Sorbs2 (sorbin and SH3 domain containing 2) - Rat Genome Database

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Gene: Sorbs2 (sorbin and SH3 domain containing 2) Ictidomys tridecemlineatus
Analyze
Symbol: Sorbs2
Name: sorbin and SH3 domain containing 2
RGD ID: 12676864
Description: ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cell growth involved in cardiac muscle cell development (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Herpes Simplex Encephalitis 1 (ortholog); Weight Gain (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sorbin and SH3 domain containing 2, transcript variant X1; sorbin and SH3 domain containing 2, transcript variant X10; sorbin and SH3 domain containing 2, transcript variant X11; sorbin and SH3 domain containing 2, transcript variant X12; sorbin and SH3 domain containing 2, transcript variant X13; sorbin and SH3 domain containing 2, transcript variant X14; sorbin and SH3 domain containing 2, transcript variant X15; sorbin and SH3 domain containing 2, transcript variant X16; sorbin and SH3 domain containing 2, transcript variant X17; sorbin and SH3 domain containing 2, transcript variant X18; sorbin and SH3 domain containing 2, transcript variant X19; sorbin and SH3 domain containing 2, transcript variant X2; sorbin and SH3 domain containing 2, transcript variant X20; sorbin and SH3 domain containing 2, transcript variant X21; sorbin and SH3 domain containing 2, transcript variant X22; sorbin and SH3 domain containing 2, transcript variant X23; sorbin and SH3 domain containing 2, transcript variant X24; sorbin and SH3 domain containing 2, transcript variant X25; sorbin and SH3 domain containing 2, transcript variant X3; sorbin and SH3 domain containing 2, transcript variant X4; sorbin and SH3 domain containing 2, transcript variant X5; sorbin and SH3 domain containing 2, transcript variant X6; sorbin and SH3 domain containing 2, transcript variant X7; sorbin and SH3 domain containing 2, transcript variant X8; sorbin and SH3 domain containing 2, transcript variant X9; sorbin and SH3 domain-containing protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494334,312,658 - 34,634,656 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365543,593,512 - 3,797,555 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365543,593,607 - 3,797,324 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Sorbs2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494334,312,658 - 34,634,656 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365543,593,512 - 3,797,555 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365543,593,607 - 3,797,324 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SORBS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384185,585,523 - 185,956,372 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4185,585,444 - 185,956,652 (-)EnsemblGRCh38hg38GRCh38
GRCh374186,506,677 - 186,877,526 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364186,743,592 - 187,114,516 (-)NCBINCBI36Build 36hg18NCBI36
Build 344186,883,307 - 187,252,671NCBI
Celera4183,831,196 - 184,201,888 (-)NCBICelera
Cytogenetic Map4q35.1NCBI
HuRef4182,259,256 - 182,629,702 (-)NCBIHuRef
CHM1_14186,483,030 - 186,854,309 (-)NCBICHM1_1
T2T-CHM13v2.04188,926,307 - 189,297,353 (-)NCBIT2T-CHM13v2.0
Sorbs2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39845,960,470 - 46,280,943 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl845,960,825 - 46,280,943 (+)EnsemblGRCm39 Ensembl
GRCm38845,507,788 - 45,827,906 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl845,507,788 - 45,827,906 (+)EnsemblGRCm38mm10GRCm38
MGSCv37846,593,149 - 46,913,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36847,006,441 - 47,326,723 (+)NCBIMGSCv36mm8
Celera848,191,097 - 48,511,228 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
cM Map825.44NCBI
Sorbs2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81653,167,795 - 53,481,300 (-)NCBIGRCr8
mRatBN7.21646,435,220 - 46,748,743 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1646,435,237 - 46,626,514 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1651,837,443 - 52,028,439 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01655,206,227 - 55,397,004 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01650,476,834 - 50,667,832 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01649,626,205 - 49,820,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1649,626,205 - 49,820,235 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01649,355,585 - 49,545,430 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41649,722,539 - 49,917,550 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11649,722,613 - 49,917,626 (-)NCBI
Celera1644,432,235 - 44,623,524 (-)NCBICelera
Cytogenetic Map16q11NCBI
Sorbs2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540323,371,143 - 23,503,654 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540323,295,887 - 23,503,654 (+)NCBIChiLan1.0ChiLan1.0
SORBS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23183,323,194 - 183,696,934 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14183,671,541 - 184,046,607 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04177,751,089 - 178,125,937 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14189,965,729 - 190,335,930 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4189,965,729 - 190,070,543 (-)Ensemblpanpan1.1panPan2
SORBS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11644,847,384 - 45,063,218 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1644,717,052 - 45,061,337 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1645,333,197 - 45,548,530 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01647,061,067 - 47,276,497 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1646,931,094 - 47,276,497 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11645,029,526 - 45,244,827 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01645,641,875 - 45,857,362 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01645,773,830 - 45,988,803 (+)NCBIUU_Cfam_GSD_1.0
SORBS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1546,585,602 - 46,795,038 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11546,585,599 - 46,910,679 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21553,377,736 - 53,516,595 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SORBS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17131,522,390 - 131,895,835 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7131,521,298 - 131,749,949 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037111,789,062 - 112,214,360 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sorbs2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476916,436,923 - 16,541,141 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476916,437,631 - 16,835,725 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005329200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013360304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013360305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021729051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040294689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000015257   ⟹   ENSSTOP00000013673
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,703,753 - 3,795,234 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000031307   ⟹   ENSSTOP00000026296
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,734,735 - 3,797,555 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000031382   ⟹   ENSSTOP00000026992
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,703,753 - 3,795,234 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000034568   ⟹   ENSSTOP00000031047
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,593,512 - 3,797,555 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000034947   ⟹   ENSSTOP00000032051
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,703,753 - 3,744,549 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000035992   ⟹   ENSSTOP00000027889
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,703,753 - 3,795,234 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000040542   ⟹   ENSSTOP00000025684
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,703,753 - 3,795,234 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000043155   ⟹   ENSSTOP00000032188
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365543,593,512 - 3,797,555 (+)Ensembl
RefSeq Acc Id: XM_005329200   ⟹   XP_005329257
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,328 (-)NCBI
SpeTri2.0NW_0049365543,593,654 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013360304   ⟹   XP_013215758
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,406,229 (-)NCBI
SpeTri2.0NW_0049365543,593,650 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013360305   ⟹   XP_013215759
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,301 (-)NCBI
SpeTri2.0NW_0049365543,593,654 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729031   ⟹   XP_021584706
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,304 (-)NCBI
SpeTri2.0NW_0049365543,593,629 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729037   ⟹   XP_021584712
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,303 (-)NCBI
SpeTri2.0NW_0049365543,593,631 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729044   ⟹   XP_021584719
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,375,222 (-)NCBI
SpeTri2.0NW_0049365543,734,421 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729047   ⟹   XP_021584722
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,302 (-)NCBI
SpeTri2.0NW_0049365543,593,650 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729048   ⟹   XP_021584723
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,301 (-)NCBI
SpeTri2.0NW_0049365543,593,654 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021729050   ⟹   XP_021584725
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,375,221 (-)NCBI
SpeTri2.0NW_0049365543,734,529 - 3,797,324 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040294538   ⟹   XP_040150472
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294542   ⟹   XP_040150476
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,634,656 (-)NCBI
RefSeq Acc Id: XM_040294544   ⟹   XP_040150478
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294547   ⟹   XP_040150481
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,306 (-)NCBI
RefSeq Acc Id: XM_040294551   ⟹   XP_040150485
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294553   ⟹   XP_040150487
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,306 (-)NCBI
RefSeq Acc Id: XM_040294559   ⟹   XP_040150493
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294561   ⟹   XP_040150495
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,306 (-)NCBI
RefSeq Acc Id: XM_040294563   ⟹   XP_040150497
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294572   ⟹   XP_040150506
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294581   ⟹   XP_040150515
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294582   ⟹   XP_040150516
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294589   ⟹   XP_040150523
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294595   ⟹   XP_040150529
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294598   ⟹   XP_040150532
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,304 (-)NCBI
RefSeq Acc Id: XM_040294602   ⟹   XP_040150536
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,304 (-)NCBI
RefSeq Acc Id: XM_040294606   ⟹   XP_040150540
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,303 (-)NCBI
RefSeq Acc Id: XM_040294607   ⟹   XP_040150541
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,304 (-)NCBI
RefSeq Acc Id: XM_040294615   ⟹   XP_040150549
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,305 (-)NCBI
RefSeq Acc Id: XM_040294621   ⟹   XP_040150555
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,406,229 (-)NCBI
RefSeq Acc Id: XM_040294625   ⟹   XP_040150559
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,483,169 (-)NCBI
RefSeq Acc Id: XM_040294630   ⟹   XP_040150564
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,483,171 (-)NCBI
RefSeq Acc Id: XM_040294641   ⟹   XP_040150575
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,375,218 (-)NCBI
RefSeq Acc Id: XM_040294645   ⟹   XP_040150579
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,375,218 (-)NCBI
RefSeq Acc Id: XM_040294648   ⟹   XP_040150582
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,634,624 (-)NCBI
RefSeq Acc Id: XM_040294656   ⟹   XP_040150590
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,375,100 (-)NCBI
RefSeq Acc Id: XM_040294669   ⟹   XP_040150603
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,302 (-)NCBI
RefSeq Acc Id: XM_040294679   ⟹   XP_040150613
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,516,302 (-)NCBI
RefSeq Acc Id: XM_040294689   ⟹   XP_040150623
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494334,312,658 - 34,406,269 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005329257 (Get FASTA)   NCBI Sequence Viewer  
  XP_013215758 (Get FASTA)   NCBI Sequence Viewer  
  XP_013215759 (Get FASTA)   NCBI Sequence Viewer  
  XP_021584706 (Get FASTA)   NCBI Sequence Viewer  
  XP_021584712 (Get FASTA)   NCBI Sequence Viewer  
  XP_021584719 (Get FASTA)   NCBI Sequence Viewer  
  XP_021584722 (Get FASTA)   NCBI Sequence Viewer  
  XP_021584723 (Get FASTA)   NCBI Sequence Viewer  
  XP_021584725 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150472 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150476 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150478 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150481 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150485 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150487 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150493 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150495 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150497 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150506 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150515 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150516 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150523 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150529 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150532 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150536 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150540 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150541 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150549 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150555 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150559 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150564 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150575 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150579 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150582 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150590 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150603 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150613 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150623 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000013673.3
  ENSSTOP00000025684.1
  ENSSTOP00000026296.1
  ENSSTOP00000026992.1
  ENSSTOP00000027889.1
  ENSSTOP00000031047.1
  ENSSTOP00000032051.1
  ENSSTOP00000032188.1
GenBank Protein KAG3294606 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294607 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294608 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294609 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294610 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294611 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294612 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294613 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294614 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294615 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294616 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294617 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294618 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294619 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294620 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294621 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294622 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294623 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294624 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294625 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294626 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294627 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294628 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294629 (Get FASTA)   NCBI Sequence Viewer  
  KAG3294630 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005329257   ⟸   XM_005329200
- Peptide Label: isoform X32
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013215759   ⟸   XM_013360305
- Peptide Label: isoform X34
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013215758   ⟸   XM_013360304
- Peptide Label: isoform X29
- UniProtKB: A0A287CWP4 (UniProtKB/TrEMBL),   A0A287D2Y3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584706   ⟸   XM_021729031
- Peptide Label: isoform X8
- UniProtKB: A0A287DBV0 (UniProtKB/TrEMBL),   A0A287DF63 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584712   ⟸   XM_021729037
- Peptide Label: isoform X21
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584722   ⟸   XM_021729047
- Peptide Label: isoform X27
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584723   ⟸   XM_021729048
- Peptide Label: isoform X31
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584719   ⟸   XM_021729044
- Peptide Label: isoform X26
- UniProtKB: A0A287CYE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584725   ⟸   XM_021729050
- Peptide Label: isoform X35
- Sequence:
RefSeq Acc Id: XP_040150476   ⟸   XM_040294542
- Peptide Label: isoform X1
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150582   ⟸   XM_040294648
- Peptide Label: isoform X24
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150495   ⟸   XM_040294561
- Peptide Label: isoform X6
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150487   ⟸   XM_040294553
- Peptide Label: isoform X4
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150481   ⟸   XM_040294547
- Peptide Label: isoform X2
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150549   ⟸   XM_040294615
- Peptide Label: isoform X17
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150485   ⟸   XM_040294551
- Peptide Label: isoform X3
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150529   ⟸   XM_040294595
- Peptide Label: isoform X13
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150506   ⟸   XM_040294572
- Peptide Label: isoform X9
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150523   ⟸   XM_040294589
- Peptide Label: isoform X12
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150516   ⟸   XM_040294582
- Peptide Label: isoform X11
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150497   ⟸   XM_040294563
- Peptide Label: isoform X7
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150493   ⟸   XM_040294559
- Peptide Label: isoform X5
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150515   ⟸   XM_040294581
- Peptide Label: isoform X10
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150472   ⟸   XM_040294538
- Peptide Label: isoform X1
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150478   ⟸   XM_040294544
- Peptide Label: isoform X1
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150541   ⟸   XM_040294607
- Peptide Label: isoform X17
- UniProtKB: A0A287DF63 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150536   ⟸   XM_040294602
- Peptide Label: isoform X15
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150532   ⟸   XM_040294598
- Peptide Label: isoform X14
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150540   ⟸   XM_040294606
- Peptide Label: isoform X16
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150613   ⟸   XM_040294679
- Peptide Label: isoform X30
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150603   ⟸   XM_040294669
- Peptide Label: isoform X28
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150564   ⟸   XM_040294630
- Peptide Label: isoform X20
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150559   ⟸   XM_040294625
- Peptide Label: isoform X19
- UniProtKB: I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150623   ⟸   XM_040294689
- Peptide Label: isoform X33
- UniProtKB: A0A287D2Y3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150555   ⟸   XM_040294621
- Peptide Label: isoform X18
- UniProtKB: A0A287D0E3 (UniProtKB/TrEMBL),   I3MPG0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150579   ⟸   XM_040294645
- Peptide Label: isoform X23
- UniProtKB: A0A287CYE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150575   ⟸   XM_040294641
- Peptide Label: isoform X22
- UniProtKB: A0A287CYE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040150590   ⟸   XM_040294656
- Peptide Label: isoform X25
- UniProtKB: A0A287CYE6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSSTOP00000026992   ⟸   ENSSTOT00000031382
Ensembl Acc Id: ENSSTOP00000025684   ⟸   ENSSTOT00000040542
Ensembl Acc Id: ENSSTOP00000013673   ⟸   ENSSTOT00000015257
Ensembl Acc Id: ENSSTOP00000026296   ⟸   ENSSTOT00000031307
Ensembl Acc Id: ENSSTOP00000027889   ⟸   ENSSTOT00000035992
Ensembl Acc Id: ENSSTOP00000031047   ⟸   ENSSTOT00000034568
Ensembl Acc Id: ENSSTOP00000032188   ⟸   ENSSTOT00000043155
Ensembl Acc Id: ENSSTOP00000032051   ⟸   ENSSTOT00000034947
Protein Domains
SH3   SoHo


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000015244 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000015257.3 UniProtKB/TrEMBL
  ENSSTOT00000031307.1 UniProtKB/TrEMBL
  ENSSTOT00000031382.1 UniProtKB/TrEMBL
  ENSSTOT00000034568.1 UniProtKB/TrEMBL
  ENSSTOT00000034947.1 UniProtKB/TrEMBL
  ENSSTOT00000035992.1 UniProtKB/TrEMBL
  ENSSTOT00000040542.1 UniProtKB/TrEMBL
  ENSSTOT00000043155.1 UniProtKB/TrEMBL
Gene3D-CATH SH3 Domains UniProtKB/TrEMBL
InterPro Endophilin_SH3RF UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
  SoHo_dom UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene Sorbs2 ENTREZGENE
PANTHER PTHR14167:SF56 UniProtKB/TrEMBL
  SH3 DOMAIN-CONTAINING UniProtKB/TrEMBL
Pfam SH3_1 UniProtKB/TrEMBL
  SH3_9 UniProtKB/TrEMBL
  Sorb UniProtKB/TrEMBL
PRINTS P67PHOX UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/TrEMBL
PROSITE SH3 UniProtKB/TrEMBL
  SOHO UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
SMART SH3 UniProtKB/TrEMBL
  Sorb UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/TrEMBL
UniProt A0A287CWP4 ENTREZGENE, UniProtKB/TrEMBL
  A0A287CYE6 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D0E3 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D2Y3 ENTREZGENE, UniProtKB/TrEMBL
  A0A287DBV0 ENTREZGENE, UniProtKB/TrEMBL
  A0A287DEV7_ICTTR UniProtKB/TrEMBL
  A0A287DF63 ENTREZGENE, UniProtKB/TrEMBL
  I3MPG0 ENTREZGENE, UniProtKB/TrEMBL