Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ift43 (intraflagellar transport 43) Rattus norvegicus
Analyze
Symbol: Ift43
Name: intraflagellar transport 43
Description: Predicted to be involved in cilium assembly and intraciliary retrograde transport. Predicted to localize to the centriolar satellite; cilium; and intraciliary transport particle A. Human ortholog(s) of this gene implicated in Sensenbrenner syndrome; retinitis pigmentosa 81; and short-rib thoracic dysplasia 18 with polydactyly. Orthologous to human IFT43 (intraflagellar transport 43); INTERACTS WITH (RS)-amphetamine; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC299209; intraflagellar transport 43 homolog; intraflagellar transport 43 homolog (Chlamydomonas); intraflagellar transport protein 43 homolog; LOC299209; RGD1307392; similar to 1700019E19Rik protein
Orthologs:
Homo sapiens (human) : IFT43 (intraflagellar transport 43)  HGNC  Alliance
Mus musculus (house mouse) : Ift43 (intraflagellar transport 43)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift43 (intraflagellar transport 43)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT43 (intraflagellar transport 43)
Canis lupus familiaris (dog) : IFT43 (intraflagellar transport 43)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift43 (intraflagellar transport 43)
Sus scrofa (pig) : IFT43 (intraflagellar transport 43)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06109,939,323 - 110,016,646 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6109,939,345 - 110,016,644 (+)Ensembl
Rnor_5.06119,247,640 - 119,323,933 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46110,199,027 - 110,276,696 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16110,199,475 - 110,280,229 (+)NCBI
Celera6103,556,375 - 103,632,887 (+)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ift43
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307392
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.