Gvqw3 (GVQW motif containing 3) - Rat Genome Database

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Gene: Gvqw3 (GVQW motif containing 3) Ictidomys tridecemlineatus
Analyze
Symbol: Gvqw3
Name: GVQW motif containing 3
RGD ID: 12504761
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC106144803; putative uncharacterized protein FLJ37770
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494763,477,874 - 63,502,998 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364985,077,539 - 5,078,915 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Gvqw3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494763,477,874 - 63,502,998 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364985,077,539 - 5,078,915 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GVQW3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381176,381,323 - 76,414,634 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1176,381,303 - 76,414,619 (+)EnsemblGRCh38hg38GRCh38
GRCh371176,092,367 - 76,125,678 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera1173,400,168 - 73,426,988 (+)NCBICelera
Cytogenetic Map11q13.5NCBI
HuRef1172,389,193 - 72,422,552 (+)NCBIHuRef
CHM1_11175,975,796 - 76,009,154 (+)NCBICHM1_1
T2T-CHM13v2.01176,311,048 - 76,344,366 (+)NCBIT2T-CHM13v2.0
Gm57488
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39798,351,065 - 98,352,083 (-)NCBIGRCm39GRCm39mm39
GRCm38798,701,858 - 98,702,876 (-)NCBIGRCm38GRCm38mm10GRCm38
Cytogenetic Map7E1NCBI
Gvqw3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541415,484,559 - 15,538,991 (-)NCBIChiLan1.0ChiLan1.0
GVQW3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2977,303,936 - 77,345,862 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11178,349,191 - 78,391,116 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01171,432,922 - 71,468,862 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11175,060,364 - 75,093,235 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1175,066,872 - 75,093,235 (-)Ensemblpanpan1.1panPan2
GVQW3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12122,285,801 - 22,292,994 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2122,291,858 - 22,292,484 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.02122,488,446 - 22,495,628 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2122,494,497 - 22,495,123 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12122,263,076 - 22,270,253 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02122,482,494 - 22,489,674 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02122,401,640 - 22,409,058 (-)NCBIUU_Cfam_GSD_1.0
GVQW3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl910,566,782 - 10,572,668 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1910,567,270 - 10,600,780 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2911,670,812 - 11,673,605 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Gvqw3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624817743,186 - 785,298 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_040284971   ⟹   XP_040140905
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494763,477,903 - 63,488,017 (+)NCBI
RefSeq Acc Id: XM_040284972   ⟹   XP_040140906
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494763,477,874 - 63,502,998 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040140905 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140906 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040140906   ⟸   XM_040284972
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040140905   ⟸   XM_040284971
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC106144803 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-24 Gvqw3  GVQW motif containing 3  LOC106144803  putative uncharacterized protein FLJ37770  Symbol and/or name change 5135510 APPROVED