LOC101967666 (peroxiredoxin-2-like) - Rat Genome Database

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Gene: LOC101967666 (peroxiredoxin-2-like) Ictidomys tridecemlineatus
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Symbol: LOC101967666
Name: peroxiredoxin-2-like
RGD ID: 12649611
Description: ENCODES a protein that exhibits peroxidase activity (inferred); peroxiredoxin activity (inferred); thioredoxin peroxidase activity (inferred); INVOLVED IN cell redox homeostasis (inferred); hydrogen peroxide catabolic process (inferred); leukocyte activation (inferred); FOUND IN cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: peroxiredoxin-2 pseudogene
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505867,066,499 - 67,067,365 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365228,348,938 - 8,349,578 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_040288679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_040288679   ⟹   XP_040144613
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440505867,066,499 - 67,067,365 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040144613 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000027050.1
Reference Protein Sequences
RefSeq Acc Id: XP_040144613   ⟸   XM_040288679
- UniProtKB: A0A287D0M7 (UniProtKB/TrEMBL)
Protein Domains
Thioredoxin


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000023745 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000029700.2 UniProtKB/TrEMBL
Gene3D-CATH Glutaredoxin UniProtKB/TrEMBL
InterPro AhpC/TSA UniProtKB/TrEMBL
  Peroxiredoxin_AhpC-typ UniProtKB/TrEMBL
  Peroxiredoxin_C UniProtKB/TrEMBL
  Thioredoxin-like_sf UniProtKB/TrEMBL
  Thioredoxin_domain UniProtKB/TrEMBL
NCBI Gene LOC101967666 ENTREZGENE
PANTHER PEROXIREDOXIN-2 UniProtKB/TrEMBL
  THIOREDOXIN PEROXIDASE UniProtKB/TrEMBL
Pfam 1-cysPrx_C UniProtKB/TrEMBL
  AhpC-TSA UniProtKB/TrEMBL
PIRSF AHPC UniProtKB/TrEMBL
PROSITE THIOREDOXIN_2 UniProtKB/TrEMBL
Superfamily-SCOP Thioredoxin-like UniProtKB/TrEMBL
UniProt A0A287D0M7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC101967666  peroxiredoxin-2-like  LOC101967666  peroxiredoxin-2 pseudogene  Symbol and/or name change 5135510 APPROVED