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Gene: Tubgcp4 (tubulin gamma complex component 4) Ictidomys tridecemlineatus

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Symbol:

Tubgcp4

Name:

tubulin gamma complex component 4

RGD ID:

12560385

Description:

ENCODES a protein that exhibits gamma-tubulin binding (inferred); microtubule minus-end binding (inferred); INVOLVED IN cytoplasmic microtubule organization (inferred); meiotic cell cycle (inferred); microtubule nucleation (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); cytoskeleton (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

gamma-tubulin complex component 4; tubulin gamma complex associated protein 4; tubulin gamma complex associated protein 4, transcript variant X1; tubulin gamma complex associated protein 4, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	88,694,232 - 88,740,363 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	6,541,713 - 6,591,692 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	6,542,295 - 6,588,484 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

genetic disease (ISO)

microcephaly and chorioretinopathy 1 (ISO)

microcephaly and chorioretinopathy 3 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cytoplasmic microtubule organization (IEA)

meiotic cell cycle (IEA)

microtubule nucleation (IEA)

mitotic cell cycle (IEA)

spindle assembly (IEA)

Cellular Component

centrosome (IEA)

cytoplasm (IEA)

cytoskeleton (IEA)

gamma-tubulin complex (IEA)

microtubule (IEA)

microtubule organizing center (IEA)

recycling endosome (IEA)

spindle pole (IEA)

Molecular Function

gamma-tubulin binding (IEA)

microtubule minus-end binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Tubgcp4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	88,694,232 - 88,740,363 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	6,541,713 - 6,591,692 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	6,542,295 - 6,588,484 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TUBGCP4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	43,371,101 - 43,409,771 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	43,369,221 - 43,409,771 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	43,663,299 - 43,701,969 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	41,450,605 - 41,485,550 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	20,433,964 - 20,468,909 (+)	NCBI		Celera
Cytogenetic Map	15	q15.3	NCBI
HuRef	15	20,511,346 - 20,546,292 (+)	NCBI		HuRef
CHM1_1	15	43,781,984 - 43,816,927 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	41,178,438 - 41,217,106 (+)	NCBI		T2T-CHM13v2.0

Tubgcp4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	121,001,124 - 121,029,251 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	121,001,135 - 121,029,251 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	121,170,643 - 121,198,770 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	121,170,654 - 121,198,770 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	120,996,942 - 121,022,854 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	120,862,647 - 120,888,559 (+)	NCBI		MGSCv36	mm8
Celera	2	122,323,219 - 122,349,105 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.37	NCBI

Tubgcp4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	128,594,052 - 128,628,789 (+)	NCBI		GRCr8
mRatBN7.2	3	108,141,081 - 108,172,207 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	108,141,625 - 108,169,437 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	111,816,474 - 111,847,730 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	120,412,057 - 120,443,313 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	118,072,452 - 118,103,714 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	113,131,292 - 113,160,750 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	113,131,327 - 113,158,720 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	119,671,721 - 119,699,844 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	107,971,085 - 107,999,335 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	107,867,558 - 107,892,915 (+)	NCBI
Celera	3	107,045,672 - 107,073,870 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

Tubgcp4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	9,933,695 - 9,962,635 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	9,933,695 - 9,962,635 (+)	NCBI	ChiLan1.0	ChiLan1.0

TUBGCP4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	32,622,222 - 32,661,800 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	36,783,954 - 36,820,848 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	22,332,076 - 22,371,360 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	40,486,665 - 40,522,996 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	40,486,665 - 40,522,996 (+)	Ensembl	panpan1.1		panPan2

TUBGCP4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	10,226,558 - 10,262,805 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	10,225,952 - 10,262,804 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	10,285,400 - 10,321,385 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	10,362,630 - 10,398,902 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	10,362,552 - 10,400,412 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	10,279,196 - 10,315,174 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	10,400,295 - 10,436,486 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	10,520,237 - 10,556,235 (+)	NCBI		UU_Cfam_GSD_1.0

TUBGCP4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	128,029,406 - 128,083,958 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	128,029,393 - 128,084,039 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	142,887,944 - 142,940,339 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TUBGCP4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	39,596,788 - 39,630,859 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	39,593,342 - 39,630,536 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	101,382,888 - 101,420,842 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tubgcp4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624804	10,483,176 - 10,518,802 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005316483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013358193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000006941 ⟹ ENSSTOP00000006204

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	6,542,484 - 6,587,638 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000031661 ⟹ ENSSTOP00000027169

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	6,541,713 - 6,591,692 (+)	Ensembl

RefSeq Acc Id:

XM_005316483 ⟹ XP_005316540

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	88,694,232 - 88,740,363 (+)	NCBI
SpeTri2.0	NW_004936471	6,542,295 - 6,588,484 (+)	NCBI

Sequence:

show sequence

CGGGACGTGGCGCGCTGGTTCCTTCCCGGCTTCCCGTCAGCTCCTCTGGCTGCAGTTGGCACGG
CGGGTTCAGGGTAAACCGCCTAAGCCAGAGGCCAGTGCGTGTGTCGAAGAGGAGGCACCCTTAG
CGTGTTCGCCTGGAAGAGCGCTGAAGGAGGAAGCGACGTATCTAAGGATTCCGCCGTGGGAATG
ATCCACGAACTGCTTCTGGCTCTGAGCGGGTACCCAGGATCCATATTCACCTGGAACAAGAGGA
GTGGCTTGCAGGTGTCCCAGGACTTTCCATTTCTCCACCCCAGTGAGACCAGCGTCTTGAATCG
ACTCTGCCGGCTTGGCACAGACTATATTCGATTTACTGAGTTCATTGAACAGTACACAGGCCAT
GTGCAGCAACAGGACCACCACCTATCTCAGCAAGGACCAGGTGGGCTACATGGAATCTATCTGA
GGGCCTTCTGCACAGGGCTGGATTCAGTTCTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGA
ACAAGAGTTCCTGGCTGACCCGCATCTCTCCATATCACATGTCAATTACTCCTTAGATCAGTTC
CAACTACTTTTTCCCTCTGTGATGGTTGTAGTAGAGCAAATTAAAAGTCAAAAGATTCATGGTT
GTCAAATCCTAGAAACAGTCTACAAACACAGCTGTGGAGGGTTACCTCCTGTTCGAAGTGCACT
AGAAAAAATCCTGGCTGTGTGTCATGGGGTCATGTATAAACAGCTCTCAGCGTGGATGCTACAT
GGACTCCTACTGGACCAGCATGAAGAGTTCTTTATCAAACAGGGTCCATCTTCTGGTAATACAA
ATGCCCAGTCAGAAGAGGATGAGGAGGATCTGGGCATTGGGGGATTGACAGGAAAACAACTGAG
AGAACTCCAGGACTTGCGCCTGATTGAGGAAGAGAACATGCTGGCACCATCTCTCAAGCAGTTT
TCCCTACGGGTAGAGATTTTGCCATCCTACATTCCAGTGAGGGTTGCTGAAAAAATACTCTTTG
TTGGAGAATCTGTCCAGATGTTTGAGAATCAAAATGTGAACCTGACTAGAAAAGGATCCATTTT
GAAAAACCAGGAGGACACTTTTGCTGCAGAGCTGCATCGACTCAAGCAGCAGCCACTTTTCAGT
TTGGTGGATTTTGAGCAGGTGGTGGATCGTATTCGCAGTACTGTGGCTGAGCATCTCTGGAAGC
TGATGGTAGAGGAGTCAGATCTGCTGGGTCAGCTGAAGATCATTAAAGACTTTTACCTTCTGGG
ACGAGGAGAACTCTTTCAGGCCTTCATTGACACAGCTCAACACATGTTAAAAACACCACCCACT
GCAGTAACTGAGCATGATGTGAATGTGGCCTTTCAACAGTCAGCACACAAGGTATTGTTGGATG
ATGACAACCTTCTTCCTCTGTTGCACTTGACAATCGAGTATCATGGAAAGGAGCACAAAGCAGA
TGTTACTCAGGCAAGAGAAGCACCTTCTCGGGAAACTTCCCCCCGGGAAGCCCCTGCATCTGGC
TGGGCAGCCCTTGGTCTTTCCTACAAAGTACAATGGCCTCTACACATTCTCTTCACCCCAGCTG
TCCTGGAAAAGTACAATGTTGTTTTTAAGTATTTACTGAGTGTGCGCCGGGTCCAAGCTGAACT
GCAGCACTGCTGGGCCCTACAAATGCAGCGTAAACACCTCAAGTCCAACCAGACTGATGCAGTC
AAGTGGCGCCTAAGAAACCACATGGCCTTCTTGGTAGATAATCTTCAATACTATCTCCAGGTAG
ATGTGCTGGAGTCTCAGTTCTCACAGCTGCTTCATCAAATCAATTCTACTCGAGACTTTGAAAG
CATCCGATTGGCTCACGACCACTTCCTAAGCAATTTGCTGGCTCAGTCCTTTATCTTATTGAAA
CCTGTGTTTCACTGCCTGAATGAAATCTTAGATCTCTGTCACAGTTTTTGTTCACTGGTCAGTC
AGAACCTGGGCCCTCTAGATGAGCGTGGAGCTGCCCAGCTGAGCATTCTCGTGAAGGGCTTTAG
CCGCCAGTCTTCACTTCTATTCAAGATTCTCTCCAGTGTCCGGAATCATCAGATCAACTCAGAT
TTGGCTCAACTACTGTTACGACTAGATTATAACAAATACTACACTCAGGCTGGCGGAACTCTGG
GCAGTTTCGGGATGTGAAAACTACTGGTTCATAAGCCGAAATAACAGTTATTCTCACCACATTC
TCAAGTCTGTTACCGAAGATTCATCCTATTCTCTAGCCATTCACCAAATATCTGCAGCCTAGTA
AGAGGGCTTTACCTTTTCTCTTAGAAATAATCCAAAGGTAGAAGTCCTTCCCATCATTCCCATT
TGGAATGTGACTGCCCACACCAAGGAGAACCTGTGGAGTCAGCTGTCCCTCTGCTGACCATACA
AGGCTCCTATCCTTTACACTAAGAGCATCTGCTAGGCATGTTCATTATTTATTCATCAGTTTTT
TTATGGGGCATTTACCATGTGCCTAGGTTCTATTCAAGGTGTGGGAAATACAGTAGTAAATGCA
AAGATCAGAAGTTTCTTTGTGTGTGTGGGGGGAGGGGGGATTATATGTAAAAAAGGAATGTTTA
CAAATAGATCAACTGATGGATGTTACCAGCAAGTAAGAAATACAAAGGTGAGAAAGACTTTCCT
TCTCCCTGTATCAAGTAACATGCCTACACAGATTCTTTCCTCCTTTAAAATTTATGAGCCTTCC
AGCCTTAAGGATCTTCAAACCTGTGAATCTTAAGAATTTTGCAAGTTCCAATTCATATGGACAG
GTAAAAGGGCAATTCTAGCTAGTAACAATATATTTAAAGTATTTTTCCACCAATGAAAAAGATC
TTTTAAGAGAAAATCGGGGTCAAGTTGTTACTGGAAATTATGGCCAGTTATTCTACCTTGTGAC
AAGTGACAGGAATTAAAGTTCCCCTGACATGACCCAATCATCATGGATAATCATTAATGTTGGT
ATCAGTGTGAATAAAGTAAATATTCACTTAA

hide sequence

RefSeq Acc Id:

XM_013358193 ⟹ XP_013213647

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	88,694,232 - 88,740,363 (+)	NCBI
SpeTri2.0	NW_004936471	6,542,295 - 6,588,484 (+)	NCBI

Sequence:

show sequence

CGGGACGTGGCGCGCTGGTTCCTTCCCGGCTTCCCGTCAGCTCCTCTGGCTGCAGTTGGCACGG
CGGGTTCAGGGTAAACCGCCTAAGCCAGAGGCCAGTGCGTGTGTCGAAGAGGAGGCACCCTTAG
CGTGTTCGCCTGGAAGAGCGCTGAAGGAGGAAGCGACGTATCTAAGGATTCCGCCGTGGGAATG
ATCCACGAACTGCTTCTGGCTCTGAGCGGGTACCCAGGATCCATATTCACCTGGAACAAGAGGA
GTGGCTTGCAGGTGTCCCAGGACTTTCCATTTCTCCACCCCAGTGAGACCAGCGTCTTGAATCG
ACTCTGCCGGCTTGGCACAGACTATATTCGATTTACTGAGTTCATTGAACAGTACACAGGCCAT
GTGCAGCAACAGGACCACCACCTATCTCAGCAAGGACCAGGTGGGCTACATGGAATCTATCTGA
GGGCCTTCTGCACAGGGCTGGATTCAGTTCTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGA
ACAAGAGTTCCTGGCTGACCCGCATCTCTCCATATCACATGTCAATTACTCCTTAGATCAGTTC
CAACTACTTTTTCCCTCTGTGATGGTTGTAGTAGAGCAAATTAAAAGTCAAAAGATTCATGGTT
GTCAAATCCTAGAAACAGTCTACAAACACAGCTGTGGAGGGTTACCTCCTGTTCGAAGTGCACT
AGAAAAAATCCTGGCTGTGTGTCATGGGGTCATGTATAAACAGCTCTCAGCGTGGATGCTACAT
GGACTCCTACTGGACCAGCATGAAGAGTTCTTTATCAAACAGGGTCCATCTTCTGGTAATACAA
ATGCCCAGTCAGAAGAGGATGAGGAGGATCTGGGCATTGGGGGATTGACAGGAAAACAACTGAG
AGAACTCCAGGACTTGCGCCTGATTGAGGAAGAGAACATGCTGGCACCATCTCTCAAGCAGTTT
TCCCTACGGGTAGAGATTTTGCCATCCTACATTCCAGTGAGGGTTGCTGAAAAAATACTCTTTG
TTGGAGAATCTGTCCAGATGTTTGAGAATCAAAATGTGAACCTGACTAGAAAAGGATCCATTTT
GAAAAACCAGGAGGACACTTTTGCTGCAGAGCTGCATCGACTCAAGCAGCAGCCACTTTTCAGT
TTGGTGGATTTTGAGCAGGTGGTGGATCGTATTCGCAGTACTGTGGCTGAGCATCTCTGGAAGC
TGATGGTAGAGGAGTCAGATCTGCTGGGTCAGCTGAAGATCATTAAAGACTTTTACCTTCTGGG
ACGAGGAGAACTCTTTCAGGCCTTCATTGACACAGCTCAACACATGTTAAAAACACCACCCACT
GCAGTAACTGAGCATGATGTGAATGTGGCCTTTCAACAGTCAGCACACAAGGTATTGTTGGATG
ATGACAACCTTCTTCCTCTGTTGCACTTGACAATCGAGTATCATGGAAAGGAGCACAAAGATGT
TACTCAGGCAAGAGAAGCACCTTCTCGGGAAACTTCCCCCCGGGAAGCCCCTGCATCTGGCTGG
GCAGCCCTTGGTCTTTCCTACAAAGTACAATGGCCTCTACACATTCTCTTCACCCCAGCTGTCC
TGGAAAAGTACAATGTTGTTTTTAAGTATTTACTGAGTGTGCGCCGGGTCCAAGCTGAACTGCA
GCACTGCTGGGCCCTACAAATGCAGCGTAAACACCTCAAGTCCAACCAGACTGATGCAGTCAAG
TGGCGCCTAAGAAACCACATGGCCTTCTTGGTAGATAATCTTCAATACTATCTCCAGGTAGATG
TGCTGGAGTCTCAGTTCTCACAGCTGCTTCATCAAATCAATTCTACTCGAGACTTTGAAAGCAT
CCGATTGGCTCACGACCACTTCCTAAGCAATTTGCTGGCTCAGTCCTTTATCTTATTGAAACCT
GTGTTTCACTGCCTGAATGAAATCTTAGATCTCTGTCACAGTTTTTGTTCACTGGTCAGTCAGA
ACCTGGGCCCTCTAGATGAGCGTGGAGCTGCCCAGCTGAGCATTCTCGTGAAGGGCTTTAGCCG
CCAGTCTTCACTTCTATTCAAGATTCTCTCCAGTGTCCGGAATCATCAGATCAACTCAGATTTG
GCTCAACTACTGTTACGACTAGATTATAACAAATACTACACTCAGGCTGGCGGAACTCTGGGCA
GTTTCGGGATGTGAAAACTACTGGTTCATAAGCCGAAATAACAGTTATTCTCACCACATTCTCA
AGTCTGTTACCGAAGATTCATCCTATTCTCTAGCCATTCACCAAATATCTGCAGCCTAGTAAGA
GGGCTTTACCTTTTCTCTTAGAAATAATCCAAAGGTAGAAGTCCTTCCCATCATTCCCATTTGG
AATGTGACTGCCCACACCAAGGAGAACCTGTGGAGTCAGCTGTCCCTCTGCTGACCATACAAGG
CTCCTATCCTTTACACTAAGAGCATCTGCTAGGCATGTTCATTATTTATTCATCAGTTTTTTTA
TGGGGCATTTACCATGTGCCTAGGTTCTATTCAAGGTGTGGGAAATACAGTAGTAAATGCAAAG
ATCAGAAGTTTCTTTGTGTGTGTGGGGGGAGGGGGGATTATATGTAAAAAAGGAATGTTTACAA
ATAGATCAACTGATGGATGTTACCAGCAAGTAAGAAATACAAAGGTGAGAAAGACTTTCCTTCT
CCCTGTATCAAGTAACATGCCTACACAGATTCTTTCCTCCTTTAAAATTTATGAGCCTTCCAGC
CTTAAGGATCTTCAAACCTGTGAATCTTAAGAATTTTGCAAGTTCCAATTCATATGGACAGGTA
AAAGGGCAATTCTAGCTAGTAACAATATATTTAAAGTATTTTTCCACCAATGAAAAAGATCTTT
TAAGAGAAAATCGGGGTCAAGTTGTTACTGGAAATTATGGCCAGTTATTCTACCTTGTGACAAG
TGACAGGAATTAAAGTTCCCCTGACATGACCCAATCATCATGGATAATCATTAATGTTGGTATC
AGTGTGAATAAAGTAAATATTCACTTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005316540	(Get FASTA)	NCBI Sequence Viewer
	XP_013213647	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000006204.3
	ENSSTOP00000027169.1
GenBank Protein	KAG3261733	(Get FASTA)	NCBI Sequence Viewer
	KAG3261734	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005316540 ⟸ XM_005316483
- Peptide Label:	isoform X1
- UniProtKB:	I3M8T8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIEQYTG HVQQQDHHLSQQGPGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLADPHLSISHVNYSLDQ FQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWML HGLLLDQHEEFFIKQGPSSGNTNAQSEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQ FSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLF SLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPP TAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHKADVTQAREAPSRETSPREAPAS GWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDA VKWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILL KPVFHCLNEILDLCHSFCSLVSQNLGPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINS DLAQLLLRLDYNKYYTQAGGTLGSFGM hide sequence

RefSeq Acc Id:	XP_013213647 ⟸ XM_013358193
- Peptide Label:	isoform X2
- UniProtKB:	A0A287D0W6 (UniProtKB/TrEMBL), I3M8T8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIEQYTG HVQQQDHHLSQQGPGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLADPHLSISHVNYSLDQ FQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWML HGLLLDQHEEFFIKQGPSSGNTNAQSEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQ FSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLF SLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPP TAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHKDVTQAREAPSRETSPREAPASG WAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAV KWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLK PVFHCLNEILDLCHSFCSLVSQNLGPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSD LAQLLLRLDYNKYYTQAGGTLGSFGM hide sequence

Ensembl Acc Id:

ENSSTOP00000027169 ⟸ ENSSTOT00000031661

Ensembl Acc Id:

ENSSTOP00000006204 ⟸ ENSSTOT00000006941

Protein Domains

Gamma tubulin complex component C-terminal Gamma tubulin complex component protein N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000006918	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000006941.3	UniProtKB/TrEMBL
	ENSSTOT00000031661.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.120.1900	UniProtKB/TrEMBL
InterPro	GCP	UniProtKB/TrEMBL
	GCP_C	UniProtKB/TrEMBL
	GCP_C_sf	UniProtKB/TrEMBL
	GCP_N	UniProtKB/TrEMBL
NCBI Gene	Tubgcp4	ENTREZGENE
PANTHER	GAMMA-TUBULIN COMPLEX COMPONENT 4	UniProtKB/TrEMBL
	PTHR19302	UniProtKB/TrEMBL
Pfam	GCP_C_terminal	UniProtKB/TrEMBL
	GCP_N_terminal	UniProtKB/TrEMBL
UniProt	A0A287D0W6	ENTREZGENE, UniProtKB/TrEMBL
	I3M8T8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-06-21	Tubgcp4	tubulin gamma complex component 4	Tubgcp4	tubulin gamma complex associated protein 4	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM