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Gene: Col14a1 (collagen type XIV alpha 1 chain) Ictidomys tridecemlineatus

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Symbol:

Col14a1

Name:

collagen type XIV alpha 1 chain

RGD ID:

12484041

Description:

INVOLVED IN collagen fibril organization (ortholog); homeostasis of number of cells within a tissue (ortholog); regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular matrix (inferred); interstitial matrix (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

collagen alpha-1(XIV) chain; collagen type XIV alpha 1 chain, transcript variant X1; collagen type XIV alpha 1 chain, transcript variant X2; collagen type XIV alpha 1 chain, transcript variant X3; collagen type XIV alpha 1 chain, transcript variant X4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mIctTri1.hap1 - mIctTri1.hap1 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	7	19,037,628 - 19,238,914 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024405303	19,013,239 - 19,216,888 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	26,440,615 - 26,643,015 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	26,440,606 - 26,643,015 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

Breast Cancer, Familial (ISO)

cervical cancer (ISO)

Chemical and Drug Induced Liver Injury (ISO)

colon adenocarcinoma (ISO)

esophagus squamous cell carcinoma (ISO)

Familial Pancreatic Carcinoma (ISO)

head and neck squamous cell carcinoma (ISO)

hepatocellular carcinoma (ISO)

high grade glioma (ISO)

lung cancer (ISO)

lymphoma (ISO)

melanoma (ISO)

nonpapillary renal cell carcinoma (ISO)

ovarian serous cystadenocarcinoma (ISO)

sarcoma (ISO)

stomach cancer (ISO)

Thyroid Carcinoma, Nonmedullary 1 (ISO)

uterine carcinosarcoma (ISO)

uterine corpus endometrial carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

collagen fibril organization (ISO)

homeostasis of number of cells within a tissue (ISO)

regulation of cell growth involved in cardiac muscle cell development (ISO)

ventricular cardiac muscle tissue development (ISO)

Cellular Component

extracellular matrix (IEA)

interstitial matrix (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

syndecan signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Col14a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	7	19,037,628 - 19,238,914 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024405303	19,013,239 - 19,216,888 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	26,440,615 - 26,643,015 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	26,440,606 - 26,643,015 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COL14A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	120,124,454 - 120,373,573 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	120,059,780 - 120,373,573 (+)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	8	121,136,693 - 121,385,812 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	121,206,533 - 121,453,454 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	8	117,326,467 - 117,573,360 (+)	NCBI		Celera
Cytogenetic Map	8	q24.12	NCBI
HuRef	8	116,457,995 - 116,704,917 (+)	NCBI		HuRef
CHM1_1	8	121,177,769 - 121,424,764 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	121,253,115 - 121,502,333 (+)	NCBI		T2T-CHM13v2.0

Col14a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	55,171,040 - 55,384,199 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	55,171,140 - 55,384,199 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	55,307,644 - 55,520,803 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	55,307,750 - 55,520,803 (+)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	15	55,139,305 - 55,352,358 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	55,137,834 - 55,350,884 (+)	NCBI		MGSCv36	mm8
Celera	15	56,848,017 - 57,052,928 (+)	NCBI		Celera
Cytogenetic Map	15	D1	NCBI
cM Map	15	21.96	NCBI

Col14a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	88,611,827 - 88,826,939 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	88,611,828 - 88,826,938 (+)	Ensembl				GRCr8
mRatBN7.2	7	86,722,093 - 86,937,215 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	86,722,094 - 86,937,214 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	88,603,806 - 88,818,960 (+)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	90,805,004 - 91,020,168 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	90,610,464 - 90,825,601 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	7	90,672,253 - 90,887,383 (+)	NCBI
Lyon_Normotensive	7	91,559,619 - 91,774,733 (+)	NCBI
Lyon_Hypertensive	7	91,698,705 - 91,913,840 (+)	NCBI
F344_StmMcwi	7	90,175,858 - 90,384,085 (+)	NCBI
Rnor_6.0	7	95,054,877 - 95,274,073 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	95,074,236 - 95,273,298 (+)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	7	95,678,302 - 95,896,126 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	91,801,534 - 92,032,966 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	83,515,260 - 83,730,170 (+)	NCBI		Celera
RGSC_v3.1	7	91,835,769 - 92,067,196 (+)	NCBI
Cytogenetic Map	7	q32	NCBI

Col14a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	25,579,547 - 25,774,127 (+)	Ensembl		ChiLan1.0 Ensembl
ChiLan1.0	NW_004955417	25,579,547 - 25,774,067 (+)	NCBI	ChiLan1.0	ChiLan1.0

COL14A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	137,553,479 - 137,799,154 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	113,065,502 - 113,312,629 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	116,818,467 - 117,065,385 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	119,588,512 - 119,834,226 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	119,610,929 - 119,831,880 (+)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

COL14A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	19,033,423 - 19,249,189 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	19,011,897 - 19,248,568 (+)	Ensembl		CanFam3.1 Ensembl	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	19,046,227 - 19,261,948 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	19,362,705 - 19,578,555 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	19,363,930 - 19,578,545 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	19,089,930 - 19,305,655 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	19,189,397 - 19,405,255 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	19,420,220 - 19,638,341 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

COL14A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	18,690,198 - 18,924,971 (-)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	4	18,690,197 - 18,925,111 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	19,715,672 - 19,949,740 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COL14A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	8	123,840,913 - 124,092,806 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666039	25,334,593 - 25,585,541 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	8	114,701,662 - 114,946,216 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	114,701,664 - 114,887,483 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

Col14a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624763	17,982,646 - 18,172,742 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624763	17,982,646 - 18,172,904 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl	21	51,995,491 - 52,185,194 (+)	Ensembl

Col14a1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	229,713,639 - 229,923,541 (+)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013357058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_078016743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_078016744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_078016745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JBPVTT010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000019975 ⟹ ENSSTOP00000022588

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936470	26,440,615 - 26,643,015 (-)	Ensembl

RefSeq Acc Id:

XM_013357058 ⟹ XP_013212512

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,037,628 - 19,238,913 (-)	NCBI
HiC_Itri_2	NW_024405303	19,013,239 - 19,216,888 (-)	NCBI
SpeTri2.0	NW_004936470	26,440,606 - 26,643,015 (-)	NCBI

Sequence:

show sequence

ACAAGAAGAGGGAGAAAGGCTAATAGAAAAAAAATTTAAAAAGAAAAAAGAAAAAAAAAAAAAG
AGAGGGAAGCGAACAAGGAACCGTGCGTTGCGGTGCGCCACTGGGAACCAACTCCAGGAGGATC
TTCCTTAGTCGCCAAGAGGTTTCCAGCCTGGGCTGGAAGCTTGCCTTGCACAGGTCAGCTGCTA
CACCCCATGTAAAAGGCAGAAAATAAAATGAAGATTTTTCAGTGCAAGATGCGGTACTGGCTGA
TCCCAGCTTTTTTGGCAATTGCATATTTCTGCACTATCGTCCAGGGTCAAGTGGCTCCACCCAC
ACGGTTAAGGTATAATGTCTTATCTCAGGACAGTATACAGATTTCATGGAAGGCTCCAAGAGGG
AAATTTGGTGGATACAAACTTCTTGTGACTCCAGCTTCAGGAGGAAAAACCAATCAATTGAATC
TCCAGAACACTGCAACTAAAGCAATTATTCAAGGTCTTATGCCAGAGCAGAATTACACAGTTCA
ACTTATTGCATACCATAAAGACAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT
TTGGAAAAAAGAAAGGATCCAACAAAGCCCAGAGCCAAGGTTGTGGATAAAGGAAATGGGACGA
AACCCACTGTACCAGAAGTGAAATTTTTCTGTGAAACTCCAGCGATTGCTGATATTGTGATCTT
GGTTGATGGTTCTTGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCTTTTCTTGGAAAAC
TTGGTTACAGCGTTCAATGTGGGCTCAGAGAAGACACGAATTGGCCTTGCACAGTATAGTGGTG
ACCCCAGAATAGAATGGCACTTGAATGCCTTCAACACAAAAGATGAAGTGATTGAAGCTGTCCG
GAACCTTCCATACAAGGGAGGGAATACCCTAACAGGTCTTGCTTTGAGCTACATTTTTGAAAAT
AGCTTTAAACCAGAAGCAGGATCAAGGACTGGAGTTTCCAAAATTGGCATCTTAATCACAGATG
GAAAATCTCAAGATGATATTATTCCGCCATCTAGAAACCTTCGTGAGTCTGGTGTAGAACTGTT
TGCTATAGGGGTGAAAAACGCTGACCTGAACGAGCTGCAGGAGATCGCCTCGGAACCGGACAGC
ACGCACGTGTACAACGTTGCCGAATTCGATCTGATGCACACGGTGGTGGAGAGCCTGACGAGGA
CCGTGTGTTCCAGGGTGGAAGAACAGGACCGGGAAATTAAAGCCTCAGCCCTCACCACCATTGG
GCCACCTACAGAGTTGATTACTTCTGAAGTCACAGCCAGAAGCTTTATGGTTAACTGGACTCAT
GCCCCAGGAAAAGTGGAAAAATACAGAGTTGTGTATTATCCCACCAGAGGTGGAAAACCACAAG
AGGTGGTGGTGGATGGAAGCTTATCTTCCACAGTGTTGAAAAATTTGATGTCTTTGACTGAATA
TCAAGTAGCGGTATTTGCAATATATGCTCACACTGCTAGTGAAGGCCTGAGAGGAACTGAAACC
ACACTTGCTTTACCCATGGCTTCTGACCTTGAACTATACGATGTGACGGAAAACAGTTTGCGTG
TCAGATGGGACGCAGTTCCTGGGGCCACAGGATACCTGATCCTCTATGCTCCTCTCACAGAGGG
CCTGGCTGGGGATGAAAAAGAGATGAAAATTGGAGAGACCCACACAGACATTGAGTTAAGTGGG
TTGGTCCCCAATACGGAGTACACAGTCACAGTTTATGCCATGTTTGGGGAAGAGGCCAGTGATC
CTGCTACAGGACAAGAAACAACATTGCCTTTATCTCCACCAAGAAACCTGAGAATCTCCAATAT
TGGCTCTAACAGTGCTCGATTATCCTGGGACCCTACATCAAGAAAGATCAGTGGTTACCGGATT
TTATACACCAGTGCAGATGGGACTGAAATCAATGAGGTGGAGGTCGATCCGATCACTACGTTTC
CTCTGAAAGGTTTGACGCCCCTCACCGAGTATTCCATTGCCATTTTCTCCATCTATGAAGAAGG
GCAGTCTTTGCCTCTGGTTGGAGTTTTCACCACAGAGGAAGTCCCAGCCCAGCAGTACTTGGAA
ATCGACGAGGTGAAGACAGACGGCTTTCGAGTGACCTGGCATCCCCTGTCTGCCGAGGAAGGGC
AACACAAGTTGATGTGGATTCCAGTCTACGGTGGGAAGACCGAAGAGGTTGACCTAAAGGAAGA
GCAGGATTCATATGTTATTGAGGGTCTGGAACCTGGCACTGAATATGAAGTCTCGCTGTTGGCC
GTACTTGATGATGGAAGTGAGAGTGAGGTGGTGACCGCTGTAGGGACCACACTTGATAGTTTTT
GGACAGAACCAGCCACAACCATAGTACCTACCAGCCCTGTAACTTCAGCTTTCCAGACAGGAAT
CAGAAACCTGGTTGTAGATGATGAAACCACTTCTAGTCTGCGGGTAACATGGGACATTTCTGAC
AGCAATGTGGAGCAGTTTAGGGTGACCTACCTGACAGCACAAGGGGACCCTGCGGAAGAAGTGG
TAGGAACGGTTATGGTGCCTGGGAGCCAGAACAATCTCCTTCTGAAGCCTCTCCTTCCAGATAC
CGAGTACAAAGTCACAGTGACTCCTATCTACACTGATGGAGAAGGTGTCAGCGTCTCTGCCCCT
GGAAGAACCTTGCCCTCCTCCGGTCCCCAGAACTTAAGGGTCTCAGAGGAATGGTATAACCGGT
TGCGCATCACCTGGGATCCTCCATCTGCCCCTGTAAAAGGCTATAGGATCCTCTACAAACCTGT
CAGTGTTCCTGGCCCAACCCTGGAGACTTTTGTGGGTGCTGACATTAACACCATTCTTATCACC
AACCTCCTCAGTGGAATGGACTACAACGTGAAGATATTCGCCTCCCAGGCGGCAGGCCACAGCG
ACGCGCTGACAGGCCTGGTGAAAACACTGTTCTTGGGTGTGACCAATCTCCAAGTCAGCCAGAT
TGAAATGACCAGCTTGTGTGCTCGATGGGAGGTGCATCGTCATGCCACGGCCTACAGGATAGTT
CTAGAACCCCTCCAGGATACCCAAAAGCAAGAATCTACTGTAGGAGGAGGTACAAATAGGCATT
GCTTCTATGGACTCCAGCCCGATTCAGAATATAAAATCAGTGTTTACACCAAGCTCCAGGAGAT
GGAGGGACCAAGTGTGAGCATAGTGGAAAAAACACTGTCACTTCCCACTCCACCACCAACCTTT
CCTCCAACCATTCCACCTGCAAAAGAAGTCTGTAAATCTGCGAAGGCGGACCTTGTGTTGATGG
TGGATGGGTCTTGGAGCATTGGAGACGATAATTTCAATAAGATCATCAACTTTTTGTATAGCAC
TGTTGCAGCCCTGGACAAGATTGGTGCAGATGGAACTCAGGTGGCCATGGTTCAATTCACTGAT
GACCCAAGAACAGAATTTAAACTAAATGCTTATAAAACCAAAGAGACTCTTCTAGATGCAATTA
AACACATTTCATACAAAGGAGGAAATACAAAGACGGGAAAAGCAATTAAGTATGTTCGAGATAC
TCTATTTACTGTTGAGTCAGGTACAAGAAGAGGCATCCCAAAAGTTATTGTGGTTATAACGGAT
GGAAGGTCACAAGATGATGTAAACAAAATCTCCAGGGAGATGCAAGCAGATGGCTATAACATTT
TTGCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTGGTTAGCATTGGCAGTAAGCCTAGTTC
ACGCCATGTCTTCTTTGTGGATGACTTTGACGCCTTTAAGAAAATCGAAGATGAATTAATTACT
TTTGTCTGTGAGACTGCATCAGCAACCTGCCCAATGGTGCACAAGGATGGTGTTGATCTTGCAG
GATTTAAGATGATGGAAATGTTTGGTTTGGTTGAAAAGGACTTCTCATCTGTGGAAGGGGTTTC
TATGGAGCCTGGTACCTTCAATGTGTATCCATGTTACCAACTTCACAGAGATGCCCTGGTATCC
CAGCCAACCAAGTATTTGCATCCAGAAGGATTGCCTTCTGATTACACAATCAGTTTTCTGTTCC
GGATTCTTCCTGACACTCCAGAGGAACCATTTGCTCTTTGGGAGATTTTAAATAAAAACTCTGA
TCCCCTGGTTGGAATTATTTTAGACAATGGTGGGAAAACTCTAACTTATTTCAACTATGACCAG
AGTGGGGATTTTCAAACCGTTACTTTTGAAGGACCTGAAATTAGGAAAATTTTCTATGGAAGTT
TTCACAAGCTACATGTTGTTGTCAGCAAGACTTTGGCCAAAGTGGTTGTCGACTGCAAGCAAGT
GGGCGAGAAGGCAATAAATGCATCTGCTAATATCACATCAGATGGAGTAGAAGTCCTAGGGAGA
ATGGTTAGATCAAGAGGACCAAGTGGAAATTCTGCACCATTCCAGTTACAGATGTTTGACATCA
TTTGCTCCACATCATGGGCCAGTAGGGACAAATGCTGTGAACTTCCAGGCCTGAGGGATGACGA
ATCCTGCCCAGACCTCCCACATTCCTGCTCCTGTTCTGAAACCAACGAAGTGGCTCTGGGACCG
GCTGGGCCACCAGGTGGTCCAGGACTCCGAGGACCCAAGGGCCAACAAGGTGAACAGGGCCCAA
AGGGACCGGATGGCCCTCGGGGTGAAACAGGCCCTCCAGGACCTCAGGGTCCCCCTGGCCCCCA
GGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGGATGCCAGGTGATAAAGGAGAGAAAGGA
GACACTGGCCTTCCCGGTCCACAGGGTATGCCAGGAAGTGTGGGTTCACCTGGACGTGATGGCT
CACCAGGCCAGAGGGGATTTCCTGGAAAGGATGGTTCCACTGGCCCTCCGGGACCACCAGGGCC
CATTGGCATTCCTGGAGCCCCTGGAGTCCCAGGGATCACAGGCAGCATGGGACCACAAGGTGCC
CTGGGGCCACCGGGTCTTCCTGGAGCAAAGGGTGAACGTGGAGAACGGGGTGACCTGCAGTCTC
AAGCCATGGTGAGGGCAGTGGCACGTCAAGTATGTGAACAGCTCATCCAGAGTCACATGGCCAG
GTACACAGCCATCCTCAACCAGATCCCCAGCCACTCCTCATCCATCCGGACTGTCCAAGGGCCT
CCTGGGGAACCTGGAAGGCCAGGCTCACCTGGAACCCCTGGTGAGCAAGGACCCCCAGGTGCAC
CCGGCTTCCCAGGAAATGCAGGTGTGCCAGGGGCCCCAGGAGAACGAGGTTTAACTGGTATCAA
GGGAGAGAAAGGAAATCCAGGCATTGGTACTCAAGGACCAAGAGGACCCCCTGGGCCAGCAGGA
CCTTCAGGGGAGAGTCGCCCTGGCAGCCCTGGACCCCCTGGCTCTCCTGGACCAAGGGGACCAC
CAGGTCACCTGGGGGTACCTGGACCACAAGGTCCTTCTGGCCAGCCTGGATATTGCGACCCCTC
GTCATGTTCTGCCTATGGTGCGGGAGCTCCCCATCCGGATCAGCCCGAATTCACTCCTGTCCAA
GATGAGAATGAAGCCATGGAACTGTGGGGCTCCGGGATCTGATGGCCTCAGGAGACATTTGAAG
ACCAACAGCAAGACCTCTTAAAGACCTTTATTCATGAAAATGTTAAGTGGTTTGTATGTTACTT
TGGGGGAGGGCCTCATATCTGCATCCCAAATTTCATTTTTGGATAACATTCATATTAGAGTTAT
TATTAACAAAAATCATGTTTTTTTTAAATTCACTTAATCTATGACAACATTAGAAATTATTTCC
CCTAGCTGTTTTAAGGATATGCCAGATAATTTGTGGTTTTTTTTTTTTTTTTGGAGAAAAGTCC
TCAAAGAAGAATTGAGAGAAAGTAGATTGAATTCTGGACTCTTTTCTCTGTGAGATGATCTCAA
ATTCTAAAATGCACAAGAGAAATATGATTGGGTTGGAGGGAAATGGGGCCCCCACAGAAAAAGA
ATGAATTCAAAGAGATTCACAGATTATAACATTTTCTCTGCCCCATGGGAATGACTTGCTAATA
AGAAGAAGGGTCATTGTTGGTGAAGCTACCTCTTACATAATTGATCTGTCCAACTCTAAGATTA
CTCAGTGACTGGTTTCACAGGTATCCAAAAATAAGTGCTAGAATATAACTTTAAATTGAATTTG
ATAATTTTAAACATAGATTGAGTTTTTCAATGGTTTTAGACTCATGTAAAATAATGATTTTTCA
CCAGCTCCAATGGAAAGTGATCTATCTTTGATGAAGGATTTGTTGGGCAGTATGTTCTAGGGCC
TTCCTCTCCTACAGGGATTACTTTATGCAGATAAGTTTTTGCAAATCTGTTTTTATTCTTTTTG
TAAGCAAATAAAAATTGAAAACAACA

hide sequence

RefSeq Acc Id:

XM_013357064 ⟹ XP_013212518

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,037,628 - 19,238,913 (-)	NCBI
HiC_Itri_2	NW_024405303	19,013,239 - 19,216,888 (-)	NCBI
SpeTri2.0	NW_004936470	26,440,606 - 26,643,015 (-)	NCBI

Sequence:

show sequence

ACAAGAAGAGGGAGAAAGGCTAATAGAAAAAAAATTTAAAAAGAAAAAAGAAAAAAAAAAAAAG
AGAGGGAAGCGAACAAGGAACCGTGCGTTGCGGTGCGCCACTGGGAACCAACTCCAGGAGGATC
TTCCTTAGTCGCCAAGAGGTTTCCAGCCTGGGCTGGAAGCTTGCCTTGCACAGGTCAGCTGCTA
CACCCCATGTAAAAGGCAGAAAATAAAATGAAGATTTTTCAGTGCAAGATGCGGTACTGGCTGA
TCCCAGCTTTTTTGGCAATTGCATATTTCTGCACTATCGTCCAGGGTCAAGTGGCTCCACCCAC
ACGGTTAAGGTATAATGTCTTATCTCAGGACAGTATACAGATTTCATGGAAGGCTCCAAGAGGG
AAATTTGGTGGATACAAACTTCTTGTGACTCCAGCTTCAGGAGGAAAAACCAATCAATTGAATC
TCCAGAACACTGCAACTAAAGCAATTATTCAAGGTCTTATGCCAGAGCAGAATTACACAGTTCA
ACTTATTGCATACCATAAAGACAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT
TTGGAAAAAAGAAAGGATCCAACAAAGCCCAGAGCCAAGGTTGTGGATAAAGGAAATGGGACGA
AACCCACTGTACCAGAAGTGAAATTTTTCTGTGAAACTCCAGCGATTGCTGATATTGTGATCTT
GGTTGATGGTTCTTGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCTTTTCTTGGAAAAC
TTGGTTACAGCGTTCAATGTGGGCTCAGAGAAGACACGAATTGGCCTTGCACAGTATAGTGGTG
ACCCCAGAATAGAATGGCACTTGAATGCCTTCAACACAAAAGATGAAGTGATTGAAGCTGTCCG
GAACCTTCCATACAAGGGAGGGAATACCCTAACAGGTCTTGCTTTGAGCTACATTTTTGAAAAT
AGCTTTAAACCAGAAGCAGGATCAAGGACTGGAGTTTCCAAAATTGGCATCTTAATCACAGATG
GAAAATCTCAAGATGATATTATTCCGCCATCTAGAAACCTTCGTGAGTCTGGTGTAGAACTGTT
TGCTATAGGGGTGAAAAACGCTGACCTGAACGAGCTGCAGGAGATCGCCTCGGAACCGGACAGC
ACGCACGTGTACAACGTTGCCGAATTCGATCTGATGCACACGGTGGTGGAGAGCCTGACGAGGA
CCGTGTGTTCCAGGGTGGAAGAACAGGACCGGGAAATTAAAGCCTCAGCCCTCACCACCATTGG
GCCACCTACAGAGTTGATTACTTCTGAAGTCACAGCCAGAAGCTTTATGGTTAACTGGACTCAT
GCCCCAGGAAAAGTGGAAAAATACAGAGTTGTGTATTATCCCACCAGAGGTGGAAAACCACAAG
AGGTGGTGGTGGATGGAAGCTTATCTTCCACAGTGTTGAAAAATTTGATGTCTTTGACTGAATA
TCAAGTAGCGGTATTTGCAATATATGCTCACACTGCTAGTGAAGGCCTGAGAGGAACTGAAACC
ACACTTGCTTTACCCATGGCTTCTGACCTTGAACTATACGATGTGACGGAAAACAGTTTGCGTG
TCAGATGGGACGCAGTTCCTGGGGCCACAGGATACCTGATCCTCTATGCTCCTCTCACAGAGGG
CCTGGCTGGGGATGAAAAAGAGATGAAAATTGGAGAGACCCACACAGACATTGAGTTAAGTGGG
TTGGTCCCCAATACGGAGTACACAGTCACAGTTTATGCCATGTTTGGGGAAGAGGCCAGTGATC
CTGCTACAGGACAAGAAACAACATTGCCTTTATCTCCACCAAGAAACCTGAGAATCTCCAATAT
TGGCTCTAACAGTGCTCGATTATCCTGGGACCCTACATCAAGAAAGATCAGTGGTTACCGGATT
TTATACACCAGTGCAGATGGGACTGAAATCAATGAGGTGGAGGTCGATCCGATCACTACGTTTC
CTCTGAAAGGTTTGACGCCCCTCACCGAGTATTCCATTGCCATTTTCTCCATCTATGAAGAAGG
GCAGTCTTTGCCTCTGGTTGGAGTTTTCACCACAGAGGAAGTCCCAGCCCAGCAGTACTTGGAA
ATCGACGAGGTGAAGACAGACGGCTTTCGAGTGACCTGGCATCCCCTGTCTGCCGAGGAAGGGC
AACACAAGTTGATGTGGATTCCAGTCTACGGTGGGAAGACCGAAGAGGTTGACCTAAAGGAAGA
GCAGGATTCATATGTTATTGAGGGTCTGGAACCTGGCACTGAATATGAAGTCTCGCTGTTGGCC
GTACTTGATGATGGAAGTGAGAGTGAGGTGGTGACCGCTGTAGGGACCACACTTGATAGTTTTT
GGACAGAACCAGCCACAACCATAGTACCTACCAGCCCTGTAACTTCAGCTTTCCAGACAGGAAT
CAGAAACCTGGTTGTAGATGATGAAACCACTTCTAGTCTGCGGGTAACATGGGACATTTCTGAC
AGCAATGTGGAGCAGTTTAGGGTGACCTACCTGACAGCACAAGGGGACCCTGCGGAAGAAGTGG
TTATGGTGCCTGGGAGCCAGAACAATCTCCTTCTGAAGCCTCTCCTTCCAGATACCGAGTACAA
AGTCACAGTGACTCCTATCTACACTGATGGAGAAGGTGTCAGCGTCTCTGCCCCTGGAAGAACC
TTGCCCTCCTCCGGTCCCCAGAACTTAAGGGTCTCAGAGGAATGGTATAACCGGTTGCGCATCA
CCTGGGATCCTCCATCTGCCCCTGTAAAAGGCTATAGGATCCTCTACAAACCTGTCAGTGTTCC
TGGCCCAACCCTGGAGACTTTTGTGGGTGCTGACATTAACACCATTCTTATCACCAACCTCCTC
AGTGGAATGGACTACAACGTGAAGATATTCGCCTCCCAGGCGGCAGGCCACAGCGACGCGCTGA
CAGGCCTGGTGAAAACACTGTTCTTGGGTGTGACCAATCTCCAAGTCAGCCAGATTGAAATGAC
CAGCTTGTGTGCTCGATGGGAGGTGCATCGTCATGCCACGGCCTACAGGATAGTTCTAGAACCC
CTCCAGGATACCCAAAAGCAAGAATCTACTGTAGGAGGAGGTACAAATAGGCATTGCTTCTATG
GACTCCAGCCCGATTCAGAATATAAAATCAGTGTTTACACCAAGCTCCAGGAGATGGAGGGACC
AAGTGTGAGCATAGTGGAAAAAACACTGTCACTTCCCACTCCACCACCAACCTTTCCTCCAACC
ATTCCACCTGCAAAAGAAGTCTGTAAATCTGCGAAGGCGGACCTTGTGTTGATGGTGGATGGGT
CTTGGAGCATTGGAGACGATAATTTCAATAAGATCATCAACTTTTTGTATAGCACTGTTGCAGC
CCTGGACAAGATTGGTGCAGATGGAACTCAGGTGGCCATGGTTCAATTCACTGATGACCCAAGA
ACAGAATTTAAACTAAATGCTTATAAAACCAAAGAGACTCTTCTAGATGCAATTAAACACATTT
CATACAAAGGAGGAAATACAAAGACGGGAAAAGCAATTAAGTATGTTCGAGATACTCTATTTAC
TGTTGAGTCAGGTACAAGAAGAGGCATCCCAAAAGTTATTGTGGTTATAACGGATGGAAGGTCA
CAAGATGATGTAAACAAAATCTCCAGGGAGATGCAAGCAGATGGCTATAACATTTTTGCAATTG
GTGTGGCCGATGCAGATTACTCGGAGTTGGTTAGCATTGGCAGTAAGCCTAGTTCACGCCATGT
CTTCTTTGTGGATGACTTTGACGCCTTTAAGAAAATCGAAGATGAATTAATTACTTTTGTCTGT
GAGACTGCATCAGCAACCTGCCCAATGGTGCACAAGGATGGTGTTGATCTTGCAGGATTTAAGA
TGATGGAAATGTTTGGTTTGGTTGAAAAGGACTTCTCATCTGTGGAAGGGGTTTCTATGGAGCC
TGGTACCTTCAATGTGTATCCATGTTACCAACTTCACAGAGATGCCCTGGTATCCCAGCCAACC
AAGTATTTGCATCCAGAAGGATTGCCTTCTGATTACACAATCAGTTTTCTGTTCCGGATTCTTC
CTGACACTCCAGAGGAACCATTTGCTCTTTGGGAGATTTTAAATAAAAACTCTGATCCCCTGGT
TGGAATTATTTTAGACAATGGTGGGAAAACTCTAACTTATTTCAACTATGACCAGAGTGGGGAT
TTTCAAACCGTTACTTTTGAAGGACCTGAAATTAGGAAAATTTTCTATGGAAGTTTTCACAAGC
TACATGTTGTTGTCAGCAAGACTTTGGCCAAAGTGGTTGTCGACTGCAAGCAAGTGGGCGAGAA
GGCAATAAATGCATCTGCTAATATCACATCAGATGGAGTAGAAGTCCTAGGGAGAATGGTTAGA
TCAAGAGGACCAAGTGGAAATTCTGCACCATTCCAGTTACAGATGTTTGACATCATTTGCTCCA
CATCATGGGCCAGTAGGGACAAATGCTGTGAACTTCCAGGCCTGAGGGATGACGAATCCTGCCC
AGACCTCCCACATTCCTGCTCCTGTTCTGAAACCAACGAAGTGGCTCTGGGACCGGCTGGGCCA
CCAGGTGGTCCAGGACTCCGAGGACCCAAGGGCCAACAAGGTGAACAGGGCCCAAAGGGACCGG
ATGGCCCTCGGGGTGAAACAGGCCCTCCAGGACCTCAGGGTCCCCCTGGCCCCCAGGGACCAAG
TGGTCTGTCCATTCAAGGAATGCCCGGGATGCCAGGTGATAAAGGAGAGAAAGGAGACACTGGC
CTTCCCGGTCCACAGGGTATGCCAGGAAGTGTGGGTTCACCTGGACGTGATGGCTCACCAGGCC
AGAGGGGATTTCCTGGAAAGGATGGTTCCACTGGCCCTCCGGGACCACCAGGGCCCATTGGCAT
TCCTGGAGCCCCTGGAGTCCCAGGGATCACAGGCAGCATGGGACCACAAGGTGCCCTGGGGCCA
CCGGGTCTTCCTGGAGCAAAGGGTGAACGTGGAGAACGGGGTGACCTGCAGTCTCAAGCCATGG
TGAGGGCAGTGGCACGTCAAGTATGTGAACAGCTCATCCAGAGTCACATGGCCAGGTACACAGC
CATCCTCAACCAGATCCCCAGCCACTCCTCATCCATCCGGACTGTCCAAGGGCCTCCTGGGGAA
CCTGGAAGGCCAGGCTCACCTGGAACCCCTGGTGAGCAAGGACCCCCAGGTGCACCCGGCTTCC
CAGGAAATGCAGGTGTGCCAGGGGCCCCAGGAGAACGAGGTTTAACTGGTATCAAGGGAGAGAA
AGGAAATCCAGGCATTGGTACTCAAGGACCAAGAGGACCCCCTGGGCCAGCAGGACCTTCAGGG
GAGAGTCGCCCTGGCAGCCCTGGACCCCCTGGCTCTCCTGGACCAAGGGGACCACCAGGTCACC
TGGGGGTACCTGGACCACAAGGTCCTTCTGGCCAGCCTGGATATTGCGACCCCTCGTCATGTTC
TGCCTATGGTGCGGGAGCTCCCCATCCGGATCAGCCCGAATTCACTCCTGTCCAAGATGAGAAT
GAAGCCATGGAACTGTGGGGCTCCGGGATCTGATGGCCTCAGGAGACATTTGAAGACCAACAGC
AAGACCTCTTAAAGACCTTTATTCATGAAAATGTTAAGTGGTTTGTATGTTACTTTGGGGGAGG
GCCTCATATCTGCATCCCAAATTTCATTTTTGGATAACATTCATATTAGAGTTATTATTAACAA
AAATCATGTTTTTTTTAAATTCACTTAATCTATGACAACATTAGAAATTATTTCCCCTAGCTGT
TTTAAGGATATGCCAGATAATTTGTGGTTTTTTTTTTTTTTTTGGAGAAAAGTCCTCAAAGAAG
AATTGAGAGAAAGTAGATTGAATTCTGGACTCTTTTCTCTGTGAGATGATCTCAAATTCTAAAA
TGCACAAGAGAAATATGATTGGGTTGGAGGGAAATGGGGCCCCCACAGAAAAAGAATGAATTCA
AAGAGATTCACAGATTATAACATTTTCTCTGCCCCATGGGAATGACTTGCTAATAAGAAGAAGG
GTCATTGTTGGTGAAGCTACCTCTTACATAATTGATCTGTCCAACTCTAAGATTACTCAGTGAC
TGGTTTCACAGGTATCCAAAAATAAGTGCTAGAATATAACTTTAAATTGAATTTGATAATTTTA
AACATAGATTGAGTTTTTCAATGGTTTTAGACTCATGTAAAATAATGATTTTTCACCAGCTCCA
ATGGAAAGTGATCTATCTTTGATGAAGGATTTGTTGGGCAGTATGTTCTAGGGCCTTCCTCTCC
TACAGGGATTACTTTATGCAGATAAGTTTTTGCAAATCTGTTTTTATTCTTTTTGTAAGCAAAT
AAAAATTGAAAACAACA

hide sequence

RefSeq Acc Id:

XM_013357067 ⟹ XP_013212521

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,038,777 - 19,238,913 (-)	NCBI
HiC_Itri_2	NW_024405303	19,015,657 - 19,216,888 (-)	NCBI
SpeTri2.0	NW_004936470	26,441,512 - 26,643,015 (-)	NCBI

Sequence:

show sequence

ACAAGAAGAGGGAGAAAGGCTAATAGAAAAAAAATTTAAAAAGAAAAAAGAAAAAAAAAAAAAG
AGAGGGAAGCGAACAAGGAACCGTGCGTTGCGGTGCGCCACTGGGAACCAACTCCAGGAGGATC
TTCCTTAGTCGCCAAGAGGTTTCCAGCCTGGGCTGGAAGCTTGCCTTGCACAGGTCAGCTGCTA
CACCCCATGTAAAAGGCAGAAAATAAAATGAAGATTTTTCAGTGCAAGATGCGGTACTGGCTGA
TCCCAGCTTTTTTGGCAATTGCATATTTCTGCACTATCGTCCAGGGTCAAGTGGCTCCACCCAC
ACGGTTAAGGTATAATGTCTTATCTCAGGACAGTATACAGATTTCATGGAAGGCTCCAAGAGGG
AAATTTGGTGGATACAAACTTCTTGTGACTCCAGCTTCAGGAGGAAAAACCAATCAATTGAATC
TCCAGAACACTGCAACTAAAGCAATTATTCAAGGTCTTATGCCAGAGCAGAATTACACAGTTCA
ACTTATTGCATACCATAAAGACAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT
TTGGAAAAAAGAAAGGATCCAACAAAGCCCAGAGCCAAGGTTGTGGATAAAGGAAATGGGACGA
AACCCACTGTACCAGAAGTGAAATTTTTCTGTGAAACTCCAGCGATTGCTGATATTGTGATCTT
GGTTGATGGTTCTTGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCTTTTCTTGGAAAAC
TTGGTTACAGCGTTCAATGTGGGCTCAGAGAAGACACGAATTGGCCTTGCACAGTATAGTGGTG
ACCCCAGAATAGAATGGCACTTGAATGCCTTCAACACAAAAGATGAAGTGATTGAAGCTGTCCG
GAACCTTCCATACAAGGGAGGGAATACCCTAACAGGTCTTGCTTTGAGCTACATTTTTGAAAAT
AGCTTTAAACCAGAAGCAGGATCAAGGACTGGAGTTTCCAAAATTGGCATCTTAATCACAGATG
GAAAATCTCAAGATGATATTATTCCGCCATCTAGAAACCTTCGTGAGTCTGGTGTAGAACTGTT
TGCTATAGGGGTGAAAAACGCTGACCTGAACGAGCTGCAGGAGATCGCCTCGGAACCGGACAGC
ACGCACGTGTACAACGTTGCCGAATTCGATCTGATGCACACGGTGGTGGAGAGCCTGACGAGGA
CCGTGTGTTCCAGGGTGGAAGAACAGGACCGGGAAATTAAAGCCTCAGCCCTCACCACCATTGG
GCCACCTACAGAGTTGATTACTTCTGAAGTCACAGCCAGAAGCTTTATGGTTAACTGGACTCAT
GCCCCAGGAAAAGTGGAAAAATACAGAGTTGTGTATTATCCCACCAGAGGTGGAAAACCACAAG
AGGTGGTGGTGGATGGAAGCTTATCTTCCACAGTGTTGAAAAATTTGATGTCTTTGACTGAATA
TCAAGTAGCGGTATTTGCAATATATGCTCACACTGCTAGTGAAGGCCTGAGAGGAACTGAAACC
ACACTTGCTTTACCCATGGCTTCTGACCTTGAACTATACGATGTGACGGAAAACAGTTTGCGTG
TCAGATGGGACGCAGTTCCTGGGGCCACAGGATACCTGATCCTCTATGCTCCTCTCACAGAGGG
CCTGGCTGGGGATGAAAAAGAGATGAAAATTGGAGAGACCCACACAGACATTGAGTTAAGTGGG
TTGGTCCCCAATACGGAGTACACAGTCACAGTTTATGCCATGTTTGGGGAAGAGGCCAGTGATC
CTGCTACAGGACAAGAAACAACATTGCCTTTATCTCCACCAAGAAACCTGAGAATCTCCAATAT
TGGCTCTAACAGTGCTCGATTATCCTGGGACCCTACATCAAGAAAGATCAGTGGTTACCGGATT
TTATACACCAGTGCAGATGGGACTGAAATCAATGAGGTGGAGGTCGATCCGATCACTACGTTTC
CTCTGAAAGGTTTGACGCCCCTCACCGAGTATTCCATTGCCATTTTCTCCATCTATGAAGAAGG
GCAGTCTTTGCCTCTGGTTGGAGTTTTCACCACAGAGGAAGTCCCAGCCCAGCAGTACTTGGAA
ATCGACGAGGTGAAGACAGACGGCTTTCGAGTGACCTGGCATCCCCTGTCTGCCGAGGAAGGGC
AACACAAGTTGATGTGGATTCCAGTCTACGGTGGGAAGACCGAAGAGGTTGACCTAAAGGAAGA
GCAGGATTCATATGTTATTGAGGGTCTGGAACCTGGCACTGAATATGAAGTCTCGCTGTTGGCC
GTACTTGATGATGGAAGTGAGAGTGAGGTGGTGACCGCTGTAGGGACCACACTTGATAGTTTTT
GGACAGAACCAGCCACAACCATAGTACCTACCAGCCCTGTAACTTCAGCTTTCCAGACAGGAAT
CAGAAACCTGGTTGTAGATGATGAAACCACTTCTAGTCTGCGGGTAACATGGGACATTTCTGAC
AGCAATGTGGAGCAGTTTAGGGTGACCTACCTGACAGCACAAGGGGACCCTGCGGAAGAAGTGG
TAGGAACGGTTATGGTGCCTGGGAGCCAGAACAATCTCCTTCTGAAGCCTCTCCTTCCAGATAC
CGAGTACAAAGTCACAGTGACTCCTATCTACACTGATGGAGAAGGTGTCAGCGTCTCTGCCCCT
GGAAGAACCTTGCCCTCCTCCGGTCCCCAGAACTTAAGGGTCTCAGAGGAATGGTATAACCGGT
TGCGCATCACCTGGGATCCTCCATCTGCCCCTGTAAAAGGCTATAGGATCCTCTACAAACCTGT
CAGTGTTCCTGGCCCAACCCTGGAGACTTTTGTGGGTGCTGACATTAACACCATTCTTATCACC
AACCTCCTCAGTGGAATGGACTACAACGTGAAGATATTCGCCTCCCAGGCGGCAGGCCACAGCG
ACGCGCTGACAGGCCTGGTGAAAACACTGTTCTTGGGTGTGACCAATCTCCAAGTCAGCCAGAT
TGAAATGACCAGCTTGTGTGCTCGATGGGAGGTGCATCGTCATGCCACGGCCTACAGGATAGTT
CTAGAACCCCTCCAGGATACCCAAAAGCAAGAATCTACTGTAGGAGGAGGTACAAATAGGCATT
GCTTCTATGGACTCCAGCCCGATTCAGAATATAAAATCAGTGTTTACACCAAGCTCCAGGAGAT
GGAGGGACCAAGTGTGAGCATAGTGGAAAAAACACTGTCACTTCCCACTCCACCACCAACCTTT
CCTCCAACCATTCCACCTGCAAAAGAAGTCTGTAAATCTGCGAAGGCGGACCTTGTGTTGATGG
TGGATGGGTCTTGGAGCATTGGAGACGATAATTTCAATAAGATCATCAACTTTTTGTATAGCAC
TGTTGCAGCCCTGGACAAGATTGGTGCAGATGGAACTCAGGTGGCCATGGTTCAATTCACTGAT
GACCCAAGAACAGAATTTAAACTAAATGCTTATAAAACCAAAGAGACTCTTCTAGATGCAATTA
AACACATTTCATACAAAGGAGGAAATACAAAGACGGGAAAAGCAATTAAGTATGTTCGAGATAC
TCTATTTACTGTTGAGTCAGGTACAAGAAGAGGCATCCCAAAAGTTATTGTGGTTATAACGGAT
GGAAGGTCACAAGATGATGTAAACAAAATCTCCAGGGAGATGCAAGCAGATGGCTATAACATTT
TTGCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTGGTTAGCATTGGCAGTAAGCCTAGTTC
ACGCCATGTCTTCTTTGTGGATGACTTTGACGCCTTTAAGAAAATCGAAGATGAATTAATTACT
TTTGTCTGTGAGACTGCATCAGCAACCTGCCCAATGGTGCACAAGGATGGTGTTGATCTTGCAG
GATTTAAGATGATGGAAATGTTTGGTTTGGTTGAAAAGGACTTCTCATCTGTGGAAGGGGTTTC
TATGGAGCCTGGTACCTTCAATGTGTATCCATGTTACCAACTTCACAGAGATGCCCTGGTATCC
CAGCCAACCAAGTATTTGCATCCAGAAGGATTGCCTTCTGATTACACAATCAGTTTTCTGTTCC
GGATTCTTCCTGACACTCCAGAGGAACCATTTGCTCTTTGGGAGATTTTAAATAAAAACTCTGA
TCCCCTGGTTGGAATTATTTTAGACAATGGTGGGAAAACTCTAACTTATTTCAACTATGACCAG
AGTGGGGATTTTCAAACCGTTACTTTTGAAGGACCTGAAATTAGGAAAATTTTCTATGGAAGTT
TTCACAAGCTACATGTTGTTGTCAGCAAGACTTTGGCCAAAGTGGTTGTCGACTGCAAGCAAGT
GGGCGAGAAGGCAATAAATGCATCTGCTAATATCACATCAGATGGAGTAGAAGTCCTAGGGAGA
ATGGTTAGATCAAGAGGACCAAGTGGAAATTCTGCACCATTCCAGTTACAGATGTTTGACATCA
TTTGCTCCACATCATGGGCCAGTAGGGACAAATGCTGTGAACTTCCAGGCCTGAGGGATGACGA
ATCCTGCCCAGACCTCCCACATTCCTGCTCCTGTTCTGAAACCAACGAAGTGGCTCTGGGACCG
GCTGGGCCACCAGGTGGTCCAGGACTCCGAGGACCCAAGGGCCAACAAGGTGAACAGGGCCCAA
AGGGACCGGATGGCCCTCGGGGTGAAACAGGCCCTCCAGGACCTCAGGGTCCCCCTGGCCCCCA
GGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGGATGCCAGGTGATAAAGGAGAGAAAGGA
GACACTGGCCTTCCCGGTCCACAGGGTATGCCAGGAAGTGTGGGTTCACCTGGACGTGATGGCT
CACCAGGCCAGAGGGGATTTCCTGGAAAGGATGGTTCCACTGGCCCTCCGGGACCACCAGGGCC
CATTGGCATTCCTGGAGCCCCTGGAGTCCCAGGGATCACAGGCAGCATGGGACCACAAGGTGCC
CTGGGGCCACCGGGTCTTCCTGGAGCAAAGGGTGAACGTGGAGAACGGGGTGACCTGCAGTCTC
AAGCCATGGTGAGGGCAGTGGCACGTCAAGTATGTGAACAGCTCATCCAGAGTCACATGGCCAG
GTACACAGCCATCCTCAACCAGATCCCCAGCCACTCCTCATCCATCCGGACTGTCCAAGGGCCT
CCTGGGGAACCTGGAAGGCCAGGCTCACCTGGAACCCCTGGTGAGCAAGGACCCCCAGGTGCAC
CCGGCTTCCCAGGAAATGCAGGTGTGCCAGGGGCCCCAGGAGAACGAGGTTTAACTGGTATCAA
GGGAGAGAAAGGAAATCCAGGCATTGGTACTCAAGGACCAAGAGGACCCCCTGGGCCAGCAGGA
CCTTCAGGGGAGAGTCGCCCTGGCAGCCCTGGACCCCCTGGCTCTCCTGGACCAAGGGGACCAC
CAGGTCACCTGGGGGTACCTGGACCACAAGGTCCTTCTGGCCAGCCTGGATATTGCGACCCCTC
GTCATGTTCTGCCTATGGTGCGGGAGATCTGATCCCTTACAATGATTACCAGCACTAAAATGGA
AATCCTCCACTCTGGCTATATTGGCCTGGGCATTTGGCTATGAATACAGAACTGTCCTGTTGAC
CACCACCATTAAGCCCCAACCCCTAACAATGGATACTCCCTTTTCCTGGCTCACCTGCTTCCCT
TCCTTCCTACTTGGACATCCCTTGCTCTCTCTTCTCCAAACGTAATAGGAATGATAACATTGGA
ACTTAACCCAATCATATATGTCAATTGTAAAGGAAACTGGCTGTTTTAGGTCAGCCTGGATAGA
GGGATCTGATTGTGTACCAAGGATTCATCCCAAATTCTTCTATGCAAAGGCTTTGTAATAAAGT
TACTTACTGTGCCTTCTCCTCTTTCCTGACCCTGCCCAAGATGGATGAGCATCTTTCTCTCTGA
CCTCTCCACTCTTCCTTCCTCCCCCCATCACTTCCCCTCCCCACTCATCCTGGTGATGGACTTC
TAACATGAGATTGGTTTTTAAAATTTATTTTTTTTTGTTCATAATTCTGCTACATGTTCAGGGT
TTCTTTTGTAAATAAAACATATAATATTTAAGCACTTGGCTCTGAGTCTAGTTTTCTAACAATT
TCTCTAACATATCCTCTGGTTCCTCCTTTTACTAACCGGGAAACCTCATGGGGAAGGTACAAGA
GGCATGGTGGGTTAGGCAGCTACAGCTTTCTACCCAAGCAGGATATCTCTGTAGTTTACTGACC
AAATCTCTCTCTCTAAGGACCCCTCTGAGGGGAGAATATCAGTTCATGGTTCCTGGGTCCTATC
AAGTCCCCACCCCCACTTT

hide sequence

RefSeq Acc Id:

XM_013357075 ⟹ XP_013212529

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,038,777 - 19,238,914 (-)	NCBI
HiC_Itri_2	NW_024405303	19,015,657 - 19,216,888 (-)	NCBI
SpeTri2.0	NW_004936470	26,441,511 - 26,643,015 (-)	NCBI

Sequence:

show sequence

ACAAGAAGAGGGAGAAAGGCTAATAGAAAAAAAATTTAAAAAGAAAAAAGAAAAAAAAAAAAAG
AGAGGGAAGCGAACAAGGAACCGTGCGTTGCGGTGCGCCACTGGGAACCAACTCCAGGAGGATC
TTCCTTAGTCGCCAAGAGGTTTCCAGCCTGGGCTGGAAGCTTGCCTTGCACAGGTCAGCTGCTA
CACCCCATGTAAAAGGCAGAAAATAAAATGAAGATTTTTCAGTGCAAGATGCGGTACTGGCTGA
TCCCAGCTTTTTTGGCAATTGCATATTTCTGCACTATCGTCCAGGGTCAAGTGGCTCCACCCAC
ACGGTTAAGGTATAATGTCTTATCTCAGGACAGTATACAGATTTCATGGAAGGCTCCAAGAGGG
AAATTTGGTGGATACAAACTTCTTGTGACTCCAGCTTCAGGAGGAAAAACCAATCAATTGAATC
TCCAGAACACTGCAACTAAAGCAATTATTCAAGGTCTTATGCCAGAGCAGAATTACACAGTTCA
ACTTATTGCATACCATAAAGACAAAGAAAGCAAGCCAGCTCAAGGCCAATTCAGAATTAAAGAT
TTGGAAAAAAGAAAGGATCCAACAAAGCCCAGAGCCAAGGTTGTGGATAAAGGAAATGGGACGA
AACCCACTGTACCAGAAGTGAAATTTTTCTGTGAAACTCCAGCGATTGCTGATATTGTGATCTT
GGTTGATGGTTCTTGGAGTATTGGAAGATTCAACTTCAGACTGGTTCGGCTTTTCTTGGAAAAC
TTGGTTACAGCGTTCAATGTGGGCTCAGAGAAGACACGAATTGGCCTTGCACAGTATAGTGGTG
ACCCCAGAATAGAATGGCACTTGAATGCCTTCAACACAAAAGATGAAGTGATTGAAGCTGTCCG
GAACCTTCCATACAAGGGAGGGAATACCCTAACAGGTCTTGCTTTGAGCTACATTTTTGAAAAT
AGCTTTAAACCAGAAGCAGGATCAAGGACTGGAGTTTCCAAAATTGGCATCTTAATCACAGATG
GAAAATCTCAAGATGATATTATTCCGCCATCTAGAAACCTTCGTGAGTCTGGTGTAGAACTGTT
TGCTATAGGGGTGAAAAACGCTGACCTGAACGAGCTGCAGGAGATCGCCTCGGAACCGGACAGC
ACGCACGTGTACAACGTTGCCGAATTCGATCTGATGCACACGGTGGTGGAGAGCCTGACGAGGA
CCGTGTGTTCCAGGGTGGAAGAACAGGACCGGGAAATTAAAGCCTCAGCCCTCACCACCATTGG
GCCACCTACAGAGTTGATTACTTCTGAAGTCACAGCCAGAAGCTTTATGGTTAACTGGACTCAT
GCCCCAGGAAAAGTGGAAAAATACAGAGTTGTGTATTATCCCACCAGAGGTGGAAAACCACAAG
AGGTGGTGGTGGATGGAAGCTTATCTTCCACAGTGTTGAAAAATTTGATGTCTTTGACTGAATA
TCAAGTAGCGGTATTTGCAATATATGCTCACACTGCTAGTGAAGGCCTGAGAGGAACTGAAACC
ACACTTGCTTTACCCATGGCTTCTGACCTTGAACTATACGATGTGACGGAAAACAGTTTGCGTG
TCAGATGGGACGCAGTTCCTGGGGCCACAGGATACCTGATCCTCTATGCTCCTCTCACAGAGGG
CCTGGCTGGGGATGAAAAAGAGATGAAAATTGGAGAGACCCACACAGACATTGAGTTAAGTGGG
TTGGTCCCCAATACGGAGTACACAGTCACAGTTTATGCCATGTTTGGGGAAGAGGCCAGTGATC
CTGCTACAGGACAAGAAACAACATTGCCTTTATCTCCACCAAGAAACCTGAGAATCTCCAATAT
TGGCTCTAACAGTGCTCGATTATCCTGGGACCCTACATCAAGAAAGATCAGTGGTTACCGGATT
TTATACACCAGTGCAGATGGGACTGAAATCAATGAGGTGGAGGTCGATCCGATCACTACGTTTC
CTCTGAAAGGTTTGACGCCCCTCACCGAGTATTCCATTGCCATTTTCTCCATCTATGAAGAAGG
GCAGTCTTTGCCTCTGGTTGGAGTTTTCACCACAGAGGAAGTCCCAGCCCAGCAGTACTTGGAA
ATCGACGAGGTGAAGACAGACGGCTTTCGAGTGACCTGGCATCCCCTGTCTGCCGAGGAAGGGC
AACACAAGTTGATGTGGATTCCAGTCTACGGTGGGAAGACCGAAGAGGTTGACCTAAAGGAAGA
GCAGGATTCATATGTTATTGAGGGTCTGGAACCTGGCACTGAATATGAAGTCTCGCTGTTGGCC
GTACTTGATGATGGAAGTGAGAGTGAGGTGGTGACCGCTGTAGGGACCACACTTGATAGTTTTT
GGACAGAACCAGCCACAACCATAGTACCTACCAGCCCTGTAACTTCAGCTTTCCAGACAGGAAT
CAGAAACCTGGTTGTAGATGATGAAACCACTTCTAGTCTGCGGGTAACATGGGACATTTCTGAC
AGCAATGTGGAGCAGTTTAGGGTGACCTACCTGACAGCACAAGGGGACCCTGCGGAAGAAGTGG
TAGGAACGGTTATGGTGCCTGGGAGCCAGAACAATCTCCTTCTGAAGCCTCTCCTTCCAGATAC
CGAGTACAAAGTCACAGTGACTCCTATCTACACTGATGGAGAAGGTGTCAGCGTCTCTGCCCCT
GGAAGAACCTTGCCCTCCTCCGGTCCCCAGAACTTAAGGGTCTCAGAGGAATGGTATAACCGGT
TGCGCATCACCTGGGATCCTCCATCTGCCCCTGTAAAAGGCTATAGGATCCTCTACAAACCTGT
CAGTGTTCCTGGCCCAACCCTGGAGACTTTTGTGGGTGCTGACATTAACACCATTCTTATCACC
AACCTCCTCAGTGGAATGGACTACAACGTGAAGATATTCGCCTCCCAGGCGGCAGGCCACAGCG
ACGCGCTGACAGGCCTGGTGAAAACACTGTTCTTGGGTGTGACCAATCTCCAAGTCAGCCAGAT
TGAAATGACCAGCTTGTGTGCTCGATGGGAGGTGCATCGTCATGCCACGGCCTACAGGATAGTT
CTAGAACCCCTCCAGGATACCCAAAAGCAAGAATCTACTGTAGGAGGAGGTACAAATAGGCATT
GCTTCTATGGACTCCAGCCCGATTCAGAATATAAAATCAGTGTTTACACCAAGCTCCAGGAGAT
GGAGGGACCAAGTGTGAGCATAGTGGAAAAAACACTGTCACTTCCCACTCCACCACCAACCTTT
CCTCCAACCATTCCACCTGCAAAAGAAGTCTGTAAATCTGCGAAGGCGGACCTTGTGTTGATGG
TGGATGGGTCTTGGAGCATTGGAGACGATAATTTCAATAAGATCATCAACTTTTTGTATAGCAC
TGTTGCAGCCCTGGACAAGATTGGTGCAGATGGAACTCAGGTGGCCATGGTTCAATTCACTGAT
GACCCAAGAACAGAATTTAAACTAAATGCTTATAAAACCAAAGAGACTCTTCTAGATGCAATTA
AACACATTTCATACAAAGGAGGAAATACAAAGACGGGAAAAGCAATTAAGTATGTTCGAGATAC
TCTATTTACTGTTGAGTCAGGTACAAGAAGAGGCATCCCAAAAGTTATTGTGGTTATAACGGAT
GGAAGGTCACAAGATGATGTAAACAAAATCTCCAGGGAGATGCAAGCAGATGGCTATAACATTT
TTGCAATTGGTGTGGCCGATGCAGATTACTCGGAGTTGGTTAGCATTGGCAGTAAGCCTAGTTC
ACGCCATGTCTTCTTTGTGGATGACTTTGACGCCTTTAAGAAAATCGAAGATGAATTAATTACT
TTTGTCTGTGAGACTGCATCAGCAACCTGCCCAATGGTGCACAAGGATGGTGTTGATCTTGCAG
GATTTAAGATGATGGAAATGTTTGGTTTGGTTGAAAAGGACTTCTCATCTGTGGAAGGGGTTTC
TATGGAGCCTGGTACCTTCAATGTGTATCCATGTTACCAACTTCACAGAGATGCCCTGGTATCC
CAGCCAACCAAGTATTTGCATCCAGAAGGATTGCCTTCTGATTACACAATCAGTTTTCTGTTCC
GGATTCTTCCTGACACTCCAGAGGAACCATTTGCTCTTTGGGAGATTTTAAATAAAAACTCTGA
TCCCCTGGTTGGAATTATTTTAGACAATGGTGGGAAAACTCTAACTTATTTCAACTATGACCAG
AGTGGGGATTTTCAAACCGTTACTTTTGAAGGACCTGAAATTAGGAAAATTTTCTATGGAAGTT
TTCACAAGCTACATGTTGTTGTCAGCAAGACTTTGGCCAAAGTGGTTGTCGACTGCAAGCAAGT
GGGCGAGAAGGCAATAAATGCATCTGCTAATATCACATCAGATGGAGTAGAAGTCCTAGGGAGA
ATGGTTAGATCAAGAGGACCAAGTGGAAATTCTGCACCATTCCAGTTACAGATGTTTGACATCA
TTTGCTCCACATCATGGGCCAGTAGGGACAAATGCTGTGAACTTCCAGGCCTGAGGGATGACGA
ATCCTGCCCAGACCTCCCACATTCCTGCTCCTGTTCTGAAACCAACGAAGTGGCTCTGGGACCG
GCTGGGCCACCAGGTGGTCCAGGACTCCGAGGACCCAAGGGCCAACAAGGTGAACAGGGCCCAA
AGGGACCGGATGGCCCTCGGGGTGAAACAGGCCCTCCAGGACCTCAGGGTCCCCCTGGCCCCCA
GGGACCAAGTGGTCTGTCCATTCAAGGAATGCCCGGGATGCCAGGTGATAAAGGAGAGAAAGGA
GACACTGGCCTTCCCGGTCCACAGGGTATGCCAGGAAGTGTGGGTTCACCTGGACGTGATGGCT
CACCAGGCCAGAGGGGATTTCCTGGAAAGGATGGTTCCACTGGCCCTCCGGGACCACCAGGGCC
CATTGGCATTCCTGGAGCCCCTGGAGTCCCAGGGATCACAGGCAGCATGGGACCACAAGGTGCC
CTGGGGCCACCGGGTCTTCCTGGAGCAAAGGGTGAACGTGGAGAACGGGGTGACCTGCAGTCTC
AAGCCATGGTGAGGGCAGTGGCACGTCAAGTATGTGAACAGCTCATCCAGAGTCACATGGCCAG
GTACACAGCCATCCTCAACCAGATCCCCAGCCACTCCTCATCCATCCGGACTGTCCAAGGGCCT
CCTGGGGAACCTGGAAGGCCAGGCTCACCTGGAACCCCTGGTGAGCAAGGACCCCCAGGTGCAC
CCGGCTTCCCAGGAAATGCAGGTGTGCCAGGGGCCCCAGGAGAACGAGGTTTAACTGGTATCAA
GGGAGAGAAAGGAAATCCAGGCATTGGTACTCAAGGACCAAGAGGACCCCCTGGGCCAGCAGGA
CCTTCAGGGGAGAGTCGCCCTGGCAGCCCTGGACCCCCTGGCTCTCCTGGACCAAGGGGACCAC
CAGGTCACCTGGGGGTACCTGGACCACAAGGTCCTTCTGGCCAGCCTGGATATTGCGACCCCTC
GTCATGTTCTGCCTATGGTGCGGGAGGTGACCAAGGATAGTCTTAAGAAGAAACAAATCTGGCC
ATGCTGTCTTAGCCTCATCACTAACTACTGGACCAAGATTCTGAAATATTATGCTTCCTAAAAA
CATCTGCAGTGCATGCTGATGTGCTGGGGGGAGGGGAGGCTTTCTGACATAATTATTCTTGGAA
GTTCAGGAGAGAGGTTCCGAGATGGCTCTGGGGCAAAAGGACTTTTTAGTCAATGAATTTAAAT
TTTCTGCTTTAGGAGAAATTTAACCTTAGATGCCAGAGGCATTGGTCAAAGTTTTGCTGATGTG
TTTTTCTCTGTTCATCTTTTCCCTCCCCATTCTCTCATATTCCCCTGTCCCTTATTAAGATCTG
ATCCCTTACAATGATTACCAGCACTAAAATGGAAATCCTCCACTCTGGCTATATTGGCCTGGGC
ATTTGGCTATGAATACAGAACTGTCCTGTTGACCACCACCATTAAGCCCCAACCCCTAACAATG
GATACTCCCTTTTCCTGGCTCACCTGCTTCCCTTCCTTCCTACTTGGACATCCCTTGCTCTCTC
TTCTCCAAACGTAATAGGAATGATAACATTGGAACTTAACCCAATCATATATGTCAATTGTAAA
GGAAACTGGCTGTTTTAGGTCAGCCTGGATAGAGGGATCTGATTGTGTACCAAGGATTCATCCC
AAATTCTTCTATGCAAAGGCTTTGTAATAAAGTTACTTACTGTGCCTTCTCCTCTTTCCTGACC
CTGCCCAAGATGGATGAGCATCTTTCTCTCTGACCTCTCCACTCTTCCTTCCTCCCCCCATCAC
TTCCCCTCCCCACTCATCCTGGTGATGGACTTCTAACATGAGATTGGTTTTTAAAATTTATTTT
TTTTTGTTCATAATTCTGCTACATGTTCAGGGTTTCTTTTGTAAATAAAACATATAATATTTAA
GCACTTGGCTCTGAGTCTAGTTTTCTAACAATTTCTCTAACATATCCTCTGGTTCCTCCTTTTA
CTAACCGGGAAACCTCATGGGGAAGGTACAAGAGGCATGGTGGGTTAGGCAGCTACAGCTTTCT
ACCCAAGCAGGATATCTCTGTAGTTTACTGACCAAATCTCTCTCTCTAAGGACCCCTCTGAGGG
GAGAATATCAGTTCATGGTTCCTGGGTCCTATCAAGTCCCCACCCCCACTTTT

hide sequence

RefSeq Acc Id:

XM_078016743 ⟹ XP_077872869

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,038,478 - 19,238,914 (-)	NCBI

RefSeq Acc Id:

XM_078016744 ⟹ XP_077872870

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,037,628 - 19,238,913 (-)	NCBI

RefSeq Acc Id:

XM_078016745 ⟹ XP_077872871

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
mIctTri1.hap1	7	19,037,628 - 19,148,758 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013212512	(Get FASTA)	NCBI Sequence Viewer
	XP_013212518	(Get FASTA)	NCBI Sequence Viewer
	XP_013212521	(Get FASTA)	NCBI Sequence Viewer
	XP_013212529	(Get FASTA)	NCBI Sequence Viewer
	XP_077872869	(Get FASTA)	NCBI Sequence Viewer
	XP_077872870	(Get FASTA)	NCBI Sequence Viewer
	XP_077872871	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000022588.2
GenBank Protein	KAG3273669	(Get FASTA)	NCBI Sequence Viewer
	KAG3273670	(Get FASTA)	NCBI Sequence Viewer
	KAG3273671	(Get FASTA)	NCBI Sequence Viewer
	KAG3273672	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013212518 ⟸ XM_013357064
- Peptide Label:	isoform X2
- UniProtKB:	I3NDZ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKIFQCKMRYWLIPAFLAIAYFCTIVQGQVAPPTRLRYNVLSQDSIQISWKAPRGKFGGYKLLV TPASGGKTNQLNLQNTATKAIIQGLMPEQNYTVQLIAYHKDKESKPAQGQFRIKDLEKRKDPTK PRAKVVDKGNGTKPTVPEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRLFLENLVTAFNVGS EKTRIGLAQYSGDPRIEWHLNAFNTKDEVIEAVRNLPYKGGNTLTGLALSYIFENSFKPEAGSR TGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADLNELQEIASEPDSTHVYNVAEF DLMHTVVESLTRTVCSRVEEQDREIKASALTTIGPPTELITSEVTARSFMVNWTHAPGKVEKYR VVYYPTRGGKPQEVVVDGSLSSTVLKNLMSLTEYQVAVFAIYAHTASEGLRGTETTLALPMASD LELYDVTENSLRVRWDAVPGATGYLILYAPLTEGLAGDEKEMKIGETHTDIELSGLVPNTEYTV TVYAMFGEEASDPATGQETTLPLSPPRNLRISNIGSNSARLSWDPTSRKISGYRILYTSADGTE INEVEVDPITTFPLKGLTPLTEYSIAIFSIYEEGQSLPLVGVFTTEEVPAQQYLEIDEVKTDGF RVTWHPLSAEEGQHKLMWIPVYGGKTEEVDLKEEQDSYVIEGLEPGTEYEVSLLAVLDDGSESE VVTAVGTTLDSFWTEPATTIVPTSPVTSAFQTGIRNLVVDDETTSSLRVTWDISDSNVEQFRVT YLTAQGDPAEEVVMVPGSQNNLLLKPLLPDTEYKVTVTPIYTDGEGVSVSAPGRTLPSSGPQNL RVSEEWYNRLRITWDPPSAPVKGYRILYKPVSVPGPTLETFVGADINTILITNLLSGMDYNVKI FASQAAGHSDALTGLVKTLFLGVTNLQVSQIEMTSLCARWEVHRHATAYRIVLEPLQDTQKQES TVGGGTNRHCFYGLQPDSEYKISVYTKLQEMEGPSVSIVEKTLSLPTPPPTFPPTIPPAKEVCK SAKADLVLMVDGSWSIGDDNFNKIINFLYSTVAALDKIGADGTQVAMVQFTDDPRTEFKLNAYK TKETLLDAIKHISYKGGNTKTGKAIKYVRDTLFTVESGTRRGIPKVIVVITDGRSQDDVNKISR EMQADGYNIFAIGVADADYSELVSIGSKPSSRHVFFVDDFDAFKKIEDELITFVCETASATCPM VHKDGVDLAGFKMMEMFGLVEKDFSSVEGVSMEPGTFNVYPCYQLHRDALVSQPTKYLHPEGLP SDYTISFLFRILPDTPEEPFALWEILNKNSDPLVGIILDNGGKTLTYFNYDQSGDFQTVTFEGP EIRKIFYGSFHKLHVVVSKTLAKVVVDCKQVGEKAINASANITSDGVEVLGRMVRSRGPSGNSA PFQLQMFDIICSTSWASRDKCCELPGLRDDESCPDLPHSCSCSETNEVALGPAGPPGGPGLRGP KGQQGEQGPKGPDGPRGETGPPGPQGPPGPQGPSGLSIQGMPGMPGDKGEKGDTGLPGPQGMPG SVGSPGRDGSPGQRGFPGKDGSTGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGLPGAKGE RGERGDLQSQAMVRAVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGSPGT PGEQGPPGAPGFPGNAGVPGAPGERGLTGIKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGP PGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCSAYGAGAPHPDQPEFTPVQDENEAMELWGSG I hide sequence

RefSeq Acc Id:	XP_013212512 ⟸ XM_013357058
- Peptide Label:	isoform X1
- UniProtKB:	I3NDZ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKIFQCKMRYWLIPAFLAIAYFCTIVQGQVAPPTRLRYNVLSQDSIQISWKAPRGKFGGYKLLV TPASGGKTNQLNLQNTATKAIIQGLMPEQNYTVQLIAYHKDKESKPAQGQFRIKDLEKRKDPTK PRAKVVDKGNGTKPTVPEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRLFLENLVTAFNVGS EKTRIGLAQYSGDPRIEWHLNAFNTKDEVIEAVRNLPYKGGNTLTGLALSYIFENSFKPEAGSR TGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADLNELQEIASEPDSTHVYNVAEF DLMHTVVESLTRTVCSRVEEQDREIKASALTTIGPPTELITSEVTARSFMVNWTHAPGKVEKYR VVYYPTRGGKPQEVVVDGSLSSTVLKNLMSLTEYQVAVFAIYAHTASEGLRGTETTLALPMASD LELYDVTENSLRVRWDAVPGATGYLILYAPLTEGLAGDEKEMKIGETHTDIELSGLVPNTEYTV TVYAMFGEEASDPATGQETTLPLSPPRNLRISNIGSNSARLSWDPTSRKISGYRILYTSADGTE INEVEVDPITTFPLKGLTPLTEYSIAIFSIYEEGQSLPLVGVFTTEEVPAQQYLEIDEVKTDGF RVTWHPLSAEEGQHKLMWIPVYGGKTEEVDLKEEQDSYVIEGLEPGTEYEVSLLAVLDDGSESE VVTAVGTTLDSFWTEPATTIVPTSPVTSAFQTGIRNLVVDDETTSSLRVTWDISDSNVEQFRVT YLTAQGDPAEEVVGTVMVPGSQNNLLLKPLLPDTEYKVTVTPIYTDGEGVSVSAPGRTLPSSGP QNLRVSEEWYNRLRITWDPPSAPVKGYRILYKPVSVPGPTLETFVGADINTILITNLLSGMDYN VKIFASQAAGHSDALTGLVKTLFLGVTNLQVSQIEMTSLCARWEVHRHATAYRIVLEPLQDTQK QESTVGGGTNRHCFYGLQPDSEYKISVYTKLQEMEGPSVSIVEKTLSLPTPPPTFPPTIPPAKE VCKSAKADLVLMVDGSWSIGDDNFNKIINFLYSTVAALDKIGADGTQVAMVQFTDDPRTEFKLN AYKTKETLLDAIKHISYKGGNTKTGKAIKYVRDTLFTVESGTRRGIPKVIVVITDGRSQDDVNK ISREMQADGYNIFAIGVADADYSELVSIGSKPSSRHVFFVDDFDAFKKIEDELITFVCETASAT CPMVHKDGVDLAGFKMMEMFGLVEKDFSSVEGVSMEPGTFNVYPCYQLHRDALVSQPTKYLHPE GLPSDYTISFLFRILPDTPEEPFALWEILNKNSDPLVGIILDNGGKTLTYFNYDQSGDFQTVTF EGPEIRKIFYGSFHKLHVVVSKTLAKVVVDCKQVGEKAINASANITSDGVEVLGRMVRSRGPSG NSAPFQLQMFDIICSTSWASRDKCCELPGLRDDESCPDLPHSCSCSETNEVALGPAGPPGGPGL RGPKGQQGEQGPKGPDGPRGETGPPGPQGPPGPQGPSGLSIQGMPGMPGDKGEKGDTGLPGPQG MPGSVGSPGRDGSPGQRGFPGKDGSTGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGLPGA KGERGERGDLQSQAMVRAVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGS PGTPGEQGPPGAPGFPGNAGVPGAPGERGLTGIKGEKGNPGIGTQGPRGPPGPAGPSGESRPGS PGPPGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCSAYGAGAPHPDQPEFTPVQDENEAMELW GSGI hide sequence

RefSeq Acc Id:	XP_013212521 ⟸ XM_013357067
- Peptide Label:	isoform X3
- UniProtKB:	I3NDZ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKIFQCKMRYWLIPAFLAIAYFCTIVQGQVAPPTRLRYNVLSQDSIQISWKAPRGKFGGYKLLV TPASGGKTNQLNLQNTATKAIIQGLMPEQNYTVQLIAYHKDKESKPAQGQFRIKDLEKRKDPTK PRAKVVDKGNGTKPTVPEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRLFLENLVTAFNVGS EKTRIGLAQYSGDPRIEWHLNAFNTKDEVIEAVRNLPYKGGNTLTGLALSYIFENSFKPEAGSR TGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADLNELQEIASEPDSTHVYNVAEF DLMHTVVESLTRTVCSRVEEQDREIKASALTTIGPPTELITSEVTARSFMVNWTHAPGKVEKYR VVYYPTRGGKPQEVVVDGSLSSTVLKNLMSLTEYQVAVFAIYAHTASEGLRGTETTLALPMASD LELYDVTENSLRVRWDAVPGATGYLILYAPLTEGLAGDEKEMKIGETHTDIELSGLVPNTEYTV TVYAMFGEEASDPATGQETTLPLSPPRNLRISNIGSNSARLSWDPTSRKISGYRILYTSADGTE INEVEVDPITTFPLKGLTPLTEYSIAIFSIYEEGQSLPLVGVFTTEEVPAQQYLEIDEVKTDGF RVTWHPLSAEEGQHKLMWIPVYGGKTEEVDLKEEQDSYVIEGLEPGTEYEVSLLAVLDDGSESE VVTAVGTTLDSFWTEPATTIVPTSPVTSAFQTGIRNLVVDDETTSSLRVTWDISDSNVEQFRVT YLTAQGDPAEEVVGTVMVPGSQNNLLLKPLLPDTEYKVTVTPIYTDGEGVSVSAPGRTLPSSGP QNLRVSEEWYNRLRITWDPPSAPVKGYRILYKPVSVPGPTLETFVGADINTILITNLLSGMDYN VKIFASQAAGHSDALTGLVKTLFLGVTNLQVSQIEMTSLCARWEVHRHATAYRIVLEPLQDTQK QESTVGGGTNRHCFYGLQPDSEYKISVYTKLQEMEGPSVSIVEKTLSLPTPPPTFPPTIPPAKE VCKSAKADLVLMVDGSWSIGDDNFNKIINFLYSTVAALDKIGADGTQVAMVQFTDDPRTEFKLN AYKTKETLLDAIKHISYKGGNTKTGKAIKYVRDTLFTVESGTRRGIPKVIVVITDGRSQDDVNK ISREMQADGYNIFAIGVADADYSELVSIGSKPSSRHVFFVDDFDAFKKIEDELITFVCETASAT CPMVHKDGVDLAGFKMMEMFGLVEKDFSSVEGVSMEPGTFNVYPCYQLHRDALVSQPTKYLHPE GLPSDYTISFLFRILPDTPEEPFALWEILNKNSDPLVGIILDNGGKTLTYFNYDQSGDFQTVTF EGPEIRKIFYGSFHKLHVVVSKTLAKVVVDCKQVGEKAINASANITSDGVEVLGRMVRSRGPSG NSAPFQLQMFDIICSTSWASRDKCCELPGLRDDESCPDLPHSCSCSETNEVALGPAGPPGGPGL RGPKGQQGEQGPKGPDGPRGETGPPGPQGPPGPQGPSGLSIQGMPGMPGDKGEKGDTGLPGPQG MPGSVGSPGRDGSPGQRGFPGKDGSTGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGLPGA KGERGERGDLQSQAMVRAVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGS PGTPGEQGPPGAPGFPGNAGVPGAPGERGLTGIKGEKGNPGIGTQGPRGPPGPAGPSGESRPGS PGPPGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCSAYGAGDLIPYNDYQH hide sequence

RefSeq Acc Id:	XP_013212529 ⟸ XM_013357075
- Peptide Label:	isoform X4
- UniProtKB:	I3NDZ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKIFQCKMRYWLIPAFLAIAYFCTIVQGQVAPPTRLRYNVLSQDSIQISWKAPRGKFGGYKLLV TPASGGKTNQLNLQNTATKAIIQGLMPEQNYTVQLIAYHKDKESKPAQGQFRIKDLEKRKDPTK PRAKVVDKGNGTKPTVPEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRLFLENLVTAFNVGS EKTRIGLAQYSGDPRIEWHLNAFNTKDEVIEAVRNLPYKGGNTLTGLALSYIFENSFKPEAGSR TGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADLNELQEIASEPDSTHVYNVAEF DLMHTVVESLTRTVCSRVEEQDREIKASALTTIGPPTELITSEVTARSFMVNWTHAPGKVEKYR VVYYPTRGGKPQEVVVDGSLSSTVLKNLMSLTEYQVAVFAIYAHTASEGLRGTETTLALPMASD LELYDVTENSLRVRWDAVPGATGYLILYAPLTEGLAGDEKEMKIGETHTDIELSGLVPNTEYTV TVYAMFGEEASDPATGQETTLPLSPPRNLRISNIGSNSARLSWDPTSRKISGYRILYTSADGTE INEVEVDPITTFPLKGLTPLTEYSIAIFSIYEEGQSLPLVGVFTTEEVPAQQYLEIDEVKTDGF RVTWHPLSAEEGQHKLMWIPVYGGKTEEVDLKEEQDSYVIEGLEPGTEYEVSLLAVLDDGSESE VVTAVGTTLDSFWTEPATTIVPTSPVTSAFQTGIRNLVVDDETTSSLRVTWDISDSNVEQFRVT YLTAQGDPAEEVVGTVMVPGSQNNLLLKPLLPDTEYKVTVTPIYTDGEGVSVSAPGRTLPSSGP QNLRVSEEWYNRLRITWDPPSAPVKGYRILYKPVSVPGPTLETFVGADINTILITNLLSGMDYN VKIFASQAAGHSDALTGLVKTLFLGVTNLQVSQIEMTSLCARWEVHRHATAYRIVLEPLQDTQK QESTVGGGTNRHCFYGLQPDSEYKISVYTKLQEMEGPSVSIVEKTLSLPTPPPTFPPTIPPAKE VCKSAKADLVLMVDGSWSIGDDNFNKIINFLYSTVAALDKIGADGTQVAMVQFTDDPRTEFKLN AYKTKETLLDAIKHISYKGGNTKTGKAIKYVRDTLFTVESGTRRGIPKVIVVITDGRSQDDVNK ISREMQADGYNIFAIGVADADYSELVSIGSKPSSRHVFFVDDFDAFKKIEDELITFVCETASAT CPMVHKDGVDLAGFKMMEMFGLVEKDFSSVEGVSMEPGTFNVYPCYQLHRDALVSQPTKYLHPE GLPSDYTISFLFRILPDTPEEPFALWEILNKNSDPLVGIILDNGGKTLTYFNYDQSGDFQTVTF EGPEIRKIFYGSFHKLHVVVSKTLAKVVVDCKQVGEKAINASANITSDGVEVLGRMVRSRGPSG NSAPFQLQMFDIICSTSWASRDKCCELPGLRDDESCPDLPHSCSCSETNEVALGPAGPPGGPGL RGPKGQQGEQGPKGPDGPRGETGPPGPQGPPGPQGPSGLSIQGMPGMPGDKGEKGDTGLPGPQG MPGSVGSPGRDGSPGQRGFPGKDGSTGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGLPGA KGERGERGDLQSQAMVRAVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGS PGTPGEQGPPGAPGFPGNAGVPGAPGERGLTGIKGEKGNPGIGTQGPRGPPGPAGPSGESRPGS PGPPGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCSAYGAGGDQG hide sequence

Ensembl Acc Id:

ENSSTOP00000022588 ⟸ ENSSTOT00000019975

RefSeq Acc Id:	XP_077872870 ⟸ XM_078016744
- Peptide Label:	isoform X6
- UniProtKB:	I3NDZ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_077872871 ⟸ XM_078016745
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_077872869 ⟸ XM_078016743
- Peptide Label:	isoform X5
- UniProtKB:	I3NDZ1 (UniProtKB/TrEMBL)

Protein Domains

Fibronectin type-III VWFA

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000025510	Ensembl, UniProtKB/TrEMBL
	ENSSTOG00015006821	ENTREZGENE
Ensembl Transcript	ENSSTOT00000019975.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.200	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	3.40.50.410	UniProtKB/TrEMBL
InterPro	Collagen	UniProtKB/TrEMBL
	ConA-like_dom_sf	UniProtKB/TrEMBL
	ECM_Assembly_Org	UniProtKB/TrEMBL
	FN3_dom	UniProtKB/TrEMBL
	FN3_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	TSPN-like_N	UniProtKB/TrEMBL
	VWF_A	UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/TrEMBL
KEGG Report	iti:101968375	UniProtKB/TrEMBL
NCBI Gene	Col14a1	ENTREZGENE
PANTHER	COLLAGEN ALPHA	UniProtKB/TrEMBL
	COLLAGEN ALPHA-1(XIV) CHAIN	UniProtKB/TrEMBL
Pfam	Collagen	UniProtKB/TrEMBL
	fn3	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
PRINTS	VWFADOMAIN	UniProtKB/TrEMBL
PROSITE	FN3	UniProtKB/TrEMBL
	VWFA	UniProtKB/TrEMBL
SMART	FN3	UniProtKB/TrEMBL
	TSPN	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49265	UniProtKB/TrEMBL
	SSF49899	UniProtKB/TrEMBL
	SSF53300	UniProtKB/TrEMBL
UniProt	I3NDZ1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)