Gpr161 (G protein-coupled receptor 161) - Rat Genome Database

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Gene: Gpr161 (G protein-coupled receptor 161) Ictidomys tridecemlineatus
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Symbol: Gpr161
Name: G protein-coupled receptor 161
RGD ID: 12599573
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (inferred); G protein-coupled receptor signaling pathway (inferred); negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning (inferred); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); immunodeficiency 25 (ortholog); medulloblastoma (ortholog); FOUND IN cilium (inferred); glial cell projection (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: G-protein coupled receptor 161
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344100,250,949 - 100,284,605 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648118,097,692 - 18,129,873 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648118,097,704 - 18,130,023 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gpr161
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344100,250,949 - 100,284,605 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648118,097,692 - 18,129,873 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648118,097,704 - 18,130,023 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR161
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381168,079,542 - 168,137,667 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1168,079,542 - 168,137,667 (-)EnsemblGRCh38hg38GRCh38
GRCh371168,048,780 - 168,106,905 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361166,320,621 - 166,372,248 (-)NCBINCBI36Build 36hg18NCBI36
Celera1141,162,980 - 141,214,616 (-)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1139,293,385 - 139,351,133 (-)NCBIHuRef
CHM1_11169,470,990 - 169,529,180 (-)NCBICHM1_1
T2T-CHM13v2.01167,431,007 - 167,489,154 (-)NCBIT2T-CHM13v2.0
Gpr161
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391165,108,760 - 165,154,314 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1165,123,358 - 165,154,314 (+)EnsemblGRCm39 Ensembl
GRCm381165,281,184 - 165,326,747 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,295,789 - 165,326,745 (+)EnsemblGRCm38mm10GRCm38
MGSCv371167,225,897 - 167,251,982 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361167,132,441 - 167,161,079 (+)NCBIMGSCv36mm8
Celera1167,740,027 - 167,766,443 (+)NCBICelera
Cytogenetic Map1H2.2NCBI
cM Map172.64NCBI
Gpr161
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81380,111,271 - 80,156,517 (+)NCBIGRCr8
mRatBN7.21377,578,257 - 77,623,661 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1377,577,739 - 77,619,613 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01383,530,389 - 83,576,117 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1383,531,018 - 83,571,505 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01388,409,782 - 88,455,575 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41381,053,624 - 81,074,896 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1377,290,655 - 77,336,787 (+)NCBICelera
Cytogenetic Map13q23NCBI
Gpr161
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554628,981,157 - 9,028,946 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554628,981,729 - 9,034,009 (+)NCBIChiLan1.0ChiLan1.0
GPR161
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2181,627,443 - 81,685,495 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1181,295,579 - 81,354,170 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01143,566,775 - 143,625,357 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11147,293,355 - 147,351,510 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,299,350 - 147,350,451 (-)Ensemblpanpan1.1panPan2
GPR161
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1730,364,999 - 30,411,038 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl730,366,068 - 30,407,268 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha729,895,733 - 29,948,158 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0730,176,808 - 30,229,264 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl730,182,446 - 30,224,803 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1730,016,737 - 30,069,149 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0730,047,700 - 30,100,163 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0730,285,703 - 30,338,184 (+)NCBIUU_Cfam_GSD_1.0
GPR161
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl482,844,941 - 82,905,534 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1482,844,944 - 82,909,329 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2490,518,333 - 90,577,014 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR161
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12560,908,741 - 60,965,168 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2560,940,047 - 60,959,181 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605562,633,696 - 62,690,375 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr161
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248266,089,127 - 6,134,127 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248266,089,127 - 6,135,076 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000026719   ⟹   ENSSTOP00000023369
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493648118,097,692 - 18,129,873 (+)Ensembl
RefSeq Acc Id: XM_005319841   ⟹   XP_005319898
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024409344100,250,949 - 100,284,605 (+)NCBI
SpeTri2.0NW_00493648118,097,704 - 18,130,023 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021722688   ⟹   XP_021578363
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024409344100,250,949 - 100,284,605 (+)NCBI
SpeTri2.0NW_00493648118,097,704 - 18,130,023 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005319898 (Get FASTA)   NCBI Sequence Viewer  
  XP_021578363 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000023369.2
GenBank Protein KAG3258808 (Get FASTA)   NCBI Sequence Viewer  
  KAG3258809 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005319898   ⟸   XM_005319841
- Peptide Label: isoform X1
- UniProtKB: I3NG72 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021578363   ⟸   XM_021722688
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSSTOP00000023369   ⟸   ENSSTOT00000026719
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000024601 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000026719.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene Gpr161 ENTREZGENE
PANTHER G PROTEIN-COUPLED RECEPTOR UniProtKB/TrEMBL
  G-PROTEIN COUPLED RECEPTOR 161 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt I3NG72 ENTREZGENE, UniProtKB/TrEMBL