Zfp775 (zinc finger protein 775) - Rat Genome Database

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Gene: Zfp775 (zinc finger protein 775) Mus musculus
Analyze
Symbol: Zfp775
Name: zinc finger protein 775
RGD ID: 1312621
MGI Page MGI
Description: Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Is expressed in several structures, including 1st branchial arch; early conceptus; eye; maxillary process; and oocyte. Orthologous to human ZNF775 (zinc finger protein 775).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C130032F08Rik; Znf775
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39648,578,937 - 48,598,482 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl648,578,997 - 48,600,161 (+)EnsemblGRCm39 Ensembl
GRCm38648,602,007 - 48,621,548 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl648,602,063 - 48,623,227 (+)EnsemblGRCm38mm10GRCm38
MGSCv37648,563,179 - 48,573,226 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36648,542,766 - 48,552,813 (+)NCBIMGSCv36mm8
Celera649,124,133 - 49,134,233 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map623.59NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA,IEA)

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15618518   PMID:16141072   PMID:16141073   PMID:18799693   PMID:20059953   PMID:20412781   PMID:21267068  
PMID:21677750   PMID:21873635  


Genomics

Comparative Map Data
Zfp775
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39648,578,937 - 48,598,482 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl648,578,997 - 48,600,161 (+)EnsemblGRCm39 Ensembl
GRCm38648,602,007 - 48,621,548 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl648,602,063 - 48,623,227 (+)EnsemblGRCm38mm10GRCm38
MGSCv37648,563,179 - 48,573,226 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36648,542,766 - 48,552,813 (+)NCBIMGSCv36mm8
Celera649,124,133 - 49,134,233 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map623.59NCBI
ZNF775
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387150,379,330 - 150,398,630 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7150,368,790 - 150,398,630 (+)EnsemblGRCh38hg38GRCh38
GRCh377150,076,419 - 150,095,718 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367149,707,339 - 149,726,652 (+)NCBINCBI36Build 36hg18NCBI36
Celera7144,633,503 - 144,652,813 (+)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,892,736 - 143,911,608 (+)NCBIHuRef
CHM1_17150,083,232 - 150,104,110 (+)NCBICHM1_1
T2T-CHM13v2.07151,557,672 - 151,576,951 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27149,414,255 - 149,433,562 (+)NCBI
Zfp775
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8478,887,940 - 78,906,196 (+)NCBIGRCr8
mRatBN7.2477,557,037 - 77,575,296 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl477,548,847 - 77,575,296 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx482,764,568 - 82,782,764 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0478,540,067 - 78,558,275 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0476,980,348 - 76,998,550 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0478,240,326 - 78,258,545 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl478,240,385 - 78,258,545 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04142,904,020 - 142,922,229 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4476,694,083 - 76,723,391 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1476,978,247 - 76,986,903 (+)NCBI
Celera472,494,616 - 72,512,608 (+)NCBICelera
Cytogenetic Map4q24NCBI
Znf775
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554914,980,700 - 4,996,919 (+)NCBIChiLan1.0ChiLan1.0
LOC100984200
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,826,573 - 186,858,271 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,858,410 - 38,868,535 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07142,020,408 - 142,028,510 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17154,156,936 - 154,181,358 (+)NCBIpanpan1.1PanPan1.1panPan2
ZNF775
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,694,305 - 14,711,773 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1615,293,488 - 15,321,167 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01616,399,731 - 16,426,867 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1616,425,233 - 16,426,822 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,779,800 - 14,807,455 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01615,370,214 - 15,387,791 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,411,246 - 15,439,136 (+)NCBIUU_Cfam_GSD_1.0
Znf775
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051186,902,275 - 6,921,618 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365275,982,281 - 6,001,154 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF775
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11855,932,337 - 55,954,153 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF775
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121118,522,634 - 118,542,687 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607214,482,875 - 14,502,366 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf775
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248006,094,068 - 6,115,215 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:966
Count of miRNA genes:515
Interacting mature miRNAs:628
Transcripts:ENSMUST00000061720
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64209335876093500Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1771159851711719Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64380374777788506Mouse
11252142Mom12_mModifier of Min 12 (mouse)63387226167872400Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64380374777788506Mouse
1300767Aliq4_macute lung injury QTL 4 (mouse)Not determined63627333270273435Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
14746995Manh60_mmandible shape 60 (mouse)63720266271202662Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64380374777788506Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414773364675Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64380374777788506Mouse
4141094Hrtr1_mheart rate 1 (mouse)Not determined3674146370741463Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64529099387403016Mouse
4141988Obrq3_mobesity resistance QTL 3 (mouse)Not determined2829099362291115Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64380374777788506Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64380374777788506Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61961634653616346Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61961634653616346Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268571299759Mouse
4141454Obrq4_mobesity resistance QTL 4 (mouse)Not determined3170349965703611Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61961634653616346Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62499999979976983Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61771159851711719Mouse
1300959Lxw2_mlupus BXSB x NZW 2 (mouse)Not determined63387226167872400Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61771159851711719Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62004983054049830Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
1301326Trbv4c2_mT cell receptor beta variable 4 (mouse)Not determined64086823071356155Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63864656092584431Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3282758578215957Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64157698575576985Mouse
12880425V25Dq5_mvitamin D inactive form serum level QTL 5 (mouse)63267698066676980Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64209335876093500Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64209335876093500Mouse
14700690Ccs6_mcolon cancer susceptibility 6 (mouse)62377693457776934Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64209335876093500Mouse
10043885Cia6c_mcollagen induced arthritis QTL 6c (mouse)Not determined64444280571096451Mouse
1357539Bsbob3_mBSB obesity 3 (mouse)Not determined63644845670448576Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61769999953476985Mouse

Markers in Region
BB283937  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38648,621,205 - 48,621,327UniSTSGRCm38
MGSCv37648,571,204 - 48,571,326UniSTSGRCm37
Celera649,132,174 - 49,132,296UniSTS
Cytogenetic Map6B2.3UniSTS
Whitehead/MRC_RH6451.58UniSTS
UniSTS:235440  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38648,620,898 - 48,621,113UniSTSGRCm38
MGSCv37648,570,897 - 48,571,112UniSTSGRCm37
Celera649,131,867 - 49,132,082UniSTS
Cytogenetic Map6B2.3UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000061720   ⟹   ENSMUSP00000056290
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl648,590,114 - 48,600,161 (+)Ensembl
GRCm38.p6 Ensembl648,613,180 - 48,623,227 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204042   ⟹   ENSMUSP00000145369
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl648,582,472 - 48,596,676 (+)Ensembl
GRCm38.p6 Ensembl648,605,538 - 48,619,742 (+)Ensembl
Ensembl Acc Id: ENSMUST00000204095   ⟹   ENSMUSP00000145192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl648,578,997 - 48,600,161 (+)Ensembl
GRCm38.p6 Ensembl648,602,063 - 48,623,227 (+)Ensembl
RefSeq Acc Id: NM_173429   ⟹   NP_775605
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39648,578,941 - 48,598,482 (+)NCBI
GRCm38648,602,007 - 48,621,548 (+)NCBI
MGSCv37648,563,179 - 48,573,226 (+)RGD
Celera649,124,133 - 49,134,233 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036166110   ⟹   XP_036022003
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39648,578,937 - 48,598,482 (+)NCBI
Sequence:
RefSeq Acc Id: NP_775605   ⟸   NM_173429
- UniProtKB: Q8BI73 (UniProtKB/Swiss-Prot),   B9EIX7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000145369   ⟸   ENSMUST00000204042
Ensembl Acc Id: ENSMUSP00000145192   ⟸   ENSMUST00000204095
Ensembl Acc Id: ENSMUSP00000056290   ⟸   ENSMUST00000061720
RefSeq Acc Id: XP_036022003   ⟸   XM_036166110
- Peptide Label: isoform X1
- UniProtKB: B9EIX7 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BI73-F1-model_v2 AlphaFold Q8BI73 1-538 view protein structure

Promoters
RGD ID:6840195
Promoter ID:MM_KWN:45915
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:UC009BVC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36648,562,241 - 48,562,741 (+)MPROMDB
RGD ID:6889618
Promoter ID:EPDNEW_M8260
Type:single initiation site
Name:Zfp775_1
Description:Mus musculus zinc finger protein 775 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38648,605,536 - 48,605,596EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2683557 AgrOrtholog
Ensembl Genes ENSMUSG00000007216 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000061720.5 UniProtKB/Swiss-Prot
  ENSMUST00000204042.2 UniProtKB/TrEMBL
  ENSMUST00000204095 ENTREZGENE
  ENSMUST00000204095.3 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C2H2-ZF_domain-containing UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:243372 UniProtKB/Swiss-Prot
MGD MGI:2683557 ENTREZGENE
NCBI Gene 243372 ENTREZGENE
PANTHER KRUEPPEL-LIKE TRANSCRIPTION FACTOR UniProtKB/TrEMBL
  REDUCED EXPRESSION 2-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 2-LIKE-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 200 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Zfp775 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SW47_MOUSE UniProtKB/TrEMBL
  B9EIX7 ENTREZGENE, UniProtKB/TrEMBL
  Q8BI73 ENTREZGENE, UniProtKB/Swiss-Prot