GPAA1 (glycosylphosphatidylinositol anchor attachment 1)

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Gene: GPAA1 (glycosylphosphatidylinositol anchor attachment 1) Canis lupus familiaris

Analyze

Symbol:

GPAA1

Name:

glycosylphosphatidylinositol anchor attachment 1

RGD ID:

12215829

Description:

ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (inferred); ASSOCIATED WITH Brown-Vialetto-Van Laere syndrome 2 (ortholog); epidermolysis bullosa simplex with muscular dystrophy (ortholog); genetic disease (ortholog); FOUND IN centrosome (inferred); cytosol (inferred); endoplasmic reticulum (inferred); INTERACTS WITH mocetinostat

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

glycosylphosphatidylinositol anchor attachment 1 (GPAA1); glycosylphosphatidylinositol anchor attachment 1 protein; glycosylphosphatidylinositol anchor attachment protein 1 homolog; GPAA1P anchor attachment protein 1 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	37,577,162 - 37,580,346 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	37,576,354 - 37,580,345 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	37,540,819 - 37,543,992 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	38,053,394 - 38,056,568 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	38,053,345 - 38,069,424 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	37,725,487 - 37,728,658 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	37,853,701 - 37,856,859 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,330,285 - 38,333,466 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brown-Vialetto-Van Laere syndrome 2 (ISO)

epidermolysis bullosa simplex with muscular dystrophy (ISO)

genetic disease (ISO)

Glycosylphosphatidylinositol Biosynthesis Defect 15 (ISO)

holoprosencephaly (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

mocetinostat (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

attachment of GPI anchor to protein (IEA)

Cellular Component

centrosome (IEA)

cytosol (IEA)

endoplasmic reticulum (IEA)

GPI-anchor transamidase complex (IEA)

membrane (IEA)

mitochondrion (IEA)

Molecular Function

electron transfer activity (IEA)

GPI anchor binding (IEA,ISO)

heme binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:10393431	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GPAA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	37,577,162 - 37,580,346 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	37,576,354 - 37,580,345 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	37,540,819 - 37,543,992 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	38,053,394 - 38,056,568 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	38,053,345 - 38,069,424 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	37,725,487 - 37,728,658 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	37,853,701 - 37,856,859 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,330,285 - 38,333,466 (+)	NCBI		UU_Cfam_GSD_1.0

GPAA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	144,082,634 - 144,086,216 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	144,082,337 - 144,093,149 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	145,137,537 - 145,141,119 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	145,209,512 - 145,213,107 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	145,209,526 - 145,213,102	NCBI
Celera	8	141,475,157 - 141,478,683 (+)	NCBI		Celera
Cytogenetic Map	8	q24.3	NCBI
HuRef	8	140,413,426 - 140,417,021 (+)	NCBI		HuRef
CHM1_1	8	145,177,776 - 145,181,371 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	145,243,485 - 145,247,067 (+)	NCBI		T2T-CHM13v2.0

Gpaa1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	76,215,494 - 76,219,099 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	76,215,431 - 76,219,107 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	76,331,294 - 76,334,900 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	76,331,231 - 76,334,907 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	76,161,724 - 76,165,329 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	76,158,549 - 76,162,154 (+)	NCBI		MGSCv36	mm8
Celera	15	77,831,354 - 77,834,959 (+)	NCBI		Celera
Cytogenetic Map	15	D3	NCBI
cM Map	15	35.72	NCBI

Gpaa1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	109,932,556 - 109,936,139 (+)	NCBI		GRCr8
mRatBN7.2	7	108,051,896 - 108,055,479 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	108,051,861 - 108,055,484 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	109,795,563 - 109,799,146 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	112,019,257 - 112,022,840 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	111,977,711 - 111,981,294 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	117,394,367 - 117,397,950 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,394,372 - 117,397,956 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,381,997 - 117,385,580 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,378,978 - 114,382,561 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	114,413,207 - 114,416,790 (+)	NCBI
Celera	7	104,404,246 - 104,407,829 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Gpaa1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	2,735,463 - 2,738,956 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	2,735,463 - 2,738,956 (+)	NCBI	ChiLan1.0	ChiLan1.0

LOC100979844
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	17,768,812 - 17,773,809 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	17,771,585 - 17,781,036 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	91,716,647 - 91,721,082 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	111,487,498 - 111,510,259 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	143,840,524 - 143,845,352 (+)	Ensembl	panpan1.1		panPan2

Gpaa1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	666,664 - 670,968 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	8,092,855 - 8,096,074 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	8,092,758 - 8,096,277 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPAA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	614,601 - 618,241 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	614,596 - 618,274 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	767,760 - 771,431 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPAA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,295,851 - 138,299,461 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,296,002 - 138,299,370 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	1,573,518 - 1,577,182 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gpaa1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	12,739,750 - 12,743,223 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	12,739,750 - 12,743,219 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GPAA1
59 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038423566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038494072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038494073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_532350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB017264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000002378 ⟹ ENSCAFP00000002200

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	13	37,577,152 - 37,580,345 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000045933 ⟹ ENSCAFP00000042355

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	13	37,577,265 - 37,580,345 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000081541 ⟹ ENSCAFP00000044307

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	13	37,576,354 - 37,580,345 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013567 ⟹ ENSCAFP00845010533

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	38,053,345 - 38,056,568 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013661 ⟹ ENSCAFP00845010608

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	38,053,374 - 38,069,424 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013788 ⟹ ENSCAFP00845010700

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	38,053,440 - 38,058,073 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013873 ⟹ ENSCAFP00845010760

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	38,053,487 - 38,069,424 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013975 ⟹ ENSCAFP00845010828

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	38,053,487 - 38,056,568 (+)	Ensembl

RefSeq Acc Id:

XM_038423566 ⟹ XP_038279494

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	13	37,540,819 - 37,543,992 (+)	NCBI

RefSeq Acc Id:

XM_038494072 ⟹ XP_038350000

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	37,725,487 - 37,728,658 (+)	NCBI

RefSeq Acc Id:

XM_038494073 ⟹ XP_038350001

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	37,725,487 - 37,728,658 (+)	NCBI

RefSeq Acc Id:

XM_038555107 ⟹ XP_038411035

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	38,330,285 - 38,333,466 (+)	NCBI

RefSeq Acc Id:

XM_038555108 ⟹ XP_038411036

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	38,330,285 - 38,333,466 (+)	NCBI

RefSeq Acc Id:

XM_038618989 ⟹ XP_038474917

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	37,853,701 - 37,856,859 (+)	NCBI

RefSeq Acc Id:

XM_038618990 ⟹ XP_038474918

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	37,853,701 - 37,856,859 (+)	NCBI

RefSeq Acc Id:

XM_038684592 ⟹ XP_038540520

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	38,053,394 - 38,056,568 (+)	NCBI

RefSeq Acc Id:

XM_038684593 ⟹ XP_038540521

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	38,053,394 - 38,056,568 (+)	NCBI

RefSeq Acc Id:

XM_532350 ⟹ XP_532350

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	37,577,162 - 37,580,346 (+)	NCBI
Dog10K_Boxer_Tasha	13	37,540,819 - 37,543,992 (+)	NCBI

Sequence:

show sequence

GGCGGGCGCGCCGCCTCGGCGGGACGGGAGCGCCGCGCGGGGTCGGCGGCGGGAGTGGGCGGTG
AGCGAGGACCCCGAGCCCCCGGAGCCGCCGGCGCCCGCCATGGGCCTCCTGTCGGACCCGGTGC
GCCGGCGCGCCCTCGCCCGCCTGGTGCTGCGGCTGAACGCGCCGCTGTGCGCGCTGAGCTACGC
GGCGGGCGTCGCCTGGTTCCTGGCGCTGGCCTTCCCGCCGCTGACGCAGCGCACCTACATGTCG
GAGAACGCCATGGGCTCCACCATGGTGGAGGAGCAGTTCGCGGGCGGGGAGCGCGCCCGGGGCT
GGGCCCGCGACTTCGCGGCGCACCGCAGGAAGGCGGGGGCTCTGCCGGCGGCCTGGCTGGAGCG
TGCCATGCGGTCCGTGGGGCTGGAGGTGTACACGCAGAGCTTCTCCCGGAAACTGCCCTTTCCC
GACGAGGCCCACGAGCGCTATATGGTGTCGGGCACCAACGTGTACGGCATCCTGCGGGCCCCGC
GCGCCGCCAGCACCGAGTCCCTGGTGCTCACCGTGCCCTGTGGCTCCGACGCCACCAACAGCCA
GGCTGTGGGGCTGCTGCTGGCACTTGCTGCCCACTTTCGGGGGCAGATTTACTGGGCCAAAGAC
ATCATCTTCTTGGTGACAGAGCAAGACCTCCTGGGCACGGAGGCCTGGCTTGAGGCCTACCACG
ACGTCAACGTCACCGGCATGCAGTCCTCCCCTCTGCAGGGCCGGGCTGGGGCGATCCAGGCAGC
TGTGGCCCTGGAGCTGAGCACTGATGTGGTCACTAGCCTGGACGTGGCCGTGGAGGGGCTCAAT
GGGCAGCTGCCCAACCTCGATCTGCTCAACCTCTTCCAGACTTTCTGTCAGAAAGGGGGGCTGC
TGTGTACTCTGCAGGGCAAGCTGCAGCCCCAGGACTGGACGTCAGTAGACGGGCCGCTGCAGGG
CCTGCAGACACTCCTGCTCATGGTTCTGCAGCAGGCCTCTGGCCGCCCCCACGGTCCTCACGGC
CTGTTCTTGCGCTACCGCGTGGAGGCCCTGACTATCCGCGGCATCAACAGCTTCCGACAGTACA
AGTATGACTTGGTGGCAGTGGGCAAGGCCCTGGAGGGCGTGTTCCGCAAACTCAACCACCTCCT
GGAGCGCCTGCACCAGTCCTTCTTCTTCTACCTGCTGCCTGCACTTTCCCGCTTCGTCTCCATC
GGCCTCTACATGCCTGCTGTCGGCTTCTTGCTCTTAGTCCTTGGCCTCAAGGTTCTGAACTTGT
GGATCCATTTCCACGAGGCGGTTGTGGGCCCCGAGGAGGCTGGGGGGGGCCCTGAATCTAGTTC
TCCTCTCCAGCCAGCACAGAGTGTGGGGCTGGCCTCGCTTGTGGCGCCTTTGCTGATCTCACAA
GCCATGGGCCTGGCCCTCTACATCCTGCCAGTGCTGGGCCAACACGTGGCCACCCAGCACTTCC
CCGTGGCTGAGGCCGAGGCCGTGGTGCTGACCTTGCTGGCCATCTATGCAGCCGGCTTGGCCCT
TCCACACAGCACCCAGCGGGTGGTGAGTGCACGGGCCCCAGACAGAGGCTGGATGGCGCTGAAG
CTCGTGGCCATCATCTACCTGGCGCTACAATTGGCCTGCATCGCCCTCACCAACTTCTCACTGG
GCTTCCTGCTGGCTGTCACCATGGTGCCCGCTGCGGCGCTCACGAAGCCCTATGGGCCCCGGCC
ACTCTATGCTACCCTGTTGGTGCTGACGAGCCCCGCAGCCACGCTCCTGGGCAGCCTGTTCCTT
TGGCGAGAGCTGCAGGAGGCGCCGCTGTCGCTGGCCGAGGGCTGGCAGCTGTTCCTGGTGGCAG
TGGCCCAGGGTGTGCTGGAACACCATACCTATGGCGCCATGCTCTTTCCACTGCTGGCTCTGGG
CCTCTACCCCTGCTGGCTGCTTTTCTGGAATGTGCTCTTCTGGAAGTGATGCGTGGCTGCCCTG
CAGTGTAGACTCTGGGTGGGAGCTCCCCCAGCACCCCCGTGTTGTCTCCTTGGGAAATAAACAG
GAGTTTTGTTTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038279494	(Get FASTA)	NCBI Sequence Viewer
	XP_038350000	(Get FASTA)	NCBI Sequence Viewer
	XP_038350001	(Get FASTA)	NCBI Sequence Viewer
	XP_038411035	(Get FASTA)	NCBI Sequence Viewer
	XP_038411036	(Get FASTA)	NCBI Sequence Viewer
	XP_038474917	(Get FASTA)	NCBI Sequence Viewer
	XP_038474918	(Get FASTA)	NCBI Sequence Viewer
	XP_038540520	(Get FASTA)	NCBI Sequence Viewer
	XP_038540521	(Get FASTA)	NCBI Sequence Viewer
	XP_532350	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA82584	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000002200.5
	ENSCAFP00000042355.3
	ENSCAFP00030041207.1
	ENSCAFP00030041229.1
	ENSCAFP00040020470.1
	ENSCAFP00040020556.1
	ENSCAFP00040020645.1
	ENSCAFP00845010533
	ENSCAFP00845010533.1
	ENSCAFP00845010608.1
	ENSCAFP00845010700.1
	ENSCAFP00845010828.1

RefSeq Acc Id:	XP_532350 ⟸ XM_532350
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0R3N4 (UniProtKB/TrEMBL), A0A8C0SGN2 (UniProtKB/TrEMBL), A0A8P0S7G3 (UniProtKB/TrEMBL), A0A8C0PPI5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGLLSDPVRRRALARLVLRLNAPLCALSYAAGVAWFLALAFPPLTQRTYMSENAMGSTMVEEQF AGGERARGWARDFAAHRRKAGALPAAWLERAMRSVGLEVYTQSFSRKLPFPDEAHERYMVSGTN VYGILRAPRAASTESLVLTVPCGSDATNSQAVGLLLALAAHFRGQIYWAKDIIFLVTEQDLLGT EAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSTDVVTSLDVAVEGLNGQLPNLDLLNLFQ TFCQKGGLLCTLQGKLQPQDWTSVDGPLQGLQTLLLMVLQQASGRPHGPHGLFLRYRVEALTIR GINSFRQYKYDLVAVGKALEGVFRKLNHLLERLHQSFFFYLLPALSRFVSIGLYMPAVGFLLLV LGLKVLNLWIHFHEAVVGPEEAGGGPESSSPLQPAQSVGLASLVAPLLISQAMGLALYILPVLG QHVATQHFPVAEAEAVVLTLLAIYAAGLALPHSTQRVVSARAPDRGWMALKLVAIIYLALQLAC IALTNFSLGFLLAVTMVPAAALTKPYGPRPLYATLLVLTSPAATLLGSLFLWRELQEAPLSLAE GWQLFLVAVAQGVLEHHTYGAMLFPLLALGLYPCWLLFWNVLFWK hide sequence

Ensembl Acc Id:

ENSCAFP00000042355 ⟸ ENSCAFT00000045933

Ensembl Acc Id:

ENSCAFP00000002200 ⟸ ENSCAFT00000002378

Ensembl Acc Id:

ENSCAFP00000044307 ⟸ ENSCAFT00000081541

RefSeq Acc Id:	XP_038350000 ⟸ XM_038494072
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038350001 ⟸ XM_038494073
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038474917 ⟸ XM_038618989
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474918 ⟸ XM_038618990
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038540520 ⟸ XM_038684592
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0R3N4 (UniProtKB/TrEMBL), A0A8C0SGN2 (UniProtKB/TrEMBL), A0A8P0S7G3 (UniProtKB/TrEMBL), A0A8C0PPI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540521 ⟸ XM_038684593
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038279494 ⟸ XM_038423566
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038411035 ⟸ XM_038555107
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PPI5 (UniProtKB/TrEMBL), A0A8C0R3N4 (UniProtKB/TrEMBL), A0A8C0SGN2 (UniProtKB/TrEMBL), A0A8P0S7G3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411036 ⟸ XM_038555108
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCAFP00845010828 ⟸ ENSCAFT00845013975

Ensembl Acc Id:

ENSCAFP00845010608 ⟸ ENSCAFT00845013661

Ensembl Acc Id:

ENSCAFP00845010700 ⟸ ENSCAFT00845013788

Ensembl Acc Id:

ENSCAFP00845010760 ⟸ ENSCAFT00845013873

Ensembl Acc Id:

ENSCAFP00845010533 ⟸ ENSCAFT00845013567

Promoters

RGD ID:

13685627

Promoter ID:

EPDNEW_C3695

Type:

initiation region

Name:

GPAA1_1

Description:

glycosylphosphatidylinositol anchor attachment 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	37,577,171 - 37,577,231	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000001523	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030025525	UniProtKB/TrEMBL
	ENSCAFG00040012682	UniProtKB/TrEMBL
	ENSCAFG00845007719	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000002378.5	UniProtKB/TrEMBL
	ENSCAFT00000045933.4	UniProtKB/TrEMBL
	ENSCAFT00030047136.1	UniProtKB/TrEMBL
	ENSCAFT00030047159.1	UniProtKB/TrEMBL
	ENSCAFT00040023582.1	UniProtKB/TrEMBL
	ENSCAFT00040023672.1	UniProtKB/TrEMBL
	ENSCAFT00040023771.1	UniProtKB/TrEMBL
	ENSCAFT00845013567	ENTREZGENE
	ENSCAFT00845013567.1	UniProtKB/TrEMBL
	ENSCAFT00845013661.1	UniProtKB/TrEMBL
	ENSCAFT00845013788.1	UniProtKB/TrEMBL
	ENSCAFT00845013975.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.760.10	UniProtKB/TrEMBL
	Zn peptidases	UniProtKB/TrEMBL
InterPro	Cyt_c-like_dom_sf	UniProtKB/TrEMBL
	Cyt_c1	UniProtKB/TrEMBL
	Gaa1	UniProtKB/TrEMBL
NCBI Gene	GPAA1	ENTREZGENE
PANTHER	GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN	UniProtKB/TrEMBL
	PTHR13304	UniProtKB/TrEMBL
Pfam	Cytochrom_C1	UniProtKB/TrEMBL
	Gaa1	UniProtKB/TrEMBL
PIRSF	GAA1	UniProtKB/TrEMBL
PRINTS	CYTOCHROMEC1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46626	UniProtKB/TrEMBL
UniProt	A0A8C0PG67_CANLF	UniProtKB/TrEMBL
	A0A8C0PPI5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R3N4	ENTREZGENE
	A0A8C0SFV7_CANLF	UniProtKB/TrEMBL
	A0A8C0SGN2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SHI0_CANLF	UniProtKB/TrEMBL
	A0A8I3N387_CANLF	UniProtKB/TrEMBL
	A0A8I3N3K0_CANLF	UniProtKB/TrEMBL
	A0A8I3N754_CANLF	UniProtKB/TrEMBL
	A0A8I3RU32_CANLF	UniProtKB/TrEMBL
	A0A8P0S7G3	ENTREZGENE
	Q9XTA6_CANLF	UniProtKB/TrEMBL
UniProt Secondary	A0A8P0S7G3	UniProtKB/TrEMBL
VGNC ID	VGNC:41358	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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