FAM98C (family with sequence similarity 98 member C) - Rat Genome Database

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Gene: FAM98C (family with sequence similarity 98 member C) Canis lupus familiaris
Analyze
Symbol: FAM98C (Ensembl: RYR1)
Name: family with sequence similarity 98 member C (Ensembl:ryanodine receptor 1)
RGD ID: 12181313
Description: ENCODES a protein that exhibits ATP binding (inferred); calcium channel activity (inferred); calcium-induced calcium release activity (inferred); INVOLVED IN calcium ion transmembrane transport (inferred); calcium ion transport (inferred); calcium-mediated signaling (inferred); ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); autism spectrum disorder (ortholog); FOUND IN cell cortex (inferred); cytoplasm (inferred); I band (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11114,598,841 - 114,602,316 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1114,597,464 - 114,602,708 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1115,063,305 - 115,204,391 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FAM98CDogasphyxiating thoracic dystrophy 3  ISOFAM98C (Homo sapiens)8554872ClinVar Annotator: match by term: Asphyxiating thoracic dystrophy 3ClinVar 
FAM98CDogautism spectrum disorder  ISOFAM98C (Homo sapiens)8554872ClinVar Annotator: match by term: Autism spectrum disorderClinVar 


Biological Process
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FAM98CDogcalcium ion transmembrane transport involved_inIEAInterPro:IPR000699150520179 InterProGO_REF:0000002
FAM98CDogcalcium ion transmembrane transport involved_inIEAUniProtKB-KW:KW-0107150520179 UniProtGO_REF:0000043
FAM98CDogcalcium ion transport involved_inIEAUniProtKB-KW:KW-0109150520179 UniProtGO_REF:0000043
FAM98CDogcalcium ion transport involved_inIEAInterPro:IPR013333 and InterPro:IPR015925150520179 InterProGO_REF:0000002
FAM98CDogcalcium-mediated signaling involved_inIEAGO:0005219150520179 GOCGO_REF:0000108
FAM98CDogcellular response to caffeine involved_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogintracellular calcium ion homeostasis involved_inIEAInterPro:IPR009460150520179 InterProGO_REF:0000002
FAM98CDogmonoatomic ion transmembrane transport involved_inIEAUniProtKB-KW:KW-0407150520179 UniProtGO_REF:0000043
FAM98CDogmonoatomic ion transport involved_inIEAInterPro:IPR005821150520179 InterProGO_REF:0000002
FAM98CDogmonoatomic ion transport involved_inIEAUniProtKB-KW:KW-0406150520179 UniProtGO_REF:0000043
FAM98CDogrelease of sequestered calcium ion into cytosol involved_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogrelease of sequestered calcium ion into cytosol by sarcoplasmic reticulum involved_inIBAMGI:99659 more ...150520179 GO_CentralGO_REF:0000033
FAM98CDogresponse to hypoxia involved_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogtransmembrane transport involved_inIEAInterPro:IPR005821150520179 InterProGO_REF:0000002
1 to 14 of 14 rows

Cellular Component
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FAM98CDogcalcium channel complex part_ofIBAMGI:99685 more ...150520179 GO_CentralGO_REF:0000033
FAM98CDogcell cortex located_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogcytoplasm located_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogI band located_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogmembrane located_inIEAInterPro:IPR000699 more ...150520179 InterProGO_REF:0000002
FAM98CDogmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
FAM98CDogplasma membrane located_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogsarcolemma is_active_inIBAMGI:99659 more ...150520179 GO_CentralGO_REF:0000033
FAM98CDogsarcoplasmic reticulum located_inIEAUniProtKB-KW:KW-0703150520179 UniProtGO_REF:0000043
FAM98CDogsarcoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-0241150520179 UniProtGO_REF:0000044
FAM98CDogsarcoplasmic reticulum membrane is_active_inIBAMGI:99659 more ...150520179 GO_CentralGO_REF:0000033
FAM98CDogsarcoplasmic reticulum membrane located_inIEAUniProtKB:P21817 and ensembl:ENSP00000352608150520179 EnsemblGO_REF:0000107
FAM98CDogsmooth endoplasmic reticulum is_active_inIBAMGI:99659 more ...150520179 GO_CentralGO_REF:0000033
FAM98CDogZ disc is_active_inIBAMGI:99685 more ...150520179 GO_CentralGO_REF:0000033
1 to 14 of 14 rows

Molecular Function
1 to 11 of 11 rows

  
1 to 11 of 11 rows

PMID:30032202  



FAM98C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11114,598,841 - 114,602,316 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1114,597,464 - 114,602,708 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1115,063,305 - 115,204,391 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBIUU_Cfam_GSD_1.0
FAM98C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381938,403,093 - 38,409,088 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1938,403,093 - 38,409,088 (+)EnsemblGRCh38hg38GRCh38
GRCh371938,893,733 - 38,899,728 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361943,585,615 - 43,591,568 (+)NCBINCBI36Build 36hg18NCBI36
Celera1935,696,012 - 35,701,965 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1935,341,368 - 35,347,321 (+)NCBIHuRef
CHM1_11938,894,134 - 38,900,087 (+)NCBICHM1_1
T2T-CHM13v2.01941,205,269 - 41,211,264 (+)NCBIT2T-CHM13v2.0
Fam98c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39728,851,935 - 28,855,653 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl728,851,935 - 28,855,659 (-)EnsemblGRCm39 Ensembl
GRCm38729,152,510 - 29,157,104 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl729,152,510 - 29,156,234 (-)EnsemblGRCm38mm10GRCm38
MGSCv37729,937,529 - 29,941,229 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36728,861,272 - 28,864,943 (-)NCBIMGSCv36mm8
Celera723,722,600 - 23,726,298 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map716.94NCBI
Fam98c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8193,580,286 - 93,583,894 (-)NCBIGRCr8
mRatBN7.2184,452,806 - 84,456,414 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl184,452,814 - 84,456,385 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx189,864,075 - 89,867,620 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0198,323,646 - 98,327,191 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0191,619,922 - 91,623,467 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0188,095,240 - 88,098,828 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,095,241 - 88,098,785 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0189,270,393 - 89,274,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4184,285,593 - 84,289,101 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1184,363,704 - 84,367,212 (-)NCBI
Celera178,840,485 - 78,844,030 (-)NCBICelera
Cytogenetic Map1q21NCBI
Fam98c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554681,021,711 - 1,025,566 (-)NCBIChiLan1.0ChiLan1.0
FAM98C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22044,694,253 - 44,700,267 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11946,564,583 - 46,570,595 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01935,497,144 - 35,503,168 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11944,068,957 - 44,074,586 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1944,068,957 - 44,074,586 (+)Ensemblpanpan1.1panPan2
Fam98c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934912,996,817 - 13,001,070 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049368011,162,132 - 1,167,090 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049368011,162,178 - 1,166,621 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM98C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl647,315,417 - 47,319,485 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1647,315,406 - 47,319,486 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2642,815,850 - 42,819,953 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FAM98C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1633,045,851 - 33,054,525 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607310,992,307 - 10,998,326 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam98c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479411,864,635 - 11,868,418 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in FAM98C
39 total Variants


Assembly: CanFam3.1

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
1 114601725 114601726 G T snv German Spitz (GS104) View more Information




adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10


1 to 30 of 56 rows
RefSeq Transcripts XM_014120645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014120655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 56 rows

Ensembl Acc Id: ENSCAFT00000009547   ⟹   ENSCAFP00000008865
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1114,597,598 - 114,602,268 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000067712   ⟹   ENSCAFP00000063822
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1114,599,041 - 114,602,708 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000076198   ⟹   ENSCAFP00000045857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1114,597,464 - 114,602,268 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000076447   ⟹   ENSCAFP00000058138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1114,599,041 - 114,602,708 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000080029   ⟹   ENSCAFP00000053413
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1114,599,071 - 114,602,268 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845009688   ⟹   ENSCAFP00845007574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1115,063,305 - 115,181,156 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845009710   ⟹   ENSCAFP00845007592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1115,063,305 - 115,181,156 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845009740   ⟹   ENSCAFP00845007615
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1115,157,223 - 115,203,951 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845009748   ⟹   ENSCAFP00845007624
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1115,199,270 - 115,204,391 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845009758   ⟹   ENSCAFP00845007630
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1115,200,746 - 115,203,951 (-)Ensembl
RefSeq Acc Id: XM_014120645   ⟹   XP_013976120
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,598,841 - 114,602,315 (-)NCBI
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014120655   ⟹   XP_013976130
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,598,841 - 114,602,316 (-)NCBI
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022425960   ⟹   XP_022281668
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,598,841 - 114,602,315 (-)NCBI
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022425964   ⟹   XP_022281672
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,598,841 - 114,602,315 (-)NCBI
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022425970   ⟹   XP_022281678
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,598,841 - 114,602,315 (-)NCBI
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038451994   ⟹   XP_038307922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
RefSeq Acc Id: XM_038452002   ⟹   XP_038307930
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
RefSeq Acc Id: XM_038452011   ⟹   XP_038307939
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1114,003,025 - 114,006,008 (-)NCBI
RefSeq Acc Id: XM_038452012   ⟹   XP_038307940
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1114,003,025 - 114,006,008 (-)NCBI
RefSeq Acc Id: XM_038468228   ⟹   XP_038324156
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468229   ⟹   XP_038324157
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468230   ⟹   XP_038324158
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468231   ⟹   XP_038324159
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468232   ⟹   XP_038324160
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468233   ⟹   XP_038324161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468234   ⟹   XP_038324162
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468235   ⟹   XP_038324163
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,504 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468236   ⟹   XP_038324164
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,998 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038468237   ⟹   XP_038324165
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11114,773,998 - 114,776,980 (-)NCBI
RefSeq Acc Id: XM_038528982   ⟹   XP_038384910
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528983   ⟹   XP_038384911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528984   ⟹   XP_038384912
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528985   ⟹   XP_038384913
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528986   ⟹   XP_038384914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528987   ⟹   XP_038384915
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528988   ⟹   XP_038384916
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528989   ⟹   XP_038384917
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,429,733 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528990   ⟹   XP_038384918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,430,228 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038528991   ⟹   XP_038384919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01115,430,228 - 115,433,199 (-)NCBI
RefSeq Acc Id: XM_038593257   ⟹   XP_038449185
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593258   ⟹   XP_038449186
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593259   ⟹   XP_038449187
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593260   ⟹   XP_038449188
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593261   ⟹   XP_038449189
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593262   ⟹   XP_038449190
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593263   ⟹   XP_038449191
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593264   ⟹   XP_038449192
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593265   ⟹   XP_038449193
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,391,591 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038593266   ⟹   XP_038449194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,391,591 - 114,394,573 (-)NCBI
RefSeq Acc Id: XM_038657082   ⟹   XP_038513010
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657083   ⟹   XP_038513011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657084   ⟹   XP_038513012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657085   ⟹   XP_038513013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657086   ⟹   XP_038513014
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657087   ⟹   XP_038513015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657088   ⟹   XP_038513016
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657089   ⟹   XP_038513017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,200,513 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657091   ⟹   XP_038513019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,201,010 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_038657092   ⟹   XP_038513020
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01115,201,010 - 115,204,001 (-)NCBI
RefSeq Acc Id: XM_541643   ⟹   XP_541643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,598,841 - 114,602,315 (-)NCBI
Dog10K_Boxer_Tasha1114,002,532 - 114,006,008 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005389226
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01114,389,593 - 114,394,573 (-)NCBI
1 to 30 of 55 rows
Protein RefSeqs XP_013976120 (Get FASTA)   NCBI Sequence Viewer  
  XP_013976130 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281668 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281672 (Get FASTA)   NCBI Sequence Viewer  
  XP_022281678 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307922 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307930 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307939 (Get FASTA)   NCBI Sequence Viewer  
  XP_038307940 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324156 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324157 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324158 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324159 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324160 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324161 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324162 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324163 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324164 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324165 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384910 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384911 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384912 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384913 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384914 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384915 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384916 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384917 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449185 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 55 rows
1 to 5 of 60 rows
1 to 5 of 60 rows
RefSeq Acc Id: XP_013976130   ⟸   XM_014120655
- Peptide Label: isoform X8
- UniProtKB: A0A8C0L097 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013976120   ⟸   XM_014120645
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L097 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_541643   ⟸   XM_541643
- Peptide Label: isoform X6
- UniProtKB: A0A8C0L097 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022281678   ⟸   XM_022425970
- Peptide Label: isoform X7
- UniProtKB: A0A8C0L097 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022281672   ⟸   XM_022425964
- Peptide Label: isoform X5
- UniProtKB: A0A8C0L097 (UniProtKB/TrEMBL)
- Sequence:

RGD ID:13682325
Promoter ID:EPDNEW_C393
Type:initiation region
Name:FAM98C_1
Description:family with sequence similarity 98 member C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11114,602,240 - 114,602,300EPDNEW


1 to 40 of 64 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000005919 Ensembl
  ENSCAFG00845005309 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845009688.1 UniProtKB/TrEMBL
  ENSCAFT00845009740 ENTREZGENE
  ENSCAFT00845009740.1 UniProtKB/TrEMBL
  ENSCAFT00845009748.1 UniProtKB/TrEMBL
  ENSCAFT00845009758.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.10.490.160 UniProtKB/TrEMBL
  2.60.120.920 UniProtKB/TrEMBL
  2.80.10.50 UniProtKB/TrEMBL
  6.20.350.10 UniProtKB/TrEMBL
  IP3 receptor type 1 binding core, RIH domain UniProtKB/TrEMBL
InterPro B30.2/SPRY UniProtKB/TrEMBL
  B30.2/SPRY_sf UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/TrEMBL
  EF-hand-dom_pair UniProtKB/TrEMBL
  FAM98 UniProtKB/TrEMBL
  Ins145_P3_rcpt UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/TrEMBL
  MIR_dom_sf UniProtKB/TrEMBL
  MIR_motif UniProtKB/TrEMBL
  RIH_assoc-dom UniProtKB/TrEMBL
  RIH_dom UniProtKB/TrEMBL
  Ryan_recept UniProtKB/TrEMBL
  Ryanodine_IP3_receptor UniProtKB/TrEMBL
  Ryanodine_rcpt UniProtKB/TrEMBL
  Ryanrecept_TM4-6 UniProtKB/TrEMBL
  RYDR_Jsol UniProtKB/TrEMBL
  RyR/IP3R_RIH_dom_sf UniProtKB/TrEMBL
  SPRY1_RyR UniProtKB/TrEMBL
  SPRY2_RyR UniProtKB/TrEMBL
  SPRY3_RyR UniProtKB/TrEMBL
  SPRY_dom UniProtKB/TrEMBL
NCBI Gene FAM98C ENTREZGENE
PANTHER B30.2/SPRY DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  PROTEIN FAM98C UniProtKB/TrEMBL
  PTHR31353 UniProtKB/TrEMBL
  RYANODINE RECEPTOR 1 UniProtKB/TrEMBL
Pfam DUF2465 UniProtKB/TrEMBL
1 to 40 of 64 rows