S100A16 (S100 calcium binding protein A16) - Rat Genome Database

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Gene: S100A16 (S100 calcium binding protein A16) Canis lupus familiaris
Analyze
Symbol: S100A16
Name: S100 calcium binding protein A16
RGD ID: 12428622
Description: ENCODES a protein that exhibits calcium ion binding (inferred); identical protein binding (inferred); metal ion binding (inferred); INVOLVED IN response to calcium ion (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); immunodeficiency 42 (ortholog); MHC class II deficiency (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein S100-A16
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1743,447,422 - 43,452,625 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl743,447,494 - 43,452,130 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha742,940,396 - 42,945,609 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0743,397,110 - 43,402,323 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl743,397,192 - 43,401,828 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1743,099,412 - 43,104,625 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0743,153,079 - 43,158,311 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0743,436,925 - 43,442,138 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
S100A16
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1743,447,422 - 43,452,625 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl743,447,494 - 43,452,130 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha742,940,396 - 42,945,609 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0743,397,110 - 43,402,323 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl743,397,192 - 43,401,828 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1743,099,412 - 43,104,625 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0743,153,079 - 43,158,311 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0743,436,925 - 43,442,138 (+)NCBIUU_Cfam_GSD_1.0
S100A16
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381153,606,883 - 153,613,137 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1153,606,886 - 153,613,145 (-)EnsemblGRCh38hg38GRCh38
GRCh371153,579,359 - 153,585,613 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361151,845,991 - 151,852,138 (-)NCBINCBI36Build 36hg18NCBI36
Build 341150,392,439 - 150,398,587NCBI
Celera1126,650,891 - 126,657,038 (-)NCBICelera
Cytogenetic Map1q21.3NCBI
HuRef1124,942,655 - 124,948,802 (-)NCBIHuRef
CHM1_11154,975,340 - 154,981,487 (-)NCBICHM1_1
T2T-CHM13v2.01152,744,143 - 152,750,397 (-)NCBIT2T-CHM13v2.0
S100a16
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39390,444,561 - 90,450,458 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl390,444,561 - 90,450,458 (+)EnsemblGRCm39 Ensembl
GRCm38390,537,254 - 90,543,151 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl390,537,254 - 90,543,151 (+)EnsemblGRCm38mm10GRCm38
MGSCv37390,345,145 - 90,347,073 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36390,627,150 - 90,629,078 (+)NCBIMGSCv36mm8
Celera390,579,766 - 90,581,694 (+)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.25NCBI
S100a16
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82178,313,986 - 178,319,696 (+)NCBIGRCr8
mRatBN7.22176,016,405 - 176,022,117 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2176,016,268 - 176,022,117 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2183,156,468 - 183,162,244 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02181,178,731 - 181,184,511 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02175,778,980 - 175,784,750 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02189,923,140 - 189,928,850 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2189,922,996 - 189,928,848 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02209,356,226 - 209,361,935 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42182,807,564 - 182,813,276 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12182,759,870 - 182,763,374 (+)NCBI
Celera2169,951,445 - 169,957,171 (+)NCBICelera
Cytogenetic Map2q34NCBI
S100a16
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955545254,370 - 260,471 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955545254,370 - 260,471 (-)NCBIChiLan1.0ChiLan1.0
S100A16
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2196,221,000 - 96,227,120 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1195,959,841 - 95,962,311 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01128,961,978 - 128,968,230 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11132,590,360 - 132,596,532 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1132,590,360 - 132,592,827 (-)Ensemblpanpan1.1panPan2
S100a16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505824,376,662 - 24,382,902 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365803,406,962 - 3,409,717 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365803,407,044 - 3,413,277 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
S100A16
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1496,030,930 - 96,038,602 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24104,960,698 - 104,968,318 (-)NCBISscrofa10.2Sscrofa10.2susScr3
S100A16
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12010,192,117 - 10,198,257 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660389,569,260 - 9,575,464 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
S100a16
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248853,532,292 - 3,538,640 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248853,532,876 - 3,538,530 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in S100A16
68 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005622819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022421400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022421401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038481927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038481928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038481929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038481931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038481932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038481933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038607423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038607424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038607425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038607426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038607427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038607428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_547580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_861080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000027800   ⟹   ENSCAFP00000025850
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl743,447,494 - 43,452,130 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845003503   ⟹   ENSCAFP00845002778
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl743,397,192 - 43,401,828 (+)Ensembl
RefSeq Acc Id: XM_005622819   ⟹   XP_005622876
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1743,450,814 - 43,452,625 (+)NCBI
Dog10K_Boxer_Tasha742,943,787 - 42,945,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022421400   ⟹   XP_022277108
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1743,451,019 - 43,452,625 (+)NCBI
Dog10K_Boxer_Tasha742,944,009 - 42,945,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022421401   ⟹   XP_022277109
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1743,451,006 - 43,452,625 (+)NCBI
Dog10K_Boxer_Tasha742,943,997 - 42,945,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038481927   ⟹   XP_038337855
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1743,099,415 - 43,104,625 (+)NCBI
RefSeq Acc Id: XM_038481928   ⟹   XP_038337856
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1743,099,412 - 43,104,625 (+)NCBI
RefSeq Acc Id: XM_038481929   ⟹   XP_038337857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1743,099,412 - 43,104,625 (+)NCBI
RefSeq Acc Id: XM_038481931   ⟹   XP_038337859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1743,102,803 - 43,104,625 (+)NCBI
RefSeq Acc Id: XM_038481932   ⟹   XP_038337860
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1743,103,013 - 43,104,625 (+)NCBI
RefSeq Acc Id: XM_038481933   ⟹   XP_038337861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1743,103,025 - 43,104,625 (+)NCBI
RefSeq Acc Id: XM_038543312   ⟹   XP_038399240
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0743,436,928 - 43,442,138 (+)NCBI
RefSeq Acc Id: XM_038543313   ⟹   XP_038399241
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0743,436,925 - 43,442,138 (+)NCBI
RefSeq Acc Id: XM_038543314   ⟹   XP_038399242
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0743,436,925 - 43,442,138 (+)NCBI
RefSeq Acc Id: XM_038543315   ⟹   XP_038399243
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0743,440,316 - 43,442,138 (+)NCBI
RefSeq Acc Id: XM_038543316   ⟹   XP_038399244
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0743,440,526 - 43,442,138 (+)NCBI
RefSeq Acc Id: XM_038543317   ⟹   XP_038399245
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0743,440,538 - 43,442,138 (+)NCBI
RefSeq Acc Id: XM_038572815   ⟹   XP_038428743
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha742,940,396 - 42,945,609 (+)NCBI
RefSeq Acc Id: XM_038607423   ⟹   XP_038463351
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0743,153,082 - 43,158,311 (+)NCBI
RefSeq Acc Id: XM_038607424   ⟹   XP_038463352
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0743,153,079 - 43,158,311 (+)NCBI
RefSeq Acc Id: XM_038607425   ⟹   XP_038463353
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0743,153,079 - 43,158,311 (+)NCBI
RefSeq Acc Id: XM_038607426   ⟹   XP_038463354
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0743,156,489 - 43,158,311 (+)NCBI
RefSeq Acc Id: XM_038607427   ⟹   XP_038463355
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0743,156,699 - 43,158,311 (+)NCBI
RefSeq Acc Id: XM_038607428   ⟹   XP_038463356
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0743,156,711 - 43,158,311 (+)NCBI
RefSeq Acc Id: XM_038672118   ⟹   XP_038528046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0743,397,113 - 43,402,323 (+)NCBI
RefSeq Acc Id: XM_038672119   ⟹   XP_038528047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0743,397,110 - 43,402,323 (+)NCBI
RefSeq Acc Id: XM_038672120   ⟹   XP_038528048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0743,397,110 - 43,402,323 (+)NCBI
RefSeq Acc Id: XM_038672121   ⟹   XP_038528049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0743,400,501 - 43,402,323 (+)NCBI
RefSeq Acc Id: XM_038672122   ⟹   XP_038528050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0743,400,711 - 43,402,323 (+)NCBI
RefSeq Acc Id: XM_038672123   ⟹   XP_038528051
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0743,400,723 - 43,402,323 (+)NCBI
RefSeq Acc Id: XM_547580   ⟹   XP_547580
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1743,447,423 - 43,452,625 (+)NCBI
Dog10K_Boxer_Tasha742,940,399 - 42,945,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_861080   ⟹   XP_866173
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1743,447,422 - 43,452,625 (+)NCBI
Dog10K_Boxer_Tasha742,940,396 - 42,945,609 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005622876 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277108 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277109 (Get FASTA)   NCBI Sequence Viewer  
  XP_038337855 (Get FASTA)   NCBI Sequence Viewer  
  XP_038337856 (Get FASTA)   NCBI Sequence Viewer  
  XP_038337857 (Get FASTA)   NCBI Sequence Viewer  
  XP_038337859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038337860 (Get FASTA)   NCBI Sequence Viewer  
  XP_038337861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399240 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399241 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399242 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399243 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399244 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399245 (Get FASTA)   NCBI Sequence Viewer  
  XP_038428743 (Get FASTA)   NCBI Sequence Viewer  
  XP_038463351 (Get FASTA)   NCBI Sequence Viewer  
  XP_038463352 (Get FASTA)   NCBI Sequence Viewer  
  XP_038463353 (Get FASTA)   NCBI Sequence Viewer  
  XP_038463354 (Get FASTA)   NCBI Sequence Viewer  
  XP_038463355 (Get FASTA)   NCBI Sequence Viewer  
  XP_038463356 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528046 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528047 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528049 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528050 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528051 (Get FASTA)   NCBI Sequence Viewer  
  XP_547580 (Get FASTA)   NCBI Sequence Viewer  
  XP_866173 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000025850.3
  ENSCAFP00030032355.1
  ENSCAFP00040005622.1
  ENSCAFP00845002778
  ENSCAFP00845002778.1
RefSeq Acc Id: XP_866173   ⟸   XM_861080
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_547580   ⟸   XM_547580
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005622876   ⟸   XM_005622819
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022277109   ⟸   XM_022421401
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022277108   ⟸   XM_022421400
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000025850   ⟸   ENSCAFT00000027800
RefSeq Acc Id: XP_038337857   ⟸   XM_038481929
RefSeq Acc Id: XP_038337856   ⟸   XM_038481928
RefSeq Acc Id: XP_038337855   ⟸   XM_038481927
RefSeq Acc Id: XP_038337859   ⟸   XM_038481931
RefSeq Acc Id: XP_038337860   ⟸   XM_038481932
RefSeq Acc Id: XP_038337861   ⟸   XM_038481933
RefSeq Acc Id: XP_038463353   ⟸   XM_038607425
RefSeq Acc Id: XP_038463352   ⟸   XM_038607424
RefSeq Acc Id: XP_038463351   ⟸   XM_038607423
RefSeq Acc Id: XP_038463354   ⟸   XM_038607426
RefSeq Acc Id: XP_038463355   ⟸   XM_038607427
RefSeq Acc Id: XP_038463356   ⟸   XM_038607428
RefSeq Acc Id: XP_038528048   ⟸   XM_038672120
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528047   ⟸   XM_038672119
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528046   ⟸   XM_038672118
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528049   ⟸   XM_038672121
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528050   ⟸   XM_038672122
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528051   ⟸   XM_038672123
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038428743   ⟸   XM_038572815
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399242   ⟸   XM_038543314
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399241   ⟸   XM_038543313
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399240   ⟸   XM_038543312
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399243   ⟸   XM_038543315
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399244   ⟸   XM_038543316
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399245   ⟸   XM_038543317
- UniProtKB: A0A8C0KBD6 (UniProtKB/TrEMBL),   A0A8C0NZ47 (UniProtKB/TrEMBL),   A0A8I3MRE6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845002778   ⟸   ENSCAFT00845003503
Protein Domains
EF-hand

Promoters
RGD ID:13684049
Promoter ID:EPDNEW_C2113
Type:initiation region
Name:S100A16_1
Description:S100 calcium binding protein A16
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1743,447,463 - 43,447,523EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017545 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030020211 UniProtKB/TrEMBL
  ENSCAFG00040003420 UniProtKB/TrEMBL
  ENSCAFG00845002007 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000027800.5 UniProtKB/TrEMBL
  ENSCAFT00030037094.1 UniProtKB/TrEMBL
  ENSCAFT00040006500.1 UniProtKB/TrEMBL
  ENSCAFT00845003503 ENTREZGENE
  ENSCAFT00845003503.1 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  S100/CaBP-9k_CS UniProtKB/TrEMBL
  S100_Ca-bd_sub UniProtKB/TrEMBL
KEGG Report cfa:490458 UniProtKB/TrEMBL
NCBI Gene S100A16 ENTREZGENE
PANTHER PTHR11639:SF76 UniProtKB/TrEMBL
  S100 CALCIUM-BINDING PROTEIN UniProtKB/TrEMBL
Pfam S_100 UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  S100_CABP UniProtKB/TrEMBL
SMART S_100 UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A8C0KBD6 ENTREZGENE
  A0A8C0NZ47 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MRE6 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:45827 ENTREZGENE