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Gene: Cryzl1 (crystallin zeta like 1) Ictidomys tridecemlineatus

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Symbol:

Cryzl1

Name:

crystallin zeta like 1

RGD ID:

12446929

Description:

ENCODES a protein that exhibits identical protein binding (inferred); oxidoreductase activity (inferred); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); FOUND IN early endosome (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

crystallin zeta like 1, transcript variant X1; crystallin zeta like 1, transcript variant X2; crystallin zeta like 1, transcript variant X3; crystallin zeta like 1, transcript variant X4; crystallin zeta like 1, transcript variant X5; quinone oxidoreductase-like protein 1

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CRYZL1 (crystallin zeta like 1)	NCBI	Ortholog
Mus musculus (house mouse):	Cryzl1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cryzl1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cryzl1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CRYZL1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CRYZL1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CRYZL1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CRYZL1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cryzl1 (crystallin zeta like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,744 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	8,678,850 - 8,711,645 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	8,678,212 - 8,711,687 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amyotrophic lateral sclerosis type 1 (ISO)

autosomal dominant intellectual developmental disorder 7 (ISO)

Familial Platelet Disorder with Associated Myeloid Malignancy (ISO)

immunodeficiency 28 (ISO)

Parkinson's disease 20 (ISO)

ZTTK syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

early endosome (IEA)

Molecular Function

identical protein binding (IEA)

oxidoreductase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Cryzl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,744 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	8,678,850 - 8,711,645 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	8,678,212 - 8,711,687 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CRYZL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	33,589,341 - 33,641,741 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	33,589,341 - 33,643,926 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	34,961,647 - 35,014,047 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	33,883,517 - 33,936,030 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	33,883,519 - 33,935,936	NCBI
Celera	21	20,161,267 - 20,213,781 (-)	NCBI		Celera
Cytogenetic Map	21	q22.11	NCBI
HuRef	21	20,440,040 - 20,492,485 (-)	NCBI		HuRef
CHM1_1	21	34,524,284 - 34,576,624 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	21	31,971,130 - 32,023,555 (-)	NCBI		T2T-CHM13v2.0

Cryzl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	91,486,210 - 91,525,690 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	91,486,210 - 91,525,863 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	91,689,300 - 91,729,206 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	91,689,322 - 91,728,975 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	91,689,702 - 91,728,844 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	91,578,316 - 91,617,458 (-)	NCBI		MGSCv36	mm8
Celera	16	92,768,051 - 92,807,237 (-)	NCBI		Celera
Cytogenetic Map	16	C4	NCBI
cM Map	16	53.26	NCBI

Cryzl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	44,419,099 - 44,464,366 (-)	NCBI		GRCr8
mRatBN7.2	11	30,933,140 - 30,977,936 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	30,933,144 - 30,977,867 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	39,627,065 - 39,671,779 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	32,298,498 - 32,343,209 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	31,463,616 - 31,505,449 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	31,847,741 - 31,893,042 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	31,847,745 - 31,892,531 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	35,456,474 - 35,498,147 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	31,662,123 - 31,720,570 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	31,701,183 - 31,759,442 (-)	NCBI
Celera	11	30,600,542 - 30,637,860 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

Cryzl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	33,015,545 - 33,055,495 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	33,016,289 - 33,055,495 (-)	NCBI	ChiLan1.0	ChiLan1.0

CRYZL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	29,706,766 - 29,759,214 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	24,565,034 - 24,617,403 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	19,956,289 - 20,008,741 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	33,328,674 - 33,381,033 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	33,328,674 - 33,381,033 (-)	Ensembl	panpan1.1		panPan2

CRYZL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	29,109,017 - 29,144,432 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	28,207,857 - 28,243,329 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	28,415,176 - 28,450,718 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	28,415,202 - 28,450,285 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	28,281,951 - 28,317,514 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	28,295,903 - 28,331,424 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	28,795,660 - 28,831,155 (-)	NCBI		UU_Cfam_GSD_1.0

CRYZL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	197,203,842 - 197,248,421 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	197,204,473 - 197,248,848 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	207,015,352 - 207,077,229 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CRYZL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	58,543,603 - 58,598,133 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	58,543,882 - 58,598,754 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666071	1,048,140 - 1,099,754 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cryzl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	21,808,688 - 21,846,880 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	21,807,703 - 21,847,012 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005323516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013357787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021725324	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021725325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005734567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000008747 ⟹ ENSSTOP00000007841

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936500	8,685,765 - 8,711,192 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000037656 ⟹ ENSSTOP00000032355

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936500	8,685,765 - 8,707,156 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000041725 ⟹ ENSSTOP00000030792

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936500	8,678,850 - 8,711,645 (+)	Ensembl

RefSeq Acc Id:

XM_005323516 ⟹ XP_005323573

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,724 (-)	NCBI
SpeTri2.0	NW_004936500	8,678,213 - 8,711,687 (+)	NCBI

Sequence:

show sequence

ACCGGAGGATGCTAGGAGAGAGAGCTGAGGAAAAATGGAGGAGTACAGAATGACACACAGATAA
GCCAATCAACAGGCTCGGAGAGAAAACCTCTTCCTCCTCCCACAAAGGCGGAACCAAAGGTTTC
GGGTCTAGGATTTATGGAGAGTTTCTTCCACCATTTGGTGCATCTGCTCGCTGCCGTGAGAAAC
AATAGCTACGATGCATTCAACTAAATTACGTAAGGTTTGACCAGAGAGTATGTAGTGGAGAAGA
AAAGGGAGTCAGGGTACAGCCCGAGGAGGGTGCAGTAGGGGGGCTCAGTTGGAATGAGGAAGGG
TGTGGCTTTAACTTAGATTTGCATAAAACGGAACCCATCCGGGCGATTTCAACTTCGCCCCTTT
ATTGGTAGCCCTTGGGGCGGTACCTCGCGTCGCCCCTTTTGGAGCATGCTGGGAGTTGTAGTTC
CGAGTTTGGTTGCTATGGCGTTCTCTACAGCCTCCTGGAGCCCGGCCCCGCCCTGCAGGAGTGA
CGAACTGTCGGACCAATGGGAGTACCATCTGATTTCGAGGGGGCGGGTTCCCTGCAGAAAGACT
GGAAGGTGGCGGTGGCGAAGGCGCTGGCAGTTGGGCTGCTTGGAGGCAGGTGACTATGAAAGGC
TTATATTTTCAACAGAGTTCCACAAATGGAGAAATAACATTTGTATTTCAAGAAAAGGAAAATC
TTCCTATTACAGAGGATAACTTTGTGAAACTCCAAGTTAAAGCTTGTGCTTTGAGCCAAATAAA
TACAAAGCTTCTGGCGGAAATGAAGATGGAAAAGGATTTCTTTCCTGTTGGAAGAGAAGTTGCT
GGAATTGTTTTGGATGTTGGAACCAAGGTATCATTCTTGCAACCAGATGATGAAGTAGTTGGAA
TTTTGCCCCTGGATTCTGAAGACCCTGGACTTTGTGAAGTGATTAGAGTACATGAACATTACTT
GGTTCATAAACCAGAAAAGGTTACGTGGACAGAAGCTGCTGGAGCTATTCGGGATGGAGTGCGA
GCTTATACAGCCCTGCATTATCTTTCTCATCTCTCTCCTGGAAAATCCGTGCTGATAATGGATG
GAGCAAGTGCATTTGGCACAATAGCCATTCAGTTAGCACACCACAGAGGAGCCAAAGTGATTTC
AACAGCATACAGCTTAGAAGACAAGCAGTGCCTTGAAAGACTTAGGTCTTCTATAGCCCGAGTG
ATTGATGTATCGAATGGGAAGGTTGATGTTGCTGAAAGCTGTTTGGAAGAAACAGGAGGCCTGG
GAGTAGATATTGTTCTAGATGCTGGAGTGAGATTATATAGTAAAGATGATGAACCAGCTGTAAA
ATTACAACTACTACCGCATAAACATGATATCATCACGCTTCTTGGTGTTGGAGGCCATTGGATA
ACAACAGAAGAAAGCCTTCAGTTGGATCCTCCAGATAGCCATTGCCTTTTCCTCAAGGGAGCAA
CGGTGGCTTTCCTTAATGATGAAATTTGGAATTTGTCAAATGTACAACAGGGAAAATATCTTTG
CATTTTAAAAGATGTGATGGAGAAGTTATCAGCTGGTATTTTTAGACCTCAGTTGGATGAACCT
ATTCCACTGTATGAGGCAAAAGTTTCCATGGAAGTTGTTCAGAAAAATCAAGGAAGAAAAAAGC
AAGTTGTTCAATTTTAATCTTCTTTCTCAGACCTCAGCTGGATGAACCATCCATCACAGTATTT
GAAGCCAGAGTTTTCCTTGGAAATTGGGAAAAATCAAGGAAGATAAAAGCAAGTTGTTCAGTGT
TTAAGCATGTTTTCTGGCTCACAAGATGTTTGGTTATTTGACATATTTGAAAAATATTTTCCAA
TTTATTGTGCAGATGATCCAAGATAATTCTATAACATTTGAAGGGGGTACTCTGAAAGCCATTT
TTAGGTGTTTTTTTTTTTTCCCCCACACATTTTCCTCTCCTATAAAATTCTTCTAATGGGAAAA
ACTTCTGCTTTCAGCAAAATCCACACCATTCTTCTGAGTCTGTTACAGGCCTTGTTATACTGTG
AAAGTAATGCTATTAATTATGTATTAATTCCATTTTAAACAACCTAACAAGCCTTTCTGTGCTG
TCAAAATTCAAGTTTTTGAATATATTTTCAGGTCTCAAAAGTATCTAACTCATATACACTTAAA

hide sequence

RefSeq Acc Id:

XM_013357787 ⟹ XP_013213241

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,733 (-)	NCBI
SpeTri2.0	NW_004936500	8,678,212 - 8,711,687 (+)	NCBI

Sequence:

show sequence

CACCGGAGGATGCTAGGAGAGAGAGCTGAGGAAAAATGGAGGAGTACAGAATGACACACAGATA
AGCCAATCAACAGGCTCGGAGAGAAAACCTCTTCCTCCTCCCACAAAGGCGGAACCAAAGGTTT
CGGGTCTAGGATTTATGGAGAGTTTCTTCCACCATTTGGTGCATCTGCTCGCTGCCGTGAGAAA
CAATAGCTACGATGCATTCAACTAAATTACGTAAGGTTTGACCAGAGAGTATGTAGTGGAGAAG
AAAAGGGAGTCAGGGTACAGCCCGAGGAGGGTGCAGTAGGGGGGCTCAGTTGGAATGAGGAAGG
GTGTGGCTTTAACTTAGATTTGCATAAAACGGAACCCATCCGGGCGATTTCAACTTCGCCCCTT
TATTGGTAGCCCTTGGGGCGGTACCTCGCGTCGCCCCTTTTGGAGCATGCTGGGAGTTGTAGTT
CCGAGTTTGGTTGCTATGGCGTTCTCTACAGCCTCCTGGAGCCCGGCCCCGCCCTGCAGGAGTG
ACGAACTGTCGGACCAATGGGAGTACCATCTGATTTCGAGGGGGCGGGTTCCCTGCAGAAAGAC
TGGAAGGTGGCGGTGGCGAAGGCGCTGGCAGTTGGGCTGCTTGGAGGCAGGTGACTATGAAAGG
CTTATATTTTCAACAGAGTTCCACAAATGGAGAAATAACATTTGTATTTCAAGAAAAGGAAAAT
CTTCCTATTACAGAGGATAACTTTGTGAAACTCCAAGTTAAAGCTTGTGCTTTGAGCCAAATAA
ATACAAAGCTTCTGGCGGAAATGAAGATGGAAAAGGATTTCTTTCCTGTTGGAAGAGAAGTTGC
TGGAATTGTTTTGGATGTTGGAACCAAGGTATCATTCTTGCAACCAGATGATGAAGTAGTTGGA
ATTTTGCCCCTGGATTCTGAAGACCCTGGACTTTGTGAAGTGATTAGAGTACATGAACATTACT
TGGTTCATAAACCAGAAAAGGTTACGTGGACAGAAGCTGCTGGAGCTATTCGGGATGGAGTGCG
AGCTTATACAGCCCTGCATTATCTTTCTCATCTCTCTCCTGGAAAATCCGTGCTGATAATGGAT
GGAGCAAGTGCATTTGGCACAATAGCCATTCAGTTAGCACACCACAGAGGAGCCAAAGTGATTT
CAACAGCATACAGCTTAGAAGACAAGCAGTGCCTTGAAAGACTTAGGTCTTCTATAGCCCGAGT
GATTGATGTATCGAATGGGAAGGTTGATGTTGCTGAAAGCTGTTTGGAAGAAACAGGAGGCCTG
GGAGTAGATATTGTTCTAGATGCTGGAGTGAGATTATATAGTAAAGATGATGAACCAGCTGTAA
AATTACAACTACTACCGCATAAACATGATATCATCACGCTTCTTGGTGTTGGAGGCCATTGGAT
AACAACAGAAGAAAGCCTTCAGCTACGCATTTTAAAAGATGTGATGGAGAAGTTATCAGCTGGT
ATTTTTAGACCTCAGTTGGATGAACCTATTCCACTGTATGAGGCAAAAGTTTCCATGGAAGTTG
TTCAGAAAAATCAAGGAAGAAAAAAGCAAGTTGTTCAATTTTAATCTTCTTTCTCAGACCTCAG
CTGGATGAACCATCCATCACAGTATTTGAAGCCAGAGTTTTCCTTGGAAATTGGGAAAAATCAA
GGAAGATAAAAGCAAGTTGTTCAGTGTTTAAGCATGTTTTCTGGCTCACAAGATGTTTGGTTAT
TTGACATATTTGAAAAATATTTTCCAATTTATTGTGCAGATGATCCAAGATAATTCTATAACAT
TTGAAGGGGGTACTCTGAAAGCCATTTTTAGGTGTTTTTTTTTTTTCCCCCACACATTTTCCTC
TCCTATAAAATTCTTCTAATGGGAAAAACTTCTGCTTTCAGCAAAATCCACACCATTCTTCTGA
GTCTGTTACAGGCCTTGTTATACTGTGAAAGTAATGCTATTAATTATGTATTAATTCCATTTTA
AACAACCTAACAAGCCTTTCTGTGCTGTCAAAATTCAAGTTTTTGAATATATTTTCAGGTCTCA
AAAGTATCTAACTCATATACACTTAAA

hide sequence

RefSeq Acc Id:

XM_040287007 ⟹ XP_040142941

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,737 (-)	NCBI

RefSeq Acc Id:

XM_040287008 ⟹ XP_040142942

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,737 (-)	NCBI

RefSeq Acc Id:

XM_040287009 ⟹ XP_040142943

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,788,979 (-)	NCBI

RefSeq Acc Id:

XM_040287010 ⟹ XP_040142944

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,740 (-)	NCBI

RefSeq Acc Id:

XM_040287011 ⟹ XP_040142945

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,136 - 28,789,744 (-)	NCBI

RefSeq Acc Id:

XM_040287012 ⟹ XP_040142946

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,761,012 - 28,789,744 (-)	NCBI

RefSeq Acc Id:

XR_005734567

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404971	28,756,632 - 28,789,742 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005323573	(Get FASTA)	NCBI Sequence Viewer
	XP_013213241	(Get FASTA)	NCBI Sequence Viewer
	XP_040142941	(Get FASTA)	NCBI Sequence Viewer
	XP_040142942	(Get FASTA)	NCBI Sequence Viewer
	XP_040142943	(Get FASTA)	NCBI Sequence Viewer
	XP_040142944	(Get FASTA)	NCBI Sequence Viewer
	XP_040142945	(Get FASTA)	NCBI Sequence Viewer
	XP_040142946	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000007841.3
	ENSSTOP00000030792.1
	ENSSTOP00000032355.1
GenBank Protein	KAG3283916	(Get FASTA)	NCBI Sequence Viewer
	KAG3283917	(Get FASTA)	NCBI Sequence Viewer
	KAG3283918	(Get FASTA)	NCBI Sequence Viewer
	KAG3283919	(Get FASTA)	NCBI Sequence Viewer
	KAG3283920	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005323573 ⟸ XM_005323516
- Peptide Label:	isoform X2
- UniProtKB:	A0A287DB40 (UniProtKB/TrEMBL), I3MC80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGLYFQQSSTNGEITFVFQEKENLPITEDNFVKLQVKACALSQINTKLLAEMKMEKDFFPVGR EVAGIVLDVGTKVSFLQPDDEVVGILPLDSEDPGLCEVIRVHEHYLVHKPEKVTWTEAAGAIRD GVRAYTALHYLSHLSPGKSVLIMDGASAFGTIAIQLAHHRGAKVISTAYSLEDKQCLERLRSSI ARVIDVSNGKVDVAESCLEETGGLGVDIVLDAGVRLYSKDDEPAVKLQLLPHKHDIITLLGVGG HWITTEESLQLDPPDSHCLFLKGATVAFLNDEIWNLSNVQQGKYLCILKDVMEKLSAGIFRPQL DEPIPLYEAKVSMEVVQKNQGRKKQVVQF hide sequence

RefSeq Acc Id:	XP_013213241 ⟸ XM_013357787
- Peptide Label:	isoform X5
- UniProtKB:	I3MC80 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKGLYFQQSSTNGEITFVFQEKENLPITEDNFVKLQVKACALSQINTKLLAEMKMEKDFFPVGR EVAGIVLDVGTKVSFLQPDDEVVGILPLDSEDPGLCEVIRVHEHYLVHKPEKVTWTEAAGAIRD GVRAYTALHYLSHLSPGKSVLIMDGASAFGTIAIQLAHHRGAKVISTAYSLEDKQCLERLRSSI ARVIDVSNGKVDVAESCLEETGGLGVDIVLDAGVRLYSKDDEPAVKLQLLPHKHDIITLLGVGG HWITTEESLQLRILKDVMEKLSAGIFRPQLDEPIPLYEAKVSMEVVQKNQGRKKQVVQF hide sequence

RefSeq Acc Id:	XP_040142945 ⟸ XM_040287011
- Peptide Label:	isoform X4
- UniProtKB:	I3MC80 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142944 ⟸ XM_040287010
- Peptide Label:	isoform X3
- UniProtKB:	A0A287DFP6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142942 ⟸ XM_040287008
- Peptide Label:	isoform X1
- UniProtKB:	I3MC80 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142941 ⟸ XM_040287007
- Peptide Label:	isoform X1
- UniProtKB:	I3MC80 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142943 ⟸ XM_040287009
- Peptide Label:	isoform X1
- UniProtKB:	I3MC80 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040142946 ⟸ XM_040287012
- Peptide Label:	isoform X6
- UniProtKB:	A0A287DFP6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000007841 ⟸ ENSSTOT00000008747

Ensembl Acc Id:

ENSSTOP00000030792 ⟸ ENSSTOT00000041725

Ensembl Acc Id:

ENSSTOP00000032355 ⟸ ENSSTOT00000037656

Protein Domains

Enoyl reductase (ER)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000008756	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000008747.3	UniProtKB/TrEMBL
	ENSSTOT00000037656.1	UniProtKB/TrEMBL
	ENSSTOT00000041725.1	UniProtKB/TrEMBL
Gene3D-CATH	Medium-chain alcohol dehydrogenases, catalytic domain	UniProtKB/TrEMBL
InterPro	CRYZL1	UniProtKB/TrEMBL
	GroES-like_sf	UniProtKB/TrEMBL
	NAD(P)-bd_dom_sf	UniProtKB/TrEMBL
	PKS_ER	UniProtKB/TrEMBL
NCBI Gene	Cryzl1	ENTREZGENE
PANTHER	PTHR44461	UniProtKB/TrEMBL
	QUINONE OXIDOREDUCTASE-LIKE PROTEIN 1	UniProtKB/TrEMBL
SMART	PKS_ER	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50129	UniProtKB/TrEMBL
	SSF51735	UniProtKB/TrEMBL
UniProt	A0A287DB40	ENTREZGENE, UniProtKB/TrEMBL
	A0A287DFP6	ENTREZGENE, UniProtKB/TrEMBL
	I3MC80	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar