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Gene: LOC480510 (alanyl-tRNA editing protein Aarsd1) Canis lupus familiaris

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Symbol:

LOC480510

Name:

alanyl-tRNA editing protein Aarsd1

RGD ID:

12149478

Description:

ENCODES a protein that exhibits Ser-tRNA(Ala) hydrolase activity (ortholog); INVOLVED IN regulation of translational fidelity (ortholog); FOUND IN cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

AARSD1; alanyl-tRNA synthetase domain containing 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	20,091,116 - 20,102,125 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	19,552,733 - 19,563,743 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	20,809,562 - 20,820,578 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	19,594,654 - 19,605,668 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	19,861,356 - 19,872,205 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	19,963,452 - 19,974,463 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

alanyl-tRNA aminoacylation (IEA)

aminoacyl-tRNA metabolism involved in translational fidelity (IEA)

regulation of translational fidelity (ISO)

Cellular Component

cytoplasm (IEA)

Molecular Function

alanine-tRNA ligase activity (IEA)

aminoacyl-tRNA editing activity (IEA)

ATP binding (IEA)

metal ion binding (IEA)

nucleic acid binding (IEA)

protein binding (ISO)

Ser-tRNA(Ala) hydrolase activity (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

LOC480510
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	20,091,116 - 20,102,125 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	19,552,733 - 19,563,743 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	20,809,562 - 20,820,578 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	19,594,654 - 19,605,668 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	19,861,356 - 19,872,205 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	19,963,452 - 19,974,463 (+)	NCBI		UU_Cfam_GSD_1.0

AARSD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	42,950,526 - 42,964,454 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	42,950,526 - 42,964,498 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	41,102,543 - 41,116,471 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	38,356,069 - 38,385,546 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	37,758,676 - 37,788,796 (-)	NCBI		Celera
Cytogenetic Map	17	q21.31	NCBI
HuRef	17	36,868,387 - 36,882,289 (-)	NCBI		HuRef
CHM1_1	17	41,338,174 - 41,352,160 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	43,807,669 - 43,821,595 (-)	NCBI		T2T-CHM13v2.0

Aarsd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	101,297,489 - 101,308,422 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	101,297,665 - 101,308,441 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	101,406,663 - 101,417,508 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	101,406,839 - 101,417,615 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	101,268,153 - 101,278,747 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	101,222,929 - 101,233,523 (-)	NCBI		MGSCv36	mm8
Celera	11	113,094,285 - 113,104,855 (-)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	64.95	NCBI

Aarsd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	86,840,874 - 86,854,077 (-)	NCBI		GRCr8
mRatBN7.2	10	86,340,625 - 86,353,732 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	86,340,626 - 86,353,729 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	91,377,995 - 91,391,213 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	90,852,888 - 90,865,992 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	86,246,194 - 86,259,298 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	89,317,974 - 89,331,078 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	89,317,975 - 89,331,078 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	89,115,998 - 89,136,327 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	90,002,331 - 90,015,435 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	85,058,109 - 85,071,213 (-)	NCBI		Celera
Cytogenetic Map	10	q31	NCBI

AARSD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	22,024,338 - 22,040,513 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	23,913,605 - 23,929,784 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	14,358,207 - 14,372,668 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	14,586,286 - 14,600,413 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

LOC101974638
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	19,410,489 - 19,422,843 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936490	17,652,296 - 17,664,589 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AARSD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	19,918,248 - 19,926,825 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	19,918,235 - 19,926,828 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

Variants

Variants in LOC480510
105 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005624433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005624434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022422960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038547214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038547215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038547216	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038611180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038611181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038611182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038676369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038676370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038676371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005624433 ⟹ XP_005624490

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	20,091,116 - 20,102,125 (+)	NCBI
Dog10K_Boxer_Tasha	9	19,552,733 - 19,563,743 (+)	NCBI

Sequence:

show sequence

TCCTTTGCCCTCGTGCTTCTGCGCGGAGACCCTCGCGCAGTGAATATTGTCCCCTGCGGCTCTC
CGTCGCTCCGCGGGCGGTCCAGCGTGCGCGGGTCCCGGCGTCCCGGGAAACAGCGGCGATGGCG
TTCCGGTGTCAGCGAGACAGCTACGCCCGCGAGTTCACCACCACAGTGGTCTCCTGCCGTCCCG
CGGAGTTGGAGACCGAAGGAAGCAACGGCAAGAAGGAAGTGCTGAGTGGCTTCCAAGTGGTGCT
GGAAGACACGCTGCTTTTCCCCGAGGGCGGGGGACAGCCTGATGACCATGGTACAATCAATGGC
ATCTCTGTGCTGCGAGTAACCCGCCGAGGGGCCCAGGCTGATCATTTCACACAGACACCCCTGG
CCCCTGGTACCGAAGTCCAGGTCCGGGTGGACTGGGAGCGGCGGTTTGACCATATGCAGCAGCA
TTCAGGGCAGCATCTCATCACAGCAGTTGCGGACCATCTGTTTGGGTTGAAGACTACATCATGG
GAGTTAGGGCGACTCCGGAGTGTGATTGAATTGGACAGCCCCTCTGTGACCATAGAGCAAGTGG
CCGCCATTGAGCAGAGCGTCAATGAAAAAATCAGGGACCGGCTGCCTGTGAATGTGCGGGAGCT
GAGCCTGGATGACCCTGAGGTGGAGCAGGTGAGGGGCCGAGGTTTGCCAGATGATCATGCGGGG
CCCATTCGAGTTGTCACCATTGAGAATGTTGATGCCAACATGTGCTGTGGGACCCATGTGAGCA
ATCTCAGTGACCTTCAGGTTATTAAAATTCTGGGCATTGAAAAGGGGAAAAAGAACAAAACCAA
CCTGGCATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAGCCATGGAACTGAAAAA
GCACTCACTGCACTACTTAAATGTGGAGTGGAGGATCACGTAGAAGCAGTGAAGAAGCTACAGA
ACTCTACCAAGCTCTTGCAGAAGAACAACCTGAATCTACTCAGAGACCTGGCCGTGCACGTCGC
CCACAGCCTTCGGAACAGCCCGGACTGGGGAGGTGTGGTCACGTTACATAGGAAGGAGGGTGAT
TCTGAGTTCATGAATATCATCGCCAATGAGATTGGGTCAGAGGAGACCCTCCTGTTCTTAACTG
TGGGCGATGAGAAAGGTGCTGGGCTCTTCCTACTGGCAGGGCCAGCTGAGGCCGTGGAGACCCT
GGGCCCCAGGGTGGCTGAGGTCCTGGAGGGCAAAGGAGCTGGGAAGAAAGGCCGCTTCCAGGGC
AAGGCCACCAAGATGAGCGGGCGGGCAGAGGCGCAGGCACTCCTGCAGGACTACATCAGCACTC
AGAGCGCTGAGGAGTGAGGACTCTGAGGACTCTGCCACCCCCCGGGGGCTCCTGCCATTGAGAA
TGGGCCTCTCAGGACCACAGAGAGAGTCTCTTGGACAGTAAAATAGTTTGACTTGAAATGGTCG
CGGTACCACACGGATATGACTGATTTGTACAGTATTCTCTGGTGTGTTTATGCGAGGAGTATTT
GTGAATAAACAGCTTTCTAATCTGGCCCCTGTTAGGCATCACCCTCGCCAGGGAGCATTATGTT
GATAAAGTGTACTAATTTCTCTAAAGCAGCTGCAACTGTACTTCCTGTGGAAATTCAACTGCCT
GAGGGAAGGGCAAGTCAGCCTGGAGGCTCTGCGTAGGGCTTTAATTCATTCATATTGCTTTGTT
TTCTTTTTGTCCTGATTTTCCTCCTCCTCCTGTGTTTTATAACTAAAAAGTATCGGTGACTTTG
CACATAGGTCAAGAGGCCACACAAATGCAGAAGGAGGAGGATACTCCCTGTCTGTTGCGGAGGC
AGAGGAGGGATGGAGGAAGGGACCGTGGGAGACTAACCCAGGGAGAGCTAGTGTCGCATTATTC
ATGTCAGACCATGAGCCTTTCAGAATCCTTGGTAGAGATGAAGTGTAGTGATGAAAGGAAGACA
GACCAGTTCTAAATTTGCATGCATCTAATAACGGCCTCAAAATACATAAAGCAGAAACTGACAG
CTAAAAGAAGAAACAGACAAATTCATGCTCGATGGAAGATTTAAATGGATCTTTCAGTAACTGA
TGGCACAACAGGAAGCATTACCTCATTAAGAACGTGAACATCAGAGATTCATAGACCTGAGTGG
ATCCAGCATTGTACACCCATGGGTGGTAAAACTAGGAATAAAAAAAAGGAAGTGATTCATTTTT
AAAAGATAGTGTTTACCTCTGGGGGAAAGAAGTGAAAAGGATGGAGAAGGGACCCGAGATGGGG
ATGCGAGGGTGGTTTCTGGGGTGCCGGCAGTGTTCTTGGACTGGGTGGAAGTTACATAGTTGTT
TATTTAATAGTTATTCATTATAGTCTGTTTTATTCCATGATGTTGTATTTCACCGTATAAGAAT
ACAACTAAAAAAAATTCTGGGTTCTGTCA

hide sequence

RefSeq Acc Id:

XM_005624434 ⟹ XP_005624491

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	20,091,116 - 20,102,125 (+)	NCBI
Dog10K_Boxer_Tasha	9	19,552,733 - 19,563,743 (+)	NCBI

Sequence:

show sequence

TCCTTTGCCCTCGTGCTTCTGCGCGGAGACCCTCGCGCAGTGAATATTGTCCCCTGCGGCTCTC
CGTCGCTCCGCGGGCGGTCCAGCGTGCGCGGGTCCCGGCGTCCCGGGAAACAGCGGCGATGGCG
TTCCGGTGTCAGCGAGACAGCTACGCCCGCGAGTTCACCACCACAGTGGTCTCCTGCCGTCCCG
CGGAGTTGGAGACCGAAGGAAGCAACGGCAAGAAGGAAGTGCTGAGTGGCTTCCAAGTGGTGCT
GGAAGACACGCTGCTTTTCCCCGAGGGCGGGGGACAGCCTGATGACCATGGTACAATCAATGGC
ATCTCTGTGCTGCGAGTAACCCGCCGAGGGGCCCAGGCTGATCATTTCACACAGACACCCCTGG
CCCCTGGTACCGAAGTCCAGGTCCGGGTGGACTGGGAGCGGCGGTTTGACCATATGCAGCAGCA
TTCAGGGCAGCATCTCATCACAGCAGTTGCGGACCATCTGTTTGGGTTGAAGACTACATCATGG
GAGTTAGGGCGACTCCGGAGTGTGATTGAATTGGACAGCCCCTCTGTGACCATAGAGCAAGTGG
CCGCCATTGAGCAGAGCGTCAATGAAAAAATCAGGGACCGGCTGCCTGTGAATGTGCGGGAGCT
GAGCCTGGATGACCCTGAGGTGGAGCAGGTGAGGGGCCGAGGTTTGCCAGATGATCATGCGGGG
CCCATTCGAGTTGTCACCATTGAGAATGTTGATGCCAACATGTGCTGTGGGACCCATGTGAGCA
ATCTCAGTGACCTTCAGGTTATTAAAATTCTGGGCATTGAAAAGGGGAAAAAGAACAAAACCAA
CCTGGCATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAGCCATGGAACTGAAAAA
GCACTCACTGCACTACTTAAATGTGGAGTGGAGGATCACGTAGAAGCAGTGAAGAAGCTACAGA
ACTCTACCAAGCTCTTGCAGAAGAACAACCTGAATCTACTCAGAGACCTGGCCGTGCACGTCGC
CCACAGCCTTCGGAACAGCCCGGACTGGGGAGGTGTGGTCACGTTACATAGGGTGGCTGAGGTC
CTGGAGGGCAAAGGAGCTGGGAAGAAAGGCCGCTTCCAGGGCAAGGCCACCAAGATGAGCGGGC
GGGCAGAGGCGCAGGCACTCCTGCAGGACTACATCAGCACTCAGAGCGCTGAGGAGTGAGGACT
CTGAGGACTCTGCCACCCCCCGGGGGCTCCTGCCATTGAGAATGGGCCTCTCAGGACCACAGAG
AGAGTCTCTTGGACAGTAAAATAGTTTGACTTGAAATGGTCGCGGTACCACACGGATATGACTG
ATTTGTACAGTATTCTCTGGTGTGTTTATGCGAGGAGTATTTGTGAATAAACAGCTTTCTAATC
TGGCCCCTGTTAGGCATCACCCTCGCCAGGGAGCATTATGTTGATAAAGTGTACTAATTTCTCT
AAAGCAGCTGCAACTGTACTTCCTGTGGAAATTCAACTGCCTGAGGGAAGGGCAAGTCAGCCTG
GAGGCTCTGCGTAGGGCTTTAATTCATTCATATTGCTTTGTTTTCTTTTTGTCCTGATTTTCCT
CCTCCTCCTGTGTTTTATAACTAAAAAGTATCGGTGACTTTGCACATAGGTCAAGAGGCCACAC
AAATGCAGAAGGAGGAGGATACTCCCTGTCTGTTGCGGAGGCAGAGGAGGGATGGAGGAAGGGA
CCGTGGGAGACTAACCCAGGGAGAGCTAGTGTCGCATTATTCATGTCAGACCATGAGCCTTTCA
GAATCCTTGGTAGAGATGAAGTGTAGTGATGAAAGGAAGACAGACCAGTTCTAAATTTGCATGC
ATCTAATAACGGCCTCAAAATACATAAAGCAGAAACTGACAGCTAAAAGAAGAAACAGACAAAT
TCATGCTCGATGGAAGATTTAAATGGATCTTTCAGTAACTGATGGCACAACAGGAAGCATTACC
TCATTAAGAACGTGAACATCAGAGATTCATAGACCTGAGTGGATCCAGCATTGTACACCCATGG
GTGGTAAAACTAGGAATAAAAAAAAGGAAGTGATTCATTTTTAAAAGATAGTGTTTACCTCTGG
GGGAAAGAAGTGAAAAGGATGGAGAAGGGACCCGAGATGGGGATGCGAGGGTGGTTTCTGGGGT
GCCGGCAGTGTTCTTGGACTGGGTGGAAGTTACATAGTTGTTTATTTAATAGTTATTCATTATA
GTCTGTTTTATTCCATGATGTTGTATTTCACCGTATAAGAATACAACTAAAAAAAATTCTGGGT
TCTGTCA

hide sequence

RefSeq Acc Id:

XM_022422960 ⟹ XP_022278668

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	20,091,116 - 20,099,052 (+)	NCBI
Dog10K_Boxer_Tasha	9	19,552,733 - 19,560,653 (+)	NCBI

Sequence:

show sequence

TCCTTTGCCCTCGTGCTTCTGCGCGGAGACCCTCGCGCAGTGAATATTGTCCCCTGCGGCTCTC
CGTCGCTCCGCGGGCGGTCCAGCGTGCGCGGGTCCCGGCGTCCCGGGAAACAGCGGCGATGGCG
TTCCGGTGTCAGCGAGACAGCTACGCCCGCGAGTTCACCACCACAGTGGTCTCCTGCCGTCCCG
CGGAGTTGGAGACCGAAGGAAGCAACGGCAAGAAGGAAGTGCTGAGTGGCTTCCAAGTGGTGCT
GGAAGACACGCTGCTTTTCCCCGAGGGCGGGGGACAGCCTGATGACCATGGTACAATCAATGGC
ATCTCTGTGCTGCGAGTAACCCGCCGAGGGGCCCAGGCTGATCATTTCACACAGACACCCCTGG
CCCCTGGTACCGAAGTCCAGGTCCGGGTGGACTGGGAGCGGCGGTTTGACCATATGCAGCAGCA
TTCAGGGCAGCATCTCATCACAGCAGTTGCGGACCATCTGTTTGGGTTGAAGACTACATCATGG
GAGTTAGGGCGACTCCGGAGTGTGATTGAATTGGACAGCCCCTCTGTGACCATAGAGCAAGTGG
CCGCCATTGAGCAGAGCGTCAATGAAAAAATCAGGGACCGGCTGCCTGTGAATGTGCGGGAGCT
GAGCCTGGATGACCCTGAGGTGGAGCAGGTGAGGGGCCGAGGTTTGCCAGATGATCATGCGGGG
CCCATTCGAGTTGTCACCATTGAGAATGTTGATGCCAACATGTGCTGTGGGACCCATGTGAGCA
ATCTCAGTGACCTTCAGGTTATTAAAATTCTGGGCATTGAAAAGGGGAAAAAGAACAAAACCAA
CCTGGCATTTCTGGCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAGCCATGGAACTGAAAAA
GCACTCACTGCACTACTTAAATGTGGAGTGGAGGATCACGTAGAAGCAGTGAAGAAGCTACAGA
ACTCTACCAAGCTCTTGCAGAAGAACAACCTGAATCTACTCAGAGACCTGGCCGTGCACGTCGC
CCACAGCCTTCGGAACAGCCCGGACTGGGGAGGTGTGGTCACGTTACATAGGAAGGAGGGTGAT
TCTGAGTTCATGAATATCATCGCCAATGAGATTGGGTCAGAGGTCTCTCTTTTGCATTTACTCC
AAAAAACACCTTTTAGGGTCCCTGCTCCAGGCCAAACAGTATGTATGTCTCTCTTCATAATTCC
AGGTAGAGTATACTGATTTTCAAGGAGCTAACTCAAGTCTGGAGGCAAATGTGTTTGTCAACAT
TTCTAATAGAGGGTGGTCAGTGCTGGGGGTGGAAGAACGTCACCTGAAAGAGTGGGGGAGGCCT
CAGGACAGGGGCCCTGGAGGACTGCTTAGTGGTCATCAGACAGACAAGGCAGCAGAGGTCTCCA
GGCAGAGGGAAACAGAGCTTTAGCTAGTGGCAGGCGCAGGGTGCGTGGGGGAAGGCGGTGGCTA
GGTTGCAAAGGTTGGTGGGAGTCAGATCACAAAAGGCTTTAGCACCTGGCCATAGCAGCCTTCT
GCCTGCTTCTTGGTGTTTAATATAAGTTCCCATAGTCATTCTTGAAAAGTATCTTGGTCTTGGT
AGGCTAGAGTATAGGGGCTGCATTATCACTTATCAGGAACATTACACATGGTTTAGTAGCAAAA
AACCTGAACTTGAGACTGAGGAGAGGGTGGGGTTTAGGGGGTTTGACCCCAGTTTCTTAAGTAT
CAGGGCTTATCTCCTT

hide sequence

RefSeq Acc Id:

XM_038485451 ⟹ XP_038341379

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	19,594,654 - 19,605,668 (+)	NCBI

RefSeq Acc Id:

XM_038485452 ⟹ XP_038341380

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	19,594,654 - 19,602,578 (+)	NCBI

RefSeq Acc Id:

XM_038485453 ⟹ XP_038341381

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	19,594,654 - 19,605,668 (+)	NCBI

RefSeq Acc Id:

XM_038547214 ⟹ XP_038403142

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	19,963,452 - 19,974,463 (+)	NCBI

RefSeq Acc Id:

XM_038547215 ⟹ XP_038403143

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	19,963,452 - 19,971,373 (+)	NCBI

RefSeq Acc Id:

XM_038547216 ⟹ XP_038403144

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	19,963,452 - 19,974,463 (+)	NCBI

RefSeq Acc Id:

XM_038611180 ⟹ XP_038467108

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	19,861,356 - 19,872,205 (+)	NCBI

RefSeq Acc Id:

XM_038611181 ⟹ XP_038467109

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	19,861,356 - 19,869,116 (+)	NCBI

RefSeq Acc Id:

XM_038611182 ⟹ XP_038467110

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	19,861,356 - 19,872,205 (+)	NCBI

RefSeq Acc Id:

XM_038676369 ⟹ XP_038532297

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	20,809,562 - 20,820,578 (+)	NCBI

RefSeq Acc Id:

XM_038676370 ⟹ XP_038532298

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	20,809,562 - 20,817,488 (+)	NCBI

RefSeq Acc Id:

XM_038676371 ⟹ XP_038532299

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	20,809,562 - 20,820,578 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005624490	(Get FASTA)	NCBI Sequence Viewer
	XP_005624491	(Get FASTA)	NCBI Sequence Viewer
	XP_022278668	(Get FASTA)	NCBI Sequence Viewer
	XP_038341379	(Get FASTA)	NCBI Sequence Viewer
	XP_038341380	(Get FASTA)	NCBI Sequence Viewer
	XP_038341381	(Get FASTA)	NCBI Sequence Viewer
	XP_038403142	(Get FASTA)	NCBI Sequence Viewer
	XP_038403143	(Get FASTA)	NCBI Sequence Viewer
	XP_038403144	(Get FASTA)	NCBI Sequence Viewer
	XP_038467108	(Get FASTA)	NCBI Sequence Viewer
	XP_038467109	(Get FASTA)	NCBI Sequence Viewer
	XP_038467110	(Get FASTA)	NCBI Sequence Viewer
	XP_038532297	(Get FASTA)	NCBI Sequence Viewer
	XP_038532298	(Get FASTA)	NCBI Sequence Viewer
	XP_038532299	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000021594.5

RefSeq Acc Id:

XP_005624491 ⟸ XM_005624434

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAFRCQRDSYAREFTTTVVSCRPAELETEGSNGKKEVLSGFQVVLEDTLLFPEGGGQPDDHGTI
NGISVLRVTRRGAQADHFTQTPLAPGTEVQVRVDWERRFDHMQQHSGQHLITAVADHLFGLKTT
SWELGRLRSVIELDSPSVTIEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVRGRGLPDDH
AGPIRVVTIENVDANMCCGTHVSNLSDLQVIKILGIEKGKKNKTNLAFLAGNRVLKWMERSHGT
EKALTALLKCGVEDHVEAVKKLQNSTKLLQKNNLNLLRDLAVHVAHSLRNSPDWGGVVTLHRVA
EVLEGKGAGKKGRFQGKATKMSGRAEAQALLQDYISTQSAEE

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RefSeq Acc Id:	XP_005624490 ⟸ XM_005624433
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KGQ8 (UniProtKB/TrEMBL), A0A8P0SIX9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAFRCQRDSYAREFTTTVVSCRPAELETEGSNGKKEVLSGFQVVLEDTLLFPEGGGQPDDHGTI NGISVLRVTRRGAQADHFTQTPLAPGTEVQVRVDWERRFDHMQQHSGQHLITAVADHLFGLKTT SWELGRLRSVIELDSPSVTIEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVRGRGLPDDH AGPIRVVTIENVDANMCCGTHVSNLSDLQVIKILGIEKGKKNKTNLAFLAGNRVLKWMERSHGT EKALTALLKCGVEDHVEAVKKLQNSTKLLQKNNLNLLRDLAVHVAHSLRNSPDWGGVVTLHRKE GDSEFMNIIANEIGSEETLLFLTVGDEKGAGLFLLAGPAEAVETLGPRVAEVLEGKGAGKKGRF QGKATKMSGRAEAQALLQDYISTQSAEE hide sequence

RefSeq Acc Id:

XP_022278668 ⟸ XM_022422960

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAFRCQRDSYAREFTTTVVSCRPAELETEGSNGKKEVLSGFQVVLEDTLLFPEGGGQPDDHGTI
NGISVLRVTRRGAQADHFTQTPLAPGTEVQVRVDWERRFDHMQQHSGQHLITAVADHLFGLKTT
SWELGRLRSVIELDSPSVTIEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVRGRGLPDDH
AGPIRVVTIENVDANMCCGTHVSNLSDLQVIKILGIEKGKKNKTNLAFLAGNRVLKWMERSHGT
EKALTALLKCGVEDHVEAVKKLQNSTKLLQKNNLNLLRDLAVHVAHSLRNSPDWGGVVTLHRKE
GDSEFMNIIANEIGSEVSLLHLLQKTPFRVPAPGQTVCMSLFIIPGRVY

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RefSeq Acc Id:	XP_038341379 ⟸ XM_038485451
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038341381 ⟸ XM_038485453
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038341380 ⟸ XM_038485452
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038467108 ⟸ XM_038611180
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038467110 ⟸ XM_038611182
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038467109 ⟸ XM_038611181
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038532297 ⟸ XM_038676369
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KGQ8 (UniProtKB/TrEMBL), A0A8P0SIX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038532299 ⟸ XM_038676371
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038532298 ⟸ XM_038676370
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038403142 ⟸ XM_038547214
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KGQ8 (UniProtKB/TrEMBL), A0A8P0SIX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038403144 ⟸ XM_038547216
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038403143 ⟸ XM_038547215
- Peptide Label:	isoform X2

Protein Domains

Alanyl-transfer RNA synthetases family profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000045298	UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000023254.5	UniProtKB/TrEMBL
Gene3D-CATH	2.40.30.130	UniProtKB/TrEMBL
	Threonyl-trna Synthetase, Chain A, domain 2	UniProtKB/TrEMBL
InterPro	Ala-tRNA-synth_IIc_core	UniProtKB/TrEMBL
	Alanyl-tRNA_Editing_Enzymes	UniProtKB/TrEMBL
	Thr/Ala-tRNA-synth_IIc_edit	UniProtKB/TrEMBL
	Transl_B-barrel_sf	UniProtKB/TrEMBL
	tRNA_SAD	UniProtKB/TrEMBL
NCBI Gene	AARSD1	ENTREZGENE
PANTHER	ALANYL-TRNA EDITING PROTEIN	UniProtKB/TrEMBL
	ALANYL-TRNA EDITING PROTEIN AARSD1	UniProtKB/TrEMBL
Pfam	tRNA_SAD	UniProtKB/TrEMBL
PROSITE	AA_TRNA_LIGASE_II_ALA	UniProtKB/TrEMBL
SMART	tRNA_SAD	UniProtKB/TrEMBL
Superfamily-SCOP	ThrRS/AlaRS common domain	UniProtKB/TrEMBL
	Translation proteins	UniProtKB/TrEMBL
UniProt	A0A8C0KGQ8	ENTREZGENE
	A0A8P0SIX9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-01-12	LOC480510	alanyl-tRNA editing protein Aarsd1	AARSD1	alanyl-tRNA synthetase domain containing 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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