NAPSA (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 1 | 106,351,842 - 106,361,592 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 106,318,488 - 106,374,987 (+) | Ensembl | | CanFam3.1 Ensembl | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 105,924,958 - 105,934,699 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 106,862,954 - 106,872,701 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 106,829,581 - 106,896,644 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 1 | 106,535,027 - 106,544,763 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 106,176,569 - 106,186,313 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 107,017,232 - 107,026,974 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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NAPSA (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 19 | 50,358,477 - 50,369,302 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 50,358,472 - 50,369,342 (-) | Ensembl | | GRCh38.p14 Ensembl | hg38 | GRCh38 | GRCh37 | 19 | 50,861,734 - 50,868,896 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 55,553,546 - 55,560,743 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 55,553,546 - 55,560,743 | NCBI | | | | | Celera | 19 | 47,911,985 - 47,919,182 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.33 | NCBI | | | | | HuRef | 19 | 47,199,888 - 47,207,085 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 50,863,518 - 50,870,712 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 53,446,012 - 53,456,870 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Napsa (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 7 | 44,221,869 - 44,236,270 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 44,221,804 - 44,236,295 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 7 | 44,572,445 - 44,586,846 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 44,572,380 - 44,586,862 (+) | Ensembl | | GRCm38.p6 Ensembl | mm10 | GRCm38 | MGSCv37 | 7 | 51,827,815 - 51,842,216 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 44,440,487 - 44,454,888 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 40,022,411 - 40,036,713 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | B3 | NCBI | | | | | cM Map | 7 | 28.84 | NCBI | | | | |
|
Napsa (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 1 | 104,200,967 - 104,213,603 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 1 | 104,200,960 - 104,213,608 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 1 | 95,064,726 - 95,077,101 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 95,064,900 - 95,077,094 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 1 | 100,450,303 - 100,462,481 (+) | NCBI | UTH_Rnor_SHR_Utx | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 108,922,947 - 108,935,138 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 102,213,368 - 102,225,554 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | | | | Dahl_SR_JrHsd | 1 | 102,838,136 - 102,850,331 (+) | NCBI | | | | | Lyon_Normotensive | 1 | 107,948,204 - 107,960,395 (+) | NCBI | | | | | Lyon_Hypertensive | 1 | 104,481,508 - 104,493,704 (+) | NCBI | | | | | F344_StmMcwi | 1 | 102,938,679 - 102,950,860 (+) | NCBI | | | | | Rnor_6.0 | 1 | 100,577,497 - 100,589,802 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 100,577,056 - 100,589,836 (+) | Ensembl | | Rnor_6.0 Ensembl | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 101,642,884 - 101,655,189 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 95,050,761 - 95,062,774 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 89,327,190 - 89,339,345 (+) | NCBI | | Celera | | | RGSC_v3.1 | 1 | 95,128,906 - 95,140,864 (+) | NCBI | | | | | Cytogenetic Map | 1 | q22 | NCBI | | | | |
|
Napsa (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955559 | 769,477 - 778,543 (+) | Ensembl | | ChiLan1.0 Ensembl | | | ChiLan1.0 | NW_004955559 | 769,555 - 777,970 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
NAPSA (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 20 | 56,423,327 - 56,435,810 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 58,344,656 - 58,357,209 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 47,321,581 - 47,333,307 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 56,225,421 - 56,232,978 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 56,225,421 - 56,232,822 (-) | Ensembl | | PanPan1.1 Ensembl | panPan2 | panpan1.1 |
|
Napsa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mIctTri1.hap1 | 15 | 6,055,470 - 6,063,239 (+) | NCBI | | mIctTri1.hap1 | | | HiC_Itri_2 | NW_024409349 | 22,328,347 - 22,340,805 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936889 | 204,384 - 208,110 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936889 | 204,337 - 216,795 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
NAPSA (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 6 | 55,221,205 - 55,230,449 (-) | Ensembl | | Sscrofa11.1 Ensembl | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 55,221,203 - 55,230,609 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 51,070,030 - 51,079,473 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
NAPSA (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mChlSab1.0.hap1 | 6 | 7,722,891 - 7,729,656 (+) | NCBI | | mChlSab1.0.hap1 | | | Vero_WHO_p1.0 | NW_023666073 | 23,402,227 - 23,408,910 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | | ChlSab1.1 | 6 | 43,416,721 - 43,428,423 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 43,416,338 - 43,428,297 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM |
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Napsa (Heterocephalus glaber - naked mole-rat) |
|
Napsa (Rattus rattus - black rat) |
|