LOC101972345 (growth arrest-specific protein 7-like) - Rat Genome Database

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Gene: LOC101972345 (growth arrest-specific protein 7-like) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101972345
Name: growth arrest-specific protein 7-like
RGD ID: 12677856
Description: ENCODES a protein that exhibits actin filament binding (inferred); INVOLVED IN actin filament polymerization (inferred); neuron projection morphogenesis (inferred); FOUND IN actin filament (inferred); cytoplasm (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: growth arrest-specific protein 7 pseudogene
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X63,413,940 - 63,414,997 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493681360,226 - 61,166 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_040288751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_040288751   ⟹   XP_040144685
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2X63,413,940 - 63,414,997 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040144685 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000029883.1
Reference Protein Sequences
RefSeq Acc Id: XP_040144685   ⟸   XM_040288751
- UniProtKB: A0A287D8L7 (UniProtKB/TrEMBL)
Protein Domains
F-BAR


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000026404 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000027798.2 UniProtKB/TrEMBL
Gene3D-CATH Arfaptin homology (AH) domain/BAR domain UniProtKB/TrEMBL
InterPro AH/BAR_dom_sf UniProtKB/TrEMBL
  F_BAR UniProtKB/TrEMBL
  FCH_dom UniProtKB/TrEMBL
  GAS7_F-BAR UniProtKB/TrEMBL
NCBI Gene LOC101972345 ENTREZGENE
PANTHER GROWTH ARREST-SPECIFIC PROTEIN 7 UniProtKB/TrEMBL
  PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 UniProtKB/TrEMBL
Pfam FCH UniProtKB/TrEMBL
  WW_FCH_linker UniProtKB/TrEMBL
PROSITE F_BAR UniProtKB/TrEMBL
SMART FCH UniProtKB/TrEMBL
Superfamily-SCOP BAR/IMD domain-like UniProtKB/TrEMBL
UniProt A0A287D8L7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC101972345  growth arrest-specific protein 7-like  LOC101972345  growth arrest-specific protein 7 pseudogene  Symbol and/or name change 5135510 APPROVED