ZNF175 (zinc finger protein 175) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: ZNF175 (zinc finger protein 175) Canis lupus familiaris
Analyze
Symbol: ZNF175
Name: zinc finger protein 175
RGD ID: 12207584
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Rat
Bonobo
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11105,502,656 - 105,522,206 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1105,504,293 - 105,519,911 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1105,077,271 - 105,095,186 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01106,013,880 - 106,031,791 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1106,012,005 - 106,029,202 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11105,685,871 - 105,703,796 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01105,327,179 - 105,345,108 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01106,122,004 - 106,139,929 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (ISO)
nucleolus  (ISO)

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF175
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11105,502,656 - 105,522,206 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1105,504,293 - 105,519,911 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1105,077,271 - 105,095,186 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01106,013,880 - 106,031,791 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1106,012,005 - 106,029,202 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11105,685,871 - 105,703,796 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01105,327,179 - 105,345,108 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01106,122,004 - 106,139,929 (-)NCBIUU_Cfam_GSD_1.0
ZNF175
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381951,571,283 - 51,592,510 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1951,571,283 - 51,592,510 (+)EnsemblGRCh38hg38GRCh38
GRCh371952,074,536 - 52,095,763 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361956,766,343 - 56,784,803 (+)NCBINCBI36Build 36hg18NCBI36
Build 341956,766,342 - 56,784,802NCBI
Celera1949,125,591 - 49,144,051 (+)NCBICelera
Cytogenetic Map19q13.41NCBI
HuRef1948,406,861 - 48,425,367 (+)NCBIHuRef
CHM1_11952,076,460 - 52,094,902 (+)NCBICHM1_1
T2T-CHM13v2.01954,659,955 - 54,681,159 (+)NCBIT2T-CHM13v2.0
Zfp719
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81103,146,519 - 103,159,466 (+)NCBIGRCr8
mRatBN7.2194,009,957 - 94,027,342 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl193,992,492 - 94,023,023 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0199,500,211 - 99,513,269 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl199,505,677 - 99,512,489 (+)EnsemblRnor6.0rn6Rnor6.0
RGSC_v3.4193,986,011 - 93,992,829 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera188,285,533 - 88,298,523 (+)NCBICelera
Cytogenetic Map1q22NCBI
ZNF175
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22057,615,288 - 57,634,195 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11959,539,778 - 59,558,470 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01948,516,303 - 48,534,799 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11957,398,056 - 57,416,654 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1957,400,149 - 57,416,487 (+)Ensemblpanpan1.1panPan2
Znf175
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093494,864,624 - 4,875,954 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493702630,049 - 37,338 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493702624,788 - 35,657 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF175
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl658,408,885 - 58,419,435 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1658,407,424 - 58,419,481 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2651,770,506 - 51,782,972 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF175
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1644,409,441 - 44,423,508 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl644,410,243 - 44,423,378 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607324,463,687 - 24,479,485 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in ZNF175
257 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003432646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014114932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000043848   ⟹   ENSCAFP00000037232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1105,504,293 - 105,519,911 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000069550   ⟹   ENSCAFP00000059157
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1105,506,949 - 105,519,818 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845008782   ⟹   ENSCAFP00845006922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1106,012,005 - 106,029,202 (-)Ensembl
RefSeq Acc Id: XM_003432646   ⟹   XP_003432694
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,502,656 - 105,522,204 (-)NCBI
Dog10K_Boxer_Tasha1105,077,271 - 105,095,177 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014114932   ⟹   XP_013970407
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,502,656 - 105,522,206 (-)NCBI
Dog10K_Boxer_Tasha1105,077,271 - 105,095,186 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427708   ⟹   XP_022283416
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,502,656 - 105,522,180 (-)NCBI
Dog10K_Boxer_Tasha1105,077,271 - 105,095,020 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427715   ⟹   XP_022283423
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,502,656 - 105,522,181 (-)NCBI
Dog10K_Boxer_Tasha1105,077,271 - 105,095,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427716   ⟹   XP_022283424
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,502,656 - 105,522,206 (-)NCBI
Dog10K_Boxer_Tasha1105,077,271 - 105,095,186 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427725   ⟹   XP_022283433
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,502,656 - 105,512,197 (-)NCBI
Dog10K_Boxer_Tasha1105,077,271 - 105,085,573 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038467223   ⟹   XP_038323151
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11105,685,871 - 105,703,796 (-)NCBI
RefSeq Acc Id: XM_038467224   ⟹   XP_038323152
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11105,685,871 - 105,703,787 (-)NCBI
RefSeq Acc Id: XM_038467225   ⟹   XP_038323153
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11105,685,871 - 105,703,690 (-)NCBI
RefSeq Acc Id: XM_038467226   ⟹   XP_038323154
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11105,685,871 - 105,703,630 (-)NCBI
RefSeq Acc Id: XM_038467227   ⟹   XP_038323155
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11105,685,871 - 105,703,796 (-)NCBI
RefSeq Acc Id: XM_038467228   ⟹   XP_038323156
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11105,685,871 - 105,694,174 (-)NCBI
RefSeq Acc Id: XM_038527930   ⟹   XP_038383858
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01106,122,004 - 106,139,929 (-)NCBI
RefSeq Acc Id: XM_038527931   ⟹   XP_038383859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01106,122,004 - 106,139,920 (-)NCBI
RefSeq Acc Id: XM_038527932   ⟹   XP_038383860
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01106,122,004 - 106,139,823 (-)NCBI
RefSeq Acc Id: XM_038527933   ⟹   XP_038383861
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01106,122,004 - 106,139,763 (-)NCBI
RefSeq Acc Id: XM_038527934   ⟹   XP_038383862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01106,122,004 - 106,139,929 (-)NCBI
RefSeq Acc Id: XM_038527935   ⟹   XP_038383863
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01106,122,004 - 106,130,307 (-)NCBI
RefSeq Acc Id: XM_038592282   ⟹   XP_038448210
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01105,327,179 - 105,345,099 (-)NCBI
RefSeq Acc Id: XM_038592283   ⟹   XP_038448211
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01105,327,179 - 105,345,108 (-)NCBI
RefSeq Acc Id: XM_038592284   ⟹   XP_038448212
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01105,327,179 - 105,345,002 (-)NCBI
RefSeq Acc Id: XM_038592285   ⟹   XP_038448213
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01105,327,179 - 105,344,942 (-)NCBI
RefSeq Acc Id: XM_038592286   ⟹   XP_038448214
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01105,327,179 - 105,345,099 (-)NCBI
RefSeq Acc Id: XM_038592287   ⟹   XP_038448215
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01105,327,179 - 105,335,477 (-)NCBI
RefSeq Acc Id: XM_038656013   ⟹   XP_038511941
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01106,013,880 - 106,031,791 (-)NCBI
RefSeq Acc Id: XM_038656014   ⟹   XP_038511942
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01106,013,880 - 106,031,782 (-)NCBI
RefSeq Acc Id: XM_038656015   ⟹   XP_038511943
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01106,013,880 - 106,031,685 (-)NCBI
RefSeq Acc Id: XM_038656016   ⟹   XP_038511944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01106,013,880 - 106,031,625 (-)NCBI
RefSeq Acc Id: XM_038656017   ⟹   XP_038511945
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01106,013,880 - 106,031,791 (-)NCBI
RefSeq Acc Id: XM_038656018   ⟹   XP_038511946
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01106,013,880 - 106,022,181 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003432694 (Get FASTA)   NCBI Sequence Viewer  
  XP_013970407 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283416 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283423 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283424 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283433 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323151 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323152 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323153 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323154 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323155 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323156 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383858 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383860 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383863 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448210 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448211 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448213 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448214 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448215 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511941 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511942 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511943 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511944 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511945 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511946 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000037232.3
  ENSCAFP00845006922
  ENSCAFP00845006922.1
RefSeq Acc Id: XP_013970407   ⟸   XM_014114932
- Peptide Label: isoform X1
- UniProtKB: J9NVP0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003432694   ⟸   XM_003432646
- Peptide Label: isoform X1
- UniProtKB: J9NVP0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022283424   ⟸   XM_022427716
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022283423   ⟸   XM_022427715
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022283416   ⟸   XM_022427708
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022283433   ⟸   XM_022427725
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSCAFP00000059157   ⟸   ENSCAFT00000069550
Ensembl Acc Id: ENSCAFP00000037232   ⟸   ENSCAFT00000043848
RefSeq Acc Id: XP_038323155   ⟸   XM_038467227
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323151   ⟸   XM_038467223
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038323152   ⟸   XM_038467224
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038323153   ⟸   XM_038467225
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038323154   ⟸   XM_038467226
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038323156   ⟸   XM_038467228
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038448211   ⟸   XM_038592283
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038448214   ⟸   XM_038592286
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448210   ⟸   XM_038592282
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038448212   ⟸   XM_038592284
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038448213   ⟸   XM_038592285
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038448215   ⟸   XM_038592287
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038511945   ⟸   XM_038656017
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038511941   ⟸   XM_038656013
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038511942   ⟸   XM_038656014
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038511943   ⟸   XM_038656015
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038511944   ⟸   XM_038656016
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038511946   ⟸   XM_038656018
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038383862   ⟸   XM_038527934
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038383858   ⟸   XM_038527930
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038383859   ⟸   XM_038527931
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038383860   ⟸   XM_038527932
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038383861   ⟸   XM_038527933
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038383863   ⟸   XM_038527935
- Peptide Label: isoform X3
Ensembl Acc Id: ENSCAFP00845006922   ⟸   ENSCAFT00845008782
Protein Domains
C2H2-type   KRAB

Promoters
RGD ID:13682170
Promoter ID:EPDNEW_C237
Type:multiple initiation site
Name:ZNF175_1
Description:zinc finger protein 175
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11105,522,171 - 105,522,231EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000029814 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845004911 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000043848.3 UniProtKB/TrEMBL
  ENSCAFT00845008782 ENTREZGENE
  ENSCAFT00845008782.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF175 ENTREZGENE
PANTHER IP01201P-RELATED UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A8I3MRR4_CANLF UniProtKB/TrEMBL
  A0A8P0NP74_CANLF UniProtKB/TrEMBL
  J9NVP0 ENTREZGENE
VGNC ID VGNC:48667 ENTREZGENE