ANAPC2 (anaphase promoting complex subunit 2) - Rat Genome Database

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Gene: ANAPC2 (anaphase promoting complex subunit 2) Canis lupus familiaris
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Symbol: ANAPC2
Name: anaphase promoting complex subunit 2
RGD ID: 12160457
Description: ENCODES a protein that exhibits ubiquitin protein ligase binding (inferred); INVOLVED IN negative regulation of gene expression (ortholog); positive regulation of axon extension (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adams-Oliver Syndrome 5 (ortholog); aplastic anemia (ortholog); FOUND IN anaphase-promoting complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: anaphase-promoting complex subunit 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,475,777 - 48,486,715 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,471,584 - 48,609,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha947,666,446 - 47,677,538 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0949,341,288 - 49,352,382 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl949,341,432 - 49,355,653 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1948,117,700 - 48,128,794 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0948,416,513 - 48,427,605 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0948,463,672 - 48,474,764 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ANAPC2DogAdams-Oliver Syndrome 5  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Adams-Oliver syndrome 5ClinVarPMID:16025100 more ...
ANAPC2Dogautosomal dominant intellectual developmental disorder 8  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with or without hyperkinetic movements and seizures and autosomal dominantClinVarPMID:16826528 more ...
ANAPC2Dogdevelopmental and epileptic encephalopathy 14  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 14ClinVarPMID:16025100 more ...
ANAPC2Dogepilepsy  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: EpilepsyClinVar 
ANAPC2DogJoubert syndrome 1  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial aplasia of the vermisClinVarPMID:16025100 more ...
ANAPC2DogKleefstra syndrome 1  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Kleefstra syndrome 1ClinVarPMID:16826528 more ...
ANAPC2Dogprimary coenzyme Q10 deficiency 7  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndromeClinVarPMID:28492532
ANAPC2DogRafiq syndrome  ISOANAPC2 (Homo sapiens)8554872ClinVar Annotator: match by term: Rafiq syndromeClinVarPMID:24566669 more ...


Biological Process
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ANAPC2Doganaphase-promoting complex-dependent catabolic process involved_inIEAUniProtKB:Q9UJX6 and ensembl:ENSP00000314004150520179 EnsemblGO_REF:0000107
ANAPC2Dogcell division involved_inIEAUniProtKB-KW:KW-0132150520179 UniProtGO_REF:0000043
ANAPC2Dogmetaphase/anaphase transition of mitotic cell cycle involved_inIBAPANTHER:PTN000231994 and SGD:S000004117150520179 GO_CentralGO_REF:0000033
ANAPC2Dognegative regulation of gene expression  ISOAnapc2 (Rattus norvegicus)9068941Ppfia1RGDPMID:17419996 and REF_RGD_ID:14696670
ANAPC2Dogpositive regulation of axon extension  ISOAnapc2 (Rattus norvegicus)9068941 RGDPMID:19167333 and REF_RGD_ID:2306262
ANAPC2Dogpositive regulation of dendrite morphogenesis  ISOAnapc2 (Rattus norvegicus)9068941 RGDPMID:19167333 and REF_RGD_ID:2306262
ANAPC2Dogpositive regulation of synapse maturation involved_inIEAUniProtKB:Q8BZQ7 and ensembl:ENSMUSP00000028341150520179 EnsemblGO_REF:0000107
ANAPC2Dogpositive regulation of synaptic plasticity involved_inIEAUniProtKB:Q8BZQ7 and ensembl:ENSMUSP00000028341150520179 EnsemblGO_REF:0000107
ANAPC2Dogprotein branched polyubiquitination involved_inIEAUniProtKB:Q9UJX6 and ensembl:ENSP00000314004150520179 EnsemblGO_REF:0000107
ANAPC2Dogprotein K11-linked ubiquitination involved_inIEAUniProtKB:Q9UJX6 and ensembl:ENSP00000314004150520179 EnsemblGO_REF:0000107
ANAPC2Dogprotein K11-linked ubiquitination involved_inIBAPANTHER:PTN000231994 and UniProtKB:Q9UJX6150520179 GO_CentralGO_REF:0000033
ANAPC2Dogprotein K48-linked ubiquitination involved_inIEAUniProtKB:Q9UJX6 and ensembl:ENSP00000314004150520179 EnsemblGO_REF:0000107
ANAPC2Dogprotein ubiquitination involved_inIEAUniPathway:UPA00143150520179 UniProtGO_REF:0000041
ANAPC2Dogubiquitin-dependent protein catabolic process involved_inIEAInterPro:IPR001373150520179 InterProGO_REF:0000002
1 to 14 of 14 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ANAPC2Doganaphase-promoting complex part_ofIEAUniProtKB:Q9UJX6 and ensembl:ENSP00000314004150520179 EnsemblGO_REF:0000107
ANAPC2Doganaphase-promoting complex part_ofIBAFB:FBgn0002791 more ...150520179 GO_CentralGO_REF:0000033

Molecular Function

  

PMID:22301074   PMID:30032202  



ANAPC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,475,777 - 48,486,715 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,471,584 - 48,609,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha947,666,446 - 47,677,538 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0949,341,288 - 49,352,382 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl949,341,432 - 49,355,653 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1948,117,700 - 48,128,794 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0948,416,513 - 48,427,605 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0948,463,672 - 48,474,764 (+)NCBIUU_Cfam_GSD_1.0
ANAPC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389137,174,784 - 137,188,560 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9137,174,784 - 137,188,560 (-)EnsemblGRCh38hg38GRCh38
GRCh379140,069,236 - 140,083,012 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369139,189,057 - 139,202,878 (-)NCBINCBI36Build 36hg18NCBI36
Build 349137,345,072 - 137,358,894NCBI
Celera9110,583,566 - 110,597,088 (-)NCBICelera
Cytogenetic Map9q34.3NCBI
HuRef9109,529,253 - 109,543,074 (-)NCBIHuRef
CHM1_19140,217,925 - 140,231,746 (-)NCBICHM1_1
T2T-CHM13v2.09149,412,464 - 149,426,223 (-)NCBIT2T-CHM13v2.0
Anapc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,162,469 - 25,175,928 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl225,162,490 - 25,175,927 (+)EnsemblGRCm39 Ensembl
GRCm38225,272,466 - 25,285,916 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,272,478 - 25,285,915 (+)EnsemblGRCm38mm10GRCm38
MGSCv37225,127,986 - 25,141,436 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36225,094,508 - 25,107,924 (+)NCBIMGSCv36mm8
Celera225,000,157 - 25,013,426 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map217.12NCBI
Anapc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8328,484,590 - 28,496,338 (+)NCBIGRCr8
mRatBN7.238,086,434 - 8,098,182 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl38,086,462 - 8,098,178 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx311,190,969 - 11,202,704 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0319,777,199 - 19,788,934 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0317,967,042 - 17,978,777 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.032,490,496 - 2,502,247 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl32,490,518 - 2,502,248 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.032,471,951 - 2,483,660 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,436,569 - 3,448,278 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.133,436,404 - 3,448,589 (+)NCBI
Celera32,913,015 - 2,924,724 (+)NCBICelera
Cytogenetic Map3p13NCBI
Anapc2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555135,183,472 - 5,194,253 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555135,183,472 - 5,194,253 (-)NCBIChiLan1.0ChiLan1.0
ANAPC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2112,210,577 - 2,224,304 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan192,213,159 - 2,226,638 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09108,234,949 - 108,248,227 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19137,204,356 - 137,217,652 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9137,204,356 - 137,217,652 (-)Ensemblpanpan1.1panPan2
Anapc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,566,104 - 202,577,692 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936669797,318 - 811,721 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936669797,475 - 808,952 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANAPC2
(Sus scrofa - pig)
No map positions available.
ANAPC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1121,000,885 - 1,014,710 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl121,000,952 - 1,016,261 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660584,290,548 - 4,304,375 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anapc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624760760,749 - 772,855 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624760760,815 - 772,116 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in ANAPC2
81 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10



Ensembl Acc Id: ENSCAFT00845043028   ⟹   ENSCAFP00845033736
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl949,341,432 - 49,355,565 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845043211   ⟹   ENSCAFP00845033876
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl949,354,597 - 49,355,653 (+)Ensembl
RefSeq Acc Id: XM_038486810   ⟹   XP_038342738
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1948,117,700 - 48,128,794 (+)NCBI
RefSeq Acc Id: XM_038548680   ⟹   XP_038404608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0948,463,672 - 48,474,764 (+)NCBI
RefSeq Acc Id: XM_038612616   ⟹   XP_038468544
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0948,416,513 - 48,427,605 (+)NCBI
RefSeq Acc Id: XM_038677901   ⟹   XP_038533829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0949,341,288 - 49,352,382 (+)NCBI
RefSeq Acc Id: XM_548357   ⟹   XP_548357
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1948,475,777 - 48,486,715 (+)NCBI
Dog10K_Boxer_Tasha947,666,446 - 47,677,538 (+)NCBI
Sequence:
RefSeq Acc Id: XP_548357   ⟸   XM_548357
- UniProtKB: A0A8P0P8M5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038342738   ⟸   XM_038486810
RefSeq Acc Id: XP_038468544   ⟸   XM_038612616
RefSeq Acc Id: XP_038533829   ⟸   XM_038677901
- UniProtKB: A0A8P0P8M5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038404608   ⟸   XM_038548680
- UniProtKB: A0A8P0P8M5 (UniProtKB/TrEMBL)
Cullin family profile

RGD ID:13684743
Promoter ID:EPDNEW_C2811
Type:initiation region
Name:ANAPC2_1
Description:anaphase promoting complex subunit 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1948,475,752 - 48,475,812EPDNEW


1 to 36 of 36 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000019483 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040011445 UniProtKB/TrEMBL
  ENSCAFG00845024357 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030976.5 UniProtKB/TrEMBL
  ENSCAFT00000065235.2 UniProtKB/TrEMBL
  ENSCAFT00000088170.2 UniProtKB/TrEMBL
  ENSCAFT00040021415.1 UniProtKB/TrEMBL
  ENSCAFT00040021750.1 UniProtKB/TrEMBL
  ENSCAFT00845043028 ENTREZGENE
  ENSCAFT00845043028.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
  Cullin Repeats UniProtKB/TrEMBL
  Cullin, Chain C, Domain 2 UniProtKB/TrEMBL
InterPro APC2-like UniProtKB/TrEMBL
  APC2_C UniProtKB/TrEMBL
  Cullin_homology UniProtKB/TrEMBL
  Cullin_homology_sf UniProtKB/TrEMBL
  Cullin_N UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
NCBI Gene ANAPC2 ENTREZGENE
PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 UniProtKB/TrEMBL
  PTHR45957 UniProtKB/TrEMBL
Pfam ANAPC2 UniProtKB/TrEMBL
  Cullin UniProtKB/TrEMBL
PROSITE CULLIN_2 UniProtKB/TrEMBL
SMART APC2 UniProtKB/TrEMBL
  CULLIN UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
  SSF75632 UniProtKB/TrEMBL
UniProt A0A8C0SCF4_CANLF UniProtKB/TrEMBL
  A0A8C0YW28_CANLF UniProtKB/TrEMBL
  A0A8I3PLH7_CANLF UniProtKB/TrEMBL
  A0A8P0P8M5 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8P0TGK8 UniProtKB/TrEMBL
VGNC ID VGNC:37849 ENTREZGENE
1 to 36 of 36 rows