Symbol:
Aga
Name:
aspartylglucosaminidase
RGD ID:
12446338
Description:
ENCODES a protein that exhibits identical protein binding (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog); ASSOCIATED WITH aspartylglucosaminuria (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (inferred); endoplasmic reticulum (inferred); extracellular space (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404943 27,436,705 - 27,447,598 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936516 7,847,356 - 7,861,966 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936516 7,850,995 - 7,861,883 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Aga Squirrel aspartylglucosaminuria ISO RGD:1320096 8554872 ClinVar Annotator: match by term: Aspartylglucosaminuria | ClinVar Annotator: match by term: Aspartylglucosaminuria, finnish type ClinVar PMID:10399108|PMID:10571008|PMID:11309371|PMID:11754099|PMID:1427775|PMID:15365992|PMID:1559710|PMID:16199547|PMID:1703489|PMID:1722323|PMID:1756604|PMID:17576681|PMID:1765378|PMID:1879549|PMID:18992224|PMID:1904874|PMID:2011603|PMID:21228398|PMID:23271757|PMID:24033266|PMID:25456816|PMID:25525159|PMID:25741868|PMID:27876883|PMID:2811876|PMID:28492532|PMID:29247835|PMID:29930972|PMID:29993127|PMID:30564628|PMID:33439067|PMID:6883788|PMID:7627186|PMID:7881426|PMID:8064811|PMID:8172656|PMID:8457202|PMID:8702913|PMID:8776587|PMID:8830180|PMID:9137882|PMID:9536098|PMID:9737998|PMID:9742145 Aga Squirrel autistic disorder ISO RGD:1320096 8554872 ClinVar Annotator: match by term: Autism ClinVar PMID:10571008|PMID:11309371|PMID:1722323|PMID:18992224|PMID:25741868|PMID:28492532|PMID:8457202 Aga Squirrel genetic disease ISO RGD:1320096 8554872 ClinVar Annotator: match by term: Inborn genetic diseases ClinVar PMID:11309371|PMID:1722323|PMID:25741868|PMID:28492532|PMID:29247835|PMID:7627186 Aga Squirrel intellectual disability ISO RGD:1320096 8554872 ClinVar Annotator: match by term: Intellectual disability ClinVar PMID:11309371|PMID:1722323|PMID:18992224|PMID:25456816|PMID:25741868|PMID:28492532|PMID:9737998 Aga Squirrel Neurodevelopmental Disorders ISO RGD:1320096 8554872 ClinVar Annotator: match by term: Neurodevelopmental abnormality | ClinVar Annotator: match by term: Neurodevelopmental disorder ClinVar PMID:11309371|PMID:1722323|PMID:18992224|PMID:25456816|PMID:25741868|PMID:28492532|PMID:9737998
Aga (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404943 27,436,705 - 27,447,598 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936516 7,847,356 - 7,861,966 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936516 7,850,995 - 7,861,883 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
AGA (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 4 177,430,774 - 177,442,437 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 4 177,430,774 - 177,442,437 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 4 178,351,928 - 178,363,591 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 4 178,588,918 - 178,600,585 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 4 178,727,072 - 178,738,740 NCBI Celera 4 175,679,083 - 175,690,820 (-) NCBI Celera Cytogenetic Map 4 q34.3 NCBI HuRef 4 174,102,201 - 174,113,937 (-) NCBI HuRef CHM1_1 4 178,328,375 - 178,340,109 (-) NCBI CHM1_1 T2T-CHM13v2.0 4 180,769,443 - 180,781,108 (-) NCBI T2T-CHM13v2.0
Aga (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 53,964,718 - 53,976,457 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 53,964,762 - 53,976,456 (+) Ensembl GRCm39 Ensembl GRCm38 8 53,511,683 - 53,523,422 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 53,511,727 - 53,523,421 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 8 54,597,080 - 54,608,776 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 8 55,010,424 - 55,022,120 (+) NCBI MGSCv36 mm8 Celera 8 56,224,973 - 56,236,712 (+) NCBI Celera Cytogenetic Map 8 B1.3 NCBI cM Map 8 29.13 NCBI
Aga (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 45,191,215 - 45,249,537 (-) NCBI GRCr8 mRatBN7.2 16 38,504,661 - 38,516,607 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 38,504,663 - 38,516,606 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 16 43,852,185 - 43,864,091 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 16 47,212,763 - 47,224,669 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 16 42,568,414 - 42,580,309 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 16 41,222,225 - 41,234,169 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 16 41,222,238 - 41,234,095 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 16 40,992,072 - 41,004,008 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 16 41,383,536 - 41,395,394 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 16 41,383,601 - 41,395,548 (-) NCBI Celera 16 36,605,222 - 36,617,080 (-) NCBI Celera Cytogenetic Map 16 p11 NCBI
Aga (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955403 30,471,809 - 30,482,653 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955403 30,471,809 - 30,482,653 (+) NCBI ChiLan1.0 ChiLan1.0
AGA (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 3 175,176,804 - 175,188,178 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 4 175,540,655 - 175,551,997 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 4 169,624,480 - 169,635,810 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 4 181,859,116 - 181,870,473 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 4 181,855,136 - 181,870,473 (-) Ensembl panpan1.1 panPan2
AGA (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 16 52,314,860 - 52,324,879 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 16 52,314,535 - 52,324,894 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 16 47,809,385 - 47,818,758 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 16 54,618,058 - 54,629,014 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 16 54,618,088 - 54,629,029 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 16 52,515,396 - 52,524,764 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 16 53,109,738 - 53,120,301 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 16 53,347,863 - 53,357,457 (+) NCBI UU_Cfam_GSD_1.0
AGA (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 15 39,701,310 - 39,713,496 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 15 39,702,900 - 39,714,566 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 15 45,613,331 - 45,623,930 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
AGA (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 7 123,532,215 - 123,544,658 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 7 123,528,800 - 123,544,623 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666037 103,649,972 - 103,662,332 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Aga (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000011870 ⟹ ENSSTOP00000010647
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936516 7,847,356 - 7,861,966 (-) Ensembl
RefSeq Acc Id:
XM_005325537 ⟹ XP_005325594
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024404943 27,436,809 - 27,447,552 (-) NCBI SpeTri2.0 NW_004936516 7,850,995 - 7,861,883 (-) NCBI
Sequence:
GGTCCTGGAGATCACGAGTGCTGGAGCTCCGGACGGGTCTGCGCCGGTCGCTTGACCTGGGACTTATTTCGCGCTTGTCTGCTTAGCGCGCAACTATGGCGCGGAAGTCGAATTTGTTTGTGTTTCTC GTGCCGCTCCTGCTCGGCCCGACCCTAGTGCGCGGCTTCAACACTCTGCCCCTGGTCCTCAACACTTGGCCTTTTAAGAGTGCAACCGAAGCAGCATGGCGGGTGTTAGAATCTGGTGGTTCTGCCCT CGATGCCATTGAGAATGGCTGTGCTACGTGTGAGAAAGAGCAGTGTGATGGCTCTGTAGGCTTTGGAGGAAGTCCTGATGAACTTGGGGAAACCACGCTGGATGCCATGATCATGGATGGCACTACCA TGGATATAGGAGCAGTAGGAGATCTTAGACGAATTAAAAATGCTATTGGTGTGGCACGGAAAGTACTAGAACATACAACACACACACTTTTGGCAGGAGAGTCAGCCACCAAGTTTGCTGAAAGTATG GGGTTTACCAATGAGGATTTATCTACCAATGCTTCTCAAGCTCTTCATTCGGATTGGCTTGCTCACAATTGCCAGCCAAATCATTGGAGAAATGTAATACCAGATGCTTCAAAATACTGTGGACCCTA CAAACCACCTGGTATCTTAAATAAGGATCATCCTACCTATAAAAAAGCAGAAGATGATTATGGTCATGATACTATTGGTATGGTTGTAATCCATAAGACTGGACGTACTGCTGCTGGTACATCTACAA ATGGTATAAAATTCAAAATACCTGGTCGCATAGGAGACTCACCAATACCTGGAGCTGGGGCATATGCTGATGATACTGCAGGGGCAGCTGCAGCCACTGGGAATGGTGATATATTGATGCGTTTTCTG CCAAGCTACCAAGCTGTAGAATATATGAGTAGAGGAGAAGATCCAACCATAGCTTGCCAAAAAGTGATTTCAAGAATTCAGAAGTATTTTCCAAAATTTTTTGGGGCTGTTATATGTGCCAATGTAAC TGGAAGTTATGGTGCTGCTTGCAATAAACTTCCAACATTTACTCAGTTTAGTTTCATGGTTTATAATTCTCTAAAAAATGAACCAACTGAGGAAAAAGTTGACTGCATCTAATCCATCTTCTCTGTCA CTATCTGTATTTAAAGAAGAAAAAAACAAAAGCAAAAGGTTATAATCATCATGTAGTGGTTGTCTGCATTGTAAGGTTTTTGTATAAAGTAAACACAAAAATAAATTTATGCTGAAATGACA
hide sequence
RefSeq Acc Id:
XM_040294058 ⟹ XP_040149992
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024404943 27,436,705 - 27,447,598 (-) NCBI
RefSeq Acc Id:
XP_005325594 ⟸ XM_005325537
- Peptide Label:
isoform X2
- UniProtKB:
I3MI50 (UniProtKB/TrEMBL)
- Sequence:
MARKSNLFVFLVPLLLGPTLVRGFNTLPLVLNTWPFKSATEAAWRVLESGGSALDAIENGCATCEKEQCDGSVGFGGSPDELGETTLDAMIMDGTTMDIGAVGDLRRIKNAIGVARKVLEHTTHTLLA GESATKFAESMGFTNEDLSTNASQALHSDWLAHNCQPNHWRNVIPDASKYCGPYKPPGILNKDHPTYKKAEDDYGHDTIGMVVIHKTGRTAAGTSTNGIKFKIPGRIGDSPIPGAGAYADDTAGAAAA TGNGDILMRFLPSYQAVEYMSRGEDPTIACQKVISRIQKYFPKFFGAVICANVTGSYGAACNKLPTFTQFSFMVYNSLKNEPTEEKVDCI
hide sequence
RefSeq Acc Id:
XP_040149992 ⟸ XM_040294058
- Peptide Label:
isoform X1
Ensembl Acc Id:
ENSSTOP00000010647 ⟸ ENSSTOT00000011870