CEP72 (centrosomal protein 72) - Rat Genome Database

Name: CEP72
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: CEP72 (centrosomal protein 72) Canis lupus familiaris

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Symbol:

CEP72

Name:

centrosomal protein 72

RGD ID:

12407434

Description:

ENCODES a protein that exhibits identical protein binding (inferred); INVOLVED IN centriole replication (inferred); gamma-tubulin complex localization (inferred); regulation of protein localization to centrosome (inferred); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 2 (ortholog); dopamine transporter deficiency syndrome (ortholog); interstitial lung disease 2 (ortholog); FOUND IN centriolar satellite (inferred); centrosome (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

centrosomal protein of 72 kDa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CEP72 (centrosomal protein 72)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Cep72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cep72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cep72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CEP72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cep72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CEP72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CEP72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cep72 (centrosomal protein 72)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	11,639,794 - 11,684,041 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	11,649,221 - 11,685,767 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	16,141,869 - 16,195,347 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	11,532,589 - 11,586,247 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	11,540,282 - 11,586,229 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	11,583,276 - 11,636,989 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	11,563,186 - 11,617,544 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	11,773,889 - 11,827,585 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 2 (ISO)

dopamine transporter deficiency syndrome (ISO)

interstitial lung disease 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

centriole replication (IEA)

gamma-tubulin complex localization (IEA)

regulation of protein localization to centrosome (IEA)

spindle organization (IEA)

Cellular Component

centriolar satellite (IEA)

centrosome (IEA)

cytosol (IEA)

Molecular Function

identical protein binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CEP72
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	11,639,794 - 11,684,041 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	11,649,221 - 11,685,767 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	16,141,869 - 16,195,347 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	11,532,589 - 11,586,247 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	11,540,282 - 11,586,229 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	11,583,276 - 11,636,989 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	11,563,186 - 11,617,544 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	11,773,889 - 11,827,585 (-)	NCBI		UU_Cfam_GSD_1.0

CEP72
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	612,340 - 676,616 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	612,340 - 667,168 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	612,455 - 668,859 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	665,405 - 706,668 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	708,943 - 749,747 (+)	NCBI		Celera
Cytogenetic Map	5	p15.33	NCBI
HuRef	5	597,055 - 637,245 (+)	NCBI		HuRef
CHM1_1	5	609,681 - 649,065 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	610,390 - 666,525 (+)	NCBI		T2T-CHM13v2.0

Cep72
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,184,351 - 74,210,439 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,184,619 - 74,210,418 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	74,036,495 - 74,062,319 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	74,036,500 - 74,062,299 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,173,943 - 74,199,733 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,503,837 - 74,528,276 (-)	NCBI		MGSCv36	mm8
Celera	13	76,366,283 - 76,391,972 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.15	NCBI

Cep72
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	31,053,884 - 31,083,863 (+)	NCBI		GRCr8
mRatBN7.2	1	29,225,312 - 29,255,294 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	29,225,361 - 29,255,271 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	29,027,020 - 29,056,963 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	35,026,875 - 35,056,816 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	29,227,635 - 29,257,577 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	31,834,977 - 31,864,938 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	31,835,000 - 31,864,628 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	33,259,539 - 33,289,662 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	30,031,815 - 30,061,725 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	27,876,610 - 27,906,505 (+)	NCBI		Celera
Cytogenetic Map	1	p11	NCBI

Cep72
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	305,161 - 335,477 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955504	305,181 - 335,791 (+)	NCBI	ChiLan1.0	ChiLan1.0

CEP72
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	832,069 - 885,119 (+)	NCBI		NHGRI_mPanPan1-v2
PanPan1.1 Ensembl	5	733,647 - 772,323 (+)	Ensembl	panpan1.1		panPan2

Cep72
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	244,725,348 - 244,783,725 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936815	888,701 - 912,384 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936815	886,633 - 918,445 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CEP72
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	79,559,046 - 79,591,249 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	79,559,046 - 79,591,262 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CEP72
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	490,307 - 525,435 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	490,387 - 528,276 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666064	27,621,644 - 27,657,396 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cep72
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624751	332,428 - 352,664 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CEP72
469 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005639697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038445559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038462673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038462674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038583379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038647791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005306757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005317439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005349732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005383721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005417376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000017314 ⟹ ENSCAFP00000016025

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	11,649,315 - 11,685,767 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000038035 ⟹ ENSCAFP00000033698

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	34	11,649,221 - 11,685,765 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845048734 ⟹ ENSCAFP00845038236

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	11,540,282 - 11,586,229 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845048787 ⟹ ENSCAFP00845038278

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	11,549,262 - 11,586,229 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845048833 ⟹ ENSCAFP00845038314

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	34	11,549,409 - 11,584,624 (-)	Ensembl

RefSeq Acc Id:

XM_005639697 ⟹ XP_005639754

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	34	11,648,917 - 11,684,041 (-)	NCBI
Dog10K_Boxer_Tasha	34	16,158,689 - 16,193,857 (-)	NCBI

Sequence:

show sequence

GAGCGGTTCGGGGCAGCCTTACTGGGTCCCTGGACCCAGAGGTCGTAACCTGAGCAGAAACGAA
GAAGAGACTGACGACCCTTATGGCTGAACTTCGGTCATTATCTATTCCTGGAACTTACCAAGAA
AAGATTACTCACCTAGGAAATTCCTTGATGCATTTAACGGGTCTAAAATCATTAGACCTCTCAC
GCAACTCCTTGGTGAGCCTAGAGGGCATTCAGTACCTGACTGCGTTGGAAAGTCTCAATCTCTA
CTACAACAGTATCTCCTCATTAGCAGAAGTGCTTTGGCTCCACTCCTTGACGGAACTCACAGAT
GTGGACTTCCGGCTGAACCCCGTCGTAAAGAATGAATCTGATTACCGCCTTTTTGTTGTGTACA
TGCTCCCGAAGCTCCGGCAGCTAGATGACCGTCCTGTGAGAGACAGTGAGCGGAAAGCATCCCG
GCTACAGTTTGCATCAGAGGAGTCACTCAACTCGAAGCAGAGCTTCCCAGCCGTTTTCACAGCC
GGAAGACTGTGTCACTCTAGGGCCATGTGTGCTGACCCCTCGGCCAAGAAATGCTTGGTCATGG
ATGCAGATGACGAGGCAGTCCTGAATCTCATCGCTGAGTGTGAGTGGGACTTGAGCAACCCTCC
TGGGAGCACAGGTTCCAGCCTGAGGGAGCAAGAGACTGACCTCCATAGTTCCCAAGACTCTGGA
CATCTGTTGAGTCCCCACTCAATGCAGCACCAGTGTGGGGACTCCATAAAGAAGGGCCACGAGA
GGAAGAAAGGCAGCTCTCGAGGGTGTGGTCCAGAGAAGAGGCTCCAGCACCAGTACTGTGGGGA
GCTCCCGCCACAGTGTGGGCCGCATGCACACTTTACCCCACACCCAGATTCCGCAGACATTGAG
GACCCAGCCGTGTCTCAGAAGTCAAGTTTGTCCACACAAAAGGTGGTAAATCCATTGCCTGTTC
CTGAAAAGTACAGGAAGCGAAGAATGCCTGGTGGGAGATTCCAGGCACCCGCCAACCAGGAGTT
TCTGAGCCACCTGGAGAAGCCTGCCATGCCCTCGAGCCCTGAGGAGACTCTGAGCAGGCACAGT
GCCTCCGAGGGCAGGAGTGAAAGGACCTTTTCTCACTCAGAGGTCTCAGAGCCAGAAGAGGAGA
GGCCCCACAGCAGGAGTGGCAGCGGAGAGGTGGCTCCCAGACTGTATTCAGCTGTGCCTCCTGG
GAAGAAGGCTGCCCTGGAGGTGATGCTTCTTGAGGCACTCCTCGACCTGGTGGACAGGTACTGG
AGTGGCTGCAAGTCCCTGCATGGCAATGAGGTGTTCCAAGCTCAGGCAAGACATATTTTGTCAT
CTGTGCAAGAATTTACAACAACTCAGGATAGTTCAACACTTGTGAGTGAAGAAATTAGCTACCT
TACTCTGGAAAACAAATCTCTACAGAAGCACCTTGCTGAGCAGCAGCAGCAGTACCGTGTAAAG
ATTAATGAGGTGGCATCAGAACTAAGCAACACACAGAAGGAGATGGATGACTTGAGGCAACATT
TAGACAAATCTTTGGAAGAGAATAGTAGCTTAAAGGCTCTTTTGTTCAGCATGAAAAAAGAAGC
AAAAAATGCAGACACTGCGGCTACATTAAATGTGCAGATCACTGGACTTCAAACAAGTGTGAAG
AGGCTCTCTGATGAGATTGTGGAATTAAAGCAGCATCTGACACACTATGACAAGATCCAGGAGC
TCACCCAGATGCTTCAGGAGAGCCACAGCTCCCTGGTCAGCACCAATGAGCATCTCCTGCAGGA
GCTGAGCCAGGTGCGGGCACAGCACCAGGCCGAGGTGGAGCAGCTGCATTGGAGCTACAAGGAG
CTCAAGAAGACTCTAGCCCTCTTCCCACATGGTAGCGCCAGCCTTGGAGGCTGCTAGCCCCACC
CCCACCCCTGGGCACCCATGCCTTGCCTCTGGGTTTTGTGGCCAGCGCATCTGTATTCGCTCTG
ACACAGCTAGTAAAATGTGGAAATTCCTTTCTACCTAGTGTTTGTGTTGGTGAGAGCTGGGTCT
TCTGTTCGTAATTATCTTAAATATTTTGAAAAGTATTTGGGGCCTGTAGCTCGATTTTCTAGAA
CATCCTGAGAAAGGATTGATCTGTCTATAGGTGAGTCTGTAAGGGTGTATATGGTGCAGGATTT
GCAAAGAGCTGGCAACTGGGATCATTATTCCCTCGGACTCCAGCACGCTGTTCCTGTGTCCTGA
AATACAACCGAGATCTTACCAAGAAAAAAAAAAAAAAAAGCCTTTCATGTGTTTTGAAACAACA
TACTGATATA

hide sequence

RefSeq Acc Id:

XM_038445557 ⟹ XP_038301485

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	11,549,421 - 11,586,247 (-)	NCBI

RefSeq Acc Id:

XM_038445558 ⟹ XP_038301486

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	11,549,421 - 11,584,596 (-)	NCBI

RefSeq Acc Id:

XM_038445559 ⟹ XP_038301487

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	11,549,421 - 11,586,247 (-)	NCBI

RefSeq Acc Id:

XM_038462673 ⟹ XP_038318601

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	34	16,158,689 - 16,195,347 (-)	NCBI

RefSeq Acc Id:

XM_038462674 ⟹ XP_038318602

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	34	16,158,689 - 16,195,347 (-)	NCBI

RefSeq Acc Id:

XM_038519733 ⟹ XP_038375661

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	11,600,091 - 11,636,989 (-)	NCBI

RefSeq Acc Id:

XM_038519734 ⟹ XP_038375662

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	11,600,091 - 11,635,532 (-)	NCBI

RefSeq Acc Id:

XM_038519735 ⟹ XP_038375663

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	11,600,091 - 11,636,989 (-)	NCBI

RefSeq Acc Id:

XM_038583377 ⟹ XP_038439305

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	11,790,739 - 11,827,585 (-)	NCBI

RefSeq Acc Id:

XM_038583378 ⟹ XP_038439306

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	11,790,739 - 11,825,929 (-)	NCBI

RefSeq Acc Id:

XM_038583379 ⟹ XP_038439307

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	11,790,739 - 11,827,585 (-)	NCBI

RefSeq Acc Id:

XM_038647789 ⟹ XP_038503717

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	11,580,001 - 11,617,544 (-)	NCBI

RefSeq Acc Id:

XM_038647790 ⟹ XP_038503718

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	11,580,001 - 11,615,199 (-)	NCBI

RefSeq Acc Id:

XM_038647791 ⟹ XP_038503719

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	11,580,001 - 11,617,544 (-)	NCBI

RefSeq Acc Id:

XR_005306757

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	34	11,532,589 - 11,586,247 (-)	NCBI

RefSeq Acc Id:

XR_005317439

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	34	16,141,869 - 16,195,347 (-)	NCBI

RefSeq Acc Id:

XR_005349732

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	34	11,583,276 - 11,636,989 (-)	NCBI

RefSeq Acc Id:

XR_005383721

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	34	11,773,889 - 11,827,585 (-)	NCBI

RefSeq Acc Id:

XR_005417376

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	34	11,563,186 - 11,617,544 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005639754	(Get FASTA)	NCBI Sequence Viewer
	XP_038301485	(Get FASTA)	NCBI Sequence Viewer
	XP_038301486	(Get FASTA)	NCBI Sequence Viewer
	XP_038301487	(Get FASTA)	NCBI Sequence Viewer
	XP_038318601	(Get FASTA)	NCBI Sequence Viewer
	XP_038318602	(Get FASTA)	NCBI Sequence Viewer
	XP_038375661	(Get FASTA)	NCBI Sequence Viewer
	XP_038375662	(Get FASTA)	NCBI Sequence Viewer
	XP_038375663	(Get FASTA)	NCBI Sequence Viewer
	XP_038439305	(Get FASTA)	NCBI Sequence Viewer
	XP_038439306	(Get FASTA)	NCBI Sequence Viewer
	XP_038439307	(Get FASTA)	NCBI Sequence Viewer
	XP_038503717	(Get FASTA)	NCBI Sequence Viewer
	XP_038503718	(Get FASTA)	NCBI Sequence Viewer
	XP_038503719	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000016025.5
	ENSCAFP00000033698.3
	ENSCAFP00000072319.1
	ENSCAFP00030012526.1
	ENSCAFP00030012604.1
	ENSCAFP00040040772.1
	ENSCAFP00040040789.1
	ENSCAFP00845038236.1
	ENSCAFP00845038278
	ENSCAFP00845038278.1
	ENSCAFP00845038314
	ENSCAFP00845038314.1

RefSeq Acc Id:	XP_005639754 ⟸ XM_005639697
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MNN2 (UniProtKB/TrEMBL), A0A8P0SQH9 (UniProtKB/TrEMBL), A0A8C0LBK7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAELRSLSIPGTYQEKITHLGNSLMHLTGLKSLDLSRNSLVSLEGIQYLTALESLNLYYNSISS LAEVLWLHSLTELTDVDFRLNPVVKNESDYRLFVVYMLPKLRQLDDRPVRDSERKASRLQFASE ESLNSKQSFPAVFTAGRLCHSRAMCADPSAKKCLVMDADDEAVLNLIAECEWDLSNPPGSTGSS LREQETDLHSSQDSGHLLSPHSMQHQCGDSIKKGHERKKGSSRGCGPEKRLQHQYCGELPPQCG PHAHFTPHPDSADIEDPAVSQKSSLSTQKVVNPLPVPEKYRKRRMPGGRFQAPANQEFLSHLEK PAMPSSPEETLSRHSASEGRSERTFSHSEVSEPEEERPHSRSGSGEVAPRLYSAVPPGKKAALE VMLLEALLDLVDRYWSGCKSLHGNEVFQAQARHILSSVQEFTTTQDSSTLVSEEISYLTLENKS LQKHLAEQQQQYRVKINEVASELSNTQKEMDDLRQHLDKSLEENSSLKALLFSMKKEAKNADTA ATLNVQITGLQTSVKRLSDEIVELKQHLTHYDKIQELTQMLQESHSSLVSTNEHLLQELSQVRA QHQAEVEQLHWSYKELKKTLALFPHGSASLGGC hide sequence

Ensembl Acc Id:

ENSCAFP00000033698 ⟸ ENSCAFT00000038035

Ensembl Acc Id:

ENSCAFP00000016025 ⟸ ENSCAFT00000017314

RefSeq Acc Id:	XP_038375663 ⟸ XM_038519735
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038375661 ⟸ XM_038519733
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038375662 ⟸ XM_038519734
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038503719 ⟸ XM_038647791
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038503717 ⟸ XM_038647789
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038503718 ⟸ XM_038647790
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038301487 ⟸ XM_038445559
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LBK7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038301485 ⟸ XM_038445557
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LBK7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038301486 ⟸ XM_038445558
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3Q2H4 (UniProtKB/TrEMBL), A0A8C0LBK7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038318602 ⟸ XM_038462674
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LBK7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038318601 ⟸ XM_038462673
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MME7 (UniProtKB/TrEMBL), A0A8C0LBK7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439307 ⟸ XM_038583379
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LBK7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439305 ⟸ XM_038583377
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LBK7 (UniProtKB/TrEMBL), A0A8C0TV29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038439306 ⟸ XM_038583378
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LBK7 (UniProtKB/TrEMBL), A0A8C0TS35 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845038278 ⟸ ENSCAFT00845048787

Ensembl Acc Id:

ENSCAFP00845038236 ⟸ ENSCAFT00845048734

Ensembl Acc Id:

ENSCAFP00845038314 ⟸ ENSCAFT00845048833

Protein Domains

U2A'/phosphoprotein 32 family A C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000010889	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007826	UniProtKB/TrEMBL
	ENSCAFG00040025048	UniProtKB/TrEMBL
	ENSCAFG00845027639	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000017314.5	UniProtKB/TrEMBL
	ENSCAFT00000038035.5	UniProtKB/TrEMBL
	ENSCAFT00000109937.1	UniProtKB/TrEMBL
	ENSCAFT00030014364.1	UniProtKB/TrEMBL
	ENSCAFT00030014454.1	UniProtKB/TrEMBL
	ENSCAFT00040046714.1	UniProtKB/TrEMBL
	ENSCAFT00040046730.1	UniProtKB/TrEMBL
	ENSCAFT00845048734.1	UniProtKB/TrEMBL
	ENSCAFT00845048787	ENTREZGENE
	ENSCAFT00845048787.1	UniProtKB/TrEMBL
	ENSCAFT00845048833	ENTREZGENE
	ENSCAFT00845048833.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	U2A'_phosphoprotein32A_C	UniProtKB/TrEMBL
KEGG Report	cfa:478632	UniProtKB/TrEMBL
NCBI Gene	CEP72	ENTREZGENE
PANTHER	HEAT SHOCK REGULATED 2	UniProtKB/TrEMBL
	PTHR23311:SF7	UniProtKB/TrEMBL
Pfam	LRR_9	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/TrEMBL
SMART	LRR_TYP	UniProtKB/TrEMBL
	LRRcap	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
UniProt	A0A8C0LBK7	ENTREZGENE
	A0A8C0MME7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MNN2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TS35	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TV29	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q163_CANLF	UniProtKB/TrEMBL
	A0A8I3Q2H4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3SAY0_CANLF	UniProtKB/TrEMBL
	A0A8P0SFU7_CANLF	UniProtKB/TrEMBL
	A0A8P0SQH9	ENTREZGENE
	A0A8P0TR10_CANLF	UniProtKB/TrEMBL
UniProt Secondary	A0A8P0SQH9	UniProtKB/TrEMBL
VGNC ID	VGNC:39136	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar