TCTN3 (tectonic family member 3) - Rat Genome Database

Name: TCTN3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TCTN3 (tectonic family member 3) Canis lupus familiaris

Analyze

Symbol:

TCTN3

Name:

tectonic family member 3

RGD ID:

12184537

Description:

INVOLVED IN cell projection organization (inferred); cilium assembly (inferred); positive regulation of apoptotic process (inferred); ASSOCIATED WITH agammaglobulinemia 4 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tectonic-3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TCTN3 (tectonic family member 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Tctn3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tctn3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tctn3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TCTN3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tctn3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TCTN3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TCTN3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tctn3 (tectonic family member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	9,155,758 - 9,181,721 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	9,156,797 - 9,181,731 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	9,330,959 - 9,357,567 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	9,417,327 - 9,443,946 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	9,417,888 - 9,444,387 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	9,133,791 - 9,160,393 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	9,192,795 - 9,219,907 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	9,336,550 - 9,363,162 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

agammaglobulinemia 4 (ISO)

Developmental Disabilities (ISO)

genetic disease (ISO)

Joubert syndrome (ISO)

Joubert Syndrome 18 (ISO)

long QT syndrome (ISO)

orofaciodigital syndrome IV (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell projection organization (IEA)

cilium assembly (IEA)

positive regulation of apoptotic process (IEA)

smoothened signaling pathway (IEA)

Cellular Component

nucleus (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TCTN3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	9,155,758 - 9,181,721 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	9,156,797 - 9,181,731 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	9,330,959 - 9,357,567 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	9,417,327 - 9,443,946 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	9,417,888 - 9,444,387 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	9,133,791 - 9,160,393 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	9,192,795 - 9,219,907 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	9,336,550 - 9,363,162 (-)	NCBI		UU_Cfam_GSD_1.0

TCTN3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	95,663,401 - 95,693,927 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	95,659,823 - 95,694,143 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	97,423,158 - 97,453,684 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	97,413,163 - 97,443,890 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	97,413,162 - 97,443,701	NCBI
Celera	10	91,164,350 - 91,195,122 (-)	NCBI		Celera
Cytogenetic Map	10	q24.1	NCBI
HuRef	10	91,050,833 - 91,081,585 (-)	NCBI		HuRef
CHM1_1	10	97,705,000 - 97,735,751 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	96,542,501 - 96,573,034 (-)	NCBI		T2T-CHM13v2.0

Tctn3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	40,584,890 - 40,600,768 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	40,584,890 - 40,600,677 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	40,596,446 - 40,612,324 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	40,596,446 - 40,612,233 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	40,670,936 - 40,686,705 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	40,649,757 - 40,665,526 (-)	NCBI		MGSCv36	mm8
Celera	19	41,398,356 - 41,414,120 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	34.25	NCBI

Tctn3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	249,363,428 - 249,374,698 (-)	NCBI		GRCr8
mRatBN7.2	1	239,414,003 - 239,425,273 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	239,415,203 - 239,425,272 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	247,549,857 - 247,561,127 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	254,253,534 - 254,264,813 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	246,906,571 - 246,917,850 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	259,681,435 - 259,691,881 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	259,097,455 - 259,106,948 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	1	259,682,249 - 259,691,742 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	267,124,918 - 267,135,070 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	245,725,786 - 245,735,594 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	235,260,289 - 235,270,735 (-)	NCBI		Celera
Cytogenetic Map	1	q54	NCBI

Tctn3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955507	1,973,500 - 1,994,609 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955507	1,972,645 - 1,993,967 (-)	NCBI	ChiLan1.0	ChiLan1.0

TCTN3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	107,566,996 - 107,597,074 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	107,572,295 - 107,602,393 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	92,274,003 - 92,304,093 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	95,780,315 - 95,810,271 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	95,780,315 - 95,810,271 (-)	Ensembl	panpan1.1		panPan2

Tctn3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	37,683,854 - 37,711,365 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936636	3,722,950 - 3,751,557 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936636	3,722,985 - 3,750,440 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TCTN3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	107,230,934 - 107,263,344 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	107,230,820 - 107,263,364 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	116,865,469 - 116,897,218 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TCTN3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	88,829,750 - 88,859,580 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	88,829,749 - 88,859,547 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	49,697,411 - 49,727,748 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tctn3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	6,984,234 - 7,012,142 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	6,980,716 - 7,011,681 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TCTN3
370 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium
Low	5	5	22	6	6	6	6		12	8	10	6
Below cutoff								6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022412017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022412018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038440092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038440094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038440095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038514700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038514701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038514702	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038642506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038642507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038642508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_845574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000013361 ⟹ ENSCAFP00000012364

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	28	9,156,797 - 9,181,731 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000069679 ⟹ ENSCAFP00000043367

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	28	9,156,797 - 9,181,731 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845044626 ⟹ ENSCAFP00845034964

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	28	9,417,888 - 9,444,387 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845044766 ⟹ ENSCAFP00845035080

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	28	9,417,888 - 9,443,955 (-)	Ensembl

RefSeq Acc Id:

XM_022412017 ⟹ XP_022267725

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	9,161,158 - 9,181,721 (-)	NCBI
Dog10K_Boxer_Tasha	28	9,336,991 - 9,357,567 (-)	NCBI

Sequence:

show sequence

ATGACGTCACACGAGATGCGCCTCCTCCCCTCCACCCTCTAGCCGAGCGCCTGGCGACCGCCGC
GGCCCACTTTAAACTCGTGGGGGTCTCGACTGCCCCTTGTGCAGTTCGCCCCATGTGTACTTCG
CAGCTGGAGCTGCTGCAGGTGTTCTTCCTGATGCTCCCCGGGGGCGTCTGGCCTCAGCCCGCTT
CCTCTCCTTCAGCGCCTGTGCCCACCCCTTCGGACGCGGGGCCGGGGTCGCCGGGCGGGACCCT
TCAGTCCTCCTCGGAGGGGTCTGAAACTCCGTGGCCTGTACCTGGGATCTCTACGTTGGGCCCT
ACGGCCGTGACCCTCTCTGCACCTGGGAATGGGACCGTACACCTGTTGCCAGCCTTACCTGTCT
GTGTCTGTGACTTGACTCCTGGTACCTGCGACATAAATTGCTGCTGCGACAAGGACTGCTATCT
TCTGCACCCGAGAACGGTTTTTTCCTTCTGCCTTCCAGGCAGCGTGAGGTCTTCAAGTTGGATG
TGTGTGGACAACTCTCTTATCTTCAGGAGTAATTCCCCATTTCCTTCAAGGGTTTTCATGGATT
CAAGTGGAATTAAGCAGTTTTGTGTCCTTGCGAACAACTCAAAATTAAACTATTTCCAGAAGCT
CCAGAAGGTCAACGCAACCCACTTCGAGGCCCTGGCTACAGAGTTTGGAGGGGGATCGTTCACT
TCAACAATCCAAACCCAGTCCCCACCACCTCATTACAGGGCTGGGGACCCCATTTTGACTTACT
TCCCCGAGTGGTCTGTAATCAGCTTGCTGAGGCAGCCTGCAGGAGTTGGAGCTGGGGGGTTCTG
TGCTGAGAGCAATCCTGCTGGTTTCCTGGAGAGTAAAAGTACCACGTGTGCTCGCTTCTTCAAG
AATCTGACAAGTAGCTGCACCTCAGATCCAGCTCTCAATGCTGCCTCTTACTATAACTTCACAG
TCTTGAAGGTTCCAAGAGGTATGACTGATCTGCAGAATATGAAGTTCCAGGTTCCTGTAACCCT
TGTCTCACAAGCTGGTTCTCCTCTCTTGTCTGGAAACACTTGTCAGAATGTGGTTTCCCAGGTC
ATCTATGAGATAGAAACCAATGGGACTTTGGGAATCCAGAAAGTCTCTGTCAGTTTTGGACAAA
CCAACCTGACTATCAAGCCAGGCACTTCCTTACAGCAACACTTTCTCATTCGCTTCAGGGCTTT
TCAACAGAACAAAGCTGCTTCTCTTACTAGTCTTAGAAGTGGGAATCCTGGCTATATTGTTGGG
AAGCCACTTTTGGCCCTAACTGGTGATATAAGTCACTCTATCACCCTCATGAAAAGTAAGGGTG
ATGGAATTTGCTCTGTTAAGAGACATGAAGTACAATTTGGAGTGAATGCAATATCTGGATGCAA
GTTCAGGTTGAAAAAGATGGACTGCAGCCACTTACAGCAGGAGATTTATGAGACTCTTCATGGA
AAGACCAGCCCAGAACATGTTGCCATCTTTGGTAATGCTGACCCAGCCCAAAAGAGAGAGTGGA
TGCGGATTCTCAGCAGGAACTGCAGTGTTTCAGCTATGCATTGTACTTCCTGCTGTGTCATACC
AGTTTCCCTGGAGATCCAGGTATTGTGGGCGTATATAGGCCTCCAGTCCAACCCACAAGCTCAT
GTGTCAGGAACCCGATTCCTATACCGGTGCCAATCCATAAAGAAAACTGCTTTCACCCTGCTTG
AACCCACTTTGCCTGTAAAGTGCCTGGAAATATACATCTCCCAAATGGCCCTTAACCAATGCCT
GAAAGATGCAGGCATAGAAAAACTCAGCCCCCTTGCTTTGGATTGGGATAATACAACTTGTTGG
GACTGTGAAACCTACTTTATATTTCCGAGTTCCCCTGCAGATTGGACTAATGCTAGATAATGCT
ATAATTTATCAAATTAATTAATAGTTGTATAATTTATCAAAATAATATATATATATATGTTTTT
AAGGTAAGGAAATGCCAGAAAAGAGGATCTCTTAACAAAAAAATAAAATGCTATATTCCCTCTT
GCCTTGCTTCTAAGCAATATTGAATGATTATCTCTTGAATTATGAGTTGTAGGTAATTTATGGA
CTTCTATTTTGGTGAGTTTAGCTCTTTTTTTTCCTCCTCCCACTACACTCCCAATGTATGTTAA
GTAA

hide sequence

RefSeq Acc Id:

XM_022412018 ⟹ XP_022267726

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	9,155,758 - 9,181,720 (-)	NCBI
Dog10K_Boxer_Tasha	28	9,330,959 - 9,357,567 (-)	NCBI

Sequence:

show sequence

TGACGTCACACGAGATGCGCCTCCTCCCCTCCACCCTCTAGCCGAGCGCCTGGCGACCGCCGCG
GCCCACTTTAAACTCGTGGGGGTCTCGACTGCCCCTTGTGCAGTTCGCCCCATGTGTACTTCGC
AGCTGGAGCTGCTGCAGGTGTTCTTCCTGATGCTCCCCGGGGGCGTCTGGCCTCAGCCCGCTTC
CTCTCCTTCAGCGCCTGTGCCCACCCCTTCGGACGCGGGGCCGGGGTCGCCGGGCGGGACCCTT
CAGTCCTCCTCGGAGGGGTCTGAAACTCCGTGGCCTGTACCTGGGATCTCTACGTTGGGCCCTA
CGGCCGTGACCCTCTCTGCACCTGGGAATGGGACCGTACACCTGTTGCCAGCCTTACCTGTCTG
TGTCTGTGACTTGACTCCTGGTACCTGCGACATAAATTGCTGCTGCGACAAGGACTGCTATCTT
CTGCACCCGAGAACGGTTTTTTCCTTCTGCCTTCCAGGCAGCGTGAGGTCTTCAAGTTGGATGT
GTGTGGACAACTCTCTTATCTTCAGGAGTAATTCCCCATTTCCTTCAAGGGTTTTCATGGATTC
AAGTGGAATTAAGCAGTTTTGTGTCCTTGCGAACAACTCAAAATTAAACTATTTCCAGAAGCTC
CAGAAGGTCAACGCAACCCACTTCGAGGCCCTGGCTACAGAGTTTGGAGGGGGATCGTTCACTT
CAACAATCCAAACCCAGTCCCCACCACCTCATTACAGGGCTGGGGACCCCATTTTGACTTACTT
CCCCGAGTGGTCTGTAATCAGCTTGCTGAGGCAGCCTGCAGGAGTTGGAGCTGGGGGGTTCTGT
GCTGAGAGCAATCCTGCTGGTTTCCTGGAGAGTAAAAGTACCACGTGTGCTCGCTTCTTCAAGA
ATCTGACAAGTAGCTGCACCTCAGATCCAGCTCTCAATGCTGCCTCTTACTATAACTTCACAGT
CTTGAAGGTTCCAAGAGGTATGACTGATCTGCAGAATATGAAGGTCATCTATGAGATAGAAACC
AATGGGACTTTGGGAATCCAGAAAGTCTCTGTCAGTTTTGGACAAACCAACCTGACTATCAAGC
CAGGCACTTCCTTACAGCAACACTTTCTCATTCGCTTCAGGGCTTTTCAACAGAACAAAGCTGC
TTCTCTTACTAGTCTTAGAAGTGGGAATCCTGGCTATATTGTTGGGAAGCCACTTTTGGCCCTA
ACTGGTGATATAAGTCACTCTATCACCCTCATGAAAAGTAAGGGTGATGGAATTTGCTCTGTTA
AGAGACATGAAGTACAATTTGGAGTGAATGCAATATCTGGATGCAAGTTCAGGTTGAAAAAGAT
GGACTGCAGCCACTTACAGCAGGAGATTTATGAGACTCTTCATGGAAAGACCAGCCCAGAACAT
GTTGCCATCTTTGGTAATGCTGACCCAGCCCAAAAGAGAGAGTGGATGCGGATTCTCAGCAGGA
ACTGCAGTGTTTCAGCTATGCATTGTACTTCCTGCTGTGTCATACCAGTTTCCCTGGAGATCCA
GGTATTGTGGGCGTATATAGGCCTCCAGTCCAACCCACAAGCTCATGTGTCAGGAACCCGATTC
CTATACCGGTGCCAATCCATAAAGGATTACCAACAAGTAACAGAAGTACCTTTGACAACTGTTG
TGACCTTTGTGGACATTACCCAGAAGCCAGAGCCTCCAAGGGGCCAACCTAGAATAGACTGGAA
ACTGCCATTCGACTTCTTTTTCCCCTTCAAAGTGGCATTCAGCAGAGGAGTAGACTCTCAAAAA
GGCTCAGCCTCTCCCGTCCTTATCCTGTGTCTCTTAGTGCTTGGAGTTCTCAAGCTAGATACCA
TGTGAAACAAGGAGAGTCAGTTTTTTAATTTTCCCTATGGGAAGTTCTAAGACAGCCTGCTTAT
CTTGGCTAAATGGGTCCGTACCTGCTTGTGACCAGAGGACAACATTTAAAATAACAGAGGACCT
AACTGAAGGAATGTTTGTATATGAAAGAAGAGATTTTTGAAAAGCAATAAAAACATCATCTTTG
TTAGGGCTCTCTGCTTAGGACTCTGCAGACCACCAAGTACACATTAGGTTCTCTACTTATCAAG
CTAGGAAGAACCTAAAGAGCCCTTCCTCCAGCCCTTCAGGTTTTGTTATGCCTGACTAAAGTTT
TGCAAAATCTTCATCCATCTGCTCATAGGCACACTTAGGCCCAGCATAAAAAGGAACATGCTCC
CGCTATCCCCCAGATGAATTTGGGAATAGATGCCCTCTGGACTTAAGAGTAACTGTTAGGAACA
GAAAACTGCTGGCTATAGATTCCATCTGGCCCCTCCCTACTCCCTTGGGCCACACTCTTTGCCT
GGGCAGGAGTAAGGAAAACAGTTCTTTCAGGTCAGTTTCCAAAATGATTGAGGAATCCCAGCCT
CCTTTTTTTGCTAGCAAATGATTGATCCTACTACCCATTTCTATATTTTTCCTTCCTTCCATTG
TGGTGAGTAGAAATGAAACTGAGAGCTTTGTTGTGCTAATTCCAGCAGCACACAGAAGCTGACA
TGTGATCACCTCATGATTACTTATCTATGTGCATGAGGTTTAAAAAGAAGGAAAAAATGTCCAT
ACATAGCACAATGGCATTCAGATCAAAGTCCTTAAGCTCTTTCCCTGGGATTAGAGCTAAATAT
AGCAGGATAGGTGAGATTGGGAAGGAGACTGGGAGGGTGGAGGTGATGCCAGGAGCCAGAGGGT
TGGGAGCCTAAAGTGACTATAGTAGAAACACTGAATGGGCAAAATAGACTCTAAGATGGGGTCA
ATAACATGGGAGCTCATCATATAGGGACTTGAAAGCCAGGCAGAGAGAACTGAAAATAGTCTAC
TTTTTTTTTTTTTTTTTTTT

hide sequence

RefSeq Acc Id:

XM_038440092 ⟹ XP_038296020

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	9,417,328 - 9,443,946 (-)	NCBI

RefSeq Acc Id:

XM_038440094 ⟹ XP_038296022

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	9,423,359 - 9,443,946 (-)	NCBI

RefSeq Acc Id:

XM_038440095 ⟹ XP_038296023

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	9,417,327 - 9,443,946 (-)	NCBI

RefSeq Acc Id:

XM_038514700 ⟹ XP_038370628

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	9,133,792 - 9,160,393 (-)	NCBI

RefSeq Acc Id:

XM_038514701 ⟹ XP_038370629

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	9,139,822 - 9,160,393 (-)	NCBI

RefSeq Acc Id:

XM_038514702 ⟹ XP_038370630

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	9,133,791 - 9,160,393 (-)	NCBI

RefSeq Acc Id:

XM_038578340 ⟹ XP_038434268

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	9,336,551 - 9,363,162 (-)	NCBI

RefSeq Acc Id:

XM_038578341 ⟹ XP_038434269

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	9,342,585 - 9,363,162 (-)	NCBI

RefSeq Acc Id:

XM_038578342 ⟹ XP_038434270

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	9,336,550 - 9,363,162 (-)	NCBI

RefSeq Acc Id:

XM_038642506 ⟹ XP_038498434

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	9,192,796 - 9,219,907 (-)	NCBI

RefSeq Acc Id:

XM_038642507 ⟹ XP_038498435

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	9,198,581 - 9,219,907 (-)	NCBI

RefSeq Acc Id:

XM_038642508 ⟹ XP_038498436

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	9,192,795 - 9,219,907 (-)	NCBI

RefSeq Acc Id:

XM_845574 ⟹ XP_850667

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	9,155,758 - 9,181,720 (-)	NCBI
Dog10K_Boxer_Tasha	28	9,330,960 - 9,357,567 (-)	NCBI

Sequence:

show sequence

TGACGTCACACGAGATGCGCCTCCTCCCCTCCACCCTCTAGCCGAGCGCCTGGCGACCGCCGCG
GCCCACTTTAAACTCGTGGGGGTCTCGACTGCCCCTTGTGCAGTTCGCCCCATGTGTACTTCGC
AGCTGGAGCTGCTGCAGGTGTTCTTCCTGATGCTCCCCGGGGGCGTCTGGCCTCAGCCCGCTTC
CTCTCCTTCAGCGCCTGTGCCCACCCCTTCGGACGCGGGGCCGGGGTCGCCGGGCGGGACCCTT
CAGTCCTCCTCGGAGGGGTCTGAAACTCCGTGGCCTGTACCTGGGATCTCTACGTTGGGCCCTA
CGGCCGTGACCCTCTCTGCACCTGGGAATGGGACCGTACACCTGTTGCCAGCCTTACCTGTCTG
TGTCTGTGACTTGACTCCTGGTACCTGCGACATAAATTGCTGCTGCGACAAGGACTGCTATCTT
CTGCACCCGAGAACGGTTTTTTCCTTCTGCCTTCCAGGCAGCGTGAGGTCTTCAAGTTGGATGT
GTGTGGACAACTCTCTTATCTTCAGGAGTAATTCCCCATTTCCTTCAAGGGTTTTCATGGATTC
AAGTGGAATTAAGCAGTTTTGTGTCCTTGCGAACAACTCAAAATTAAACTATTTCCAGAAGCTC
CAGAAGGTCAACGCAACCCACTTCGAGGCCCTGGCTACAGAGTTTGGAGGGGGATCGTTCACTT
CAACAATCCAAACCCAGTCCCCACCACCTCATTACAGGGCTGGGGACCCCATTTTGACTTACTT
CCCCGAGTGGTCTGTAATCAGCTTGCTGAGGCAGCCTGCAGGAGTTGGAGCTGGGGGGTTCTGT
GCTGAGAGCAATCCTGCTGGTTTCCTGGAGAGTAAAAGTACCACGTGTGCTCGCTTCTTCAAGA
ATCTGACAAGTAGCTGCACCTCAGATCCAGCTCTCAATGCTGCCTCTTACTATAACTTCACAGT
CTTGAAGGTTCCAAGAGGTATGACTGATCTGCAGAATATGAAGTTCCAGGTTCCTGTAACCCTT
GTCTCACAAGCTGGTTCTCCTCTCTTGTCTGGAAACACTTGTCAGAATGTGGTTTCCCAGGTCA
TCTATGAGATAGAAACCAATGGGACTTTGGGAATCCAGAAAGTCTCTGTCAGTTTTGGACAAAC
CAACCTGACTATCAAGCCAGGCACTTCCTTACAGCAACACTTTCTCATTCGCTTCAGGGCTTTT
CAACAGAACAAAGCTGCTTCTCTTACTAGTCTTAGAAGTGGGAATCCTGGCTATATTGTTGGGA
AGCCACTTTTGGCCCTAACTGGTGATATAAGTCACTCTATCACCCTCATGAAAAGTAAGGGTGA
TGGAATTTGCTCTGTTAAGAGACATGAAGTACAATTTGGAGTGAATGCAATATCTGGATGCAAG
TTCAGGTTGAAAAAGATGGACTGCAGCCACTTACAGCAGGAGATTTATGAGACTCTTCATGGAA
AGACCAGCCCAGAACATGTTGCCATCTTTGGTAATGCTGACCCAGCCCAAAAGAGAGAGTGGAT
GCGGATTCTCAGCAGGAACTGCAGTGTTTCAGCTATGCATTGTACTTCCTGCTGTGTCATACCA
GTTTCCCTGGAGATCCAGGTATTGTGGGCGTATATAGGCCTCCAGTCCAACCCACAAGCTCATG
TGTCAGGAACCCGATTCCTATACCGGTGCCAATCCATAAAGGATTACCAACAAGTAACAGAAGT
ACCTTTGACAACTGTTGTGACCTTTGTGGACATTACCCAGAAGCCAGAGCCTCCAAGGGGCCAA
CCTAGAATAGACTGGAAACTGCCATTCGACTTCTTTTTCCCCTTCAAAGTGGCATTCAGCAGAG
GAGTAGACTCTCAAAAAGGCTCAGCCTCTCCCGTCCTTATCCTGTGTCTCTTAGTGCTTGGAGT
TCTCAAGCTAGATACCATGTGAAACAAGGAGAGTCAGTTTTTTAATTTTCCCTATGGGAAGTTC
TAAGACAGCCTGCTTATCTTGGCTAAATGGGTCCGTACCTGCTTGTGACCAGAGGACAACATTT
AAAATAACAGAGGACCTAACTGAAGGAATGTTTGTATATGAAAGAAGAGATTTTTGAAAAGCAA
TAAAAACATCATCTTTGTTAGGGCTCTCTGCTTAGGACTCTGCAGACCACCAAGTACACATTAG
GTTCTCTACTTATCAAGCTAGGAAGAACCTAAAGAGCCCTTCCTCCAGCCCTTCAGGTTTTGTT
ATGCCTGACTAAAGTTTTGCAAAATCTTCATCCATCTGCTCATAGGCACACTTAGGCCCAGCAT
AAAAAGGAACATGCTCCCGCTATCCCCCAGATGAATTTGGGAATAGATGCCCTCTGGACTTAAG
AGTAACTGTTAGGAACAGAAAACTGCTGGCTATAGATTCCATCTGGCCCCTCCCTACTCCCTTG
GGCCACACTCTTTGCCTGGGCAGGAGTAAGGAAAACAGTTCTTTCAGGTCAGTTTCCAAAATGA
TTGAGGAATCCCAGCCTCCTTTTTTTGCTAGCAAATGATTGATCCTACTACCCATTTCTATATT
TTTCCTTCCTTCCATTGTGGTGAGTAGAAATGAAACTGAGAGCTTTGTTGTGCTAATTCCAGCA
GCACACAGAAGCTGACATGTGATCACCTCATGATTACTTATCTATGTGCATGAGGTTTAAAAAG
AAGGAAAAAATGTCCATACATAGCACAATGGCATTCAGATCAAAGTCCTTAAGCTCTTTCCCTG
GGATTAGAGCTAAATATAGCAGGATAGGTGAGATTGGGAAGGAGACTGGGAGGGTGGAGGTGAT
GCCAGGAGCCAGAGGGTTGGGAGCCTAAAGTGACTATAGTAGAAACACTGAATGGGCAAAATAG
ACTCTAAGATGGGGTCAATAACATGGGAGCTCATCATATAGGGACTTGAAAGCCAGGCAGAGAG
AACTGAAAATAGTCTACTTTTTTTTTTTTTTTTTTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_022267725	(Get FASTA)	NCBI Sequence Viewer
	XP_022267726	(Get FASTA)	NCBI Sequence Viewer
	XP_038296020	(Get FASTA)	NCBI Sequence Viewer
	XP_038296022	(Get FASTA)	NCBI Sequence Viewer
	XP_038296023	(Get FASTA)	NCBI Sequence Viewer
	XP_038370628	(Get FASTA)	NCBI Sequence Viewer
	XP_038370629	(Get FASTA)	NCBI Sequence Viewer
	XP_038370630	(Get FASTA)	NCBI Sequence Viewer
	XP_038434268	(Get FASTA)	NCBI Sequence Viewer
	XP_038434269	(Get FASTA)	NCBI Sequence Viewer
	XP_038434270	(Get FASTA)	NCBI Sequence Viewer
	XP_038498434	(Get FASTA)	NCBI Sequence Viewer
	XP_038498435	(Get FASTA)	NCBI Sequence Viewer
	XP_038498436	(Get FASTA)	NCBI Sequence Viewer
	XP_850667	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000012364.4
	ENSCAFP00000043367.1
	ENSCAFP00000071567.1
	ENSCAFP00040038513.1
	ENSCAFP00040038545.1
	ENSCAFP00845034964
	ENSCAFP00845034964.1
	ENSCAFP00845035080.1

RefSeq Acc Id:	XP_850667 ⟸ XM_845574
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JWW0 (UniProtKB/TrEMBL), A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCTSQLELLQVFFLMLPGGVWPQPASSPSAPVPTPSDAGPGSPGGTLQSSSEGSETPWPVPGIS TLGPTAVTLSAPGNGTVHLLPALPVCVCDLTPGTCDINCCCDKDCYLLHPRTVFSFCLPGSVRS SSWMCVDNSLIFRSNSPFPSRVFMDSSGIKQFCVLANNSKLNYFQKLQKVNATHFEALATEFGG GSFTSTIQTQSPPPHYRAGDPILTYFPEWSVISLLRQPAGVGAGGFCAESNPAGFLESKSTTCA RFFKNLTSSCTSDPALNAASYYNFTVLKVPRGMTDLQNMKFQVPVTLVSQAGSPLLSGNTCQNV VSQVIYEIETNGTLGIQKVSVSFGQTNLTIKPGTSLQQHFLIRFRAFQQNKAASLTSLRSGNPG YIVGKPLLALTGDISHSITLMKSKGDGICSVKRHEVQFGVNAISGCKFRLKKMDCSHLQQEIYE TLHGKTSPEHVAIFGNADPAQKREWMRILSRNCSVSAMHCTSCCVIPVSLEIQVLWAYIGLQSN PQAHVSGTRFLYRCQSIKDYQQVTEVPLTTVVTFVDITQKPEPPRGQPRIDWKLPFDFFFPFKV AFSRGVDSQKGSASPVLILCLLVLGVLKLDTM hide sequence

RefSeq Acc Id:	XP_022267726 ⟸ XM_022412018
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCTSQLELLQVFFLMLPGGVWPQPASSPSAPVPTPSDAGPGSPGGTLQSSSEGSETPWPVPGIS TLGPTAVTLSAPGNGTVHLLPALPVCVCDLTPGTCDINCCCDKDCYLLHPRTVFSFCLPGSVRS SSWMCVDNSLIFRSNSPFPSRVFMDSSGIKQFCVLANNSKLNYFQKLQKVNATHFEALATEFGG GSFTSTIQTQSPPPHYRAGDPILTYFPEWSVISLLRQPAGVGAGGFCAESNPAGFLESKSTTCA RFFKNLTSSCTSDPALNAASYYNFTVLKVPRGMTDLQNMKVIYEIETNGTLGIQKVSVSFGQTN LTIKPGTSLQQHFLIRFRAFQQNKAASLTSLRSGNPGYIVGKPLLALTGDISHSITLMKSKGDG ICSVKRHEVQFGVNAISGCKFRLKKMDCSHLQQEIYETLHGKTSPEHVAIFGNADPAQKREWMR ILSRNCSVSAMHCTSCCVIPVSLEIQVLWAYIGLQSNPQAHVSGTRFLYRCQSIKDYQQVTEVP LTTVVTFVDITQKPEPPRGQPRIDWKLPFDFFFPFKVAFSRGVDSQKGSASPVLILCLLVLGVL KLDTM hide sequence

RefSeq Acc Id:	XP_022267725 ⟸ XM_022412017
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCTSQLELLQVFFLMLPGGVWPQPASSPSAPVPTPSDAGPGSPGGTLQSSSEGSETPWPVPGIS TLGPTAVTLSAPGNGTVHLLPALPVCVCDLTPGTCDINCCCDKDCYLLHPRTVFSFCLPGSVRS SSWMCVDNSLIFRSNSPFPSRVFMDSSGIKQFCVLANNSKLNYFQKLQKVNATHFEALATEFGG GSFTSTIQTQSPPPHYRAGDPILTYFPEWSVISLLRQPAGVGAGGFCAESNPAGFLESKSTTCA RFFKNLTSSCTSDPALNAASYYNFTVLKVPRGMTDLQNMKFQVPVTLVSQAGSPLLSGNTCQNV VSQVIYEIETNGTLGIQKVSVSFGQTNLTIKPGTSLQQHFLIRFRAFQQNKAASLTSLRSGNPG YIVGKPLLALTGDISHSITLMKSKGDGICSVKRHEVQFGVNAISGCKFRLKKMDCSHLQQEIYE TLHGKTSPEHVAIFGNADPAQKREWMRILSRNCSVSAMHCTSCCVIPVSLEIQVLWAYIGLQSN PQAHVSGTRFLYRCQSIKKTAFTLLEPTLPVKCLEIYISQMALNQCLKDAGIEKLSPLALDWDN TTCWDCETYFIFPSSPADWTNAR hide sequence

RefSeq Acc Id:

ENSCAFP00000043367 ⟸ ENSCAFT00000069679

RefSeq Acc Id:

ENSCAFP00000012364 ⟸ ENSCAFT00000013361

RefSeq Acc Id:	XP_038370630 ⟸ XM_038514702
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038370628 ⟸ XM_038514700
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038370629 ⟸ XM_038514701
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038498436 ⟸ XM_038642508
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038498434 ⟸ XM_038642506
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038498435 ⟸ XM_038642507
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038296023 ⟸ XM_038440095
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038296020 ⟸ XM_038440092
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JWW0 (UniProtKB/TrEMBL), A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038296022 ⟸ XM_038440094
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038434270 ⟸ XM_038578342
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038434268 ⟸ XM_038578340
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JWW0 (UniProtKB/TrEMBL), A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038434269 ⟸ XM_038578341
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TRB8 (UniProtKB/TrEMBL), A0A8I3PPE6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845035080 ⟸ ENSCAFT00845044766

RefSeq Acc Id:

ENSCAFP00845034964 ⟸ ENSCAFT00845044626

Protein Domains

Tectonic

Promoters

RGD ID:

13688274

Promoter ID:

EPDNEW_C6342

Type:

initiation region

Name:

TCTN3_1

Description:

tectonic family member 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	9,181,688 - 9,181,748	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000008406	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040023697	UniProtKB/TrEMBL
	ENSCAFG00845025277	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000013361.5	UniProtKB/TrEMBL
	ENSCAFT00000069679.2	UniProtKB/TrEMBL
	ENSCAFT00000099500.1	UniProtKB/TrEMBL
	ENSCAFT00040044119.1	UniProtKB/TrEMBL
	ENSCAFT00040044152.1	UniProtKB/TrEMBL
	ENSCAFT00845044626	ENTREZGENE
	ENSCAFT00845044626.1	UniProtKB/TrEMBL
	ENSCAFT00845044766.1	UniProtKB/TrEMBL
InterPro	Tectonic	UniProtKB/TrEMBL
	Tectonic_dom	UniProtKB/TrEMBL
NCBI Gene	TCTN3	ENTREZGENE
PANTHER	PTHR14611	UniProtKB/TrEMBL
	TECTONIC-3	UniProtKB/TrEMBL
Pfam	DUF1619	UniProtKB/TrEMBL
UniProt	A0A8C0JWW0	ENTREZGENE
	A0A8C0TMV4_CANLF	UniProtKB/TrEMBL
	A0A8C0TRB8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PPE6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PXV1_CANLF	UniProtKB/TrEMBL
	A0A8P0PLN8_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:47215	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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