THAP5 (THAP domain containing 5) - Rat Genome Database

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Gene: THAP5 (THAP domain containing 5) Canis lupus familiaris
Analyze
Symbol: THAP5
Name: THAP domain containing 5
RGD ID: 12134939
Description: ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: THAP domain-containing protein 5
RGD Orthologs
Human
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11448,738,882 - 48,880,295 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1448,873,990 - 48,880,266 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1448,183,037 - 48,324,132 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01448,681,884 - 48,829,752 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1448,822,741 - 48,829,735 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11448,786,690 - 48,926,847 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01448,466,945 - 48,610,709 (-)NCBIUNSW_CanFamBas_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
THAP5Dogpleomorphic xanthoastrocytoma  ISORGD:13532748554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
THAP5Dognegative regulation of cell cycle involved_inISORGD:13532749068941 PMID:19502560UniProtPMID:19502560
THAP5Dognegative regulation of transcription by RNA polymerase II involved_inISORGD:13532749068941 PMID:21110952ARUK-UCLPMID:21110952

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
THAP5Dogchromatin located_inISORGD:13532749068941 PMID:21110952ARUK-UCLPMID:21110952
THAP5Dognucleoplasm located_inISORGD:13532749068941 HPAGO_REF:0000052
THAP5Dognucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
THAP5Dognucleus is_active_inIBAPANTHER:PTN002930720|UniProtKB:Q7Z6K1150520179 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
THAP5DogDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
THAP5DogDNA binding enablesIEAUniRule:UR000415608150520179 UniProtGO_REF:0000104
THAP5Dogmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
THAP5Dogprotease binding enablesISOUniProtKB:O434649068941 PMID:19502560UniProtPMID:19502560
THAP5Dogzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043



THAP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11448,738,882 - 48,880,295 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1448,873,990 - 48,880,266 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1448,183,037 - 48,324,132 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01448,681,884 - 48,829,752 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1448,822,741 - 48,829,735 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11448,786,690 - 48,926,847 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01448,466,945 - 48,610,709 (-)NCBIUNSW_CanFamBas_1.0
THAP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387108,541,759 - 108,569,768 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7108,554,543 - 108,569,750 (-)EnsemblGRCh38hg38GRCh38
GRCh377108,202,576 - 108,210,212 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367107,991,766 - 107,997,133 (-)NCBINCBI36Build 36hg18NCBI36
Build 347107,798,482 - 107,803,848NCBI
Celera7103,016,042 - 103,023,538 (-)NCBICelera
Cytogenetic Map7q31.1NCBI
HuRef7102,570,894 - 102,578,384 (-)NCBIHuRef
CHM1_17108,135,971 - 108,143,453 (-)NCBICHM1_1
T2T-CHM13v2.07109,865,676 - 109,894,376 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27107,569,889 - 107,577,381 (-)NCBI
Thap5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541012,808,700 - 12,815,193 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541012,808,700 - 12,814,915 (-)NCBIChiLan1.0ChiLan1.0
THAP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26145,412,123 - 145,419,606 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17193,682,093 - 193,689,576 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07100,547,874 - 100,555,416 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17113,266,499 - 113,274,038 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7113,266,499 - 113,274,033 (-)Ensemblpanpan1.1panPan2
Thap5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511868,395,316 - 68,402,923 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366531,544,613 - 1,554,216 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366531,546,682 - 1,554,347 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
THAP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1836,584,373 - 36,592,252 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11836,584,359 - 36,592,255 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21840,224,757 - 40,232,666 (+)NCBISscrofa10.2Sscrofa10.2susScr3
THAP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12177,469,566 - 77,477,190 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2177,471,631 - 77,477,733 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604226,386,093 - 26,393,350 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Thap5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473921,193,484 - 21,199,103 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473921,193,399 - 21,220,936 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in THAP5
1808 total Variants

1 to 10 of 272 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 19q13.33-13.43(chr19:49907832-58557889)x3 copy number gain See cases [RCV000052925] Chr19:49907832..58557889 [GRCh38]
Chr19:50411089..59069256 [GRCh37]
Chr19:55102901..63761068 [NCBI36]
Chr19:19q13.33-13.43
pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47908540-58539965)x3 copy number gain See cases [RCV000052914] Chr19:47908540..58539965 [GRCh38]
Chr19:48411797..59051332 [GRCh37]
Chr19:53103609..63743144 [NCBI36]
Chr19:19q13.33-13.43
pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47929575-58572206)x3 copy number gain See cases [RCV000052915] Chr19:47929575..58572206 [GRCh38]
Chr19:48432832..59083573 [GRCh37]
Chr19:53124644..63775385 [NCBI36]
Chr19:19q13.33-13.43
pathogenic
NM_016553.5(NUP62):c.848G>C (p.Ser283Thr) single nucleotide variant Infantile bilateral striatal necrosis [RCV001787922]|NUP62-related disorder [RCV003975031]|not provided [RCV001514104]|not specified [RCV000117866] Chr19:49908960 [GRCh38]
Chr19:50412217 [GRCh37]
Chr19:19q13.33
benign|likely benign
NM_001193646.1(ATF5):c.440C>T (p.Ser147Phe) single nucleotide variant Malignant melanoma [RCV000063600] Chr19:49932683 [GRCh38]
Chr19:50435940 [GRCh37]
Chr19:55127752 [NCBI36]
Chr19:19q13.33
not provided
NM_016553.5(NUP62):c.1172A>C (p.Gln391Pro) single nucleotide variant Infantile bilateral striatal necrosis [RCV000005018] Chr19:49908636 [GRCh38]
Chr19:50411893 [GRCh37]
Chr19:19q13.33
pathogenic
NM_001193646.1(ATF5):c.807C>T (p.Ile269=) single nucleotide variant Malignant melanoma [RCV000063601] Chr19:49933050 [GRCh38]
Chr19:50436307 [GRCh37]
Chr19:55128119 [NCBI36]
Chr19:19q13.33
not provided
NM_016553.5(NUP62):c.648C>T (p.Ser216=) single nucleotide variant Infantile bilateral striatal necrosis [RCV001787921]|not provided [RCV001519352]|not specified [RCV000117865] Chr19:49909160 [GRCh38]
Chr19:50412417 [GRCh37]
Chr19:19q13.33
benign|likely benign
NM_016553.5(NUP62):c.1323T>C (p.Asp441=) single nucleotide variant Infantile bilateral striatal necrosis [RCV001787920]|not provided [RCV001519351]|not specified [RCV000117863] Chr19:49908485 [GRCh38]
Chr19:50411742 [GRCh37]
Chr19:19q13.33
benign|likely benign
NM_016553.5(NUP62):c.549G>A (p.Thr183=) single nucleotide variant NUP62-related disorder [RCV003915156]|not provided [RCV001521717]|not specified [RCV000117864] Chr19:49909259 [GRCh38]
Chr19:50412516 [GRCh37]
Chr19:19q13.33
benign|likely benign
1 to 10 of 272 rows



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10


1 to 30 of 52 rows
RefSeq Transcripts XM_005628731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005628733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022427583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038621296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 52 rows

Ensembl Acc Id: ENSCAFT00000005270   ⟹   ENSCAFP00000032124
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1448,873,990 - 48,880,266 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845052860   ⟹   ENSCAFP00845041503
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1448,822,741 - 48,829,735 (-)Ensembl
RefSeq Acc Id: XM_005628731   ⟹   XP_005628788
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,873,299 - 48,879,845 (-)NCBI
Dog10K_Boxer_Tasha1448,317,131 - 48,323,662 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005628732   ⟹   XP_005628789
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,797,689 - 48,880,293 (-)NCBI
Dog10K_Boxer_Tasha1448,241,611 - 48,324,131 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005628733   ⟹   XP_005628790
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,802,568 - 48,880,293 (-)NCBI
Dog10K_Boxer_Tasha1448,246,637 - 48,324,130 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427579   ⟹   XP_022283287
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,873,299 - 48,880,070 (-)NCBI
Dog10K_Boxer_Tasha1448,317,131 - 48,324,089 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427580   ⟹   XP_022283288
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,873,299 - 48,879,810 (-)NCBI
Dog10K_Boxer_Tasha1448,317,131 - 48,323,635 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427581   ⟹   XP_022283289
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,873,299 - 48,879,681 (-)NCBI
Dog10K_Boxer_Tasha1448,317,131 - 48,323,415 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427582   ⟹   XP_022283290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,873,299 - 48,876,562 (-)NCBI
Dog10K_Boxer_Tasha1448,317,131 - 48,320,368 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022427583   ⟹   XP_022283291
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,831,121 - 48,880,293 (-)NCBI
Dog10K_Boxer_Tasha1448,275,029 - 48,324,131 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038445056   ⟹   XP_038300984
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1448,317,131 - 48,323,608 (-)NCBI
RefSeq Acc Id: XM_038445112   ⟹   XP_038301040
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1448,219,639 - 48,324,130 (-)NCBI
RefSeq Acc Id: XM_038495074   ⟹   XP_038351002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,926,837 (-)NCBI
RefSeq Acc Id: XM_038495075   ⟹   XP_038351003
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,926,804 (-)NCBI
RefSeq Acc Id: XM_038495076   ⟹   XP_038351004
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,926,259 (-)NCBI
RefSeq Acc Id: XM_038495077   ⟹   XP_038351005
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,926,324 (-)NCBI
RefSeq Acc Id: XM_038495078   ⟹   XP_038351006
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,926,383 (-)NCBI
RefSeq Acc Id: XM_038495079   ⟹   XP_038351007
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,926,114 (-)NCBI
RefSeq Acc Id: XM_038495080   ⟹   XP_038351008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,919,832 - 48,923,067 (-)NCBI
RefSeq Acc Id: XM_038495081   ⟹   XP_038351009
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,874,589 - 48,926,846 (-)NCBI
RefSeq Acc Id: XM_038495082   ⟹   XP_038351010
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,841,162 - 48,926,846 (-)NCBI
RefSeq Acc Id: XM_038495083   ⟹   XP_038351011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,846,046 - 48,926,845 (-)NCBI
RefSeq Acc Id: XM_038495084   ⟹   XP_038351012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,819,192 - 48,926,845 (-)NCBI
RefSeq Acc Id: XM_038621288   ⟹   XP_038477216
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,610,699 (-)NCBI
RefSeq Acc Id: XM_038621289   ⟹   XP_038477217
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,610,666 (-)NCBI
RefSeq Acc Id: XM_038621290   ⟹   XP_038477218
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,610,137 (-)NCBI
RefSeq Acc Id: XM_038621291   ⟹   XP_038477219
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,610,192 (-)NCBI
RefSeq Acc Id: XM_038621292   ⟹   XP_038477220
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,610,251 (-)NCBI
RefSeq Acc Id: XM_038621293   ⟹   XP_038477221
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,609,993 (-)NCBI
RefSeq Acc Id: XM_038621294   ⟹   XP_038477222
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,603,709 - 48,606,946 (-)NCBI
RefSeq Acc Id: XM_038621295   ⟹   XP_038477223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,558,561 - 48,610,708 (-)NCBI
RefSeq Acc Id: XM_038621296   ⟹   XP_038477224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,525,862 - 48,610,708 (-)NCBI
RefSeq Acc Id: XM_038621297   ⟹   XP_038477225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,530,153 - 48,610,707 (-)NCBI
RefSeq Acc Id: XM_038621298   ⟹   XP_038477226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,502,734 - 48,610,707 (-)NCBI
RefSeq Acc Id: XM_038686973   ⟹   XP_038542901
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,829,742 (-)NCBI
RefSeq Acc Id: XM_038686974   ⟹   XP_038542902
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,829,709 (-)NCBI
RefSeq Acc Id: XM_038686975   ⟹   XP_038542903
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,829,253 (-)NCBI
RefSeq Acc Id: XM_038686976   ⟹   XP_038542904
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,829,226 (-)NCBI
RefSeq Acc Id: XM_038686977   ⟹   XP_038542905
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,829,280 (-)NCBI
RefSeq Acc Id: XM_038686978   ⟹   XP_038542906
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,829,033 (-)NCBI
RefSeq Acc Id: XM_038686979   ⟹   XP_038542907
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,822,740 - 48,825,977 (-)NCBI
RefSeq Acc Id: XM_038686980   ⟹   XP_038542908
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,780,539 - 48,829,751 (-)NCBI
RefSeq Acc Id: XM_038686981   ⟹   XP_038542909
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,740,652 - 48,829,751 (-)NCBI
RefSeq Acc Id: XM_038686982   ⟹   XP_038542910
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,745,669 - 48,829,750 (-)NCBI
RefSeq Acc Id: XM_038686983   ⟹   XP_038542911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,717,539 - 48,829,750 (-)NCBI
RefSeq Acc Id: XM_539521   ⟹   XP_539521
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,873,299 - 48,880,286 (-)NCBI
Dog10K_Boxer_Tasha1448,317,131 - 48,324,122 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002633103
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,738,882 - 48,880,295 (-)NCBI
Dog10K_Boxer_Tasha1448,183,037 - 48,324,132 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005335964
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11448,786,690 - 48,926,847 (-)NCBI
RefSeq Acc Id: XR_005404023
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01448,466,945 - 48,610,709 (-)NCBI
RefSeq Acc Id: XR_005437474
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01448,681,884 - 48,829,752 (-)NCBI
1 to 30 of 49 rows
Protein RefSeqs XP_005628788 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628789 (Get FASTA)   NCBI Sequence Viewer  
  XP_005628790 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283287 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283288 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283289 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283290 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283291 (Get FASTA)   NCBI Sequence Viewer  
  XP_038300984 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301040 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351002 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351003 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351004 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351005 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351006 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351007 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351008 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351009 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351010 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351011 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351012 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477216 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477217 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477218 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477219 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477220 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477221 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477222 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038477224 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 49 rows
1 to 5 of 46 rows
1 to 5 of 46 rows
RefSeq Acc Id: XP_005628789   ⟸   XM_005628732
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_005628790   ⟸   XM_005628733
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_539521   ⟸   XM_539521
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZQ6 (UniProtKB/TrEMBL),   A0A8I3Q8Q1 (UniProtKB/TrEMBL),   A0A8P0SPS3 (UniProtKB/TrEMBL),   A0A8C0QX27 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005628788   ⟸   XM_005628731
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MDI1 (UniProtKB/TrEMBL),   A0A8C0QX27 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022283291   ⟸   XM_022427583
- Peptide Label: isoform X4
- Sequence:
THAP-type

RGD ID:13685811
Promoter ID:EPDNEW_C3878
Type:initiation region
Name:THAP5_1
Description:THAP domain containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11448,880,255 - 48,880,315EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000003290 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030004961 UniProtKB/TrEMBL
  ENSCAFG00040014311 UniProtKB/TrEMBL
  ENSCAFG00845029849 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000005270.4 UniProtKB/TrEMBL
  ENSCAFT00030009111.1 UniProtKB/TrEMBL
  ENSCAFT00040026381.1 UniProtKB/TrEMBL
  ENSCAFT00845052860 ENTREZGENE
  ENSCAFT00845052860.1 UniProtKB/TrEMBL
InterPro THAP_domain_protein UniProtKB/TrEMBL
  THAP_Znf UniProtKB/TrEMBL
KEGG Report cfa:482404 UniProtKB/TrEMBL
NCBI Gene THAP5 ENTREZGENE
PANTHER AGAP005574-PA UniProtKB/TrEMBL
  THAP DOMAIN-CONTAINING PROTEIN 5 UniProtKB/TrEMBL
Pfam THAP UniProtKB/TrEMBL
PROSITE ZF_THAP UniProtKB/TrEMBL
SMART DM3 UniProtKB/TrEMBL
  THAP UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/TrEMBL
UniProt A0A8C0JZQ6 ENTREZGENE
  A0A8C0MDI1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QX27 ENTREZGENE
  A0A8I3Q8Q1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SPS3 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:47329 ENTREZGENE
1 to 26 of 26 rows