Gene: ATXN7L2 (ataxin 7 like 2) Canis lupus familiaris |
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Analyze |
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Symbol: |
ATXN7L2 |
Name: |
ataxin 7 like 2 |
RGD ID: |
12141873 |
Description: |
ASSOCIATED WITH autistic disorder (ortholog); hereditary spastic paraplegia 63 (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
ataxin-7-like protein 2 |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
CanFam3.1 - Dog CanFam3.1 Assembly |
Position: |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 42,366,974 - 42,375,878 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 42,366,874 - 42,375,846 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 45,141,839 - 45,150,754 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 42,697,559 - 42,706,476 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 42,697,576 - 42,706,478 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 42,430,354 - 42,439,264 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 42,388,210 - 42,397,127 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 42,823,201 - 42,832,120 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Disease Annotations - ClinVar
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References
Genomics
Comparative Map Data
ATXN7L2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 42,366,974 - 42,375,878 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 42,366,874 - 42,375,846 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 45,141,839 - 45,150,754 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 42,697,559 - 42,706,476 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 42,697,576 - 42,706,478 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 42,430,354 - 42,439,264 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 42,388,210 - 42,397,127 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 42,823,201 - 42,832,120 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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ATXN7L2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 109,483,905 - 109,492,804 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 109,483,479 - 109,492,804 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 110,026,527 - 110,035,426 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 109,828,084 - 109,836,879 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 109,738,602 - 109,747,396 | NCBI | | | | | Celera | 1 | 108,295,911 - 108,304,776 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p13.3 | NCBI | | | | | HuRef | 1 | 107,919,489 - 107,928,354 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 110,141,425 - 110,150,290 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 109,516,680 - 109,525,579 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Atxn7l2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 108,109,538 - 108,117,843 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 108,109,538 - 108,118,250 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 108,202,222 - 108,210,577 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 108,202,222 - 108,210,934 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 108,005,173 - 108,013,852 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 108,330,311 - 108,338,990 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 110,536,013 - 110,544,743 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | F2.3 | NCBI | | | | | cM Map | 3 | 46.87 | NCBI | | | | |
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Atxn7l2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 198,527,066 - 198,535,899 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 195,838,920 - 195,847,339 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 195,838,981 - 195,847,315 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 203,482,140 - 203,490,559 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 201,364,254 - 201,372,673 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 196,181,203 - 196,189,622 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 210,992,904 - 211,001,287 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 210,992,953 - 211,001,258 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 230,462,242 - 230,470,612 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 203,767,580 - 203,776,399 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 203,730,331 - 203,738,659 (-) | NCBI | | | | | Celera | 2 | 188,483,792 - 188,492,175 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q34 | NCBI | | | | |
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Atxn7l2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955435 | 12,904,829 - 12,914,694 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955435 | 12,904,829 - 12,913,351 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ATXN7L2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 117,811,990 - 117,820,820 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 116,971,694 - 116,980,725 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 111,861,243 - 111,870,135 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 111,089,893 - 111,098,688 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 111,089,913 - 111,097,699 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Atxn7l2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ATXN7L2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 110,637,237 - 110,646,041 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 110,637,233 - 110,646,081 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 121,095,593 - 121,104,444 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ATXN7L2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 24,054,350 - 24,063,159 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 24,054,483 - 24,063,064 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 34,397,251 - 34,406,058 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Atxn7l2 (Heterocephalus glaber - naked mole-rat) |
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Expression
RNA-SEQ Expression
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alimentary part of gastrointestinal system
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6
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5
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5
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23
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22
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16
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6
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6
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6
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6
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33
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22
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12
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14
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10
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{{data.value}}
RGD:{{ data.value }}
Sequence
Ensembl Acc Id: |
ENSCAFT00000031543 ⟹ ENSCAFP00000029364 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 6 | 42,367,107 - 42,375,846 (-) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00000035305 ⟹ ENSCAFP00000030550 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 6 | 42,366,874 - 42,375,846 (-) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00000077698 ⟹ ENSCAFP00000047273 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 6 | 42,366,874 - 42,373,769 (-) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845005112 ⟹ ENSCAFP00845004067 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 6 | 42,697,576 - 42,706,478 (-) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845005139 ⟹ ENSCAFP00845004088 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 6 | 42,697,578 - 42,706,441 (-) | Ensembl |
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Ensembl Acc Id: |
ENSCAFT00845005147 ⟹ ENSCAFP00845004089 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 Ensembl | 6 | 42,697,715 - 42,706,478 (-) | Ensembl |
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RefSeq Acc Id: |
XM_005621821 ⟹ XP_005621878 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 | 6 | 42,366,974 - 42,375,878 (-) | NCBI | Dog10K_Boxer_Tasha | 6 | 45,141,847 - 45,150,754 (-) | NCBI |
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Sequence: |
GGCGCCGGGGCGGGCGCGCGTCCGCGGCGGTGATGGCGGTGCGTGAACGCGCGGCGGCAGCAAT GGCCGCTCTGGAGCGGCGGGTGCCGAGTCTCGATGACTTCGCGGGACAGAGCTGGAGCTCGTGG GTGGAACGGGCCGACCTGCCCGCGGCCGACGGGGCTGAGTTGGAGGAGAGTAACAAAAACACGA AGAAGTTGGATGCCATGACCCTCATTAAAGAAGACATGTCCATCTTCGGGCACTGCCCTGCCCA TGACGACTTCTATTTGGTTGTGTGTAACCACTGCAGCCAAGTGGTGAAGCCTCAAGCTTTCCAG AAGCACTGCGAAAGAAGACATGGGCCCCTCAGCAAGCTTTATGCCCGGGCCCCACCCCCACCTC CAGCCCCTGCCAGCTCTCAGAAATGCCATGTAGTGAATGGGCAGGGCCCAGCTTGTAGGGCCCC AGGTTCCACCAAAACCTCCTCCAGGGAGAAGGGCCAGGGGTCCCGGAGCCGTGGCCACCAGCCT CCTGAGAAGACACAGAAGGACAACCTCTGCCTTTTCGTGCCTGTGGTGAATCTGGAGAAGATGT CCAGTCTCCCGAAGCCCGATGGACATGGAATCAGGGTGGCCCCGCCCTCTGCTTTCCTCAGCCA GCCTGGTGGCCTCACCAAGGACTCCCCTGGAAAAACTCCCATGGCACCCCCTTCTAAAGAACCT CCTGGGAGAGAGAGCATCGAGATGACCCCCAGTGAGGGCCCCAGTCACCGGGCTGAAGGCAGCC CCCCTGAAAAGGAGCCTGGTGGGGCCAGGCTGACCCACAAAACCCACCGGAAGATGGCCCGGAA GGAGTGCGACCTCAACAGGCAGTGTGGGGTAATAAACCCAGAGACCAAAAAGATCTGTACCCGG CTGCTGACCTGCAAGATCCACTCGGTGCACCAGCGCCGGGAGGTCCAGGGCAGAGCCAAGGACT TTGACGTGCTAGTGGCAGAGCTGAAGGCCAATTCCCGCAAAGGGGAGTCTCCCAAAGAGAAGAG CCCAGGGCGCAAGGAGCCGGCTCTTGAGCGCCCCTCCCAGGAGCACCCCTCCTCAGGCCAGGCT GTGGCAGCGGCCGCCCCCAGCAGCACCTTCTCTGCTCGTGCCAAGCAGACCTACCCGTACTGTG CACTGCCCAGGTCCCGGGCCTCCTCTGAGAGTGAGTTGGATGATGAAGGCCCCTGTGGTGGTGA TGGGGACCCAGGCCTGTTCCCCTTTCCCCTGCCCCGGGGTGGGGCCCAGGCCTCCAGCGAGGAG AGTGAGGAGGAGGGGACATCTGAGGACCTCCACCTCCCCCCTGACTGCCATTATGCAACCCGGC CCCCGCGGCCACAGGCGTTCTGCACCTTTGGGAGCCGGCTGGTGAGTCCAGGATGCTACGTGTT TAGCCGCCGGCTGGACCGGTTCTGCTCAGCACTGAGCTCCATGCTGGAGCGGCACCTCAGCTCT CACATGTGGAAGAAGATCCCACCGGCAGCGGAACCTCCATCCCACCCTGTCAGCTCCCCACTCT CTGCTCCCCTGAGCCCATCCTCTACGGGCAGCTGCCCCCGCCTCCCAGGCCCACCCCCCAGACC TGCCTGCCCAGCCTCCACGTCCCCCGCCAAGGACAGCCTGGTCCCCAGCTACCCTGCCGGCTCC CCCAGTGTGGCAGCCGCCTGCAGCCAGGCAGAGTGCACGGGCGGGAGCCAGGCCATCACCTCAC CACTGCCTGCCAACACGCCGTCCCCATCCTTCAGCAAACTCCCACCATCGAAGGCTAGCAAGTC ATCCAAAGGCAAGGACGGGCCCGAGGCGGAGGCCCCTTCTCGAAAGCGAAAGTTATCCCCAGGC CCCACCACTTTCAAACGGACCTGCATCCTGGAGCCCTCTGGCAAAGGCAAACCCTCCGGCTGCC GAGGCCTCTCGGCCAAGACTAAAACAGCCCTGGGCGTGGGGCTTAATGGGACGGTGGGGCCAAG AGTGAAGCGGGCAGGGCCGCTGGACTGTCGGGCTTCCCCTCATCAGGCCCCTGCACCCGTCAAG GCTTCTCAGCTGGACAACCGGGGAGCGGCTGGACACCCAGCCAAGGCCCTGCCAACCAATTGCC TCTCTGAGGAGGAGGTAGCCAAGAAGCGGAAAAACCTGGCCACTTACTGCCGGCCGGTGAAGGC CAAGCACTGCCAGGCCGGCACCCCTGCCGATGCGGCCTGCCCCGTGCGCCGCAAGAAGCCGGGT CCTGCCGTGGCCTTTGAGGAGAAGTGTTCCACACTGAAGGAACTGGAGCTCCCTCTGTCCCCGA AGGAAAGGAAGTTGGACTTCATGAACTCTGATGGGAAAGTCTAAAGCCCATTAACAAGAAAGTG CCTGCCCACTGCGATGGAGCCGCCAGCACCTCCTCCCCTCCAGATCCGGGCCCCAGGCTGCTGC CGCTTTTTATAACTTTATATTATTTTTTTTAAGAAAAAAAACTCTTTAAAATACCTCAA
hide sequence
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RefSeq Acc Id: |
XM_005621822 ⟹ XP_005621879 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 | 6 | 42,366,974 - 42,375,878 (-) | NCBI | Dog10K_Boxer_Tasha | 6 | 45,141,852 - 45,150,754 (-) | NCBI |
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Sequence: |
GGCGCCGGGGCGGGCGCGCGTCCGCGGCGGTGATGGCGGTGCGTGAACGCGCGGCGGCAGCAAT GGCCGCTCTGGAGCGGCGGGTGCCGAGTCTCGATGACTTCGCGGGACAGAGCTGGAGCTCGTGG GTGGAACGGGCCGACCTGCCCGCGGCCGACGGGGCTGAGTTGGAGGAGAGTAACAAAAACACGA AGAAGTTGGATGCCATGACCCTCATTAAAGAAGACATGTCCATCTTCGGGCACTGCCCTGCCCA TGACGACTTCTATTTGGTTGTGTGTAACCACTGCAGCCAAGTGGTGAAGCCTCAAGCTTTCCAG AAGCACTGCGAAAGAAGACATGGGCCCCTCAGCAAGCTTTATGCCCGGGCCCCACCCCCACCTC CAGCCCCTGCCAGCTCTCAGAAATGCCATGTAGTGAATGGGCAGGGCCCAGCTTGTAGGGCCCC AGGTTCCACCAAAACCTCCTCCAGGGAGAAGGGCCAGGGGTCCCGGAGCCGTGGCCACCAGCCT CCTGAGAAGACACAGAAGGACAACCTCTGCCTTTTCGTGCCTGTGGTGAATCTGGAGAAGATGT CCAGTCTCCCGAAGCCCGATGGACATGGAATCAGGGTGGCCCCGCCCTCTGCTTTCCTCAGCCA GCCTGGTGGCCTCACCAAGGACTCCCCTGGAAAAACTCCCATGGCACCCCCTTCTAAAGAACCT CCTGGGAGAGAGAGCATCGAGATGACCCCCAGTGAGGGCCCCAGTCACCGGGCTGAAGGCAGCC CCCCTGAAAAGGAGCCTGGTGGGGCCAGGCTGACCCACAAAACCCACCGGAAGATGGCCCGGAA GGAGTGCGACCTCAACAGGCAGTGTGGGGTAATAAACCCAGAGACCAAAAAGATCTGTACCCGG CTGCTGACCTGCAAGATCCACTCGGTGCACCAGCGCCGGGAGGTCCAGGGCAGAGCCAAGGACT TTGACGTGCTAGTGGCAGAGCTGAAGGCCAATTCCCGCAAAGGGGAGTCTCCCAAAGAGAAGAG CCCAGGGCGCAAGGAGCCGGCTCTTGAGCGCCCCTCCCAGGAGCACCCCTCCTCAGGCCAGGCT GTGGCAGCGGCCGCCCCCAGCAGCACCTTCTCTGCTCGTGCCAAGCAGACCTACCCGTACTGTG CACTGCCCAGGTCCCGGGCCTCCTCTGAGAGTGAGTTGGATGATGAAGGCCCCTGTGGTGGTGA TGGGGACCCAGGCCTGTTCCCCTTTCCCCTGCCCCGGGGTGGGGCCCAGGCCTCCAGCGAGGAG AGTGAGGAGGAGGGGACATCTGAGGACCTCCACCTCCCCCCTGACTGCCATTATGCAACCCGGC CCCCGCGGCCACAGGCGTTCTGCACCTTTGGGAGCCGGCTGGTGAGTCCAGGATGCTACGTGTT TAGCCGCCGGCTGGACCGGTTCTGCTCAGCACTGAGCTCCATGCTGGAGCGGCACCTCAGCTCT CACATGTGGAAGAAGATCCCACCGGCAGCGGAACCTCCATCCCACCCTGTCAGCTCCCCACTCT CTGCTCCCCTGAGCCCATCCTCTACGGGCAGCTGCCCCCGCCTCCCAGGCCCACCCCCCAGACC TGCCTGCCCAGCCTCCACGTCCCCCGCCAAGGACAGCCTGGTCCCCAGCTACCCTGCCGGCTCC CCCAGTGTGGCAGCCGCCTGCAGCCAGGCAGAGTGCACGGGCGGGAGCCAGGCCATCACCTCAC CACTGCCTGCCAACACGCCGTCCCCATCCTTCAGCAAACTCCCACCATCGAAGGCTAGCAAGTC ATCCAAAGGCAAGGACGGGCCCGAGGCGGAGGCCCCTTCTCGAAAGCGAAAGTTATCCCCAGGC CCCACCACTTTCAAACGGACCTGCATCCTGGAGCCCTCTGGCAAAGGCAAACCCTCCGGCTGCC GAGGCCTCTCGGCCAAGACTAAAACAGCCCTGGGCGTGGGGCTTAATGGGACGGTGGGGCCAAG AGTGAAGCGGGCAGGGCCGCTGGACTGTCGGGCTTCCCCTCATCAGGCCCCTGCACCCGTCAAG GCTTCTCAGCTGGACAACCGGGGAGCGGCTGGACACCCAGCCAAGGCCCTGCCAACCAATTGCC TCTCTGAGGAGGAGGTAGCCAAGAAGCGGAAAAACCTGGCCACTTACTGCCGGCCGGTGAAGGC CAAGCACTGCCAGGCCGGCACCCCTGCCGATGCGGCCTGCCCCGTGCGCCGCAAGAAGCCGGGT CCTGCCGTGGCCTTTGAGGAGAAGTGTTCCACACTGAAGTCTAAAGCCCATTAACAAGAAAGTG CCTGCCCACTGCGATGGAGCCGCCAGCACCTCCTCCCCTCCAGATCCGGGCCCCAGGCTGCTGC CGCTTTTTATAACTTTATATTATTTTTTTTAAGAAAAAAAACTCTTTAAAATACCTCAA
hide sequence
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RefSeq Acc Id: |
XM_038479798 ⟹ XP_038335726 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UMICH_Zoey_3.1 | 6 | 42,430,354 - 42,439,264 (-) | NCBI |
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RefSeq Acc Id: |
XM_038541072 ⟹ XP_038397000 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UU_Cfam_GSD_1.0 | 6 | 42,823,209 - 42,832,120 (-) | NCBI |
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RefSeq Acc Id: |
XM_038541073 ⟹ XP_038397001 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UU_Cfam_GSD_1.0 | 6 | 42,823,214 - 42,832,120 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038541074 ⟹ XP_038397002 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UU_Cfam_GSD_1.0 | 6 | 42,823,201 - 42,832,120 (-) | NCBI |
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RefSeq Acc Id: |
XM_038541075 ⟹ XP_038397003 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UU_Cfam_GSD_1.0 | 6 | 42,823,209 - 42,831,799 (-) | NCBI |
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RefSeq Acc Id: |
XM_038541076 ⟹ XP_038397004 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UU_Cfam_GSD_1.0 | 6 | 42,823,209 - 42,830,012 (-) | NCBI |
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RefSeq Acc Id: |
XM_038552377 ⟹ XP_038408305 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
Dog10K_Boxer_Tasha | 6 | 45,141,839 - 45,150,754 (-) | NCBI |
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RefSeq Acc Id: |
XM_038552388 ⟹ XP_038408316 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
Dog10K_Boxer_Tasha | 6 | 45,141,847 - 45,150,433 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038552391 ⟹ XP_038408319 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
Dog10K_Boxer_Tasha | 6 | 45,141,847 - 45,148,647 (-) | NCBI |
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RefSeq Acc Id: |
XM_038605215 ⟹ XP_038461143 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UNSW_CanFamBas_1.0 | 6 | 42,388,218 - 42,397,127 (-) | NCBI |
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RefSeq Acc Id: |
XM_038605216 ⟹ XP_038461144 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UNSW_CanFamBas_1.0 | 6 | 42,388,223 - 42,397,127 (-) | NCBI |
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RefSeq Acc Id: |
XM_038605217 ⟹ XP_038461145 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UNSW_CanFamBas_1.0 | 6 | 42,388,210 - 42,397,127 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038605218 ⟹ XP_038461146 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UNSW_CanFamBas_1.0 | 6 | 42,388,218 - 42,396,807 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038605219 ⟹ XP_038461147 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UNSW_CanFamBas_1.0 | 6 | 42,388,218 - 42,395,020 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038669877 ⟹ XP_038525805 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
ROS_Cfam_1.0 | 6 | 42,697,567 - 42,706,476 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038669878 ⟹ XP_038525806 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
ROS_Cfam_1.0 | 6 | 42,697,572 - 42,706,476 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038669879 ⟹ XP_038525807 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
ROS_Cfam_1.0 | 6 | 42,697,559 - 42,706,476 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038669880 ⟹ XP_038525808 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
ROS_Cfam_1.0 | 6 | 42,697,567 - 42,706,155 (-) | NCBI |
|
RefSeq Acc Id: |
XM_038669881 ⟹ XP_038525809 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
ROS_Cfam_1.0 | 6 | 42,697,567 - 42,704,369 (-) | NCBI |
|
RefSeq Acc Id: |
XP_005621879 ⟸ XM_005621822 |
- Peptide Label: |
isoform X2 |
- UniProtKB: |
A0A8C0KAE1 (UniProtKB/TrEMBL), A0A8C0RJ88 (UniProtKB/TrEMBL), A0A8I3MNG0 (UniProtKB/TrEMBL), A0A8C0N708 (UniProtKB/TrEMBL) |
- Sequence: |
MAVRERAAAAMAALERRVPSLDDFAGQSWSSWVERADLPAADGAELEESNKNTKKLDAMTLIKE DMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYARAPPPPPAPASSQKCHV VNGQGPACRAPGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGI RVAPPSAFLSQPGGLTKDSPGKTPMAPPSKEPPGRESIEMTPSEGPSHRAEGSPPEKEPGGARL THKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKAN SRKGESPKEKSPGRKEPALERPSQEHPSSGQAVAAAAPSSTFSARAKQTYPYCALPRSRASSES ELDDEGPCGGDGDPGLFPFPLPRGGAQASSEESEEEGTSEDLHLPPDCHYATRPPRPQAFCTFG SRLVSPGCYVFSRRLDRFCSALSSMLERHLSSHMWKKIPPAAEPPSHPVSSPLSAPLSPSSTGS CPRLPGPPPRPACPASTSPAKDSLVPSYPAGSPSVAAACSQAECTGGSQAITSPLPANTPSPSF SKLPPSKASKSSKGKDGPEAEAPSRKRKLSPGPTTFKRTCILEPSGKGKPSGCRGLSAKTKTAL GVGLNGTVGPRVKRAGPLDCRASPHQAPAPVKASQLDNRGAAGHPAKALPTNCLSEEEVAKKRK NLATYCRPVKAKHCQAGTPADAACPVRRKKPGPAVAFEEKCSTLKSKAH
hide sequence
|
RefSeq Acc Id: |
XP_005621878 ⟸ XM_005621821 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A8I3MUI3 (UniProtKB/TrEMBL), A0A8P0SNZ3 (UniProtKB/TrEMBL), A0A8C0N930 (UniProtKB/TrEMBL) |
- Sequence: |
MAVRERAAAAMAALERRVPSLDDFAGQSWSSWVERADLPAADGAELEESNKNTKKLDAMTLIKE DMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYARAPPPPPAPASSQKCHV VNGQGPACRAPGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGI RVAPPSAFLSQPGGLTKDSPGKTPMAPPSKEPPGRESIEMTPSEGPSHRAEGSPPEKEPGGARL THKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKAN SRKGESPKEKSPGRKEPALERPSQEHPSSGQAVAAAAPSSTFSARAKQTYPYCALPRSRASSES ELDDEGPCGGDGDPGLFPFPLPRGGAQASSEESEEEGTSEDLHLPPDCHYATRPPRPQAFCTFG SRLVSPGCYVFSRRLDRFCSALSSMLERHLSSHMWKKIPPAAEPPSHPVSSPLSAPLSPSSTGS CPRLPGPPPRPACPASTSPAKDSLVPSYPAGSPSVAAACSQAECTGGSQAITSPLPANTPSPSF SKLPPSKASKSSKGKDGPEAEAPSRKRKLSPGPTTFKRTCILEPSGKGKPSGCRGLSAKTKTAL GVGLNGTVGPRVKRAGPLDCRASPHQAPAPVKASQLDNRGAAGHPAKALPTNCLSEEEVAKKRK NLATYCRPVKAKHCQAGTPADAACPVRRKKPGPAVAFEEKCSTLKELELPLSPKERKLDFMNSD GKV
hide sequence
|
Ensembl Acc Id: |
ENSCAFP00000030550 ⟸ ENSCAFT00000035305 |
Ensembl Acc Id: |
ENSCAFP00000047273 ⟸ ENSCAFT00000077698 |
Ensembl Acc Id: |
ENSCAFP00000029364 ⟸ ENSCAFT00000031543 |
RefSeq Acc Id: |
XP_038335726 ⟸ XM_038479798 |
- Peptide Label: |
isoform X1 |
RefSeq Acc Id: |
XP_038461145 ⟸ XM_038605217 |
- Peptide Label: |
isoform X3 |
RefSeq Acc Id: |
XP_038461143 ⟸ XM_038605215 |
- Peptide Label: |
isoform X1 |
RefSeq Acc Id: |
XP_038461146 ⟸ XM_038605218 |
- Peptide Label: |
isoform X4 |
RefSeq Acc Id: |
XP_038461147 ⟸ XM_038605219 |
- Peptide Label: |
isoform X5 |
RefSeq Acc Id: |
XP_038461144 ⟸ XM_038605216 |
- Peptide Label: |
isoform X2 |
RefSeq Acc Id: |
XP_038525807 ⟸ XM_038669879 |
- Peptide Label: |
isoform X3 |
- UniProtKB: |
A0A8C0SQP9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038525805 ⟸ XM_038669877 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A8I3MUI3 (UniProtKB/TrEMBL), A0A8P0SNZ3 (UniProtKB/TrEMBL), A0A8C0N930 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038525808 ⟸ XM_038669880 |
- Peptide Label: |
isoform X4 |
- UniProtKB: |
A0A8C0QY97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038525809 ⟸ XM_038669881 |
- Peptide Label: |
isoform X5 |
- UniProtKB: |
A0A8C0KB39 (UniProtKB/TrEMBL), A0A8C0QY97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038525806 ⟸ XM_038669878 |
- Peptide Label: |
isoform X2 |
- UniProtKB: |
A0A8C0KAE1 (UniProtKB/TrEMBL), A0A8C0RJ88 (UniProtKB/TrEMBL), A0A8I3MNG0 (UniProtKB/TrEMBL), A0A8C0N708 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038408305 ⟸ XM_038552377 |
- Peptide Label: |
isoform X3 |
- UniProtKB: |
A0A8C0SQP9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038408316 ⟸ XM_038552388 |
- Peptide Label: |
isoform X4 |
- UniProtKB: |
A0A8C0QY97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038408319 ⟸ XM_038552391 |
- Peptide Label: |
isoform X5 |
- UniProtKB: |
A0A8C0KB39 (UniProtKB/TrEMBL), A0A8C0QY97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038397002 ⟸ XM_038541074 |
- Peptide Label: |
isoform X3 |
- UniProtKB: |
A0A8C0SQP9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038397000 ⟸ XM_038541072 |
- Peptide Label: |
isoform X1 |
- UniProtKB: |
A0A8C0N930 (UniProtKB/TrEMBL), A0A8I3MUI3 (UniProtKB/TrEMBL), A0A8P0SNZ3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038397003 ⟸ XM_038541075 |
- Peptide Label: |
isoform X4 |
- UniProtKB: |
A0A8C0QY97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038397004 ⟸ XM_038541076 |
- Peptide Label: |
isoform X5 |
- UniProtKB: |
A0A8C0KB39 (UniProtKB/TrEMBL), A0A8C0QY97 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038397001 ⟸ XM_038541073 |
- Peptide Label: |
isoform X2 |
- UniProtKB: |
A0A8C0KAE1 (UniProtKB/TrEMBL), A0A8C0N708 (UniProtKB/TrEMBL), A0A8C0RJ88 (UniProtKB/TrEMBL), A0A8I3MNG0 (UniProtKB/TrEMBL) |
Ensembl Acc Id: |
ENSCAFP00845004067 ⟸ ENSCAFT00845005112 |
Ensembl Acc Id: |
ENSCAFP00845004088 ⟸ ENSCAFT00845005139 |
Ensembl Acc Id: |
ENSCAFP00845004089 ⟸ ENSCAFT00845005147 |
Additional Information
External Database Links
Database |
Acc Id |
Source(s) |
Ensembl Genes |
ENSCAFG00000019829 |
Ensembl, UniProtKB/TrEMBL |
|
ENSCAFG00030013038 |
UniProtKB/TrEMBL |
|
ENSCAFG00040015813 |
UniProtKB/TrEMBL |
|
ENSCAFG00845002885 |
Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript |
ENSCAFT00000031543.5 |
UniProtKB/TrEMBL |
|
ENSCAFT00000035305.5 |
UniProtKB/TrEMBL |
|
ENSCAFT00000077698.2 |
UniProtKB/TrEMBL |
|
ENSCAFT00030024212.1 |
UniProtKB/TrEMBL |
|
ENSCAFT00030024335.1 |
UniProtKB/TrEMBL |
|
ENSCAFT00030024418.1 |
UniProtKB/TrEMBL |
|
ENSCAFT00040029164.1 |
UniProtKB/TrEMBL |
|
ENSCAFT00845005112 |
ENTREZGENE |
|
ENSCAFT00845005112.1 |
UniProtKB/TrEMBL |
|
ENSCAFT00845005139.1 |
UniProtKB/TrEMBL |
|
ENSCAFT00845005147 |
ENTREZGENE |
|
ENSCAFT00845005147.1 |
UniProtKB/TrEMBL |
Gene3D-CATH |
6.10.140.1270 |
UniProtKB/TrEMBL |
InterPro |
Ataxin-7-like_regulator |
UniProtKB/TrEMBL |
|
SCA7_dom |
UniProtKB/TrEMBL |
KEGG Report |
cfa:490121 |
UniProtKB/TrEMBL |
NCBI Gene |
ATXN7L2 |
ENTREZGENE |
PANTHER |
ATAXIN 7 RELATED |
UniProtKB/TrEMBL |
|
ATAXIN-7-LIKE PROTEIN 2 |
UniProtKB/TrEMBL |
Pfam |
SCA7 |
UniProtKB/TrEMBL |
PROSITE |
SCA7 |
UniProtKB/TrEMBL |
UniProt |
A0A8C0KAE1 |
ENTREZGENE |
|
A0A8C0KB39 |
ENTREZGENE |
|
A0A8C0N708 |
ENTREZGENE, UniProtKB/TrEMBL |
|
A0A8C0N930 |
ENTREZGENE, UniProtKB/TrEMBL |
|
A0A8C0QY97 |
ENTREZGENE |
|
A0A8C0RJ88 |
ENTREZGENE, UniProtKB/TrEMBL |
|
A0A8C0SQP9 |
ENTREZGENE, UniProtKB/TrEMBL |
|
A0A8I3MNG0 |
ENTREZGENE, UniProtKB/TrEMBL |
|
A0A8I3MUI3 |
ENTREZGENE, UniProtKB/TrEMBL |
|
A0A8I3RR06_CANLF |
UniProtKB/TrEMBL |
|
A0A8P0NXD7_CANLF |
UniProtKB/TrEMBL |
|
A0A8P0SNZ3 |
ENTREZGENE, UniProtKB/TrEMBL |
VGNC ID |
VGNC:38305 |
ENTREZGENE |
|
|