKB/Swiss-Prot
Pfam	Thioredoxin	UniProtKB/Swiss-Prot
	Thioredoxin_6	UniProtKB/Swiss-Prot
PharmGKB	PA162407488	PharmGKB
Superfamily-SCOP	SSF52833	UniProtKB/Swiss-Prot
UniProt	A5PKW9	ENTREZGENE
	A7E260	ENTREZGENE
	A7MD07	ENTREZGENE
	B7ZME4	ENTREZGENE, UniProtKB/TrEMBL
	B9EH67	ENTREZGENE
	G3V2S5_HUMAN	UniProtKB/TrEMBL
	H0YJI6_HUMAN	UniProtKB/TrEMBL
	Q9H9W7	ENTREZGENE
	Q9P2K2	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A5PKW9	UniProtKB/Swiss-Prot
	A7E260	UniProtKB/Swiss-Prot
	A7MD07	UniProtKB/Swiss-Prot
	B9EH67	UniProtKB/Swiss-Prot
	Q9H9W7	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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