Tex2 (testis expressed gene 2) - Rat Genome Database

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Gene: Tex2 (testis expressed gene 2) Mus musculus
Analyze
Symbol: Tex2
Name: testis expressed gene 2
RGD ID: 1312952
MGI Page MGI
Description: Predicted to enable lipid binding activity. Predicted to be involved in lipid transport. Predicted to be located in endoplasmic reticulum membrane and nuclear membrane. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including alimentary system; genitourinary system; hemolymphoid system; nervous system; and respiratory system. Orthologous to human TEX2 (testis expressed 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4930568E07Rik; AI553404; Def-5; Taz; Taz4; testis-expressed protein 2; testis-expressed sequence 2 protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911106,392,965 - 106,504,259 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11106,392,973 - 106,504,249 (-)EnsemblGRCm39 Ensembl
GRCm3811106,502,139 - 106,613,433 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,502,147 - 106,613,423 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711106,363,453 - 106,474,244 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611106,318,229 - 106,429,020 (-)NCBIMGSCv36mm8
Celera11118,233,526 - 118,344,699 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1169.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8088835   PMID:8889548   PMID:9600738   PMID:10349636   PMID:10460589   PMID:10512203   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002  
PMID:12904583   PMID:14610273   PMID:15782199   PMID:15840001   PMID:16141072   PMID:16141073   PMID:17114649   PMID:18799693   PMID:21267068   PMID:21873635   PMID:24194600   PMID:31040226  
PMID:32325033   PMID:32554809   PMID:36417873   PMID:38355793  


Genomics

Comparative Map Data
Tex2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911106,392,965 - 106,504,259 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11106,392,973 - 106,504,249 (-)EnsemblGRCm39 Ensembl
GRCm3811106,502,139 - 106,613,433 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,502,147 - 106,613,423 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711106,363,453 - 106,474,244 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611106,318,229 - 106,429,020 (-)NCBIMGSCv36mm8
Celera11118,233,526 - 118,344,699 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1169.46NCBI
TEX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381764,147,227 - 64,263,260 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1764,147,227 - 64,263,260 (-)EnsemblGRCh38hg38GRCh38
GRCh371762,224,587 - 62,340,620 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361759,578,527 - 59,694,385 (-)NCBINCBI36Build 36hg18NCBI36
Celera1756,612,865 - 56,728,752 (-)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1757,594,357 - 57,661,181 (-)NCBIHuRef
CHM1_11762,289,265 - 62,405,067 (-)NCBICHM1_1
T2T-CHM13v2.01765,016,989 - 65,133,047 (-)NCBIT2T-CHM13v2.0
Tex2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81091,936,390 - 92,046,360 (-)NCBIGRCr8
mRatBN7.21091,436,629 - 91,546,240 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1091,436,694 - 91,546,270 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01094,697,962 - 94,807,544 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1094,697,016 - 94,807,499 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01094,445,950 - 94,555,519 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,938,743 - 96,002,144 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11095,905,940 - 96,015,250 (+)NCBI
Celera1090,109,290 - 90,217,866 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Tex2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554787,616,196 - 7,691,871 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554787,616,196 - 7,689,136 (+)NCBIChiLan1.0ChiLan1.0
TEX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21980,331,559 - 80,450,100 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11785,151,844 - 85,267,747 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01758,242,265 - 58,358,154 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11763,336,296 - 63,452,677 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1763,336,296 - 63,419,494 (-)Ensemblpanpan1.1panPan2
TEX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1912,024,134 - 12,124,759 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl912,025,666 - 12,082,477 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha912,920,574 - 13,022,327 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0913,687,080 - 13,788,841 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl913,687,083 - 13,788,833 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1912,633,814 - 12,735,329 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0914,797,523 - 14,898,481 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0914,799,104 - 14,900,649 (+)NCBIUU_Cfam_GSD_1.0
Tex2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560214,335,387 - 14,471,831 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365414,722,329 - 4,789,564 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365414,722,767 - 4,789,514 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TEX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1214,764,508 - 14,869,217 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11214,764,454 - 14,866,779 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21214,758,851 - 14,861,340 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TEX2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11657,014,054 - 57,127,351 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1657,014,123 - 57,128,821 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607727,625,560 - 27,738,995 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tex2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248491,648,988 - 1,710,580 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tex2
3251 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:940
Count of miRNA genes:603
Interacting mature miRNAs:709
Transcripts:ENSMUST00000042780, ENSMUST00000103070, ENSMUST00000128933, ENSMUST00000153870
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101022590121973369Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196176465108806384Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1196897693110603991Mouse
4141612Cia40_mcollagen induced arthritis 40 (mouse)Not determined11103273992115021444Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100254186120887165Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
1300957Pbd1_mpeak bone density 1 (mouse)Not determined11102344123112384123Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
14700693Ppiq12_mprepulse inhibition QTL 12 (mouse)11101504820114472363Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
14700694Ppiq13_mprepulse inhibition QTL 13 (mouse)11101504820114472363Mouse
14700695Ppiq14_mprepulse inhibition QTL 14 (mouse)11101504820114472363Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
14700696Ppiq15_mprepulse inhibition QTL 15 (mouse)11101504820114472363Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100058103121973369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse

Markers in Region
AI553404  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811106,502,299 - 106,502,445UniSTSGRCm38
MGSCv3711106,363,613 - 106,363,759UniSTSGRCm37
Celera11118,233,686 - 118,233,832UniSTS
Cytogenetic Map11DUniSTS
cM Map1161.0UniSTS
Whitehead/MRC_RH111436.06UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_198292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK009520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL663053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY667615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB594125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X96704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X99253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000042780   ⟹   ENSMUSP00000041985
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,392,973 - 106,503,756 (-)Ensembl
GRCm38.p6 Ensembl11106,502,147 - 106,612,930 (-)Ensembl
Ensembl Acc Id: ENSMUST00000103070   ⟹   ENSMUSP00000099359
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,434,884 - 106,469,939 (-)Ensembl
GRCm38.p6 Ensembl11106,544,058 - 106,579,113 (-)Ensembl
Ensembl Acc Id: ENSMUST00000128933   ⟹   ENSMUSP00000120781
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,458,924 - 106,504,249 (-)Ensembl
GRCm38.p6 Ensembl11106,568,098 - 106,613,423 (-)Ensembl
Ensembl Acc Id: ENSMUST00000153870   ⟹   ENSMUSP00000119568
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,459,309 - 106,471,426 (-)Ensembl
GRCm38.p6 Ensembl11106,568,483 - 106,580,600 (-)Ensembl
Ensembl Acc Id: ENSMUST00000207249   ⟹   ENSMUSP00000146465
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11106,393,219 - 106,457,936 (-)Ensembl
GRCm38.p6 Ensembl11106,502,393 - 106,567,110 (-)Ensembl
RefSeq Acc Id: NM_198292   ⟹   NP_938034
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,392,965 - 106,503,756 (-)NCBI
GRCm3811106,502,139 - 106,612,930 (-)NCBI
MGSCv3711106,363,453 - 106,474,244 (-)RGD
Celera11118,233,526 - 118,344,699 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533143   ⟹   XP_006533206
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,469,992 (-)NCBI
GRCm3811106,502,336 - 106,579,171 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533144   ⟹   XP_006533207
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,471,339 (-)NCBI
GRCm3811106,502,336 - 106,580,513 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533145   ⟹   XP_006533208
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,504,259 (-)NCBI
GRCm3811106,502,336 - 106,613,433 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533146   ⟹   XP_006533209
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,503,904 (-)NCBI
GRCm3811106,502,336 - 106,613,018 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533147   ⟹   XP_006533210
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,471,341 (-)NCBI
GRCm3811106,502,336 - 106,580,515 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533148   ⟹   XP_006533211
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,503,862 (-)NCBI
GRCm3811106,502,336 - 106,613,002 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156621   ⟹   XP_036012514
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,503,844 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156622   ⟹   XP_036012515
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,503,904 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156623   ⟹   XP_036012516
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911106,393,162 - 106,504,259 (-)NCBI
Sequence:
RefSeq Acc Id: NP_938034   ⟸   NM_198292
- UniProtKB: B1ATR1 (UniProtKB/Swiss-Prot),   Q6ZPJ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533208   ⟸   XM_006533145
- Peptide Label: isoform X1
- UniProtKB: B1ATR1 (UniProtKB/Swiss-Prot),   Q6ZPJ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533211   ⟸   XM_006533148
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006533209   ⟸   XM_006533146
- Peptide Label: isoform X1
- UniProtKB: B1ATR1 (UniProtKB/Swiss-Prot),   Q6ZPJ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533210   ⟸   XM_006533147
- Peptide Label: isoform X1
- UniProtKB: B1ATR1 (UniProtKB/Swiss-Prot),   Q6ZPJ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533207   ⟸   XM_006533144
- Peptide Label: isoform X1
- UniProtKB: B1ATR1 (UniProtKB/Swiss-Prot),   Q6ZPJ0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006533206   ⟸   XM_006533143
- Peptide Label: isoform X1
- UniProtKB: B1ATR1 (UniProtKB/Swiss-Prot),   Q6ZPJ0 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000041985   ⟸   ENSMUST00000042780
Ensembl Acc Id: ENSMUSP00000146465   ⟸   ENSMUST00000207249
Ensembl Acc Id: ENSMUSP00000120781   ⟸   ENSMUST00000128933
Ensembl Acc Id: ENSMUSP00000119568   ⟸   ENSMUST00000153870
Ensembl Acc Id: ENSMUSP00000099359   ⟸   ENSMUST00000103070
RefSeq Acc Id: XP_036012516   ⟸   XM_036156623
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012515   ⟸   XM_036156622
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036012514   ⟸   XM_036156621
- Peptide Label: isoform X1
- UniProtKB: Q6ZPJ0 (UniProtKB/Swiss-Prot),   B1ATR1 (UniProtKB/Swiss-Prot)
Protein Domains
SMP-LTD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6ZPJ0-F1-model_v2 AlphaFold Q6ZPJ0 1-1128 view protein structure

Promoters
RGD ID:6822302
Promoter ID:MM_KWN:10252
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Spleen
Transcripts:UC007LZB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611106,430,614 - 106,431,114 (-)MPROMDB
RGD ID:6822300
Promoter ID:MM_KWN:10254
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   Liver
Transcripts:OTTMUST00000007198
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611106,441,876 - 106,442,376 (-)MPROMDB
RGD ID:6822299
Promoter ID:MM_KWN:10255
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:NM_198292,   OTTMUST00000007197
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3611106,474,191 - 106,474,757 (-)MPROMDB
RGD ID:8677100
Promoter ID:EPDNEW_M16578
Type:initiation region
Name:Tex2_2
Description:Mus musculus testis expressed gene 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16579  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811106,579,120 - 106,579,180EPDNEW
RGD ID:8677096
Promoter ID:EPDNEW_M16579
Type:initiation region
Name:Tex2_1
Description:Mus musculus testis expressed gene 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M16578  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811106,612,967 - 106,613,027EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:102465 AgrOrtholog
Ensembl Genes ENSMUSG00000040548 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000042780 ENTREZGENE
  ENSMUST00000042780.14 UniProtKB/Swiss-Prot
  ENSMUST00000103070.3 UniProtKB/TrEMBL
  ENSMUST00000128933.2 UniProtKB/TrEMBL
  ENSMUST00000153870.2 UniProtKB/TrEMBL
  ENSMUST00000207249.2 UniProtKB/TrEMBL
InterPro SMP_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:21763 UniProtKB/Swiss-Prot
MGD MGI:102465 ENTREZGENE
NCBI Gene 21763 ENTREZGENE
PANTHER TESTIS-EXPRESSED PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TEX2 PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tex2 PhenoGen
PROSITE SMP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LHL8_MOUSE UniProtKB/TrEMBL
  B1ATR1 ENTREZGENE
  B1ATR2_MOUSE UniProtKB/TrEMBL
  B1ATR3_MOUSE UniProtKB/TrEMBL
  B1ATR4_MOUSE UniProtKB/TrEMBL
  Q3TVA4_MOUSE UniProtKB/TrEMBL
  Q6PFV2_MOUSE UniProtKB/TrEMBL
  Q6ZPJ0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B1ATR1 UniProtKB/Swiss-Prot