HOXB13 (homeobox B13) - Rat Genome Database

Name: HOXB13
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: HOXB13 (homeobox B13) Canis lupus familiaris

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Symbol:

HOXB13

Name:

homeobox B13

RGD ID:

12254298

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); DNA-binding transcription repressor activity, RNA polymerase II-specific (inferred); INVOLVED IN epithelial cell maturation involved in prostate gland development (ortholog); morphogenesis of an epithelium (ortholog); prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); ductal carcinoma in situ (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); transcription regulator complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

homeobox protein Hox-B13

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HOXB13 (homeobox B13)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Hoxb13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Hoxb13 (homeo box B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hoxb13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HOXB13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hoxb13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HOXB13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HOXB13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hoxb13 (homeobox B13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	24,958,020 - 24,961,353 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	24,959,183 - 24,961,588 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	24,420,615 - 24,425,192 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	25,751,224 - 25,755,801 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	25,753,220 - 25,755,912 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	24,519,247 - 24,523,824 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	24,779,867 - 24,784,444 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	24,908,387 - 24,912,969 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

cervical cancer (ISO)

ductal carcinoma in situ (ISO)

endometrial cancer (ISO)

Familial Prostate Cancer (ISO)

hereditary breast ovarian cancer syndrome (ISO)

Hereditary Neoplastic Syndromes (ISO)

melanoma (ISO)

Neoplasm Invasiveness (ISO)

pancreatic carcinoma (ISO)

prostate cancer (ISO)

Prostate Cancer, Hereditary, 1 (ISO)

Prostate Cancer, Hereditary, 9 (ISO)

Prostatic Neoplasms (ISO)

renal cell carcinoma (ISO)

stomach cancer (ISO)

trichodontoosseous syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis (IEA)

epithelial cell maturation involved in prostate gland development (IEA,ISO)

morphogenesis of an epithelium (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IEA)

prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis (IEA,ISO)

prostate gland development (ISO)

regulation of DNA-templated transcription (IEA)

regulation of growth (IEA,ISO)

response to testosterone (ISO)

Cellular Component

nucleoplasm (IEA)

nucleus (IEA)

transcription regulator complex (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA)

methyl-CpG binding (IEA)

protein binding (ISO)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

HOXB13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	24,958,020 - 24,961,353 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	24,959,183 - 24,961,588 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	24,420,615 - 24,425,192 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	25,751,224 - 25,755,801 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	25,753,220 - 25,755,912 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	24,519,247 - 24,523,824 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	24,779,867 - 24,784,444 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	24,908,387 - 24,912,969 (-)	NCBI		UU_Cfam_GSD_1.0

HOXB13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	48,724,763 - 48,728,750 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	48,724,763 - 48,728,750 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	46,802,125 - 46,806,112 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	44,157,124 - 44,161,110 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	44,158,866 - 44,161,084	NCBI
Celera	17	43,256,271 - 43,260,259 (-)	NCBI		Celera
Cytogenetic Map	17	q21.32	NCBI
HuRef	17	42,171,017 - 42,175,003 (-)	NCBI		HuRef
CHM1_1	17	46,868,110 - 46,872,096 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	49,588,364 - 49,592,351 (-)	NCBI		T2T-CHM13v2.0

Hoxb13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	96,085,142 - 96,087,436 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	96,085,142 - 96,088,273 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	96,194,316 - 96,196,610 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	96,194,316 - 96,197,447 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	96,055,675 - 96,057,913 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	96,010,451 - 96,012,689 (+)	NCBI		MGSCv36	mm8
Celera	11	105,845,408 - 105,847,646 (+)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	59.63	NCBI

Hoxb13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	81,657,074 - 81,659,347 (+)	NCBI		GRCr8
mRatBN7.2	10	81,160,498 - 81,162,777 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	81,160,498 - 81,162,777 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	86,109,811 - 86,112,084 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	85,607,837 - 85,610,110 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	81,000,052 - 81,002,325 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	84,031,955 - 84,034,228 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	84,031,955 - 84,034,228 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	83,834,616 - 83,836,889 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	84,925,520 - 84,927,793 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	84,939,948 - 84,942,992 (+)	NCBI
Celera	10	79,927,218 - 79,929,491 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

Hoxb13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	12,536,415 - 12,538,169 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	12,536,415 - 12,538,169 (+)	NCBI	ChiLan1.0	ChiLan1.0

HOXB13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	16,373,643 - 16,377,926 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	18,339,516 - 18,343,512 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	8,807,988 - 8,810,362 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	8,994,224 - 8,996,598 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	8,994,224 - 8,996,598 (+)	Ensembl	panpan1.1		panPan2

Hoxb13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	24,384,231 - 24,386,567 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	12,688,559 - 12,690,908 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	12,688,572 - 12,690,908 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HOXB13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	24,947,687 - 24,950,714 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	24,948,307 - 24,950,661 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	24,904,057 - 24,905,982 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HOXB13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	69,137,561 - 69,141,615 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	69,137,585 - 69,139,382 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	40,235,168 - 40,239,485 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hoxb13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	5,198,751 - 5,200,961 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	5,198,805 - 5,201,079 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in HOXB13
20 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	31	20	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038485815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038547593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038611568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038676766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_548180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000026707 ⟹ ENSCAFP00000024813

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	24,959,183 - 24,961,588 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845017553 ⟹ ENSCAFP00845013662

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	25,753,220 - 25,755,912 (-)	Ensembl

RefSeq Acc Id:

XM_038485815 ⟹ XP_038341743

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	24,519,247 - 24,523,824 (-)	NCBI

RefSeq Acc Id:

XM_038547593 ⟹ XP_038403521

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	24,908,387 - 24,912,969 (-)	NCBI

RefSeq Acc Id:

XM_038611568 ⟹ XP_038467496

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	24,779,867 - 24,784,444 (-)	NCBI

RefSeq Acc Id:

XM_038676766 ⟹ XP_038532694

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	25,751,224 - 25,755,801 (-)	NCBI

RefSeq Acc Id:

XM_548180 ⟹ XP_548180

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	24,958,020 - 24,961,353 (-)	NCBI
Dog10K_Boxer_Tasha	9	24,420,615 - 24,425,192 (-)	NCBI

Sequence:

show sequence

CTGGGAGCGATTTAAAACGCCTTGGATTCCCGGGGCCTGGGTGGGGAGAGACGGCTGGGTGCCC
CCCGGATCCCCCCGCCCCAGCGCCCCATGAGCGGACCCTCGGCCCCATGGAGCCCGGCGACTAC
GCCACCCTGGACGGGGCCAAGGACCTGGAAGGCTTGTCGGTAGTGGGAGGGGGTCGGAATCTCG
TGGCCCCGTCGCCGCTGGCCACCCACCCGGCCGCGGCGCCTCCGCTGATGCCCGCTGTCAGCTA
CGCGCCGCTGGATCTGCCGGGCCCCGCGGAACCGCCGAAGCAGTGCCACCCTTGCCCCGGGGTG
CCCCAGGGGGCGGCCCCGGCTCCGGTGCCTTACGGCTACTTTGGAGGCGGGTACTACTCCTGCC
GGGTGGCCCGGAGCTCGCTGAAACCCTGTGCCCAGGCGGCCACCCTCGCTGCCTACCCCGCGGA
GACGGCCACGGCCGGGGAGGAGTACCCCAGCCGACCCACCGAGTTTGCCTTCTATCCTGGGTAC
CCGGGACCCTACCAGCCAATGGCCAGTTACCTGGATGTGTCGGTGGTGCAGACTCTGGGAGCCC
CCGGGGAGCCTCGCCACGACTCCCTGCTGCCTGTGGACAGTTACCAGCCCTGGGCCCTCACCGG
TGGCTGGAACGGCCAGATGTGTTGCCAGGGGGAGCAGAACCCACCCAGTGCCTTCTGGAAGGCA
GCATTTGCAGAGTCAGGCACACAGCACCCTCCTGATGGTTGTGCCTTCCGACGTGGCCGTAAGA
AGCGCATTCCTTACAGCAAGGGGCAGTTGCGGGAGCTGGAGCGCGAGTATTCAGCTAACAAGTT
CATCACCAAGGACAAGAGGCGTAAGATCTCTGCGGCCACCAGCCTTTCAGAGCGCCAGATCACC
ATCTGGTTTCAGAACCGCCGGGTTAAGGAGAAGAAAGTCCTTGCCAAGGTCAAGACCAGCACTA
CTCTGTGAGGGAGATCCCTGGCTGGGGGAGTGGGGGAGAAATGGAAGTATCCTAGGGAAACCAG
GAGCCTGCCAGCGCCAGGCTGGAGCACAGGACTCTGCCGAGGGGCTCCCAGAGGTTGCACTCTT
CCCAGGCCACAGCTCCTGGGCTGTTCCTCAGGGATGGCCTGGGTGCCCCCATATGTTTTAGGGA
GCCAGTGAGGCCCAGAGTTACAGTCCAATCCACCAGAGCCACATACCACCCACAGGACCTGTCG
CCAGTCACAATCATTCATCCTGGTAGTGGTAATAGTCACCATAACCAGTATGAGTTGCCATGAT
AATTAGTTTCAAATTTTTATCTAGAGCTCTGAAGAGCACTTGAGAAACTGCTTGCATGGATTGA
ACTGATAATGAATAAACTTGGAGGGAGACCCAAGGCAGGGAAGCTTCCTTTGCATCCACATCCA
TTTCCAAATCCTGTCCCCCACCCCAGTGATTGCAGCAGATAGGAGAAAAGGCAGATTCACTCCT
GTGACTACCATTGCTCATTTGGCATTTTTCTAAGATGACCCCTGGGCAGGATGGACAACACTGG
GGGGTACCTCTCCCTCCCTCCCTGCCCACACCCTGGGTTGTATGCTGAGGTCTCAGAAATCCCA
TCCTTAACTCTTAGATTTTGTCCTTGTGTGAAAATGAAGCCAGTGAACTGCCCTCCTGAGTCCT
CCTGCCTCCAGAAAAACTGAGTTTGAGAAAGCTCCTGGATAATTCATCATCTCTCATTTCCTCC
CCTAAACTTTCCAAGTCTTCCCTTAACAATCCTGGTGGTTCTGTCCAGGTTATAGTTCATTGGG
GCATTTGGGAGTTGCATGAAATAGGTATTTGTGGCCTTGTAGACGTCCCCCTCCCAGGCACAAA
TAGTTACAGAACTAGGGAGTAGAACGCTACCCTATTGGCAGGCACATCACAAACACGCTGGAAT
AGCCAGGCTGGAAAGAAAACCAGAAAATGGCCCTTCACCACCCATTCTCCCTCTGCTTTGCTTC
TACTTGACATCAGGAGAAGTTGTGGGTCCCAAGCCTGGGAGATGGGTCAGGCCCCTTTGTGAGT
GAAAAAACAGTGGGTGGCAGAAGCGCAAAGACCCAGGTGAGGCGTCTTAGGCAAGAGTGGCTGC
AGATCTCTTTCCTTTTCACTTTGTGCTGGTTTGGTCCAACTACCCTGAATCCTGGGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_038341743	(Get FASTA)	NCBI Sequence Viewer
	XP_038403521	(Get FASTA)	NCBI Sequence Viewer
	XP_038467496	(Get FASTA)	NCBI Sequence Viewer
	XP_038532694	(Get FASTA)	NCBI Sequence Viewer
	XP_548180	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000024813.2
	ENSCAFP00030002922.1
	ENSCAFP00040008340.1
	ENSCAFP00845013662
	ENSCAFP00845013662.1

RefSeq Acc Id:

XP_548180 ⟸ XM_548180

- UniProtKB:

A0A8C0LBL4 (UniProtKB/TrEMBL), A0A8C0LWY6 (UniProtKB/TrEMBL), A0A8I3RVJ4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPGDYATLDGAKDLEGLSVVGGGRNLVAPSPLATHPAAAPPLMPAVSYAPLDLPGPAEPPKQC
HPCPGVPQGAAPAPVPYGYFGGGYYSCRVARSSLKPCAQAATLAAYPAETATAGEEYPSRPTEF
AFYPGYPGPYQPMASYLDVSVVQTLGAPGEPRHDSLLPVDSYQPWALTGGWNGQMCCQGEQNPP
SAFWKAAFAESGTQHPPDGCAFRRGRKKRIPYSKGQLRELEREYSANKFITKDKRRKISAATSL
SERQITIWFQNRRVKEKKVLAKVKTSTTL

hide sequence

Ensembl Acc Id:

ENSCAFP00000024813 ⟸ ENSCAFT00000026707

RefSeq Acc Id:

XP_038341743 ⟸ XM_038485815

RefSeq Acc Id:

XP_038467496 ⟸ XM_038611568

RefSeq Acc Id:	XP_038532694 ⟸ XM_038676766
- UniProtKB:	A0A8C0LBL4 (UniProtKB/TrEMBL), A0A8C0LWY6 (UniProtKB/TrEMBL), A0A8I3RVJ4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038403521 ⟸ XM_038547593
- UniProtKB:	A0A8C0LBL4 (UniProtKB/TrEMBL), A0A8C0LWY6 (UniProtKB/TrEMBL), A0A8I3RVJ4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845013662 ⟸ ENSCAFT00845017553

Protein Domains

Homeobox

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000016870	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030001808	UniProtKB/TrEMBL
	ENSCAFG00040005153	UniProtKB/TrEMBL
	ENSCAFG00845009992	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000026707.4	UniProtKB/TrEMBL
	ENSCAFT00030003293.1	UniProtKB/TrEMBL
	ENSCAFT00040009624.1	UniProtKB/TrEMBL
	ENSCAFT00845017553	ENTREZGENE
	ENSCAFT00845017553.1	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
InterPro	AP_axis_regulatory_Homeobox	UniProtKB/TrEMBL
	Homeobox-like_sf	UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/TrEMBL
	Homeobox_dom	UniProtKB/TrEMBL
	HoxA13_N	UniProtKB/TrEMBL
KEGG Report	cfa:491060	UniProtKB/TrEMBL
NCBI Gene	HOXB13	ENTREZGENE
PANTHER	HOMEOBOX PROTEIN HOX-B13	UniProtKB/TrEMBL
	SEGMENTATION PROTEIN FUSHI TARAZU-LIKE PROTEIN	UniProtKB/TrEMBL
Pfam	Homeodomain	UniProtKB/TrEMBL
	HoxA13_N	UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/TrEMBL
SMART	HOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46689	UniProtKB/TrEMBL
UniProt	A0A8C0LBL4	ENTREZGENE
	A0A8C0LWY6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RVJ4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41750	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM