LOC106145014 (dimethyladenosine transferase 2, mitochondrial-like) - Rat Genome Database

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Gene: LOC106145014 (dimethyladenosine transferase 2, mitochondrial-like) Ictidomys tridecemlineatus
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Symbol: LOC106145014
Name: dimethyladenosine transferase 2, mitochondrial-like
RGD ID: 12712171
Description: ENCODES a protein that exhibits methyltransferase activity (inferred); mitochondrial transcription factor activity (inferred); RNA binding (inferred); INVOLVED IN methylation (inferred); mitochondrial transcription (inferred); rRNA methylation (inferred); FOUND IN mitochondrial matrix (inferred); mitochondrial nucleoid (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dimethyladenosine transferase 2, mitochondrial pseudogene
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934463,295,535 - 63,297,158 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936557535,700 - 537,051 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_040278430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010004404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_040278430   ⟹   XP_040134364
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934463,295,535 - 63,297,158 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040134364 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000029112.1
Reference Protein Sequences
RefSeq Acc Id: XP_040134364   ⟸   XM_040278430
- UniProtKB: A0A287D6A4 (UniProtKB/TrEMBL)
Protein Domains
Ribosomal RNA adenine methylase transferase N-


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000034162 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000042189.1 UniProtKB/TrEMBL
Gene3D-CATH Vaccinia Virus protein VP39 UniProtKB/TrEMBL
InterPro KsgA/Erm UniProtKB/TrEMBL
  rRNA_Ade_methylase_Trfase_N UniProtKB/TrEMBL
  SAM-dependent_MTases_sf UniProtKB/TrEMBL
NCBI Gene LOC106145014 ENTREZGENE
PANTHER DIMETHYLADENOSINE TRANSFERASE UniProtKB/TrEMBL
  DIMETHYLADENOSINE TRANSFERASE 2, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam RrnaAD UniProtKB/TrEMBL
PIRSF MtTFB2 UniProtKB/TrEMBL
PROSITE SAM_RNA_A_N6_MT UniProtKB/TrEMBL
SMART rADc UniProtKB/TrEMBL
Superfamily-SCOP S-adenosyl-L-methionine-dependent methyltransferases UniProtKB/TrEMBL
UniProt A0A287D6A4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC106145014  dimethyladenosine transferase 2, mitochondrial-like  LOC106145014  dimethyladenosine transferase 2, mitochondrial pseudogene  Symbol and/or name change 5135510 APPROVED