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Gene: PSMD11 (proteasome 26S subunit, non-ATPase 11) Homo sapiens

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Symbol:

PSMD11

Name:

proteasome 26S subunit, non-ATPase 11

RGD ID:

1315074

HGNC Page

HGNC:9556

Description:

Predicted to enable structural molecule activity. Involved in proteasome assembly; stem cell differentiation; and ubiquitin-dependent protein catabolic process. Located in membrane and nucleus. Part of proteasome accessory complex.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

26S proteasome non-ATPase regulatory subunit 11; 26S proteasome regulatory subunit 9; 26S proteasome regulatory subunit p44.5; 26S proteasome regulatory subunit RPN6; 26S proteasome regulatory subunit S9; MGC3844; p44.5; proteasome (prosome, macropain) 26S subunit, non-ATPase, 11; Rpn6; S9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	32,444,510 - 32,483,319 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	32,444,379 - 32,483,319 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	30,771,528 - 30,810,337 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	27,795,615 - 27,832,155 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	27,795,614 - 27,832,154	NCBI
Celera	17	27,681,703 - 27,718,244 (+)	NCBI		Celera
Cytogenetic Map	17	q11.2	NCBI
HuRef	17	26,958,102 - 26,996,871 (+)	NCBI		HuRef
CHM1_1	17	30,833,949 - 30,872,799 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	33,390,282 - 33,429,086 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD11	Human	Acute Liver Failure		EXP		11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:35172013

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD11	Human	(+)-schisandrin B	multiple interactions	ISO	Psmd11 (Rattus norvegicus)	6480464	schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of PSMD11 mRNA]	CTD	PMID:31150632
PSMD11	Human	(1->4)-beta-D-glucan	multiple interactions	ISO	Psmd11 (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of PSMD11 mRNA	CTD	PMID:36331819
PSMD11	Human	(Z)-3-butylidenephthalide	decreases expression	EXP		6480464	butylidenephthalide results in decreased expression of PSMD11 protein	CTD	PMID:23770345
PSMD11	Human	1,2-dimethylhydrazine	multiple interactions	ISO	Psmd11 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of PSMD11 mRNA	CTD	PMID:22206623
PSMD11	Human	1-chloro-2,4-dinitrobenzene	affects binding	EXP		6480464	Dinitrochlorobenzene binds to PSMD11 protein	CTD	PMID:32991956
PSMD11	Human	17beta-estradiol	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Estradiol results in increased expression of PSMD11 mRNA	CTD	PMID:39298647
PSMD11	Human	1H-pyrazole	increases expression	ISO	Psmd11 (Mus musculus)	6480464	pyrazole results in increased expression of PSMD11 mRNA	CTD	PMID:17945193
PSMD11	Human	2,2',4,4'-Tetrabromodiphenyl ether	multiple interactions	ISO	Psmd11 (Mus musculus)	6480464	troxerutin inhibits the reaction [2 more ...	CTD	PMID:25639565
PSMD11	Human	2,2',4,4'-Tetrabromodiphenyl ether	increases expression	ISO	Psmd11 (Mus musculus)	6480464	2 more ...	CTD	PMID:25639565
PSMD11	Human	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Psmd11 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of PSMD11 mRNA	CTD	PMID:21570461
PSMD11	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of PSMD11 mRNA	CTD	PMID:34747641
PSMD11	Human	2,4-dibromophenyl 2,4,5-tribromophenyl ether	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	2 more ...	CTD	PMID:19954255
PSMD11	Human	2-butoxyethanol	increases expression	ISO	Psmd11 (Mus musculus)	6480464	n-butoxyethanol results in increased expression of PSMD11 mRNA	CTD	PMID:19812364
PSMD11	Human	4,4'-sulfonyldiphenol	increases expression	ISO	Psmd11 (Mus musculus)	6480464	bisphenol S results in increased expression of PSMD11 mRNA	CTD	PMID:39298647
PSMD11	Human	4,4'-sulfonyldiphenol	increases expression	EXP		6480464	bisphenol S results in increased expression of PSMD11 protein	CTD	PMID:34186270
PSMD11	Human	acrolein	multiple interactions	EXP		6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of PSMD11 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of PSMD11 mRNA	CTD	PMID:32699268
PSMD11	Human	acrylamide	increases expression	EXP		6480464	Acrylamide results in increased expression of PSMD11 mRNA	CTD	PMID:32763439
PSMD11	Human	all-trans-retinoic acid	decreases expression	EXP		6480464	Tretinoin results in decreased expression of PSMD11 mRNA	CTD	PMID:16054129 and PMID:33167477
PSMD11	Human	alpha-pinene	multiple interactions	EXP		6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of PSMD11 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in decreased expression of PSMD11 mRNA	CTD	PMID:32699268
PSMD11	Human	amiodarone	increases expression	EXP		6480464	Amiodarone results in increased expression of PSMD11 mRNA	CTD	PMID:19774075
PSMD11	Human	arsane	multiple interactions	EXP		6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PSMD11 mRNA more ...	CTD	PMID:35809665 and PMID:39836092
PSMD11	Human	arsenic atom	multiple interactions	EXP		6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PSMD11 mRNA more ...	CTD	PMID:35809665 and PMID:39836092
PSMD11	Human	arsenic trichloride	multiple interactions	EXP		6480464	[arsenic trichloride results in increased abundance of Arsenic] which results in decreased expression of PSMD11 mRNA	CTD	PMID:35809665
PSMD11	Human	arsenite(3-)	multiple interactions	EXP		6480464	arsenite promotes the reaction [G3BP1 protein binds to PSMD11 protein]	CTD	PMID:32406909
PSMD11	Human	arsenous acid	increases expression	EXP		6480464	Arsenic Trioxide results in increased expression of PSMD11 mRNA	CTD	PMID:15894607 more ...
PSMD11	Human	atrazine	increases expression	EXP		6480464	Atrazine results in increased expression of PSMD11 mRNA	CTD	PMID:22378314
PSMD11	Human	benzene	increases expression	EXP		6480464	Benzene results in increased expression of PSMD11 mRNA	CTD	PMID:19162166
PSMD11	Human	benzo[a]pyrene	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of PSMD11 mRNA	CTD	PMID:22228805
PSMD11	Human	benzo[a]pyrene	increases methylation	EXP		6480464	Benzo(a)pyrene results in increased methylation of PSMD11 promoter	CTD	PMID:27901495
PSMD11	Human	benzo[a]pyrene diol epoxide I	decreases expression	EXP		6480464	7 more ...	CTD	PMID:19150397
PSMD11	Human	bisphenol A	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	bisphenol A results in increased expression of PSMD11 mRNA	CTD	PMID:25181051 more ...
PSMD11	Human	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of PSMD11 protein	CTD	PMID:34186270
PSMD11	Human	bisphenol A	decreases expression	ISO	Psmd11 (Mus musculus)	6480464	bisphenol A results in decreased expression of PSMD11 mRNA	CTD	PMID:33221593
PSMD11	Human	bisphenol AF	increases expression	EXP		6480464	bisphenol AF results in increased expression of PSMD11 protein	CTD	PMID:34186270
PSMD11	Human	Bisphenol B	increases expression	EXP		6480464	bisphenol B results in increased expression of PSMD11 protein	CTD	PMID:34186270
PSMD11	Human	bisphenol F	increases expression	ISO	Psmd11 (Mus musculus)	6480464	bisphenol F results in increased expression of PSMD11 mRNA	CTD	PMID:38685157
PSMD11	Human	Brodifacoum	decreases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	bromfenacoum results in decreased expression of PSMD11 protein	CTD	PMID:28903499
PSMD11	Human	carbon nanotube	affects expression	ISO	Psmd11 (Mus musculus)	6480464	Nanotubes and Carbon affects the expression of PSMD11 protein	CTD	PMID:21135415
PSMD11	Human	carbon nanotube	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
PSMD11	Human	cobalt dichloride	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	cobaltous chloride results in increased expression of PSMD11 mRNA	CTD	PMID:24386269
PSMD11	Human	copper(II) chloride	increases expression	EXP		6480464	cupric chloride results in increased expression of PSMD11 mRNA	CTD	PMID:17211630
PSMD11	Human	copper(II) sulfate	increases expression	EXP		6480464	Copper Sulfate results in increased expression of PSMD11 mRNA	CTD	PMID:19549813
PSMD11	Human	cyclosporin A	increases expression	EXP		6480464	Cyclosporine results in increased expression of PSMD11 mRNA	CTD	PMID:20106945 more ...
PSMD11	Human	diarsenic trioxide	increases expression	EXP		6480464	Arsenic Trioxide results in increased expression of PSMD11 mRNA	CTD	PMID:15894607 more ...
PSMD11	Human	dibutyl phthalate	decreases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Dibutyl Phthalate results in decreased expression of PSMD11 mRNA	CTD	PMID:21266533
PSMD11	Human	dimethylarsinous acid	decreases expression	EXP		6480464	dimethylarsinous acid results in decreased expression of PSMD11 mRNA	CTD	PMID:23487506
PSMD11	Human	diquat	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Diquat results in increased expression of PSMD11 mRNA	CTD	PMID:36851058
PSMD11	Human	dorsomorphin	multiple interactions	EXP		6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
PSMD11	Human	ethanol	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Ethanol results in increased expression of PSMD11 protein	CTD	PMID:23702218
PSMD11	Human	ethanol	multiple interactions	ISO	Psmd11 (Mus musculus)	6480464	Ethanol affects the expression of and affects the splicing of PSMD11 mRNA	CTD	PMID:30319688
PSMD11	Human	ethyl methanesulfonate	decreases expression	EXP		6480464	Ethyl Methanesulfonate results in decreased expression of PSMD11 mRNA	CTD	PMID:23649840
PSMD11	Human	flutamide	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Flutamide results in increased expression of PSMD11 mRNA	CTD	PMID:24136188
PSMD11	Human	folic acid	multiple interactions	ISO	Psmd11 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of PSMD11 mRNA	CTD	PMID:22206623
PSMD11	Human	formaldehyde	decreases expression	EXP		6480464	Formaldehyde results in decreased expression of PSMD11 mRNA	CTD	PMID:23649840
PSMD11	Human	gentamycin	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Gentamicins results in increased expression of PSMD11 mRNA	CTD	PMID:22061828
PSMD11	Human	glafenine	decreases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Glafenine results in decreased expression of PSMD11 mRNA	CTD	PMID:24136188
PSMD11	Human	glyphosate	decreases expression	ISO	Psmd11 (Mus musculus)	6480464	Glyphosate results in decreased expression of PSMD11 protein	CTD	PMID:37208198
PSMD11	Human	hypochlorous acid	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Hypochlorous Acid results in increased expression of PSMD11 mRNA	CTD	PMID:19376150
PSMD11	Human	isoprenaline	multiple interactions	ISO	Psmd11 (Rattus norvegicus)	6480464	[Isoproterenol co-treated with POSTN protein] results in decreased expression of PSMD11 mRNA	CTD	PMID:30303030
PSMD11	Human	ivermectin	decreases expression	EXP		6480464	Ivermectin results in decreased expression of PSMD11 protein	CTD	PMID:32959892
PSMD11	Human	manganese atom	multiple interactions	EXP		6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PSMD11 mRNA	CTD	PMID:39836092
PSMD11	Human	manganese(0)	multiple interactions	EXP		6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PSMD11 mRNA	CTD	PMID:39836092
PSMD11	Human	manganese(II) chloride	multiple interactions	EXP		6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PSMD11 mRNA	CTD	PMID:39836092
PSMD11	Human	mechlorethamine	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Mechlorethamine results in increased expression of PSMD11 mRNA	CTD	PMID:17107856
PSMD11	Human	Mesaconitine	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	mesaconitine results in increased expression of PSMD11 protein	CTD	PMID:37182599
PSMD11	Human	methapyrilene	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Methapyrilene results in increased expression of PSMD11 mRNA	CTD	PMID:16393664
PSMD11	Human	methylmercury chloride	increases expression	EXP		6480464	methylmercuric chloride results in increased expression of PSMD11 mRNA	CTD	PMID:28001369
PSMD11	Human	N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal	increases expression	EXP		6480464	benzyloxycarbonylleucyl-leucyl-leucine aldehyde results in increased expression of PSMD11 mRNA	CTD	PMID:31806706
PSMD11	Human	nefazodone	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	nefazodone results in increased expression of PSMD11 mRNA	CTD	PMID:24136188
PSMD11	Human	nickel subsulfide	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	nickel subsulfide results in increased expression of PSMD11 mRNA	CTD	PMID:21086188
PSMD11	Human	ochratoxin A	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	ochratoxin A results in increased expression of PSMD11 mRNA	CTD	PMID:22124623
PSMD11	Human	omega-6 fatty acid	increases expression	EXP		6480464	Fatty Acids and Omega-6 results in increased expression of PSMD11 mRNA	CTD	PMID:16823509
PSMD11	Human	ozone	multiple interactions	EXP		6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of PSMD11 mRNA more ...	CTD	PMID:32699268 and PMID:35430440
PSMD11	Human	p-chloromercuribenzoic acid	increases expression	EXP		6480464	p-Chloromercuribenzoic Acid results in increased expression of PSMD11 mRNA	CTD	PMID:26272509
PSMD11	Human	p-chloromercuribenzoic acid	multiple interactions	EXP		6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of PSMD11 mRNA	CTD	PMID:27188386
PSMD11	Human	paracetamol	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Acetaminophen results in increased expression of PSMD11 mRNA	CTD	PMID:17585979
PSMD11	Human	paracetamol	affects expression	ISO	Psmd11 (Mus musculus)	6480464	Acetaminophen affects the expression of PSMD11 mRNA	CTD	PMID:17562736
PSMD11	Human	paraquat	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Paraquat results in increased expression of PSMD11 mRNA	CTD	PMID:32680482
PSMD11	Human	pentachlorophenol	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Pentachlorophenol results in increased expression of PSMD11 mRNA	CTD	PMID:23892564
PSMD11	Human	perfluorooctane-1-sulfonic acid	affects expression	ISO	Psmd11 (Mus musculus)	6480464	perfluorooctane sulfonic acid affects the expression of PSMD11 mRNA	CTD	PMID:19429403
PSMD11	Human	perfluorooctane-1-sulfonic acid	multiple interactions	ISO	Psmd11 (Mus musculus)	6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of PSMD11 mRNA	CTD	PMID:36331819
PSMD11	Human	perfluorooctane-1-sulfonic acid	increases expression	ISO	Psmd11 (Mus musculus)	6480464	perfluorooctane sulfonic acid results in increased expression of PSMD11 mRNA	CTD	PMID:20936131
PSMD11	Human	perfluorooctanoic acid	affects expression	ISO	Psmd11 (Mus musculus)	6480464	perfluorooctanoic acid affects the expression of PSMD11 mRNA	CTD	PMID:19429403
PSMD11	Human	phenobarbital	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Phenobarbital results in increased expression of PSMD11 mRNA	CTD	PMID:19162173
PSMD11	Human	pirinixic acid	increases expression	ISO	Psmd11 (Mus musculus)	6480464	pirinixic acid results in increased expression of PSMD11 mRNA	CTD	PMID:18301758 and PMID:23811191
PSMD11	Human	propiconazole	increases expression	ISO	Psmd11 (Mus musculus)	6480464	propiconazole results in increased expression of PSMD11 mRNA	CTD	PMID:19363144
PSMD11	Human	quercetin	decreases phosphorylation	EXP		6480464	Quercetin results in decreased phosphorylation of PSMD11 protein	CTD	PMID:35688186
PSMD11	Human	SB 431542	multiple interactions	EXP		6480464	[NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
PSMD11	Human	silicon dioxide	increases expression	EXP		6480464	Silicon Dioxide results in increased expression of PSMD11 mRNA	CTD	PMID:25351596
PSMD11	Human	sirolimus	decreases expression	EXP		6480464	Sirolimus results in decreased expression of PSMD11 mRNA and Sirolimus results in decreased expression of PSMD11 protein	CTD	PMID:15782132
PSMD11	Human	sodium arsenite	increases expression	EXP		6480464	sodium arsenite results in increased expression of PSMD11 mRNA	CTD	PMID:34032870
PSMD11	Human	sodium arsenite	multiple interactions	EXP		6480464	[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in increased expression of PSMD11 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of PSMD11 mRNA	CTD	PMID:39836092
PSMD11	Human	tert-butyl hydroperoxide	decreases expression	EXP		6480464	tert-Butylhydroperoxide results in decreased expression of PSMD11 mRNA	CTD	PMID:15336504
PSMD11	Human	tetrachloromethane	multiple interactions	ISO	Psmd11 (Rattus norvegicus)	6480464	schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of PSMD11 mRNA]	CTD	PMID:31150632
PSMD11	Human	tetrachloromethane	increases expression	ISO	Psmd11 (Mus musculus)	6480464	Carbon Tetrachloride results in increased expression of PSMD11 mRNA	CTD	PMID:31919559
PSMD11	Human	tetrachloromethane	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	Carbon Tetrachloride results in increased expression of PSMD11 mRNA	CTD	PMID:31150632
PSMD11	Human	titanium dioxide	decreases methylation	ISO	Psmd11 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of PSMD11 gene and titanium dioxide results in decreased methylation of PSMD11 promoter	CTD	PMID:35295148
PSMD11	Human	triadimefon	increases expression	ISO	Psmd11 (Mus musculus)	6480464	triadimefon results in increased expression of PSMD11 mRNA	CTD	PMID:19363144
PSMD11	Human	trichloroethene	increases methylation	ISO	Psmd11 (Rattus norvegicus)	6480464	Trichloroethylene results in increased methylation of PSMD11 gene	CTD	PMID:27618143
PSMD11	Human	triptonide	increases expression	ISO	Psmd11 (Mus musculus)	6480464	triptonide results in increased expression of PSMD11 mRNA	CTD	PMID:33045310
PSMD11	Human	tunicamycin	decreases expression	EXP		6480464	Tunicamycin results in decreased expression of PSMD11 mRNA	CTD	PMID:29453283
PSMD11	Human	valdecoxib	increases expression	ISO	Psmd11 (Rattus norvegicus)	6480464	valdecoxib results in increased expression of PSMD11 mRNA	CTD	PMID:24136188
PSMD11	Human	valproic acid	increases expression	EXP		6480464	Valproic Acid results in increased expression of PSMD11 mRNA	CTD	PMID:23179753 and PMID:29154799
PSMD11	Human	valproic acid	affects expression	EXP		6480464	Valproic Acid affects the expression of PSMD11 mRNA	CTD	PMID:25979313
PSMD11	Human	valproic acid	decreases expression	EXP		6480464	Valproic Acid results in decreased expression of PSMD11 mRNA	CTD	PMID:24935251 and PMID:26272509
PSMD11	Human	valproic acid	multiple interactions	EXP		6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of PSMD11 mRNA	CTD	PMID:27188386
PSMD11	Human	valproic acid	affects splicing	ISO	Psmd11 (Rattus norvegicus)	6480464	Valproic Acid affects the splicing of PSMD11 mRNA	CTD	PMID:29427782

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD11	Human	proteasome assembly	involved_in	IMP		150520179	PMID:22972301	UniProt	PMID:22972301
PSMD11	Human	proteasome-mediated ubiquitin-dependent protein catabolic process	involved_in	NAS		150520179	PMID:19489727	ComplexPortal	PMID:19489727
PSMD11	Human	stem cell differentiation	involved_in	IMP		150520179	PMID:22972301	UniProt	PMID:22972301
PSMD11	Human	ubiquitin-dependent protein catabolic process	involved_in	IMP		150520179	PMID:22972301	UniProt	PMID:22972301
PSMD11	Human	ubiquitin-dependent protein catabolic process	involved_in	IBA	PANTHER:PTN000073599 more ...	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD11	Human	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
PSMD11	Human	cytosol	located_in	IEA	UniProtKB-SubCell:SL-0091	150520179		UniProt	GO_REF:0000044
PSMD11	Human	cytosol	located_in	TAS		150520179		Reactome	Reactome:R-HSA-1168640 more ...
PSMD11	Human	extracellular region	located_in	TAS		150520179		Reactome	Reactome:R-HSA-6798748 and Reactome:R-HSA-6800434
PSMD11	Human	ficolin-1-rich granule lumen	located_in	TAS		150520179		Reactome	Reactome:R-HSA-6800434
PSMD11	Human	membrane	located_in	HDA		150520179	PMID:19946888	UniProt	PMID:19946888
PSMD11	Human	nucleoplasm	located_in	TAS		150520179		Reactome	Reactome:R-HSA-174058 more ...
PSMD11	Human	nucleus	located_in	HDA		150520179	PMID:21630459	UniProt	PMID:21630459
PSMD11	Human	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
PSMD11	Human	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
PSMD11	Human	proteasome accessory complex	part_of	IEA	UniProtKB:Q8BG32 and ensembl:ENSMUSP00000017572	150520179		Ensembl	GO_REF:0000107
PSMD11	Human	proteasome accessory complex	part_of	IDA		150520179	PMID:22972301	UniProt	PMID:22972301
PSMD11	Human	proteasome complex	part_of	NAS		150520179	PMID:29636472	ComplexPortal	PMID:29636472
PSMD11	Human	proteasome complex	part_of	IEA	UniProtKB-KW:KW-0647	150520179		UniProt	GO_REF:0000043
PSMD11	Human	proteasome complex	part_of	TAS		150520179	PMID:9119060	PINC	PMID:9119060
PSMD11	Human	proteasome complex	part_of	IDA		150520179	PMID:17323924	UniProt	PMID:17323924
PSMD11	Human	proteasome regulatory particle	part_of	IEA	UniProtKB:Q8BG32 and ensembl:ENSMUSP00000017572	150520179		Ensembl	GO_REF:0000107
PSMD11	Human	proteasome regulatory particle, lid subcomplex	part_of	IBA	PANTHER:PTN000073599 more ...	150520179		GO_Central	GO_REF:0000033
PSMD11	Human	protein-containing complex	part_of	IEA	ARBA:ARBA00028902	150520179		UniProt	GO_REF:0000117
PSMD11	Human	secretory granule lumen	located_in	TAS		150520179		Reactome	Reactome:R-HSA-6798748

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD11	Human	protein binding	enables	IPI	UniProtKB:P55036	150520179	PMID:16990800 more ...	IntAct	PMID:16990800 more ...
PSMD11	Human	protein binding	enables	IPI	UniProtKB:Q96LA8	150520179	PMID:23455924	IntAct	PMID:23455924
PSMD11	Human	protein binding	enables	IPI	UniProtKB:O43741 and UniProtKB:P61201	150520179	PMID:32296183	IntAct	PMID:32296183
PSMD11	Human	structural molecule activity	enables	IBA	PANTHER:PTN000073599 and SGD:S000002255	150520179		GO_Central	GO_REF:0000033

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD11	Human	ubiquitin/proteasome degradation pathway		IEA		6907045		KEGG	hsa:03050

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:1317798	PMID:8125298	PMID:8811196	PMID:9079628	PMID:9119060	PMID:9426256	PMID:9811770	PMID:9846577	PMID:10893419	PMID:11285280	PMID:12167863	PMID:12185077
PMID:12419264	PMID:12426099	PMID:12477932	PMID:12665801	PMID:12719574	PMID:12750511	PMID:12791267	PMID:12808465	PMID:12808466	PMID:12809610	PMID:12830140	PMID:12840737
PMID:12859895	PMID:12914693	PMID:12920286	PMID:12970355	PMID:14527406	PMID:14528300	PMID:14528301	PMID:14550573	PMID:14557625	PMID:14564014	PMID:14614829	PMID:14702039
PMID:15029244	PMID:15231748	PMID:15342556	PMID:15489334	PMID:15610744	PMID:16169070	PMID:16196087	PMID:16239144	PMID:16990800	PMID:17081983	PMID:17110338	PMID:17323924
PMID:17353931	PMID:17573772	PMID:18775730	PMID:18922472	PMID:19013454	PMID:19193609	PMID:19380743	PMID:19489727	PMID:19490896	PMID:19553310	PMID:19596235	PMID:19615732
PMID:19616115	PMID:19738201	PMID:19815544	PMID:19946888	PMID:20467437	PMID:20473970	PMID:21081666	PMID:21319273	PMID:21630459	PMID:21832049	PMID:21873635	PMID:21901101
PMID:21983832	PMID:22190034	PMID:22645313	PMID:22863883	PMID:22939629	PMID:22952844	PMID:22972301	PMID:23022198	PMID:23376485	PMID:23438482	PMID:23455924	PMID:23503661
PMID:23751493	PMID:24121268	PMID:24337577	PMID:24515614	PMID:24711643	PMID:25147182	PMID:25253489	PMID:25476789	PMID:25756610	PMID:25921289	PMID:26170170	PMID:26186194
PMID:26344197	PMID:26485645	PMID:26496610	PMID:26549023	PMID:26618866	PMID:26669444	PMID:26748699	PMID:26760575	PMID:26831064	PMID:26885983	PMID:26972000	PMID:27114451
PMID:27342858	PMID:27375898	PMID:27428775	PMID:27591049	PMID:27609421	PMID:27684187	PMID:27705803	PMID:27880917	PMID:28027390	PMID:28137758	PMID:28190767	PMID:28292943
PMID:28330616	PMID:28396413	PMID:28443643	PMID:28514442	PMID:28524877	PMID:28539385	PMID:28581483	PMID:28675297	PMID:28685749	PMID:28700943	PMID:28821611	PMID:29128334
PMID:29229926	PMID:29426014	PMID:29467282	PMID:29507755	PMID:29509190	PMID:29581427	PMID:29636472	PMID:29665121	PMID:29666234	PMID:29778605	PMID:29845934	PMID:29871923
PMID:30254168	PMID:30257870	PMID:30340022	PMID:30425250	PMID:30442662	PMID:30455355	PMID:30699358	PMID:30745168	PMID:30833792	PMID:30884312	PMID:30948266	PMID:31059266
PMID:31067453	PMID:31073040	PMID:31091453	PMID:31340145	PMID:31343991	PMID:31478661	PMID:31586073	PMID:31652441	PMID:31732153	PMID:31740976	PMID:31792442	PMID:31839598
PMID:31901637	PMID:31980649	PMID:32203420	PMID:32296183	PMID:32663515	PMID:32687490	PMID:32807901	PMID:32812023	PMID:32814769	PMID:32842143	PMID:32877691	PMID:32894464
PMID:32905556	PMID:32963011	PMID:33022573	PMID:33141564	PMID:33144569	PMID:33239621	PMID:33306668	PMID:33417871	PMID:33525943	PMID:33536335	PMID:33545068	PMID:33762435
PMID:33766124	PMID:33845483	PMID:33961781	PMID:34189442	PMID:34349018	PMID:34373451	PMID:34599178	PMID:34687317	PMID:34711951	PMID:34728620	PMID:34732716	PMID:34761751
PMID:34901782	PMID:35013429	PMID:35032548	PMID:35122005	PMID:35140242	PMID:35182466	PMID:35235311	PMID:35256949	PMID:35271311	PMID:35439318	PMID:35446349	PMID:35509820
PMID:35530310	PMID:35546148	PMID:35681168	PMID:35701858	PMID:35776542	PMID:35777956	PMID:35831314	PMID:35944360	PMID:36159747	PMID:36180527	PMID:36215168	PMID:36538041
PMID:36543142	PMID:36610398	PMID:36779763	PMID:36961772	PMID:37024974	PMID:37071682	PMID:37167062	PMID:37217651	PMID:37223481	PMID:37314180	PMID:37314216	PMID:37317656
PMID:37536630	PMID:37616343	PMID:37689310	PMID:37827155	PMID:38113892	PMID:38303107	PMID:38866022	PMID:39358380

PSMD11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	32,444,510 - 32,483,319 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	32,444,379 - 32,483,319 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	30,771,528 - 30,810,337 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	27,795,615 - 27,832,155 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	27,795,614 - 27,832,154	NCBI
Celera	17	27,681,703 - 27,718,244 (+)	NCBI		Celera
Cytogenetic Map	17	q11.2	NCBI
HuRef	17	26,958,102 - 26,996,871 (+)	NCBI		HuRef
CHM1_1	17	30,833,949 - 30,872,799 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	33,390,282 - 33,429,086 (+)	NCBI		T2T-CHM13v2.0

Psmd11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	80,319,441 - 80,364,074 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	80,319,441 - 80,364,074 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	80,428,615 - 80,473,248 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	80,428,615 - 80,473,248 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	80,242,117 - 80,285,635 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	80,244,823 - 80,288,160 (+)	NCBI		MGSCv36	mm8
Celera	11	90,066,404 - 90,109,923 (+)	NCBI		Celera
Cytogenetic Map	11	B5	NCBI
cM Map	11	47.89	NCBI

Psmd11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	65,923,669 - 65,977,523 (+)	NCBI		GRCr8
mRatBN7.2	10	65,433,853 - 65,479,774 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	65,433,853 - 65,479,766 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	70,061,973 - 70,106,425 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	69,567,286 - 69,611,745 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	65,029,041 - 65,073,423 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	67,810,655 - 67,857,562 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	67,810,655 - 67,857,223 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	67,465,213 - 67,511,247 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	68,664,950 - 68,710,616 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	68,679,156 - 68,723,345 (+)	NCBI
Celera	10	64,392,663 - 64,437,757 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

Psmd11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955481	7,364,543 - 7,405,504 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955481	7,364,543 - 7,402,770 (+)	NCBI	ChiLan1.0	ChiLan1.0

PSMD11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	31,976,086 - 32,013,242 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	33,856,001 - 33,893,083 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	24,292,990 - 24,331,690 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	24,583,382 - 24,621,458 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	24,585,755 - 24,621,013 (-)	Ensembl	panpan1.1		panPan2

PSMD11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	40,507,227 - 40,538,967 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	40,508,541 - 40,538,566 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	39,666,114 - 39,697,870 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	41,323,304 - 41,355,110 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	41,324,628 - 41,354,721 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	40,109,437 - 40,141,191 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	40,403,654 - 40,435,435 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	40,478,360 - 40,510,143 (-)	NCBI		UU_Cfam_GSD_1.0

Psmd11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	39,541,633 - 39,591,809 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936538	2,418,454 - 2,456,411 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936538	2,420,618 - 2,456,163 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PSMD11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	42,498,941 - 42,529,805 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	42,498,711 - 42,529,853 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	44,257,980 - 44,287,869 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PSMD11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	25,999,575 - 26,040,033 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	25,999,569 - 26,042,793 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666075	4,002,452 - 4,045,543 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Psmd11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624875	495,263 - 534,433 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624875	495,353 - 534,433 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in PSMD11
21 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 17q11.2(chr17:28947825-32490020)x1	copy number loss	See cases [RCV000143027]	Chr17:28947825..32490020 [GRCh38] Chr17:27274843..30817038 [GRCh37] Chr17:24298969..27841151 [NCBI36] Chr17:17q11.2	pathogenic
GRCh37/hg19 17q11.1-11.2(chr17:25403446-31685464)x3	copy number gain	not provided [RCV000762776]	Chr17:25403446..31685464 [GRCh37] Chr17:17q11.1-11.2	likely pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)	copy number gain	See cases [RCV000511439]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q11.2-12(chr17:29578241-32142196)x1	copy number loss	See cases [RCV000511107]	Chr17:29578241..32142196 [GRCh37] Chr17:17q11.2-12	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3	copy number gain	See cases [RCV000512441]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q11.2(chr17:30484937-31108798)x3	copy number gain	not provided [RCV000683916]	Chr17:30484937..31108798 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3	copy number gain	not provided [RCV000739325]	Chr17:12344..81057996 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3	copy number gain	not provided [RCV000739324]	Chr17:8547..81060040 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
NM_002815.3(PSMD11):c.850-3_850delCAGA	microsatellite	Short stature [RCV000736220]	Chr17:32477518..32477521 [GRCh38] Chr17:30804536..30804539 [GRCh37] Chr17:17q11.2	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3	copy number gain	not provided [RCV000739320]	Chr17:7214..81058310 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q11.2(chr17:30805795-30814479)x1	copy number loss	not provided [RCV000752002]	Chr17:30805795..30814479 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.2(chr17:30805795-30827688)x1	copy number loss	not provided [RCV000752003]	Chr17:30805795..30827688 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.2(chr17:30805795-30831245)x1	copy number loss	not provided [RCV000752004]	Chr17:30805795..30831245 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.2(chr17:30805795-30835770)x1	copy number loss	not provided [RCV000752005]	Chr17:30805795..30835770 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.2(chr17:30809455-30831245)x1	copy number loss	not provided [RCV000752006]	Chr17:30809455..30831245 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.2(chr17:30809455-30832175)x1	copy number loss	not provided [RCV000752007]	Chr17:30809455..30832175 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17q11.2(chr17:30809455-30835770)x1	copy number loss	not provided [RCV000752008]	Chr17:30809455..30835770 [GRCh37] Chr17:17q11.2	benign
GRCh37/hg19 17p11.2-q21.2(chr17:21690653-38772647)x3	copy number gain	not provided [RCV000846852]	Chr17:21690653..38772647 [GRCh37] Chr17:17p11.2-q21.2	pathogenic
GRCh37/hg19 17q11.2-12(chr17:30497948-31819040)x1	copy number loss	See cases [RCV000447945]	Chr17:30497948..31819040 [GRCh37] Chr17:17q11.2-12	uncertain significance
NM_002815.4(PSMD11):c.775A>C (p.Ile259Leu)	single nucleotide variant	not specified [RCV004316268]	Chr17:32473932 [GRCh38] Chr17:30800950 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.2-12(chr17:29989741-32355632)	copy number loss	Nanophthalmos 4 [RCV001260292]	Chr17:29989741..32355632 [GRCh37] Chr17:17q11.2-12	pathogenic
NM_002815.4(PSMD11):c.1246A>G (p.Asn416Asp)	single nucleotide variant	not specified [RCV004329987]	Chr17:32480608 [GRCh38] Chr17:30807626 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.655G>A (p.Ala219Thr)	single nucleotide variant	not specified [RCV004114303]	Chr17:32473812 [GRCh38] Chr17:30800830 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.646A>G (p.Ile216Val)	single nucleotide variant	not specified [RCV004227673]	Chr17:32473803 [GRCh38] Chr17:30800821 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.331T>A (p.Leu111Ile)	single nucleotide variant	not specified [RCV004200776]	Chr17:32464061 [GRCh38] Chr17:30791079 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.260G>A (p.Arg87His)	single nucleotide variant	not specified [RCV004155664]	Chr17:32454561 [GRCh38] Chr17:30781579 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.307A>G (p.Thr103Ala)	single nucleotide variant	not specified [RCV004135180]	Chr17:32454608 [GRCh38] Chr17:30781626 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.2-12(chr17:30572862-35843988)	copy number loss	Chromosome 17q12 deletion syndrome [RCV003319594]	Chr17:30572862..35843988 [GRCh37] Chr17:17q11.2-12	pathogenic
NM_002815.4(PSMD11):c.940C>T (p.Arg314Trp)	single nucleotide variant	not specified [RCV004340683]	Chr17:32479278 [GRCh38] Chr17:30806296 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.2(chr17:30579124-30861865)x3	copy number gain	not provided [RCV003485151]	Chr17:30579124..30861865 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.2(chr17:29305509-31246638)x3	copy number gain	not specified [RCV003987238]	Chr17:29305509..31246638 [GRCh37] Chr17:17q11.2	pathogenic
GRCh37/hg19 17q11.2(chr17:28277040-30903559)x1	copy number loss	not specified [RCV003987216]	Chr17:28277040..30903559 [GRCh37] Chr17:17q11.2	pathogenic
NM_002815.4(PSMD11):c.419C>G (p.Thr140Ser)	single nucleotide variant	not specified [RCV004513335]	Chr17:32464549 [GRCh38] Chr17:30791567 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.740C>T (p.Ala247Val)	single nucleotide variant	not specified [RCV004513337]	Chr17:32473897 [GRCh38] Chr17:30800915 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.865T>C (p.Cys289Arg)	single nucleotide variant	not specified [RCV004513338]	Chr17:32477536 [GRCh38] Chr17:30804554 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.1139del (p.Gln380fs)	deletion	not provided [RCV004729441]	Chr17:32480501 [GRCh38] Chr17:30807519 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.644-8A>G	single nucleotide variant	not provided [RCV004769187]	Chr17:32473793 [GRCh38] Chr17:30800811 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.1192G>T (p.Glu398Ter)	single nucleotide variant	not provided [RCV005250849]	Chr17:32480554 [GRCh38] Chr17:30807572 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.697T>A (p.Tyr233Asn)	single nucleotide variant	not provided [RCV004770512]	Chr17:32473854 [GRCh38] Chr17:30800872 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.2-12(chr17:30497948-31819040)	copy number loss	not specified [RCV002052592]	Chr17:30497948..31819040 [GRCh37] Chr17:17q11.2-12	uncertain significance
NM_002815.4(PSMD11):c.17T>C (p.Val6Ala)	single nucleotide variant	not specified [RCV004151290]	Chr17:32444540 [GRCh38] Chr17:30771558 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.698A>G (p.Tyr233Cys)	single nucleotide variant	not specified [RCV004087499]	Chr17:32473855 [GRCh38] Chr17:30800873 [GRCh37] Chr17:17q11.2	uncertain significance
GRCh37/hg19 17q11.2(chr17:28387597-30812008)x1	copy number loss	not provided [RCV003483317]	Chr17:28387597..30812008 [GRCh37] Chr17:17q11.2	pathogenic
NM_002815.4(PSMD11):c.592A>G (p.Asn198Asp)	single nucleotide variant	not provided [RCV003740575]	Chr17:32469142 [GRCh38] Chr17:30796160 [GRCh37] Chr17:17q11.2	uncertain significance
NM_002815.4(PSMD11):c.491C>G (p.Ala164Gly)	single nucleotide variant	not specified [RCV004513336]	Chr17:32469041 [GRCh38] Chr17:30796059 [GRCh37] Chr17:17q11.2	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	3086
Count of miRNA genes:	1065
Interacting mature miRNAs:	1308
Transcripts:	ENST00000261712, ENST00000457654, ENST00000469475, ENST00000481992, ENST00000493026, ENST00000578213, ENST00000578397, ENST00000579451, ENST00000580904, ENST00000584340, ENST00000585265
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
597199608	GWAS1295682_H	systolic blood pressure QTL GWAS1295682 (human)		2e-11	systolic blood pressure	systolic blood pressure (CMO:0000004)	17	32450906	32450907	Human
1298406	BP16_H	Blood pressure QTL 16 (human)		0.0004	Blood pressure	hypertension susceptibility	17	14778647	40778647	Human
597129378	GWAS1225452_H	pulse pressure measurement QTL GWAS1225452 (human)		9e-11	pulse pressure measurement	pulse pressure (CMO:0000292)	17	32450906	32450907	Human
597448507	GWAS1544581_H	systolic blood pressure QTL GWAS1544581 (human)		3e-09	systolic blood pressure	systolic blood pressure (CMO:0000004)	17	32445559	32445560	Human
597115243	GWAS1211317_H	systolic blood pressure QTL GWAS1211317 (human)		2e-10	systolic blood pressure	systolic blood pressure (CMO:0000004)	17	32450906	32450907	Human
597321462	GWAS1417536_H	Sphingomyelin (d18:2/24:1, d18:1/24:2) measurement QTL GWAS1417536 (human)		0.000009	Sphingomyelin (d18:2/24:1, d18:1/24:2) measurement		17	32470049	32470050	Human
597320964	GWAS1417038_H	smoking initiation QTL GWAS1417038 (human)		9e-22	smoking initiation		17	32464485	32464486	Human

RH15931

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,807,816 - 30,807,935	UniSTS	GRCh37
Build 36	17	27,831,929 - 27,832,048	RGD	NCBI36
Celera	17	27,718,018 - 27,718,137	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,994,350 - 26,994,469	UniSTS

RH80424

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,808,568 - 30,808,814	UniSTS	GRCh37
Build 36	17	27,832,681 - 27,832,927	RGD	NCBI36
Celera	17	27,718,770 - 27,719,016	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,995,102 - 26,995,348	UniSTS

G42336

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,770,341 - 30,770,542	UniSTS	GRCh37
Build 36	17	27,794,454 - 27,794,655	RGD	NCBI36
Celera	17	27,680,542 - 27,680,743	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,956,962 - 26,957,163	UniSTS

RH104290

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,777,596 - 30,777,724	UniSTS	GRCh37
Build 36	17	27,801,709 - 27,801,837	RGD	NCBI36
Celera	17	27,687,797 - 27,687,925	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,964,218 - 26,964,346	UniSTS

G42372

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,784,569 - 30,784,730	UniSTS	GRCh37
Build 36	17	27,808,682 - 27,808,843	RGD	NCBI36
Celera	17	27,694,770 - 27,694,931	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,971,101 - 26,971,262	UniSTS

G65638

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,770,534 - 30,771,045	UniSTS	GRCh37
Build 36	17	27,794,647 - 27,795,158	RGD	NCBI36
Celera	17	27,680,735 - 27,681,246	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,957,155 - 26,957,666	UniSTS

RH78801

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,771,156 - 30,771,296	UniSTS	GRCh37
Build 36	17	27,795,269 - 27,795,409	RGD	NCBI36
Celera	17	27,681,357 - 27,681,497	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,957,777 - 26,957,917	UniSTS
GeneMap99-GB4 RH Map	17	283.13	UniSTS

WI-16331

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	30,810,171 - 30,810,313	UniSTS	GRCh37
Build 36	17	27,834,284 - 27,834,426	RGD	NCBI36
Celera	17	27,720,373 - 27,720,515	RGD
Cytogenetic Map	17	q11.2	UniSTS
HuRef	17	26,996,705 - 26,996,847	UniSTS
GeneMap99-GB4 RH Map	17	283.13	UniSTS
Whitehead-RH Map	17	305.2	UniSTS

L18426

Human Assembly	Chr	Position (strand)	Source
Cytogenetic Map	18	q12.1-q21.1	UniSTS
Cytogenetic Map	10	q23.1	UniSTS
Cytogenetic Map	2	q37	UniSTS
Cytogenetic Map	5	q31.3	UniSTS
Cytogenetic Map	20	q13.1	UniSTS
Cytogenetic Map	14	q21	UniSTS
Cytogenetic Map	6	p21.33	UniSTS
Cytogenetic Map	10	p11	UniSTS
Cytogenetic Map	5	q35.3	UniSTS
Cytogenetic Map	2	q37.1	UniSTS
Cytogenetic Map	15	q22.31	UniSTS
Cytogenetic Map	17	q25.1	UniSTS
Cytogenetic Map	5	q12.3	UniSTS
Cytogenetic Map	8	p21.2	UniSTS
Cytogenetic Map	14	q21.3	UniSTS
Cytogenetic Map	11	q12.3	UniSTS
Cytogenetic Map	10	p13	UniSTS
Cytogenetic Map	3	q13.31	UniSTS
Cytogenetic Map	15	q22.2	UniSTS
Cytogenetic Map	4	p16.3	UniSTS
Cytogenetic Map	17	q25.3	UniSTS
Cytogenetic Map	1	q21	UniSTS
Cytogenetic Map	3	q21.3	UniSTS
Cytogenetic Map	9	p13.2	UniSTS
Cytogenetic Map	20	q13.12	UniSTS
Cytogenetic Map	9	q34.1	UniSTS
Cytogenetic Map	1	q21.3	UniSTS
Cytogenetic Map	1	p22.1	UniSTS
Cytogenetic Map	19	q13.31	UniSTS
Cytogenetic Map	22	q11.23	UniSTS
Cytogenetic Map	19	p13.1-p12	UniSTS
Cytogenetic Map	18	p11.31-p11.21	UniSTS
Cytogenetic Map	2	p23.1	UniSTS
Cytogenetic Map	19	q13.43	UniSTS
Cytogenetic Map	6	q25.3	UniSTS
Cytogenetic Map	1	p34.3	UniSTS
Cytogenetic Map	11	q14	UniSTS
Cytogenetic Map	9	q21.32	UniSTS
Cytogenetic Map	1	p34-p33	UniSTS
Cytogenetic Map	3	q23	UniSTS
Cytogenetic Map	17	q21.1	UniSTS
Cytogenetic Map	15	q21	UniSTS
Cytogenetic Map	6	p21.3	UniSTS
Cytogenetic Map	2	q12.3	UniSTS
Cytogenetic Map	20	q11.2-q13.2	UniSTS
Cytogenetic Map	15	q26.3	UniSTS
Cytogenetic Map	8	p23-p22	UniSTS
Cytogenetic Map	13	q32.3	UniSTS
Cytogenetic Map	17	q21-q22	UniSTS
Cytogenetic Map	2	q36.1	UniSTS
Cytogenetic Map	5	p13	UniSTS
Cytogenetic Map	5	p12	UniSTS
Cytogenetic Map	12	q21.1	UniSTS
Cytogenetic Map	3	q26.32	UniSTS
Cytogenetic Map	13	q11	UniSTS
Cytogenetic Map	1	p35.3	UniSTS
Cytogenetic Map	7	p12.3	UniSTS
Cytogenetic Map	17	p12	UniSTS
Cytogenetic Map	17	q11.2	UniSTS
Cytogenetic Map	13	q14.11	UniSTS
Cytogenetic Map	3	p25.1	UniSTS
Cytogenetic Map	X	p22	UniSTS
Cytogenetic Map	21	q22.3	UniSTS
Cytogenetic Map	17	q11.2-q12	UniSTS
Cytogenetic Map	11	q23.3	UniSTS
Cytogenetic Map	2	p25	UniSTS
Cytogenetic Map	11	q13	UniSTS
Cytogenetic Map	8	p11.22	UniSTS
Cytogenetic Map	7	p22	UniSTS
Cytogenetic Map	16	q21	UniSTS
Cytogenetic Map	1	p21.3	UniSTS
Cytogenetic Map	19	q13.13	UniSTS
Cytogenetic Map	4	q22.1	UniSTS
Cytogenetic Map	1	p13.3	UniSTS
Cytogenetic Map	20	q13.3	UniSTS
Cytogenetic Map	7	q36.3	UniSTS
Cytogenetic Map	2	q33.2	UniSTS
Cytogenetic Map	6	p22.3-p22.1	UniSTS
Cytogenetic Map	1	p35-p34.3	UniSTS
Cytogenetic Map	5	q35.1	UniSTS
Cytogenetic Map	1	p36.13	UniSTS
Cytogenetic Map	12	p13.3	UniSTS
Cytogenetic Map	7	q22	UniSTS
Cytogenetic Map	2	q11.2	UniSTS
Cytogenetic Map	2	p23.3	UniSTS
Cytogenetic Map	X	p11	UniSTS
Cytogenetic Map	19	q13	UniSTS
Cytogenetic Map	2	q32.3	UniSTS
Cytogenetic Map	4	q22.1-q23	UniSTS
Cytogenetic Map	1	q22	UniSTS
Cytogenetic Map	17	q22-q23.2	UniSTS
Cytogenetic Map	17	q22	UniSTS
Cytogenetic Map	18	q22.3	UniSTS
Cytogenetic Map	2	p16.1	UniSTS
Cytogenetic Map	12	q24.1-q24.3	UniSTS
Cytogenetic Map	11	p11.2	UniSTS
Cytogenetic Map	1	p34.1	UniSTS
Cytogenetic Map	22	q13	UniSTS
Cytogenetic Map	12	q22	UniSTS
Cytogenetic Map	19	q13.2	UniSTS
Cytogenetic Map	11	q24.2	UniSTS
Cytogenetic Map	X	q22.3	UniSTS
Cytogenetic Map	3	q13.13	UniSTS
Cytogenetic Map	12	q24.31	UniSTS
Cytogenetic Map	3	q27.3	UniSTS
Cytogenetic Map	17	q21.32	UniSTS
Cytogenetic Map	2	q35	UniSTS
Cytogenetic Map	9	p24.2	UniSTS
Cytogenetic Map	14	q32.11	UniSTS
Cytogenetic Map	2	q21.1	UniSTS
Cytogenetic Map	15	q23	UniSTS
Cytogenetic Map	16	q22.2	UniSTS
Cytogenetic Map	7	q22.1	UniSTS
Cytogenetic Map	3	p22.1	UniSTS
Cytogenetic Map	19	q13.33	UniSTS
Cytogenetic Map	3	p14.3	UniSTS
Cytogenetic Map	1	p36.21	UniSTS
Cytogenetic Map	1	p31.3	UniSTS
Cytogenetic Map	12	p12	UniSTS
Cytogenetic Map	6	p21.1	UniSTS
Cytogenetic Map	6	p25	UniSTS
Cytogenetic Map	16	p11.2	UniSTS
Cytogenetic Map	14	q23	UniSTS
Cytogenetic Map	1	q42.1-q43	UniSTS
Cytogenetic Map	5	q31.1	UniSTS
Cytogenetic Map	1	p32	UniSTS
Cytogenetic Map	12	q12	UniSTS
Cytogenetic Map	6	q25.1-q26	UniSTS
Cytogenetic Map	5	q13	UniSTS
Cytogenetic Map	12	q13.11-q14.3	UniSTS
Cytogenetic Map	7	p11	UniSTS
Cytogenetic Map	3	p21.31	UniSTS
Cytogenetic Map	17	q23.1	UniSTS
Cytogenetic Map	X	q13-q21	UniSTS
Cytogenetic Map	16	p12.2	UniSTS
Cytogenetic Map	10	q22.1	UniSTS
Cytogenetic Map	1	q41	UniSTS
Cytogenetic Map	17	p13.1	UniSTS
Cytogenetic Map	12	p13.2	UniSTS
Cytogenetic Map	3	q28-q29	UniSTS
Cytogenetic Map	7	q11.21	UniSTS
Cytogenetic Map	1	q41-q42.2	UniSTS
Cytogenetic Map	12	q24.2-q24.31	UniSTS
Cytogenetic Map	8	q24.3	UniSTS
Cytogenetic Map	11	p11.11	UniSTS
Cytogenetic Map	11	q22-q23	UniSTS
Cytogenetic Map	3	q21	UniSTS
Cytogenetic Map	1	q43	UniSTS
Cytogenetic Map	1	p13.2	UniSTS
Cytogenetic Map	15	q25.2	UniSTS
Cytogenetic Map	10	q11.21	UniSTS
Cytogenetic Map	17	q23.3	UniSTS
Cytogenetic Map	8	q11.2	UniSTS
Cytogenetic Map	15	q11-q13	UniSTS
Cytogenetic Map	13	q12-q14	UniSTS
Cytogenetic Map	18	q21.1	UniSTS
Cytogenetic Map	2	p21	UniSTS
Cytogenetic Map	22	q13.31	UniSTS
Cytogenetic Map	14	q24.1	UniSTS
Cytogenetic Map	1	p36.11	UniSTS
Cytogenetic Map	19	q13.12	UniSTS
Cytogenetic Map	6	p25.2	UniSTS
Cytogenetic Map	1	q44	UniSTS
Cytogenetic Map	19	q13.42	UniSTS
Cytogenetic Map	19	p13.2	UniSTS
Cytogenetic Map	17	p13.2	UniSTS
Cytogenetic Map	10	q26.3	UniSTS
Cytogenetic Map	13	q32.2	UniSTS
Cytogenetic Map	5	q11.2	UniSTS
Cytogenetic Map	11	p15.1	UniSTS
Cytogenetic Map	11	q24	UniSTS
Cytogenetic Map	2	q23.3	UniSTS
Cytogenetic Map	1	p31.1	UniSTS
Cytogenetic Map	10	q25.3	UniSTS
Cytogenetic Map	14	q31	UniSTS
Cytogenetic Map	8	p12-p11	UniSTS
Cytogenetic Map	11	p15.4	UniSTS
Cytogenetic Map	8	p11.2	UniSTS
Cytogenetic Map	7	p11.2	UniSTS
Cytogenetic Map	X	q28	UniSTS
Cytogenetic Map	15	q26.1	UniSTS
Cytogenetic Map	7	p15.3	UniSTS
Cytogenetic Map	17	q23.2	UniSTS
Cytogenetic Map	X	q25	UniSTS
Cytogenetic Map	21	q22.1	UniSTS
Cytogenetic Map	4	q25-q27	UniSTS
Cytogenetic Map	3	q25.33	UniSTS
Cytogenetic Map	3	q25.31	UniSTS
Cytogenetic Map	1	p34.2	UniSTS
Cytogenetic Map	1	p36.22	UniSTS
Cytogenetic Map	16	q22.1	UniSTS
Cytogenetic Map	X	p22.33	UniSTS
Cytogenetic Map	Y	p11.3	UniSTS
Cytogenetic Map	19	q13.1	UniSTS
Cytogenetic Map	3	p22-p21.3	UniSTS
Cytogenetic Map	2	p15-p13	UniSTS
Cytogenetic Map	X	p11.4	UniSTS
Cytogenetic Map	20	p11	UniSTS
Cytogenetic Map	3	p14.1	UniSTS
Cytogenetic Map	1	q25.2	UniSTS
Cytogenetic Map	13	q11-q12	UniSTS
Cytogenetic Map	9	q34	UniSTS
Cytogenetic Map	7	q21.13	UniSTS
Cytogenetic Map	20	q13.33	UniSTS
Cytogenetic Map	9	q33.3	UniSTS
Cytogenetic Map	11	q13.1	UniSTS
Cytogenetic Map	3	q12	UniSTS
Cytogenetic Map	2	p25.1-p24.1	UniSTS
Cytogenetic Map	16	p13.11	UniSTS
Cytogenetic Map	6	q16.1	UniSTS
Cytogenetic Map	13	q14.13	UniSTS
Cytogenetic Map	5	p13.1	UniSTS
Cytogenetic Map	4	q28-q32	UniSTS
Cytogenetic Map	11	p15	UniSTS
Cytogenetic Map	1	p35.1	UniSTS
Cytogenetic Map	1	p32-p31	UniSTS
Cytogenetic Map	1	p21	UniSTS
Cytogenetic Map	7	p14.2	UniSTS
Cytogenetic Map	6	q25	UniSTS
Cytogenetic Map	5	q31	UniSTS
Cytogenetic Map	18	p11.22	UniSTS
Cytogenetic Map	9	p24.3	UniSTS
Cytogenetic Map	2	p25.3	UniSTS
Cytogenetic Map	1	q42.3	UniSTS
Cytogenetic Map	1	q22-q23	UniSTS
Cytogenetic Map	4	q21.22	UniSTS
Cytogenetic Map	13	q14.2	UniSTS
Cytogenetic Map	2	q24.3	UniSTS
Cytogenetic Map	7	p22.1	UniSTS
Cytogenetic Map	9	q31-q33	UniSTS
Cytogenetic Map	11	q13.4	UniSTS
Cytogenetic Map	10	p11.21	UniSTS
Cytogenetic Map	9	q32	UniSTS
Cytogenetic Map	3	q21.1	UniSTS
Cytogenetic Map	10	q11.23	UniSTS
Cytogenetic Map	9	q22.1-q22.2	UniSTS
Cytogenetic Map	4	q26	UniSTS
Cytogenetic Map	4	q28.1	UniSTS
Cytogenetic Map	9	q31.3	UniSTS
Cytogenetic Map	6	p22.3	UniSTS
Cytogenetic Map	21	q21.1	UniSTS
Cytogenetic Map	19	q13.32	UniSTS
Cytogenetic Map	18	q11.2	UniSTS
Cytogenetic Map	17	q21.31	UniSTS
Cytogenetic Map	15	q26.2	UniSTS
Cytogenetic Map	14	q22.1	UniSTS
Cytogenetic Map	12	p12.3	UniSTS
Cytogenetic Map	12	q13.12	UniSTS
Cytogenetic Map	20	q11.23	UniSTS
Cytogenetic Map	12	q13.11	UniSTS
Cytogenetic Map	9	p13.3	UniSTS
Cytogenetic Map	11	q13.2	UniSTS
Cytogenetic Map	12	q14.3	UniSTS
Cytogenetic Map	5	q33.3	UniSTS
Cytogenetic Map	5	p13.2	UniSTS
Cytogenetic Map	4	q35.2	UniSTS
Cytogenetic Map	4	q28.2	UniSTS
Cytogenetic Map	16	q24.1	UniSTS
Cytogenetic Map	12	q23.1	UniSTS
Cytogenetic Map	11	q24.3	UniSTS
Cytogenetic Map	10	q24.32	UniSTS
Cytogenetic Map	10	q22.2	UniSTS
Cytogenetic Map	20	p13	UniSTS
Cytogenetic Map	6	q25.1	UniSTS
Cytogenetic Map	20	q13.2	UniSTS
Cytogenetic Map	8	q23.3	UniSTS
Cytogenetic Map	16	q23.2	UniSTS
Cytogenetic Map	3	p22.2	UniSTS
Cytogenetic Map	X	p21.1	UniSTS
Cytogenetic Map	7	p14.3	UniSTS
Cytogenetic Map	X	p11.23	UniSTS
Cytogenetic Map	14	q32.31	UniSTS
Cytogenetic Map	5	p15.3	UniSTS
Cytogenetic Map	15	q21.2	UniSTS
Cytogenetic Map	22	q12	UniSTS
Cytogenetic Map	4	q22	UniSTS
Cytogenetic Map	2	p13.1	UniSTS
Cytogenetic Map	19	q13.1-q13.2	UniSTS
Cytogenetic Map	1	p36.3	UniSTS
Cytogenetic Map	17	q21	UniSTS
Cytogenetic Map	2	q32.1	UniSTS
Cytogenetic Map	7	q31.3	UniSTS
Cytogenetic Map	5	q33.1	UniSTS
Cytogenetic Map	13	q13.1	UniSTS
Cytogenetic Map	8	p23.1	UniSTS
Cytogenetic Map	15	q	UniSTS
Cytogenetic Map	3	p26	UniSTS
Cytogenetic Map	1	p13-p12	UniSTS
Cytogenetic Map	21	q22.11	UniSTS
Cytogenetic Map	14	q32.2	UniSTS
Cytogenetic Map	15	q24.1	UniSTS
Cytogenetic Map	4	p16.1	UniSTS
Cytogenetic Map	15	q11.2	UniSTS
Cytogenetic Map	3	p25.2	UniSTS
Cytogenetic Map	7	p22.3	UniSTS
Cytogenetic Map	10	q21.1	UniSTS
Cytogenetic Map	6	q21	UniSTS
Cytogenetic Map	21	q22.2	UniSTS
Cytogenetic Map	1	q23.3	UniSTS
Cytogenetic Map	1	p36	UniSTS
Cytogenetic Map	1	q25	UniSTS
Cytogenetic Map	15	q24	UniSTS
Cytogenetic Map	3	p25.3	UniSTS
Cytogenetic Map	2	q22.3	UniSTS
Cytogenetic Map	20	p11.21	UniSTS
Cytogenetic Map	12	q24.1	UniSTS
Cytogenetic Map	5	q31.2	UniSTS
Cytogenetic Map	2	p25.2	UniSTS
Cytogenetic Map	17	p11.2	UniSTS
Cytogenetic Map	19	q13.3	UniSTS
Cytogenetic Map	22	q13.33	UniSTS
Cytogenetic Map	2	p25.1	UniSTS
Cytogenetic Map	4	q12	UniSTS
Cytogenetic Map	1	q12	UniSTS
Cytogenetic Map	22	q11.22	UniSTS
Cytogenetic Map	20	q11.22	UniSTS
Cytogenetic Map	8	p21.3	UniSTS
Cytogenetic Map	14	q32.3	UniSTS
Cytogenetic Map	7	q32	UniSTS
Cytogenetic Map	5	q14.1	UniSTS
Cytogenetic Map	12	q13.13	UniSTS
Cytogenetic Map	14	q23.3	UniSTS
Cytogenetic Map	1	q24	UniSTS
Cytogenetic Map	7	p13	UniSTS
Cytogenetic Map	17	q25	UniSTS
Cytogenetic Map	22	q11.21	UniSTS
Cytogenetic Map	5	p15.33	UniSTS
Cytogenetic Map	3	q29	UniSTS
Cytogenetic Map	9	q34.3	UniSTS
Cytogenetic Map	16	p13.13-p13.12	UniSTS
Cytogenetic Map	12	p13.31	UniSTS
Cytogenetic Map	14	q24.3	UniSTS
Cytogenetic Map	3	q27	UniSTS
Cytogenetic Map	6	q22	UniSTS
Cytogenetic Map	10	p15.3	UniSTS
Cytogenetic Map	22	q13.2	UniSTS
Cytogenetic Map	15	q15	UniSTS
Cytogenetic Map	1	p13.1	UniSTS
Cytogenetic Map	19	p12	UniSTS
Cytogenetic Map	16	q13	UniSTS
Cytogenetic Map	9	q34.11	UniSTS
Cytogenetic Map	13	q34	UniSTS
Cytogenetic Map	2	p11.2	UniSTS
Cytogenetic Map	13	q14.3	UniSTS
Cytogenetic Map	14	q24	UniSTS
Cytogenetic Map	14	q22-q24	UniSTS
Cytogenetic Map	19	p13	UniSTS
Cytogenetic Map	17	p13.3	UniSTS
Cytogenetic Map	22	q12.2	UniSTS
Cytogenetic Map	16	q24	UniSTS
Cytogenetic Map	X	p22.2	UniSTS
Cytogenetic Map	8	q13.1	UniSTS
Cytogenetic Map	1	p36.33	UniSTS
Cytogenetic Map	22	q13.1	UniSTS
Cytogenetic Map	17	q12	UniSTS
Cytogenetic Map	12	p12.1	UniSTS
Cytogenetic Map	14	q11.2	UniSTS
Cytogenetic Map	4	q35.1	UniSTS
Cytogenetic Map	20	q13.13	UniSTS
Cytogenetic Map	1	p22	UniSTS
Cytogenetic Map	16	p13.3	UniSTS
Cytogenetic Map	10	q11	UniSTS
Cytogenetic Map	8	p11.21	UniSTS
Cytogenetic Map	8	q24.11	UniSTS
Cytogenetic Map	2	q37.3	UniSTS
Cytogenetic Map	9	q22.33	UniSTS
Cytogenetic Map	9	q22.31	UniSTS
Cytogenetic Map	11	p15.5	UniSTS
Cytogenetic Map	20	q12	UniSTS
Cytogenetic Map	2	q13	UniSTS
Cytogenetic Map	7	q11.23	UniSTS
Cytogenetic Map	2	p15	UniSTS
Cytogenetic Map	12	q21.31	UniSTS
Cytogenetic Map	17	p13	UniSTS
Cytogenetic Map	19	q12	UniSTS
Cytogenetic Map	6	p22.1	UniSTS
Cytogenetic Map	11	q14.2	UniSTS
Cytogenetic Map	19	p13.3	UniSTS
Cytogenetic Map	18	p11.21	UniSTS
Cytogenetic Map	10	q22	UniSTS
Cytogenetic Map	X	q21.1	UniSTS
Cytogenetic Map	9	p21.1	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2788	2253	4974	1726	2351	6	624	1951	465	2270	7306	6472	53	3734	1	852	1744	1617	175	1


RefSeq Transcripts	NM_001270482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_002815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB003102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC005899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC079336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF001212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK093602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK223196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK290602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK300342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC000437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC004430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BP246240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ006240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000261712 ⟹ ENSP00000261712

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,510 - 32,483,319 (+)	Ensembl

Ensembl Acc Id:

ENST00000457654 ⟹ ENSP00000393185

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,474 - 32,481,471 (+)	Ensembl

Ensembl Acc Id:

ENST00000469475

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,480,078 - 32,480,962 (+)	Ensembl

Ensembl Acc Id:

ENST00000481992

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,512 - 32,447,333 (+)	Ensembl

Ensembl Acc Id:

ENST00000493026

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,476,680 - 32,481,024 (+)	Ensembl

Ensembl Acc Id:

ENST00000578213 ⟹ ENSP00000462683

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,379 - 32,464,561 (+)	Ensembl

Ensembl Acc Id:

ENST00000578397

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,504 - 32,477,829 (+)	Ensembl

Ensembl Acc Id:

ENST00000579451 ⟹ ENSP00000464434

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,505 - 32,464,567 (+)	Ensembl

Ensembl Acc Id:

ENST00000580904 ⟹ ENSP00000463728

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,445,667 - 32,454,611 (+)	Ensembl

Ensembl Acc Id:

ENST00000584340 ⟹ ENSP00000464475

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,469,072 - 32,479,282 (+)	Ensembl

Ensembl Acc Id:

ENST00000585265

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,480,192 - 32,480,982 (+)	Ensembl

Ensembl Acc Id:

ENST00000649012 ⟹ ENSP00000497128

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	32,444,461 - 32,483,295 (+)	Ensembl

RefSeq Acc Id:

NM_001270482 ⟹ NP_001257411

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	32,444,510 - 32,483,319 (+)	NCBI
HuRef	17	26,958,102 - 26,996,871 (+)	NCBI
CHM1_1	17	30,833,949 - 30,872,799 (+)	NCBI
T2T-CHM13v2.0	17	33,390,282 - 33,429,086 (+)	NCBI

Sequence:

show sequence

GTGAGAGCGGTAAGATGGCGGCGGCGGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGGCCTCCATCGACATCCTCCACTCCATCGTGAAGCGTGACATTCAGGAAAAC
GATGAAGAGGCAGTGCAAGTCAAAGAGCAGAGCATCCTGGAACTGGGATCTCTCCTGGCAAAGACTGGACAAGCTGCAGAGCTTGGAGGACTCCTGAAGTATGTACGACCCTTCTTGAATTCCATCAG
CAAGGCTAAAGCAGCTCGCCTGGTCCGATCTCTTCTTGATCTGTTTCTTGATATGGAAGCAGCTACAGGGCAGGAGGTCGAGCTGTGTTTAGAGTGCATCGAATGGGCCAAGTCAGAGAAAAGAACTT
TCTTACGCCAAGCTTTGGAGGCAAGACTGGTGTCTTTGTACTTTGATACCAAGAGGTACCAGGAAGCATTGCATTTGGGTTCTCAGCTGCTGCGGGAGTTGAAAAAGATGGACGACAAAGCTCTTTTG
GTGGAAGTACAGCTTTTAGAAAGCAAAACATACCATGCCCTGAGCAACCTGCCGAAAGCCCGAGCTGCCTTAACTTCTGCTCGAACCACAGCAAATGCCATCTACTGCCCCCCTAAATTGCAGGCCAC
CTTGGACATGCAGTCGGGTATTATCCATGCAGCAGAAGAGAAGGACTGGAAAACTGCGTACTCATACTTCTATGAGGCATTTGAGGGTTATGACTCCATCGACAGCCCCAAGGCCATCACATCTCTGA
AGTACATGTTGCTGTGCAAAATCATGCTCAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGGGAAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAAGCATTAAAATGCGTGGCTCAGGCTAGC
AAGAACAGATCACTGGCAGATTTTGAAAAGGCTCTGACAGATTACCGGGCAGAGCTCCGGGATGACCCAATCATCAGCACACACTTGGCCAAGTTGTATGATAACTTACTAGAACAGAATCTGATCCG
AGTCATTGAGCCTTTTTCCAGAGTACAGATTGAACACATATCTAGTCTCATCAAACTCTCCAAGGCCGACGTGGAAAGGAAATTATCACAGATGATTCTTGACAAGAAATTTCATGGGATTTTGGACC
AGGGGGAGGGTGTCCTGATTATTTTCGATGAACCCCCAGTAGATAAAACTTACGAAGCTGCTCTGGAAACAATTCAGAACATGAGCAAAGTAGTGGATTCCCTCTACAACAAAGCCAAGAAACTGACA
TAGGTGAGTGCTGGCTTCAGGACCCCAGGGCTGGGCAGCTCTGTCTTCTGCGTGTCGAGACTGAAAACCTCCTCCTGGTGTCCTCATGGCTTCCTGATTGACACTGCTCTGTCTTCTCTTGCAGAGTT
GGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAAACCTTGGGGGAAAATGCTAGGAGATTCTTTTTTCTTTTTGTTCTACTTTTCGCTCGGAAAGTTTTTAAATCCTCATTTGGTG
CATCTGTATTCCAGCCAATAGGTGTGCCAGTTTTCATGTAATCTTTACTGGCCCAACTTGGGAGTGGGGAAATTGCTTAAAAAAAAAGAAAAAGAAAAAAAAAAAGATTATTCTAAATAAAAGGAAAA
AGGCTTACACTACCTAAAGCTGTGCTCTCTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCCGCCAACCACTGGGGGTCCTAATCCACCTGCTGGGCATCACCTCTCCTCCTCCTCAGAATTGGG
TGTTTGCTGACCATCAAAAGCAATGACTTTTTATTCTGTTTGTACTGAACCAAAACAAACAACTGTGTATAGACTGCTGTTTTCTTTTTTATTTGAAATGAGGCATTTTGGTGTTCTTTCCCCTACCA
TACGGCCTGTCTGCCCTTCCCTCCCCACATTGGCTCCAGCAGAGTAGCCGAAGGTCCTGCCGCCGCCGCCACCACCACCACCACTGCAGCAACAACAGCAGCAGCAGCAGCAGCGCCTGCATAGCTCC
ACTCTGACCTGTGAAGGAATGGGGATGAGGCCAGGAGCTAGTGTCTACCACGGCCACACAGGGAGCAGTGTGGGCCCTTAGCCCCCAAGGGGCCTGCTATGCATGTGGCTTTTTTTTTTTTTTTAAAC
ACAGTAAACTAGATTAGTCGTCAGTGTTTTAATTGCCCCTCTTCTCCTCTCCTGCATTCCTCTCCTCTCTTCTTTCCTCTCTGTCCCTTCTCTTTCCCCTCTCAACCAGGAGACCATCATGTCTCTCT
GCCTTCCTCCTCTCCCCTCCAGGGGAGTCAGGCTGTCTGTGAAAGCCATGAGCTTCTCTCCCTCTCCCACTCCTCCTCTCCTACTTTCAGATGGATTTATTCCTTTTTTAAACAATGAACATCGGAAA
TGAGACTGTGGGGTGTGGTTTCTCTCTCTCTTTTTTTTTTAATTTTCTTTGTTGGGTTTTTGAGCAACCTCATGTCCCCTTCCCAGGGAGCTTTTTAATTTACCTCTTAGAACTCAAGTGGATGGGAA
GTAGAGCACTATGTGTCAGTATGCTTTGTTTTCTGACACGATTACACAGCGAGGCTTTAATGCCATTTGGGTAGGTGAGCTTCTGCACTTCTGTTGTGCTGAACTGTATTTTCTTCTCTCATCTCCTC
TTTGTCTTTTTCTCTTTTCCTCTCCTTCCTGCCTTCTTCTGCTGGCCTCCTTTTCTCTTTCTTTACCTTCCTTGGATTATCCTTCCAGGTTTTCATAATAAATTTATATTTTGTAAAAGGATTTTGTT
GTACCAGGTTTTGCATCCTCACTGAATCTGACTGGCTTTTATTTTCCTCTCCAAAATCAGGTTTTTGTTCTCAACATCTTTCCCCATCATGTCTAGTCACTGTTTTGGTTTTGGCACCATCAGTATCA
AATGTACAAACGGTTCTTGCTAACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAAATAATTTTTTTTTTTTTCAAAAGGTGTCTTTTTCTTGAGTGCTGGAGGGCTTCCAAGCAAGT
CCAGACAGCTCTGTGTGGCCCCACACTAGTCTAGCTCTCATCTGGCCAAAGCTGTTATCTCATTTGTGTAATGGGAGTCCTTAAGGTAAATTTGGGGTCCAAACTTGGAGGGCTTTGGGGGCAAGAAA
GTTGGTGTGTGAGTTCTGAGGTTGGAAATGAGTTCAGGTGTCTTCTTCCAGGGCAGCATGGTCCAGTGAGCACATGTAAGTTTGGGCAGTAGATCCTCTGAGCCTACTTTCTCTTCTACTCAGTGAGG
ATGCTGCTTCCTTGGCAGGTGATTGTGATGTGAAGCTTAGTAAGTCATAGACGTGCAGGTGTCTGGAGAGTCCTGACATGCAGTTGTGGTTTCGTTTCCTTTTGGAATCTTCAAAGGCAGCGATTTTC
ATATTGCCTCACACCCTGGCGGGGGCGGGGGGCTCTGGGACCACTGGGGGACCTGCTAAATCCTCTTCAGTCTGAGCAGTTCAGCCATTGTCAGTTTTAGTATTGTGTCTCTGTATTTCACTTGCAGA
AAGAGCTTTGCTTCTATAAAGGACTTTAAAAAGTACTCCAAAGAGATCTAGTTTTGGAGTAGAGGGGAGATGTTTTCTCAAACTTAGGGCAGTCCTGAGATGCTCAGGCAGTAGCCCTTTTCTCAGTT
CCCTTTGCGGGTCTTGGTCAGATGATGCCCTCTAGACCCGTGCTGTCCAATATGTAGCCGCTAGCCATGTGCAGCTGTCAGGCCCTTGCAACGTGGCTGGTTCGAGCTGTGATACACTGCAAGTGTAA
ACACAAACCAGACTTCGAAGGCTTAGTATGATAACAAAAGAAAAGGAGTGTAAAATATGTCAATAACTTTTTTATATATGTGTTGAAATATTTTGGGTATTGGGTTAAATAAAATATATTATTAAAAT
TCA

hide sequence

RefSeq Acc Id:

NM_002815 ⟹ NP_002806

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	32,444,510 - 32,483,319 (+)	NCBI
GRCh37	17	30,771,481 - 30,810,337 (+)	NCBI
Build 36	17	27,795,615 - 27,832,155 (+)	NCBI Archive
HuRef	17	26,958,102 - 26,996,871 (+)	NCBI
CHM1_1	17	30,833,949 - 30,872,799 (+)	NCBI
T2T-CHM13v2.0	17	33,390,282 - 33,429,086 (+)	NCBI

Sequence:

show sequence

GTGAGAGCGGTAAGATGGCGGCGGCGGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAG
CACCGACCGGGAGGCCTCCATCGACATCCTCCACTCCATCGTGAAGCGTGACATTCAGGAAAACGATGAAGAGGCAGTGCAAGTCAAAGAGCAGAGCATCCTGGAACTGGGATCTCTCCTGGCAAAGA
CTGGACAAGCTGCAGAGCTTGGAGGACTCCTGAAGTATGTACGACCCTTCTTGAATTCCATCAGCAAGGCTAAAGCAGCTCGCCTGGTCCGATCTCTTCTTGATCTGTTTCTTGATATGGAAGCAGCT
ACAGGGCAGGAGGTCGAGCTGTGTTTAGAGTGCATCGAATGGGCCAAGTCAGAGAAAAGAACTTTCTTACGCCAAGCTTTGGAGGCAAGACTGGTGTCTTTGTACTTTGATACCAAGAGGTACCAGGA
AGCATTGCATTTGGGTTCTCAGCTGCTGCGGGAGTTGAAAAAGATGGACGACAAAGCTCTTTTGGTGGAAGTACAGCTTTTAGAAAGCAAAACATACCATGCCCTGAGCAACCTGCCGAAAGCCCGAG
CTGCCTTAACTTCTGCTCGAACCACAGCAAATGCCATCTACTGCCCCCCTAAATTGCAGGCCACCTTGGACATGCAGTCGGGTATTATCCATGCAGCAGAAGAGAAGGACTGGAAAACTGCGTACTCA
TACTTCTATGAGGCATTTGAGGGTTATGACTCCATCGACAGCCCCAAGGCCATCACATCTCTGAAGTACATGTTGCTGTGCAAAATCATGCTCAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGG
GAAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAAGCATTAAAATGCGTGGCTCAGGCTAGCAAGAACAGATCACTGGCAGATTTTGAAAAGGCTCTGACAGATTACCGGGCAGAGCTCCGGGATG
ACCCAATCATCAGCACACACTTGGCCAAGTTGTATGATAACTTACTAGAACAGAATCTGATCCGAGTCATTGAGCCTTTTTCCAGAGTACAGATTGAACACATATCTAGTCTCATCAAACTCTCCAAG
GCCGACGTGGAAAGGAAATTATCACAGATGATTCTTGACAAGAAATTTCATGGGATTTTGGACCAGGGGGAGGGTGTCCTGATTATTTTCGATGAACCCCCAGTAGATAAAACTTACGAAGCTGCTCT
GGAAACAATTCAGAACATGAGCAAAGTAGTGGATTCCCTCTACAACAAAGCCAAGAAACTGACATAGAGTTGGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAAACCTTGGGGGA
AAATGCTAGGAGATTCTTTTTTCTTTTTGTTCTACTTTTCGCTCGGAAAGTTTTTAAATCCTCATTTGGTGCATCTGTATTCCAGCCAATAGGTGTGCCAGTTTTCATGTAATCTTTACTGGCCCAAC
TTGGGAGTGGGGAAATTGCTTAAAAAAAAAGAAAAAGAAAAAAAAAAAGATTATTCTAAATAAAAGGAAAAAGGCTTACACTACCTAAAGCTGTGCTCTCTGCCTCCTGGGAGAGGGCCGCAAAGCCA
GGCACCCCGCCAACCACTGGGGGTCCTAATCCACCTGCTGGGCATCACCTCTCCTCCTCCTCAGAATTGGGTGTTTGCTGACCATCAAAAGCAATGACTTTTTATTCTGTTTGTACTGAACCAAAACA
AACAACTGTGTATAGACTGCTGTTTTCTTTTTTATTTGAAATGAGGCATTTTGGTGTTCTTTCCCCTACCATACGGCCTGTCTGCCCTTCCCTCCCCACATTGGCTCCAGCAGAGTAGCCGAAGGTCC
TGCCGCCGCCGCCACCACCACCACCACTGCAGCAACAACAGCAGCAGCAGCAGCAGCGCCTGCATAGCTCCACTCTGACCTGTGAAGGAATGGGGATGAGGCCAGGAGCTAGTGTCTACCACGGCCAC
ACAGGGAGCAGTGTGGGCCCTTAGCCCCCAAGGGGCCTGCTATGCATGTGGCTTTTTTTTTTTTTTTAAACACAGTAAACTAGATTAGTCGTCAGTGTTTTAATTGCCCCTCTTCTCCTCTCCTGCAT
TCCTCTCCTCTCTTCTTTCCTCTCTGTCCCTTCTCTTTCCCCTCTCAACCAGGAGACCATCATGTCTCTCTGCCTTCCTCCTCTCCCCTCCAGGGGAGTCAGGCTGTCTGTGAAAGCCATGAGCTTCT
CTCCCTCTCCCACTCCTCCTCTCCTACTTTCAGATGGATTTATTCCTTTTTTAAACAATGAACATCGGAAATGAGACTGTGGGGTGTGGTTTCTCTCTCTCTTTTTTTTTTAATTTTCTTTGTTGGGT
TTTTGAGCAACCTCATGTCCCCTTCCCAGGGAGCTTTTTAATTTACCTCTTAGAACTCAAGTGGATGGGAAGTAGAGCACTATGTGTCAGTATGCTTTGTTTTCTGACACGATTACACAGCGAGGCTT
TAATGCCATTTGGGTAGGTGAGCTTCTGCACTTCTGTTGTGCTGAACTGTATTTTCTTCTCTCATCTCCTCTTTGTCTTTTTCTCTTTTCCTCTCCTTCCTGCCTTCTTCTGCTGGCCTCCTTTTCTC
TTTCTTTACCTTCCTTGGATTATCCTTCCAGGTTTTCATAATAAATTTATATTTTGTAAAAGGATTTTGTTGTACCAGGTTTTGCATCCTCACTGAATCTGACTGGCTTTTATTTTCCTCTCCAAAAT
CAGGTTTTTGTTCTCAACATCTTTCCCCATCATGTCTAGTCACTGTTTTGGTTTTGGCACCATCAGTATCAAATGTACAAACGGTTCTTGCTAACCAACACCAGGTATATCTGATGTTCAGATGAGTT
CCAATAAAAATAATTTTTTTTTTTTTCAAAAGGTGTCTTTTTCTTGAGTGCTGGAGGGCTTCCAAGCAAGTCCAGACAGCTCTGTGTGGCCCCACACTAGTCTAGCTCTCATCTGGCCAAAGCTGTTA
TCTCATTTGTGTAATGGGAGTCCTTAAGGTAAATTTGGGGTCCAAACTTGGAGGGCTTTGGGGGCAAGAAAGTTGGTGTGTGAGTTCTGAGGTTGGAAATGAGTTCAGGTGTCTTCTTCCAGGGCAGC
ATGGTCCAGTGAGCACATGTAAGTTTGGGCAGTAGATCCTCTGAGCCTACTTTCTCTTCTACTCAGTGAGGATGCTGCTTCCTTGGCAGGTGATTGTGATGTGAAGCTTAGTAAGTCATAGACGTGCA
GGTGTCTGGAGAGTCCTGACATGCAGTTGTGGTTTCGTTTCCTTTTGGAATCTTCAAAGGCAGCGATTTTCATATTGCCTCACACCCTGGCGGGGGCGGGGGGCTCTGGGACCACTGGGGGACCTGCT
AAATCCTCTTCAGTCTGAGCAGTTCAGCCATTGTCAGTTTTAGTATTGTGTCTCTGTATTTCACTTGCAGAAAGAGCTTTGCTTCTATAAAGGACTTTAAAAAGTACTCCAAAGAGATCTAGTTTTGG
AGTAGAGGGGAGATGTTTTCTCAAACTTAGGGCAGTCCTGAGATGCTCAGGCAGTAGCCCTTTTCTCAGTTCCCTTTGCGGGTCTTGGTCAGATGATGCCCTCTAGACCCGTGCTGTCCAATATGTAG
CCGCTAGCCATGTGCAGCTGTCAGGCCCTTGCAACGTGGCTGGTTCGAGCTGTGATACACTGCAAGTGTAAACACAAACCAGACTTCGAAGGCTTAGTATGATAACAAAAGAAAAGGAGTGTAAAATA
TGTCAATAACTTTTTTATATATGTGTTGAAATATTTTGGGTATTGGGTTAAATAAAATATATTATTAAAATTCA

hide sequence


Protein RefSeqs	NP_001257411	(Get FASTA)	NCBI Sequence Viewer
	NP_002806	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB58732	(Get FASTA)	NCBI Sequence Viewer
	AAH00437	(Get FASTA)	NCBI Sequence Viewer
	AAH04430	(Get FASTA)	NCBI Sequence Viewer
	BAA19748	(Get FASTA)	NCBI Sequence Viewer
	BAD96916	(Get FASTA)	NCBI Sequence Viewer
	BAF83291	(Get FASTA)	NCBI Sequence Viewer
	BAG62087	(Get FASTA)	NCBI Sequence Viewer
	EAW80229	(Get FASTA)	NCBI Sequence Viewer
	EAW80230	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000261712
	ENSP00000261712.3
	ENSP00000393185
	ENSP00000393185.2
	ENSP00000497128.1
GenBank Protein	O00231	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_002806 ⟸ NM_002815

- UniProtKB:

O00495 (UniProtKB/Swiss-Prot), E1P663 (UniProtKB/Swiss-Prot), A8K3I7 (UniProtKB/Swiss-Prot), Q53FT5 (UniProtKB/Swiss-Prot), O00231 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQA
LEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLL
CKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGV
LIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT

hide sequence

RefSeq Acc Id:

NP_001257411 ⟸ NM_001270482

- UniProtKB:

O00495 (UniProtKB/Swiss-Prot), E1P663 (UniProtKB/Swiss-Prot), A8K3I7 (UniProtKB/Swiss-Prot), Q53FT5 (UniProtKB/Swiss-Prot), O00231 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAA
ELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTS
ARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIIS
THLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT

hide sequence

Ensembl Acc Id:

ENSP00000463728 ⟸ ENST00000580904

Ensembl Acc Id:

ENSP00000497128 ⟸ ENST00000649012

Ensembl Acc Id:

ENSP00000464475 ⟸ ENST00000584340

Protein Domains

26S proteasome regulatory subunit Rpn6 N-terminal PCI

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O00231-F1-model_v2	AlphaFold	O00231	1-422	view protein structure

RGD ID:

6794458

Promoter ID:

HG_KWN:25730

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

OTTHUMT00000256252, OTTHUMT00000256256, UC010CTA.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	17	27,795,306 - 27,795,806 (+)	MPROMDB

RGD ID:

6851968

Promoter ID:

EP73790

Type:

multiple initiation site

Name:

HS_PSMD11

Description:

Proteasome (prosome, macropain) 26S subunit, non-ATPase, 11.

SO ACC ID:

SO:0000170

Source:

EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

NEDO full length human cDNA sequencing project.; Oligo-capping

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	17	27,795,636 - 27,795,696	EPD

RGD ID:

7234565

Promoter ID:

EPDNEW_H23028

Type:

initiation region

Name:

PSMD11_1

Description:

proteasome 26S subunit, non-ATPase 11

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	32,444,510 - 32,444,570	EPDNEW

Database	Acc Id	Source(s)
COSMIC	PSMD11	COSMIC
Ensembl Genes	ENSG00000108671	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000261712	ENTREZGENE
	ENST00000261712.8	UniProtKB/Swiss-Prot
	ENST00000457654	ENTREZGENE
	ENST00000457654.6	UniProtKB/Swiss-Prot
	ENST00000649012.1	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.40.570	UniProtKB/Swiss-Prot
GTEx	ENSG00000108671	GTEx
HGNC ID	HGNC:9556	ENTREZGENE
Human Proteome Map	PSMD11	Human Proteome Map
InterPro	26S_Proteasome/COP9_Components	UniProtKB/Swiss-Prot
	PCI_dom	UniProtKB/Swiss-Prot
	Rpn6_C_helix	UniProtKB/Swiss-Prot
	Rpn6_N	UniProtKB/Swiss-Prot
	TPR-like_helical_dom_sf	UniProtKB/Swiss-Prot
	WH_DNA-bd_sf	UniProtKB/Swiss-Prot
KEGG Report	hsa:5717	UniProtKB/Swiss-Prot
NCBI Gene	5717	ENTREZGENE
OMIM	604449	OMIM
PANTHER	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2	UniProtKB/Swiss-Prot
Pfam	PCI	UniProtKB/Swiss-Prot
	RPN6_C_helix	UniProtKB/Swiss-Prot
	RPN6_N	UniProtKB/Swiss-Prot
PharmGKB	PA33902	PharmGKB
PROSITE	PCI	UniProtKB/Swiss-Prot
SMART	PAM	UniProtKB/Swiss-Prot
	PINT	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF46785	UniProtKB/Swiss-Prot
	SSF48452	UniProtKB/Swiss-Prot
UniProt	A8K3I7	ENTREZGENE
	E1P663	ENTREZGENE
	J3KSW3_HUMAN	UniProtKB/TrEMBL
	J3QRY4_HUMAN	UniProtKB/TrEMBL
	J3QS13_HUMAN	UniProtKB/TrEMBL
	O00231	ENTREZGENE
	O00495	ENTREZGENE
	PSD11_HUMAN	UniProtKB/Swiss-Prot
	Q53FT5	ENTREZGENE
UniProt Secondary	A8K3I7	UniProtKB/Swiss-Prot
	E1P663	UniProtKB/Swiss-Prot
	O00495	UniProtKB/Swiss-Prot
	Q53FT5	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-18	PSMD11	proteasome 26S subunit, non-ATPase 11		proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)