Nat10 (N-acetyltransferase 10) - Rat Genome Database

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Gene: Nat10 (N-acetyltransferase 10) Ictidomys tridecemlineatus
Analyze
Symbol: Nat10
Name: N-acetyltransferase 10
RGD ID: 12600046
Description: ENCODES a protein that exhibits DNA polymerase binding (ortholog); mRNA N-acetyltransferase activity (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); positive regulation of translation (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN midbody (ortholog); small-subunit processome (ortholog); telomerase holoenzyme complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: N-acetyltransferase 10, transcript variant X1; N-acetyltransferase 10, transcript variant X2; RNA cytidine acetyltransferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494730,746,000 - 30,787,036 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365333,870,823 - 3,909,301 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365333,870,795 - 3,911,498 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Nat10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494730,746,000 - 30,787,036 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365333,870,823 - 3,909,301 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365333,870,795 - 3,911,498 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAT10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381134,105,629 - 34,146,908 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1134,105,617 - 34,147,670 (+)EnsemblGRCh38hg38GRCh38
GRCh371134,127,176 - 34,168,455 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361134,083,725 - 34,125,033 (+)NCBINCBI36Build 36hg18NCBI36
Celera1134,274,652 - 34,316,002 (+)NCBICelera
Cytogenetic Map11p13NCBI
HuRef1133,823,804 - 33,865,093 (+)NCBIHuRef
CHM1_11134,126,479 - 34,167,827 (+)NCBICHM1_1
T2T-CHM13v2.01134,242,631 - 34,283,911 (+)NCBIT2T-CHM13v2.0
Nat10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392103,551,603 - 103,593,292 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2103,551,601 - 103,591,615 (-)EnsemblGRCm39 Ensembl
GRCm382103,721,258 - 103,762,954 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2103,721,256 - 103,761,270 (-)EnsemblGRCm38mm10GRCm38
MGSCv372103,561,416 - 103,601,407 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362103,522,098 - 103,562,089 (-)NCBIMGSCv36mm8
Celera2104,970,490 - 105,010,522 (-)NCBICelera
Cytogenetic Map2E2NCBI
cM Map254.43NCBI
Nat10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83110,566,582 - 110,604,829 (-)NCBIGRCr8
mRatBN7.2390,111,643 - 90,149,891 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl390,111,645 - 90,149,927 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx393,605,100 - 93,643,339 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03102,204,183 - 102,242,418 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03100,035,432 - 100,073,697 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0393,658,119 - 93,698,136 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl393,658,117 - 93,698,136 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03100,298,716 - 100,338,733 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4389,015,613 - 89,054,370 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1388,915,788 - 88,947,613 (-)NCBI
Celera389,179,955 - 89,218,228 (-)NCBICelera
Cytogenetic Map3q32NCBI
Nat10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542212,085,970 - 12,122,425 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542212,085,970 - 12,122,644 (-)NCBIChiLan1.0ChiLan1.0
NAT10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2936,329,718 - 36,371,134 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11136,334,529 - 36,375,943 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01134,082,304 - 34,127,793 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11133,960,739 - 34,002,069 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1133,960,739 - 34,002,069 (+)Ensemblpanpan1.1panPan2
NAT10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11833,654,701 - 33,692,642 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1833,655,311 - 33,689,923 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1833,260,567 - 33,298,497 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01834,265,986 - 34,303,932 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1834,265,989 - 34,303,914 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11833,825,097 - 33,862,876 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01833,417,564 - 33,455,485 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01834,053,112 - 34,091,046 (-)NCBIUU_Cfam_GSD_1.0
NAT10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl226,786,177 - 26,826,992 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1226,786,172 - 26,827,060 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2229,153,541 - 29,194,433 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NAT10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1131,126,387 - 31,171,751 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl131,126,262 - 31,170,833 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038128,228,597 - 128,271,877 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nat10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476712,966,098 - 13,005,981 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476712,944,184 - 13,006,750 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000001831   ⟹   ENSSTOP00000001635
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365333,870,823 - 3,909,301 (-)Ensembl
RefSeq Acc Id: XM_005327421   ⟹   XP_005327478
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494730,746,723 - 30,787,036 (-)NCBI
SpeTri2.0NW_0049365333,870,795 - 3,911,498 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021727808   ⟹   XP_021583483
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494730,746,723 - 30,784,253 (-)NCBI
SpeTri2.0NW_0049365333,870,795 - 3,909,103 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040284518   ⟹   XP_040140452
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494730,746,000 - 30,782,438 (-)NCBI
RefSeq Acc Id: XM_040284519   ⟹   XP_040140453
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494730,746,723 - 30,784,288 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005327478 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583483 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140452 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140453 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000001635.2
GenBank Protein KAG3285481 (Get FASTA)   NCBI Sequence Viewer  
  KAG3285482 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005327478   ⟸   XM_005327421
- UniProtKB: I3LZA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583483   ⟸   XM_021727808
- UniProtKB: I3LZA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040140452   ⟸   XM_040284518
- UniProtKB: I3LZA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040140453   ⟸   XM_040284519
- UniProtKB: I3LZA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000001635   ⟸   ENSSTOT00000001831
Protein Domains
N-acetyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000001817 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000001831.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.11040 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  3.40.630.30 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
  Helicase_dom UniProtKB/TrEMBL
  NAT10 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  TmcA/NAT10/Kre33 UniProtKB/TrEMBL
  TmcA_N UniProtKB/TrEMBL
  tRNA_bind_dom UniProtKB/TrEMBL
NCBI Gene Nat10 ENTREZGENE
PANTHER PTHR10925 UniProtKB/TrEMBL
  RNA CYTIDINE ACETYLTRANSFERASE UniProtKB/TrEMBL
Pfam DUF1726 UniProtKB/TrEMBL
  GNAT_acetyltr_2 UniProtKB/TrEMBL
  Helicase_RecD UniProtKB/TrEMBL
  tRNA_bind_2 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt I3LZA6 ENTREZGENE, UniProtKB/TrEMBL