KLHL36 (kelch like family member 36) - Rat Genome Database

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Pathways
Gene: KLHL36 (kelch like family member 36) Canis lupus familiaris
Analyze
Symbol: KLHL36
Name: kelch like family member 36
RGD ID: 12373388
Description: ENCODES a protein that exhibits cullin family protein binding (inferred); INVOLVED IN protein ubiquitination (inferred); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kelch-like 36; kelch-like protein 36
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1567,828,301 - 67,854,113 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl567,832,694 - 67,846,013 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha567,842,892 - 67,868,693 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0568,061,929 - 68,087,690 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl568,066,701 - 68,077,131 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1568,076,370 - 68,102,190 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0567,911,501 - 67,937,143 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0568,326,142 - 68,351,975 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
KLHL36
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1567,828,301 - 67,854,113 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl567,832,694 - 67,846,013 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha567,842,892 - 67,868,693 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0568,061,929 - 68,087,690 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl568,066,701 - 68,077,131 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1568,076,370 - 68,102,190 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0567,911,501 - 67,937,143 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0568,326,142 - 68,351,975 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
KLHL36
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381684,648,511 - 84,667,686 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1684,643,425 - 84,667,837 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371684,682,117 - 84,701,292 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361683,239,632 - 83,253,417 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341683,239,631 - 83,253,416NCBI
Celera1668,984,322 - 68,998,096 (+)NCBICelera
Cytogenetic Map16q24.1NCBI
HuRef1670,435,069 - 70,448,923 (+)NCBIHuRef
CHM1_11686,093,710 - 86,107,492 (+)NCBICHM1_1
T2T-CHM13v2.01690,714,793 - 90,733,970 (+)NCBIT2T-CHM13v2.0
Klhl36
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398120,588,970 - 120,603,728 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8120,588,945 - 120,604,333 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm388119,862,231 - 119,876,989 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8119,862,266 - 119,876,995 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv378122,386,205 - 122,400,889 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368122,748,282 - 122,762,966 (+)NCBIMGSCv36mm8
Celera8124,078,901 - 124,093,589 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map868.52NCBI
Klhl36
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81964,830,218 - 64,851,251 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1964,836,877 - 64,851,250 (+)EnsemblGRCr8
mRatBN7.21947,921,590 - 47,942,627 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1947,921,590 - 47,942,620 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1954,715,923 - 54,736,945 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01955,396,664 - 55,417,692 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01957,609,612 - 57,630,578 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1958,627,767 - 58,648,800 (+)NCBI
Lyon_Normotensive1956,751,365 - 56,772,398 (+)NCBI
Lyon_Hypertensive1958,625,612 - 58,646,645 (+)NCBI
F344_StmMcwi1956,357,870 - 56,378,890 (+)NCBI
Rnor_6.01952,515,022 - 52,536,055 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1952,515,022 - 52,536,476 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01963,259,151 - 63,280,351 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41950,145,835 - 50,166,861 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1947,178,205 - 47,199,290 (+)NCBICelera
Cytogenetic Map19q12NCBI
Klhl36
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955541205,170 - 219,164 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_004955541205,170 - 218,943 (+)NCBIChiLan1.0ChiLan1.0
KLHL36
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21894,396,499 - 94,417,355 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116100,313,658 - 100,334,489 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01665,314,253 - 65,335,194 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11684,656,009 - 84,676,221 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1684,656,009 - 84,670,664 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
Klhl36
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap11557,552,043 - 57,563,621 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440934927,638,706 - 27,658,171 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366413,388,887 - 3,403,581 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366413,392,253 - 3,403,575 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLHL36
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl64,067,403 - 4,080,075 (-)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.164,062,563 - 4,080,183 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KLHL36
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1581,277,654 - 81,292,105 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_0236660475,680,033 - 5,699,789 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1570,050,442 - 70,064,859 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl570,050,757 - 70,064,682 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Klhl36
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247461,526,185 - 1,539,525 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Naked mole-rat maternal Ensembl749,600,059 - 49,610,467 (+)Ensembl
Klhl36
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11739,519,925 - 39,531,829 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in KLHL36
370 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005620639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038476960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038538139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038602257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038666872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_546799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000031737   ⟹   ENSCAFP00000029549
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl567,832,694 - 67,846,013 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000077623   ⟹   ENSCAFP00000053876
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl567,833,068 - 67,846,013 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845008352   ⟹   ENSCAFP00845006572
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl568,066,701 - 68,077,131 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845008355   ⟹   ENSCAFP00845006574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl568,066,701 - 68,077,131 (-)Ensembl
RefSeq Acc Id: XM_005620639   ⟹   XP_005620696
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1567,828,301 - 67,845,875 (-)NCBI
Dog10K_Boxer_Tasha567,842,892 - 67,860,395 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005620640   ⟹   XP_005620697
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1567,828,301 - 67,845,984 (-)NCBI
Dog10K_Boxer_Tasha567,842,892 - 67,860,579 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038476958   ⟹   XP_038332886
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1568,076,370 - 68,102,190 (-)NCBI
RefSeq Acc Id: XM_038476959   ⟹   XP_038332887
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1568,076,370 - 68,094,072 (-)NCBI
RefSeq Acc Id: XM_038476960   ⟹   XP_038332888
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1568,076,370 - 68,093,888 (-)NCBI
RefSeq Acc Id: XM_038538137   ⟹   XP_038394065
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0568,326,142 - 68,351,975 (-)NCBI
RefSeq Acc Id: XM_038538138   ⟹   XP_038394066
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0568,326,142 - 68,343,847 (-)NCBI
RefSeq Acc Id: XM_038538139   ⟹   XP_038394067
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0568,326,142 - 68,343,662 (-)NCBI
RefSeq Acc Id: XM_038602255   ⟹   XP_038458183
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0567,911,501 - 67,937,143 (-)NCBI
RefSeq Acc Id: XM_038602256   ⟹   XP_038458184
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0567,911,501 - 67,929,202 (-)NCBI
RefSeq Acc Id: XM_038602257   ⟹   XP_038458185
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0567,911,501 - 67,929,021 (-)NCBI
RefSeq Acc Id: XM_038666870   ⟹   XP_038522798
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0568,061,929 - 68,087,690 (-)NCBI
RefSeq Acc Id: XM_038666871   ⟹   XP_038522799
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0568,061,929 - 68,079,630 (-)NCBI
RefSeq Acc Id: XM_038666872   ⟹   XP_038522800
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0568,061,929 - 68,079,445 (-)NCBI
RefSeq Acc Id: XM_546799   ⟹   XP_546799
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1567,828,301 - 67,854,113 (-)NCBI
Dog10K_Boxer_Tasha567,842,892 - 67,868,693 (-)NCBI
Sequence:
RefSeq Acc Id: XP_546799   ⟸   XM_546799
- UniProtKB: A0A8C0JTI3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005620697   ⟸   XM_005620640
- UniProtKB: A0A8C0JTI3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005620696   ⟸   XM_005620639
- UniProtKB: A0A8C0JTI3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000053876   ⟸   ENSCAFT00000077623
Ensembl Acc Id: ENSCAFP00000029549   ⟸   ENSCAFT00000031737
RefSeq Acc Id: XP_038332886   ⟸   XM_038476958
RefSeq Acc Id: XP_038332887   ⟸   XM_038476959
RefSeq Acc Id: XP_038332888   ⟸   XM_038476960
RefSeq Acc Id: XP_038458183   ⟸   XM_038602255
RefSeq Acc Id: XP_038458184   ⟸   XM_038602256
RefSeq Acc Id: XP_038458185   ⟸   XM_038602257
RefSeq Acc Id: XP_038522798   ⟸   XM_038666870
- UniProtKB: A0A8I3MQW8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038522799   ⟸   XM_038666871
- UniProtKB: A0A8I3MQW8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038522800   ⟸   XM_038666872
- UniProtKB: A0A8I3MQW8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038394065   ⟸   XM_038538137
- UniProtKB: A0A8C0JTI3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038394066   ⟸   XM_038538138
- UniProtKB: A0A8C0JTI3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038394067   ⟸   XM_038538139
- UniProtKB: A0A8C0JTI3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845006572   ⟸   ENSCAFT00845008352
Ensembl Acc Id: ENSCAFP00845006574   ⟸   ENSCAFT00845008355
Protein Domains
BTB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019947 Ensembl
  ENSCAFG00845004673 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845008352 ENTREZGENE
  ENSCAFT00845008352.1 UniProtKB/TrEMBL
  ENSCAFT00845008355.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.420 UniProtKB/TrEMBL
  2.120.10.80 UniProtKB/TrEMBL
  Potassium Channel Kv1.1, Chain A UniProtKB/TrEMBL
InterPro BACK UniProtKB/TrEMBL
  BTB-kelch_protein UniProtKB/TrEMBL
  BTB/POZ_dom UniProtKB/TrEMBL
  Kelch-typ_b-propeller UniProtKB/TrEMBL
  Kelch_1 UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/TrEMBL
NCBI Gene KLHL36 ENTREZGENE
PANTHER LD33804P UniProtKB/TrEMBL
  PTHR45632:SF4 UniProtKB/TrEMBL
Pfam BACK UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
  Kelch_1 UniProtKB/TrEMBL
  Kelch_KLHDC2_KLHL20_DRC7 UniProtKB/TrEMBL
PIRSF Kelch-like_protein_gigaxonin UniProtKB/TrEMBL
PROSITE BTB UniProtKB/TrEMBL
SMART BACK UniProtKB/TrEMBL
  BTB UniProtKB/TrEMBL
  Kelch UniProtKB/TrEMBL
Superfamily-SCOP SSF117281 UniProtKB/TrEMBL
  SSF54695 UniProtKB/TrEMBL
UniProt A0A8C0JTI3 ENTREZGENE
  A0A8I3MQW8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MV91_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:42469 ENTREZGENE