Gene: UBQLNL (ubiquilin like) Canis lupus familiaris |
|
Analyze |
|
Symbol: |
UBQLNL |
Name: |
ubiquilin like |
RGD ID: |
12128631 |
Description: |
|
Type: |
protein-coding
|
RefSeq Status: |
MODEL |
Previously known as: |
ubiquilin-like |
RGD Orthologs |
|
Alliance Orthologs |
|
More Info |
more info ...
|
More Info |
Species |
Gene symbol and name |
Data Source |
Assertion derived from |
less info ...
|
Orthologs 1 |
Homo sapiens (human): |
UBQLNL (ubiquilin like) |
HGNC |
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam |
Mus musculus (house mouse): |
Ubqlnl (ubiquilin-like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Rattus norvegicus (Norway rat): |
Ubqlnl (ubiquilin-like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chinchilla lanigera (long-tailed chinchilla): |
Ubqlnl (ubiquilin like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Pan paniscus (bonobo/pygmy chimpanzee): |
UBQLNL (ubiquilin like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Ictidomys tridecemlineatus (thirteen-lined ground squirrel): |
Ubqlnl (ubiquilin like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Sus scrofa (pig): |
UBQLNL (ubiquilin like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
Chlorocebus sabaeus (green monkey): |
UBQLNL (ubiquilin like) |
Transitive Ortholog Pipeline |
Transitive Ortholog Pipeline |
|
Latest Assembly: |
CanFam3.1 - Dog CanFam3.1 Assembly |
Position: |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 21 | 28,434,847 - 28,437,178 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 28,435,132 - 28,437,178 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 28,213,850 - 28,216,179 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 29,257,541 - 29,259,870 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 21 | 28,573,490 - 28,575,819 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 28,777,733 - 28,780,062 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 28,913,814 - 28,916,143 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
|
References
Additional References at PubMed
Genomics
Comparative Map Data
UBQLNL (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 21 | 28,434,847 - 28,437,178 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 28,435,132 - 28,437,178 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 28,213,850 - 28,216,179 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 29,257,541 - 29,259,870 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 21 | 28,573,490 - 28,575,819 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 28,777,733 - 28,780,062 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 28,913,814 - 28,916,143 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
UBQLNL (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 5,514,393 - 5,516,699 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 5,514,393 - 5,518,431 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 5,535,623 - 5,537,929 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 5,492,199 - 5,494,532 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 5,654,203 - 5,656,536 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | p15.4 | NCBI | | | | | HuRef | 11 | 5,193,428 - 5,195,762 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 5,534,603 - 5,536,936 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 5,573,735 - 5,576,041 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Ubqlnl (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 103,797,466 - 103,799,763 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 103,797,466 - 103,799,763 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 104,148,259 - 104,150,556 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 104,148,259 - 104,150,556 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 111,296,773 - 111,299,070 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 104,022,080 - 104,024,367 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 104,529,424 - 104,531,721 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | E3 | NCBI | | | | | cM Map | 7 | 54.85 | NCBI | | | | |
|
Ubqlnl (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 168,027,056 - 168,029,305 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 158,615,177 - 158,617,426 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 158,615,056 - 158,617,512 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 166,609,032 - 166,611,281 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 173,789,058 - 173,791,307 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 166,675,339 - 166,677,588 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 169,342,005 - 169,344,254 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 169,341,995 - 169,344,306 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 175,489,304 - 175,491,553 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 161,984,944 - 161,987,193 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 162,078,827 - 162,081,077 (-) | NCBI | | | | | Celera | 1 | 156,613,201 - 156,615,450 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32 | NCBI | | | | |
|
Ubqlnl (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955414 | 21,420,864 - 21,422,698 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 21,420,663 - 21,422,968 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
UBQLNL (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 7,963,494 - 7,964,921 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 7,921,196 - 7,922,623 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 5,659,443 - 5,662,642 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 5,342,032 - 5,343,533 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
Ubqlnl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
UBQLNL (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 9 | 4,282,623 - 4,284,908 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 4,282,587 - 4,284,819 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 4,894,899 - 4,897,158 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
UBQLNL (Chlorocebus sabaeus - green monkey) |
|
Expression
RNA-SEQ Expression
Sequence
Ensembl Acc Id: |
ENSCAFT00000045670 ⟹ ENSCAFP00000040806 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
CanFam3.1 Ensembl | 21 | 28,435,132 - 28,437,178 (+) | Ensembl |
|
RefSeq Acc Id: |
XM_003433024 ⟹ XP_003433072 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
CanFam3.1 | 21 | 28,434,847 - 28,437,178 (+) | NCBI | Dog10K_Boxer_Tasha | 21 | 28,213,850 - 28,216,179 (+) | NCBI |
|
Sequence: |
GCCCTGGGTGGAGTCATCTTTACTTAGCCCACCTAGTACCAACTATGAATCAGTAGCCACGACA GGCCTCAGCTAGGCCACATCTGGAGAACTGGGGTGGGGGGTATAACATCATAAAATACCTGGCC CCAGCCTGGTCACTCATCCCTTTCTCAGCAACAAGGAAACTAGCCTTTGGCTTGAGAACACAAC AACTGAGACGGGGGCCAGCAGAAACACTCCTCTGCCCTCACCCCTTCTGCCCCGGTTTCCACCT GCTCACCATCTGCCTTCCCACTGAGGTCCATGCCGCATGTCATCTCTCGAACACCCAAGATGGC CCAGAGTGGGCATTCTTCAGGTATGCCTGCAGACAAGAACATTTCTTCGAGTGTCACCCGAGTG ATAGTGAAGACAGCAGGCAAGCAGGAAGATTTTATGATAGCTGATGACACCTCGGTGAGGCAGT TCAAGGAGAAGCTATCCACCCACTTTAAGTGCCAAATGGACCAATTAGTGTTGGTCTTCATGGG CCGCCTTCTCAAAGACCATGACACACTGAGCCAGAGGGGCATCCTAGATGGCCACACCATTCAC TTGGTCATCAAGTCCAAACGCAGCTCCAGATCCCTAGCACATTCCTCCCGGAACCTGTCGACCA AAGAGCCCTGCCACCAGGTCAGAAACACTGAAGGAAACACCAATGGGGTATACCAACCTGCGGG TGTGAGTCACACCCCATTGGAATCAGCCCTCCTTGTGGAGCCTGATGCTCCCAAAGTGCATTCC CAGGATCTGGAAGTGAGTGGTCCAGAGTACATAGCACAGATGCTACAGAATCCTAGTATCCAGC AGCTTCTATCTAACACAGACCTCGTGAGACAGTTCATCTCAGAACACCCAGACATGCAACAACT GATGCAGCAGAGCCCAGAAGTCTCCTACATCCTTGACAATTCTGACATTCTATGGCAGACTCTG GAGCTGGCCAGAAACCTTGCCATGATTCAAGAGATAATGCAGATCCAGCAACCTGAGCAGATTC TTGAGCATCCACTGAACCCACAGTCACACCTGGGCTTAGAGACATTGCCAGGTGGGGATAATGC CTTGGGTCAGAGTTATGTTGATTGCAATGACCAAATGCTCAACAGTTCACAAGATCTTTTTGGG GGCAACCCTTTCCCAGCTCTCCTGGAAGGACAAGTTTTGCAACAACTTCAGTCCTCGCCTCCAT CTCCACCACCACCCCAGGAACGGCAGGACCAGCTTCCACAGCTCCCTACAACCCGAGTCATCTA TACTAGTTCTCATGGTTTATCCTCCATCACCTCGGCCAGTGTTACCCCCAACAAGGTGAACCAT ACTCCCAGTACCCATACCACCACTATCTCCACCAAGGGCCCGAGTCCTACCTGTCCCATTCAGC AGCCGGCTAGGGTACCAGCCTTACCCAGCATAGAGCTCACTCAGCAGCCCCAGACAGAGGACAT AGATGCCACCATCTCTCTAGATAGCTCTGACCAGAAATTAGAGGATGACCTCCAGCCTTCAGAT GAGCAGACCAAATCCCAAATCACCGGAAGTATGATGCAGTTGCTTTTGAACAACCCGTACTTGG CAGCCCAGATGATGTTGTTCATAAGTATGCCCCAGCTGAGTGAACAGTATAGGCAGCAGCTGCC CACATTCCTACAGCAGACACAGCTTTCCGACATGCTTATAGCCCTAGCCAACCCTAAAGCATCA CAAGCAATATTACAGATCGAACAAGGTCTGCAACTCTTAGCCACAGAAGCTCCTGTTCTTCTAC CCTGGGTTGCACCCTACCTTTGGGGCCTGGGTTGGCTTCCTGCACCCAGCTGTAGCCACCCTGA TACAGTGCCCTGGGCCTGGGATGTGCCAGATATTGCTGAACCCAAAGGTCCTGAATGCTGCCAC AAATCTGGAACAGGCCTGCAGAGTCTACAGTCCTTAGCTGGAGACCCTTCTCATCTTCTGCAAG CCCCTGAGATTCGTTTCAGCCAGCAAATGGAATCTCTTCAGGCCATGGGATTTGGGAACCACCA TGCCAATCTGCAAGCACTCATTGCTACTGAGGGGGACACCAGCGCTGCTATTCGCAAGCTCAAG AGATCCCATGGATTCTAACCACCATGCCTACTTTTTTGCTTGTTACCTGCCTGATGATCCATTT GACCACATCATCTCTCTCTTCTACCTCTTCTGCTGCTTCCAACCAGGAAAGGCCCTGGAACAGG AGAAACCAAACAATGCTTTCTTCACTGAAGAATAGACCATTGGCCATGGGTAGAAGATCTGTCA ATAAAATGGCTACTCCCACATACCCCCA
hide sequence
|
RefSeq Acc Id: |
XM_038429589 ⟹ XP_038285517 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
ROS_Cfam_1.0 | 21 | 29,257,541 - 29,259,870 (+) | NCBI |
|
RefSeq Acc Id: |
XM_038505658 ⟹ XP_038361586 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UMICH_Zoey_3.1 | 21 | 28,573,490 - 28,575,819 (+) | NCBI |
|
RefSeq Acc Id: |
XM_038568852 ⟹ XP_038424780 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UU_Cfam_GSD_1.0 | 21 | 28,913,814 - 28,916,143 (+) | NCBI |
|
RefSeq Acc Id: |
XM_038632270 ⟹ XP_038488198 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
---|
UNSW_CanFamBas_1.0 | 21 | 28,777,733 - 28,780,062 (+) | NCBI |
|
RefSeq Acc Id: |
XP_003433072 ⟸ XM_003433024 |
- UniProtKB: |
A0A8C0N3W0 (UniProtKB/TrEMBL), A0A8C0K7S0 (UniProtKB/TrEMBL) |
- Sequence: |
MPHVISRTPKMAQSGHSSGMPADKNISSSVTRVIVKTAGKQEDFMIADDTSVRQFKEKLSTHFK CQMDQLVLVFMGRLLKDHDTLSQRGILDGHTIHLVIKSKRSSRSLAHSSRNLSTKEPCHQVRNT EGNTNGVYQPAGVSHTPLESALLVEPDAPKVHSQDLEVSGPEYIAQMLQNPSIQQLLSNTDLVR QFISEHPDMQQLMQQSPEVSYILDNSDILWQTLELARNLAMIQEIMQIQQPEQILEHPLNPQSH LGLETLPGGDNALGQSYVDCNDQMLNSSQDLFGGNPFPALLEGQVLQQLQSSPPSPPPPQERQD QLPQLPTTRVIYTSSHGLSSITSASVTPNKVNHTPSTHTTTISTKGPSPTCPIQQPARVPALPS IELTQQPQTEDIDATISLDSSDQKLEDDLQPSDEQTKSQITGSMMQLLLNNPYLAAQMMLFISM PQLSEQYRQQLPTFLQQTQLSDMLIALANPKASQAILQIEQGLQLLATEAPVLLPWVAPYLWGL GWLPAPSCSHPDTVPWAWDVPDIAEPKGPECCHKSGTGLQSLQSLAGDPSHLLQAPEIRFSQQM ESLQAMGFGNHHANLQALIATEGDTSAAIRKLKRSHGF
hide sequence
|
Ensembl Acc Id: |
ENSCAFP00000040806 ⟸ ENSCAFT00000045670 |
RefSeq Acc Id: |
XP_038361586 ⟸ XM_038505658 |
RefSeq Acc Id: |
XP_038488198 ⟸ XM_038632270 |
RefSeq Acc Id: |
XP_038285517 ⟸ XM_038429589 |
- UniProtKB: |
A0A8C0K7S0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038424780 ⟸ XM_038568852 |
- UniProtKB: |
A0A8C0K7S0 (UniProtKB/TrEMBL) |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2017-06-20 |
UBQLNL |
ubiquilin like |
|
ubiquilin-like |
Symbol and/or name change |
5135510 |
APPROVED |
|
|