UIMC1 (ubiquitin interaction motif containing 1)

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Gene: UIMC1 (ubiquitin interaction motif containing 1) Canis lupus familiaris

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Symbol:

UIMC1

Name:

ubiquitin interaction motif containing 1

RGD ID:

12090730

Description:

ENCODES a protein that exhibits nuclear retinoid X receptor binding (ortholog); INVOLVED IN chromatin organization (inferred); DNA repair (inferred); DNA repair-dependent chromatin remodeling (inferred); ASSOCIATED WITH Chromosome 5, Trisomy 5q (ortholog); Ehlers-Danlos syndrome dermatosparaxis type (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); FOUND IN site of double-strand break (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

BRCA1-A complex subunit RAP80

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	36,339,711 - 36,467,035 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	36,354,922 - 36,466,880 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	36,306,323 - 36,433,335 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	36,704,960 - 36,832,383 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	36,705,034 - 36,832,347 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	36,531,498 - 36,658,474 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	36,719,094 - 36,846,322 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	37,226,943 - 37,354,416 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chromosome 5, Trisomy 5q (ISO)

Ehlers-Danlos syndrome dermatosparaxis type (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 2 (ISO)

intellectual disability (ISO)

Marfanoid Mental Retardation Syndrome, Autosomal (ISO)

Sotos syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin organization (IEA)

DNA repair (IEA)

DNA repair-dependent chromatin remodeling (IEA)

double-strand break repair (IEA)

mitotic G2 DNA damage checkpoint signaling (IEA)

negative regulation of DNA-templated transcription (IEA)

positive regulation of DNA repair (IEA)

response to ionizing radiation (IEA)

Cellular Component

BRCA1-A complex (IEA)

nuclear body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

site of double-strand break (IEA,ISO)

Molecular Function

DNA binding (IEA)

histone binding (IEA)

K63-linked polyubiquitin modification-dependent protein binding (IEA)

metal ion binding (IEA)

nuclear retinoid X receptor binding (ISO)

protein binding (ISO)

ubiquitin-modified histone reader activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

UIMC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	36,339,711 - 36,467,035 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	36,354,922 - 36,466,880 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	36,306,323 - 36,433,335 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	36,704,960 - 36,832,383 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	36,705,034 - 36,832,347 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	36,531,498 - 36,658,474 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	36,719,094 - 36,846,322 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	37,226,943 - 37,354,416 (+)	NCBI		UU_Cfam_GSD_1.0

UIMC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	176,905,005 - 177,022,602 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	176,905,005 - 177,022,633 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	176,332,006 - 176,433,795 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	176,264,612 - 176,366,049 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	172,067,890 - 172,170,216 (+)	NCBI		Celera
Cytogenetic Map	5	q35.2	NCBI
HuRef	5	171,254,718 - 171,355,942 (-)	NCBI		HuRef
CHM1_1	5	175,764,210 - 175,866,189 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	177,450,819 - 177,566,146 (-)	NCBI		T2T-CHM13v2.0

Uimc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	55,175,693 - 55,248,176 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	55,175,693 - 55,248,113 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	55,027,880 - 55,100,363 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	55,027,880 - 55,100,300 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	55,129,241 - 55,201,656 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	55,037,502 - 55,109,917 (-)	NCBI		MGSCv36	mm8
Celera	13	56,088,803 - 56,161,302 (-)	NCBI		Celera
Cytogenetic Map	13	B1	NCBI
cM Map	13	29.8	NCBI

Uimc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	9,528,923 - 9,597,967 (+)	NCBI		GRCr8
mRatBN7.2	17	9,523,793 - 9,592,810 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	9,527,794 - 9,592,799 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	9,545,179 - 9,610,171 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	11,074,182 - 11,139,282 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	9,541,582 - 9,606,574 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	10,061,915 - 10,130,921 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	10,065,947 - 10,130,907 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	12,169,049 - 12,239,764 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	15,579,709 - 15,644,888 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	15,579,708 - 15,644,885 (+)	NCBI
Celera	17	9,605,684 - 9,670,784 (+)	NCBI		Celera
Cytogenetic Map	17	p14	NCBI

Uimc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	29,154,629 - 29,274,856 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	29,154,373 - 29,274,817 (-)	NCBI	ChiLan1.0	ChiLan1.0

UIMC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	171,988,343 - 172,104,166 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	170,127,854 - 170,243,705 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	172,205,958 - 172,321,758 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	179,272,208 - 179,390,215 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	179,271,577 - 179,374,229 (-)	Ensembl	panpan1.1		panPan2

Uimc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	122,118,891 - 122,235,431 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936597	1,143,835 - 1,260,339 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UIMC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	80,929,267 - 81,036,448 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	80,895,631 - 81,040,712 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	82,633,416 - 82,643,935 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	2	82,469,138 - 82,571,850 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UIMC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	78,912,434 - 79,010,695 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	78,911,234 - 79,010,264 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666075	10,074,575 - 10,173,415 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Uimc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	13,096,286 - 13,242,372 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	13,096,572 - 13,240,685 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in UIMC1
1226 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022417669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038473609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038494098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038534683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663288	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038663291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_848945	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000026215 ⟹ ENSCAFP00000024343

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	36,354,922 - 36,466,880 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075164 ⟹ ENSCAFP00000046894

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	36,410,064 - 36,466,880 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000093929 ⟹ ENSCAFP00000043491

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	36,354,922 - 36,466,880 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845020292 ⟹ ENSCAFP00845015903

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	36,705,034 - 36,832,347 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845020307 ⟹ ENSCAFP00845015917

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	36,705,034 - 36,832,347 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845020367 ⟹ ENSCAFP00845015965

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	36,775,104 - 36,832,347 (+)	Ensembl

RefSeq Acc Id:

XM_022417669 ⟹ XP_022273377

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	36,354,922 - 36,467,035 (+)	NCBI
Dog10K_Boxer_Tasha	4	36,321,496 - 36,433,335 (+)	NCBI

Sequence:

show sequence

ACAAAAGAATGCCACGGAGAAAGAAAAAAGTTAAAGAAGCCTCTGAAGCTCAGAATCTGGAGAA
GAAAGATGCAGAAACTGCCAGTTCTGTCAGTCTGAAGAGGAAACGTAGACTTGAAGATGCATTC
ATTGTGATATCTGATAGTGATGGAGAGGAACCAAAGGAGGAGAATGGATTGCAGAAAATGAAGA
CAAAACAGTCGAATAGAACAAAGTGTTTGGCTAAAAGAAAAATTGCACAAATGACAGAAGAGGA
ACAGTTTGCTCTGGCTCTCAAAATGAGTGAGCAGGAAGCTAGGGAGATGAACAGCCAGGAGGAG
GAAGAAGAGGAACTCTTGAGGAAGGCCATTGCAGAAAGCCTGAATAGTTGCCGACCTTCTGATG
CTTCTGCTACCAGATCTCGACCTCTGGCCACTGGACCATCTTCACAGTCCCACCAAGAGAAAAC
AACAGACTCTGGGACCACTGAAGGCATATGGCAGCTGGTACCTCCATCACTGTTTAAAGGCTCA
CATATCAGTCAGGGAAACGAGGCTGAGGAAAGAGAGGAGCCTTGGGACCACACTGAAAACACTG
AAGAGGAGCCGGTCTTTGGCAGCTCAGGAAGCTGGGATCAGTCAAGCCAGCCAGTGTTTGAGAA
TGAGAATGTTAAATGTTTTGACAGATGTACTGGCCACTTGGCTAAGCACACACAGTGTGAGAAG
CCACAGGAAAGTACTGGGAGGGGTTGTGCTTTTCACAGAGCTGCCCAGGGTAGGGGGGACATGT
CTAGGCACTGTCTGCCTACCCCAGGAGATACCAGAGGTCTCCAGGATGTTGGGGGCACTGTGCA
CTACTTCTGGGGTATTCCATTCTGCCCTGCTGGAGTAGACCCTAACCAATATACCAAGGTCATT
CTCTGCCAGTTGGAGGTTTATCAAAAGAGCCTAAAAATGGCTCAGAGGCAGCTCTTTAAAAAAA
AAGGGTTTGGGGAACCAGTGTTACCTAGACCTCCTTCTCTGATCCAGAATGAATGTGGCCAAGG
AGATCAGGCTAGTGAAAAAAATGAAGTCATCTCAGAAGATATGGGAGATGAAGACAAAGAGGAG
AGGCAGGAGTCTAGGGCATCTGTCTGGCACTCAAAAACCAAGGATTTCCAAGAAAGCCCAATTA
AAAGCTTGAAAGAGAAACTTTTGTTGGAGGAAGAACCAACAACCAGTCATGGTCAGTCTTCCCA
AGGGCTGTTTGTTGAAGAAACTTCTGAAGAAGGAAACTCTGTACCTGCTTCACAAAGCATTGCT
GCTTTGACCAGTAAGAGAAGCTCAGTCCTTATGCCAGAGAGTTCTGCAGAGGAAATCACTGTGT
GTCCTGAGACACAGCTAAGTTCTGAAACATTTGACCTTGAAAGAGAAGTCTCTCCAAGTAGCAG
AGAGATCCTGGATGAAGTAAGAATAATAATGGCAGATAAGGAGGTTGATAACAGGGGAAATGCT
GAGAAGGAAATACCCATTTCTACAGTCTCATCCAGTACCCAGGTGTCCTGCCCACTATGTGACC
AAGGCTTCCCACCCACAAAGATTGAGCGACATGCCATGTACTGCAATGGGCTGATAGGGCAAGA
CACAGTGTTGACTCGGAGACAAAAAGAGGCCAAGAGCAAGAGTGACAGTGGGACAGCTGCCCAG
ACTTCCCTAGACATTGACAAGAATGAGAAGTGTTATCTCTGTAAATCCCTGGTCCCATTCAGAG
AGTACCAGAGTCATGTAGAGTCCTGTCTCCAGCTTGCCAGGGGTGACCAAGGAGCTGGACCTGA
AGAGAGTGGGAAGTTATGCTCAGCTATAGAGGAAAAGCAACAGCATCAGCTGAGGAACCCAAAG
GAAAAAAACCACAGTGAAGGCCGACTCCTCAGTCTCTTGGAGCAGTCTGAACACAAGACTGCAG
GTGAAGACCCCAGGACCAGTTTCGTGAGCTTATGTCGAAGGCCTTCTAATGAAAATAATGACTG
CCAACTCACTGTTTGTTGGAGTTATATGCAGAAATAAAGACCAAGTCTTCAGAAACAGGCTTCA
GGATGCCCTCACCAGGGATGGAAGAGGCAGGCTGCAGCAAAGAGATGCAGAGTTCCCTTGCACA
TCTCGACTTAAATGAGTCTCCCATCAAGTCTTTTGTTTCCATTTCAGAAGCCACAGATTGCTTA
GTGGACTTTAAAAAGCAACTTAACGTTCGGCAAGGTAGTCGGACACGGACCAAAGCAGGCAGAG
GAAGAAGGAGAAAACCCTGAATTTCTAGGGTCCAGACACCGACAAAACCATTAGCAATAGGGGT
GGGCCGTGTCATTAAGTCTTAGTGGCTTCTGTTTCATTGTTGAACAAGTTTTTTGGCCCTTCAG
TTTTCACCACCAGCACCAACTCAGCATTCTTGTTTTGATGTTTTCTATAAGCTATACAGACAAT
TGTGTATAGTATTCTGTTTTATAACAGTCTGGATTCACTTATAGTTAAAAGAAAATTTAAATAT
ATTTATGTTTGTATGAAATCTTATTTCAATAAGATGGAGATCTTCCCTTTTTTCCTCTGTGTTG
CAGGGCTTGGGATGGGAATATTTAAATTGTGGAGCCAGTTCTGAGACTCCTAAATTACATGTTT
CCTAATTAA

hide sequence

RefSeq Acc Id:

XM_022417670 ⟹ XP_022273378

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	36,354,922 - 36,467,035 (+)	NCBI
Dog10K_Boxer_Tasha	4	36,321,496 - 36,433,335 (+)	NCBI

Sequence:

show sequence

ACAAAAGAATGCCACGGAGAAAGAAAAAAGTTAAAGAAGCCTCTGAAGCTCAGAATCTGGAGAA
GAAAGATGCAGAAACTGCCAGTTCTGTCAGTCTGAAGAGGAAACGTAGACTTGAAGATGCATTC
ATTGTGATATCTGATAGTGATGGAGAGGAACCAAAGGAGGAGAATGGATTGCAGAAAATGAAGA
CAAAACAGTCGAATAGAACAAAGTGTTTGGCTAAAAGAAAAATTGCACAAATGACAGAAGAGGA
ACAGTTTGCTCTGGCTCTCAAAATGAGTGAGCAGGAAGCTAGGGAGATGAACAGCCAGGAGGAG
GAAGAAGAGGAACTCTTGAGGAAGGCCATTGCAGAAAGCCTGAATAGTTGCCGACCTTCTGATG
CTTCTGCTACCAGATCTCGACCTCTGGCCACTGGACCATCTTCACAGTCCCACCAAGAGAAAAC
AACAGACTCTGGGACCACTGAAGGCATATGGCAGCTGGTACCTCCATCACTGTTTAAAGGCTCA
CATATCAGTCAGGGAAACGAGGCTGAGGAAAGAGAGGAGCCTTGGGACCACACTGAAAACACTG
AAGAGGAGCCGGTCTTTGGCAGCTCAGGAAGCTGGGATCAGTCAAGCCAGCCAGTGTTTGAGAA
TGAGAATGTTAAATGTTTTGACAGATGTACTGGCCACTTGGCTAAGCACACACAGTGTGAGAAG
CCACAGAATGAATGTGGCCAAGGAGATCAGGCTAGTGAAAAAAATGAAGTCATCTCAGAAGATA
TGGGAGATGAAGACAAAGAGGAGAGGCAGGAGTCTAGGGCATCTGTCTGGCACTCAAAAACCAA
GGATTTCCAAGAAAGCCCAATTAAAAGCTTGAAAGAGAAACTTTTGTTGGAGGAAGAACCAACA
ACCAGTCATGGTCAGTCTTCCCAAGGGCTGTTTGTTGAAGAAACTTCTGAAGAAGGAAACTCTG
TACCTGCTTCACAAAGCATTGCTGCTTTGACCAGTAAGAGAAGCTCAGTCCTTATGCCAGAGAG
TTCTGCAGAGGAAATCACTGTGTGTCCTGAGACACAGCTAAGTTCTGAAACATTTGACCTTGAA
AGAGAAGTCTCTCCAAGTAGCAGAGAGATCCTGGATGAAGTAAGAATAATAATGGCAGATAAGG
AGGTTGATAACAGGGGAAATGCTGAGAAGGAAATACCCATTTCTACAGTCTCATCCAGTACCCA
GGTGTCCTGCCCACTATGTGACCAAGGCTTCCCACCCACAAAGATTGAGCGACATGCCATGTAC
TGCAATGGGCTGATAGGGCAAGACACAGTGTTGACTCGGAGACAAAAAGAGGCCAAGAGCAAGA
GTGACAGTGGGACAGCTGCCCAGACTTCCCTAGACATTGACAAGAATGAGAAGTGTTATCTCTG
TAAATCCCTGGTCCCATTCAGAGAGTACCAGAGTCATGTAGAGTCCTGTCTCCAGCTTGCCAGG
GGTGACCAAGGAGCTGGACCTGAAGAGAGTGGGAAGTTATGCTCAGCTATAGAGGAAAAGCAAC
AGCATCAGCTGAGGAACCCAAAGGAAAAAAACCACAGTGAAGGCCGACTCCTCAGTCTCTTGGA
GCAGTCTGAACACAAGACTGCAGATGCAGAAATAAAGACCAAGTCTTCAGAAACAGGCTTCAGG
ATGCCCTCACCAGGGATGGAAGAGGCAGGCTGCAGCAAAGAGATGCAGAGTTCCCTTGCACATC
TCGACTTAAATGAGTCTCCCATCAAGTCTTTTGTTTCCATTTCAGAAGCCACAGATTGCTTAGT
GGACTTTAAAAAGCAACTTAACGTTCGGCAAGGTAGTCGGACACGGACCAAAGCAGGCAGAGGA
AGAAGGAGAAAACCCTGAATTTCTAGGGTCCAGACACCGACAAAACCATTAGCAATAGGGGTGG
GCCGTGTCATTAAGTCTTAGTGGCTTCTGTTTCATTGTTGAACAAGTTTTTTGGCCCTTCAGTT
TTCACCACCAGCACCAACTCAGCATTCTTGTTTTGATGTTTTCTATAAGCTATACAGACAATTG
TGTATAGTATTCTGTTTTATAACAGTCTGGATTCACTTATAGTTAAAAGAAAATTTAAATATAT
TTATGTTTGTATGAAATCTTATTTCAATAAGATGGAGATCTTCCCTTTTTTCCTCTGTGTTGCA
GGGCTTGGGATGGGAATATTTAAATTGTGGAGCCAGTTCTGAGACTCCTAAATTACATGTTTCC
TAATTAA

hide sequence

RefSeq Acc Id:

XM_022417671 ⟹ XP_022273379

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	36,354,922 - 36,432,769 (+)	NCBI
Dog10K_Boxer_Tasha	4	36,321,496 - 36,399,185 (+)	NCBI

Sequence:

show sequence

ACAAAAGAATGCCACGGAGAAAGAAAAAAGTTAAAGAAGCCTCTGAAGCTCAGAATCTGGAGAA
GAAAGATGCAGAAACTGCCAGTTCTGTCAGTCTGAAGAGGAAACGTAGACTTGAAGATGCATTC
ATTGTGATATCTGATAGTGATGGAGAGGAACCAAAGGAGGAGAATGGATTGCAGAAAATGAAGA
CAAAACAGTCGAATAGAACAAAGTGTTTGGCTAAAAGAAAAATTGCACAAATGACAGAAGAGGA
ACAGTTTGCTCTGGCTCTCAAAATGAGTGAGCAGGAAGCTAGGGAGATGAACAGCCAGGAGGAG
GAAGAAGAGGAACTCTTGAGGAAGGCCATTGCAGAAAGCCTGAATAGTTGCCGACCTTCTGATG
CTTCTGCTACCAGATCTCGACCTCTGGCCACTGGACCATCTTCACAGTCCCACCAAGAGAAAAC
AACAGACTCTGGGACCACTGAAGGCATATGGCAGCTGGTACCTCCATCACTGTTTAAAGGCTCA
CATATCAGTCAGGGAAACGAGGCTGAGGAAAGAGAGGAGCCTTGGGACCACACTGAAAACACTG
AAGAGGAGCCGGTCTTTGGCAGCTCAGGAAGCTGGGATCAGTCAAGCCAGCCAGTGTTTGAGAA
TGAGAATGTTAAATGTTTTGACAGATGTACTGGCCACTTGGCTAAGCACACACAGTGTGAGAAG
CCACAGGAAAGTACTGGGAGGGGTTGTGCTTTTCACAGAGCTGCCCAGGGTAGGGGGGACATGT
CTAGGCACTGTCTGCCTACCCCAGGAGATACCAGAGGTCTCCAGGATGTTGGGGGCACTGTGCA
CTACTTCTGGGGTATTCCATTCTGCCCTGCTGGAGTAGACCCTAACCAATATACCAAGGTCATT
CTCTGCCAGTTGGAGGTTTATCAAAAGAGCCTAAAAATGGCTCAGAGGCAGCTCTTTAAAAAAA
AAGGGTTTGGGGAACCAGTGTTACCTAGACCTCCTTCTCTGATCCAGAATGAATGTGGCCAAGG
AGATCAGGCTAGTGAAAAAAATGAAGTCATCTCAGAAGATATGGGAGATGAAGACAAAGAGGAG
AGGCAGGAGTCTAGGGCATCTGTCTGGCACTCAAAAACCAAGGATTTCCAAGAAAGCCCAATTA
AAAGCTTGAAAGAGAAACTTTTGTTGGAGGAAGAACCAACAACCAGTCATGGTCAGTCTTCCCA
AGGGCTGTTTGTTGAAGAAACTTCTGAAGAAGGAAACTCTGTACCTGCTTCACAAAGCATTGCT
GCTTTGACCAGTAAGAGAAGCTCAGTCCTTATGCCAGAGAGTTCTGCAGAGGAAATCACTGTGT
GTCCTGAGACACAGCTAAGTTCTGAAACATTTGACCTTGAAAGAGAAGTCTCTCCAAGTAGCAG
AGAGATCCTGGATGAAGTAAGAATAATAATGGCAGATAAGGAGGTTGATAACAGGGGAAATGCT
GAGAAGGAAATACCCATTTCTACAGTCTCATCCAGTACCCAGGTGTCCTGCCCACTATGTGACC
AAGGCTTCCCACCCACAAAGATTGAGCGACATGCCATGTACTGCAATGGGCTGATAGGGCAAGA
CACAGGAACTACTGGTTACCTCTTGAAAAGAACATCAAAAACCTTGGTTTTGGTGCAATATGAG
TTATTGATCAAGAGAATCTGCTTGTTCATCACAGCCCTTGAATTACCACCTCCAATCTTGCCTT
TCTGTCTGTGGCTTTACCCTCCAAGAATACTAGTAATCAGCTCAGCTCTCTGTGGTCCAATATG
CTGATTATAACCATACCTT

hide sequence

RefSeq Acc Id:

XM_038473605 ⟹ XP_038329533

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	36,531,498 - 36,658,474 (+)	NCBI

RefSeq Acc Id:

XM_038473606 ⟹ XP_038329534

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	36,532,174 - 36,658,474 (+)	NCBI

RefSeq Acc Id:

XM_038473607 ⟹ XP_038329535

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	36,546,697 - 36,658,474 (+)	NCBI

RefSeq Acc Id:

XM_038473608 ⟹ XP_038329536

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	36,546,697 - 36,658,474 (+)	NCBI

RefSeq Acc Id:

XM_038473609 ⟹ XP_038329537

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	36,546,697 - 36,624,335 (+)	NCBI

RefSeq Acc Id:

XM_038494098 ⟹ XP_038350026

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	4	36,306,999 - 36,433,335 (+)	NCBI

RefSeq Acc Id:

XM_038534679 ⟹ XP_038390607

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	37,226,943 - 37,354,416 (+)	NCBI

RefSeq Acc Id:

XM_038534680 ⟹ XP_038390608

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	37,227,619 - 37,354,416 (+)	NCBI

RefSeq Acc Id:

XM_038534681 ⟹ XP_038390609

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	37,242,155 - 37,354,416 (+)	NCBI

RefSeq Acc Id:

XM_038534682 ⟹ XP_038390610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	37,242,155 - 37,354,416 (+)	NCBI

RefSeq Acc Id:

XM_038534683 ⟹ XP_038390611

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	37,242,155 - 37,320,228 (+)	NCBI

RefSeq Acc Id:

XM_038598982 ⟹ XP_038454910

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	36,719,094 - 36,846,322 (+)	NCBI

RefSeq Acc Id:

XM_038598983 ⟹ XP_038454911

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	36,719,770 - 36,846,322 (+)	NCBI

RefSeq Acc Id:

XM_038598984 ⟹ XP_038454912

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	36,734,269 - 36,846,322 (+)	NCBI

RefSeq Acc Id:

XM_038598985 ⟹ XP_038454913

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	36,734,269 - 36,846,322 (+)	NCBI

RefSeq Acc Id:

XM_038598986 ⟹ XP_038454914

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	36,734,269 - 36,812,173 (+)	NCBI

RefSeq Acc Id:

XM_038663287 ⟹ XP_038519215

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	36,704,960 - 36,832,383 (+)	NCBI

RefSeq Acc Id:

XM_038663288 ⟹ XP_038519216

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	36,705,636 - 36,832,383 (+)	NCBI

RefSeq Acc Id:

XM_038663289 ⟹ XP_038519217

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	36,720,174 - 36,832,383 (+)	NCBI

RefSeq Acc Id:

XM_038663290 ⟹ XP_038519218

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	36,720,174 - 36,832,383 (+)	NCBI

RefSeq Acc Id:

XM_038663291 ⟹ XP_038519219

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	36,720,174 - 36,798,232 (+)	NCBI

RefSeq Acc Id:

XM_848945 ⟹ XP_854038

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	36,339,711 - 36,466,949 (+)	NCBI
Dog10K_Boxer_Tasha	4	36,306,323 - 36,433,335 (+)	NCBI

Sequence:

show sequence

CGCCAGCGCGACTCCTCCCGGCGGCGCCTCAGCTTCGCGCCAGCCCGCCCCCCGCTCCTGACGT
GCTCCGGACGCTCGCGACCCGCAGGGCCCGGGAGGAGGGGCTCGGCAGTGGGGAGCCGGCCGGT
CGACAAAAGAATGCCACGGAGAAAGAAAAAAGTTAAAGAAGCCTCTGAAGCTCAGAATCTGGAG
AAGAAAGATGCAGAAACTGCCAGTTCTGTCAGTCTGAAGAGGAAACGTAGACTTGAAGATGCAT
TCATTGTGATATCTGATAGTGATGGAGAGGAACCAAAGGAGGAGAATGGATTGCAGAAAATGAA
GACAAAACAGTCGAATAGAACAAAGTGTTTGGCTAAAAGAAAAATTGCACAAATGACAGAAGAG
GAACAGTTTGCTCTGGCTCTCAAAATGAGTGAGCAGGAAGCTAGGGAGATGAACAGCCAGGAGG
AGGAAGAAGAGGAACTCTTGAGGAAGGCCATTGCAGAAAGCCTGAATAGTTGCCGACCTTCTGA
TGCTTCTGCTACCAGATCTCGACCTCTGGCCACTGGACCATCTTCACAGTCCCACCAAGAGAAA
ACAACAGACTCTGGGACCACTGAAGGCATATGGCAGCTGGTACCTCCATCACTGTTTAAAGGCT
CACATATCAGTCAGGGAAACGAGGCTGAGGAAAGAGAGGAGCCTTGGGACCACACTGAAAACAC
TGAAGAGGAGCCGGTCTTTGGCAGCTCAGGAAGCTGGGATCAGTCAAGCCAGCCAGTGTTTGAG
AATGAGAATGTTAAATGTTTTGACAGATGTACTGGCCACTTGGCTAAGCACACACAGTGTGAGA
AGCCACAGGAAAGTACTGGGAGGGGTTGTGCTTTTCACAGAGCTGCCCAGGGTAGGGGGGACAT
GTCTAGGCACTGTCTGCCTACCCCAGGAGATACCAGAGGTCTCCAGGATGTTGGGGGCACTGTG
CACTACTTCTGGGGTATTCCATTCTGCCCTGCTGGAGTAGACCCTAACCAATATACCAAGGTCA
TTCTCTGCCAGTTGGAGGTTTATCAAAAGAGCCTAAAAATGGCTCAGAGGCAGCTCTTTAAAAA
AAAAGGGTTTGGGGAACCAGTGTTACCTAGACCTCCTTCTCTGATCCAGAATGAATGTGGCCAA
GGAGATCAGGCTAGTGAAAAAAATGAAGTCATCTCAGAAGATATGGGAGATGAAGACAAAGAGG
AGAGGCAGGAGTCTAGGGCATCTGTCTGGCACTCAAAAACCAAGGATTTCCAAGAAAGCCCAAT
TAAAAGCTTGAAAGAGAAACTTTTGTTGGAGGAAGAACCAACAACCAGTCATGGTCAGTCTTCC
CAAGGGCTGTTTGTTGAAGAAACTTCTGAAGAAGGAAACTCTGTACCTGCTTCACAAAGCATTG
CTGCTTTGACCAGTAAGAGAAGCTCAGTCCTTATGCCAGAGAGTTCTGCAGAGGAAATCACTGT
GTGTCCTGAGACACAGCTAAGTTCTGAAACATTTGACCTTGAAAGAGAAGTCTCTCCAAGTAGC
AGAGAGATCCTGGATGAAGTAAGAATAATAATGGCAGATAAGGAGGTTGATAACAGGGGAAATG
CTGAGAAGGAAATACCCATTTCTACAGTCTCATCCAGTACCCAGGTGTCCTGCCCACTATGTGA
CCAAGGCTTCCCACCCACAAAGATTGAGCGACATGCCATGTACTGCAATGGGCTGATAGGGCAA
GACACAGTGTTGACTCGGAGACAAAAAGAGGCCAAGAGCAAGAGTGACAGTGGGACAGCTGCCC
AGACTTCCCTAGACATTGACAAGAATGAGAAGTGTTATCTCTGTAAATCCCTGGTCCCATTCAG
AGAGTACCAGAGTCATGTAGAGTCCTGTCTCCAGCTTGCCAGGGGTGACCAAGGAGCTGGACCT
GAAGAGAGTGGGAAGTTATGCTCAGCTATAGAGGAAAAGCAACAGCATCAGCTGAGGAACCCAA
AGGAAAAAAACCACAGTGAAGGCCGACTCCTCAGTCTCTTGGAGCAGTCTGAACACAAGACTGC
AGATGCAGAAATAAAGACCAAGTCTTCAGAAACAGGCTTCAGGATGCCCTCACCAGGGATGGAA
GAGGCAGGCTGCAGCAAAGAGATGCAGAGTTCCCTTGCACATCTCGACTTAAATGAGTCTCCCA
TCAAGTCTTTTGTTTCCATTTCAGAAGCCACAGATTGCTTAGTGGACTTTAAAAAGCAACTTAA
CGTTCGGCAAGGTAGTCGGACACGGACCAAAGCAGGCAGAGGAAGAAGGAGAAAACCCTGAATT
TCTAGGGTCCAGACACCGACAAAACCATTAGCAATAGGGGTGGGCCGTGTCATTAAGTCTTAGT
GGCTTCTGTTTCATTGTTGAACAAGTTTTTTGGCCCTTCAGTTTTCACCACCAGCACCAACTCA
GCATTCTTGTTTTGATGTTTTCTATAAGCTATACAGACAATTGTGTATAGTATTCTGTTTTATA
ACAGTCTGGATTCACTTATAGTTAAAAGAAAATTTAAATATATTTATGTTTGTATGAAATCTTA
TTTCAATAAGATGGAGATCTTCCCTTTT

hide sequence

Protein Sequences


Protein RefSeqs	XP_022273377	(Get FASTA)	NCBI Sequence Viewer
	XP_022273378	(Get FASTA)	NCBI Sequence Viewer
	XP_022273379	(Get FASTA)	NCBI Sequence Viewer
	XP_038329533	(Get FASTA)	NCBI Sequence Viewer
	XP_038329534	(Get FASTA)	NCBI Sequence Viewer
	XP_038329535	(Get FASTA)	NCBI Sequence Viewer
	XP_038329536	(Get FASTA)	NCBI Sequence Viewer
	XP_038329537	(Get FASTA)	NCBI Sequence Viewer
	XP_038350026	(Get FASTA)	NCBI Sequence Viewer
	XP_038390607	(Get FASTA)	NCBI Sequence Viewer
	XP_038390608	(Get FASTA)	NCBI Sequence Viewer
	XP_038390609	(Get FASTA)	NCBI Sequence Viewer
	XP_038390610	(Get FASTA)	NCBI Sequence Viewer
	XP_038390611	(Get FASTA)	NCBI Sequence Viewer
	XP_038454910	(Get FASTA)	NCBI Sequence Viewer
	XP_038454911	(Get FASTA)	NCBI Sequence Viewer
	XP_038454912	(Get FASTA)	NCBI Sequence Viewer
	XP_038454913	(Get FASTA)	NCBI Sequence Viewer
	XP_038454914	(Get FASTA)	NCBI Sequence Viewer
	XP_038519215	(Get FASTA)	NCBI Sequence Viewer
	XP_038519216	(Get FASTA)	NCBI Sequence Viewer
	XP_038519217	(Get FASTA)	NCBI Sequence Viewer
	XP_038519218	(Get FASTA)	NCBI Sequence Viewer
	XP_038519219	(Get FASTA)	NCBI Sequence Viewer
	XP_854038	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000024343.3
	ENSCAFP00000043491.1
	ENSCAFP00000046894.1
	ENSCAFP00030004519.1
	ENSCAFP00030004553.1
	ENSCAFP00030004582.1
	ENSCAFP00030004600.1
	ENSCAFP00040026427.1
	ENSCAFP00040026515.1
	ENSCAFP00040026608.1
	ENSCAFP00845015903
	ENSCAFP00845015903.1
	ENSCAFP00845015917.1
	ENSCAFP00845015965.1

RefSeq Acc Id:	XP_854038 ⟸ XM_848945
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0YZX9 (UniProtKB/TrEMBL), A0A8C0KCK0 (UniProtKB/TrEMBL), A0A8I3NJJ6 (UniProtKB/TrEMBL), A0A8C0M3Y3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRRKKKVKEASEAQNLEKKDAETASSVSLKRKRRLEDAFIVISDSDGEEPKEENGLQKMKTKQ SNRTKCLAKRKIAQMTEEEQFALALKMSEQEAREMNSQEEEEEELLRKAIAESLNSCRPSDASA TRSRPLATGPSSQSHQEKTTDSGTTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEE PVFGSSGSWDQSSQPVFENENVKCFDRCTGHLAKHTQCEKPQESTGRGCAFHRAAQGRGDMSRH CLPTPGDTRGLQDVGGTVHYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGF GEPVLPRPPSLIQNECGQGDQASEKNEVISEDMGDEDKEERQESRASVWHSKTKDFQESPIKSL KEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSIAALTSKRSSVLMPESSAEEITVCPE TQLSSETFDLEREVSPSSREILDEVRIIMADKEVDNRGNAEKEIPISTVSSSTQVSCPLCDQGF PPTKIERHAMYCNGLIGQDTVLTRRQKEAKSKSDSGTAAQTSLDIDKNEKCYLCKSLVPFREYQ SHVESCLQLARGDQGAGPEESGKLCSAIEEKQQHQLRNPKEKNHSEGRLLSLLEQSEHKTADAE IKTKSSETGFRMPSPGMEEAGCSKEMQSSLAHLDLNESPIKSFVSISEATDCLVDFKKQLNVRQ GSRTRTKAGRGRRRKP hide sequence

RefSeq Acc Id:	XP_022273377 ⟸ XM_022417669
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M3Y3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRRKKKVKEASEAQNLEKKDAETASSVSLKRKRRLEDAFIVISDSDGEEPKEENGLQKMKTKQ SNRTKCLAKRKIAQMTEEEQFALALKMSEQEAREMNSQEEEEEELLRKAIAESLNSCRPSDASA TRSRPLATGPSSQSHQEKTTDSGTTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEE PVFGSSGSWDQSSQPVFENENVKCFDRCTGHLAKHTQCEKPQESTGRGCAFHRAAQGRGDMSRH CLPTPGDTRGLQDVGGTVHYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGF GEPVLPRPPSLIQNECGQGDQASEKNEVISEDMGDEDKEERQESRASVWHSKTKDFQESPIKSL KEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSIAALTSKRSSVLMPESSAEEITVCPE TQLSSETFDLEREVSPSSREILDEVRIIMADKEVDNRGNAEKEIPISTVSSSTQVSCPLCDQGF PPTKIERHAMYCNGLIGQDTVLTRRQKEAKSKSDSGTAAQTSLDIDKNEKCYLCKSLVPFREYQ SHVESCLQLARGDQGAGPEESGKLCSAIEEKQQHQLRNPKEKNHSEGRLLSLLEQSEHKTAGED PRTSFVSLCRRPSNENNDCQLTVCWSYMQK hide sequence

RefSeq Acc Id:

XP_022273378 ⟸ XM_022417670

- Peptide Label:

isoform X3

- Sequence:

show sequence

MPRRKKKVKEASEAQNLEKKDAETASSVSLKRKRRLEDAFIVISDSDGEEPKEENGLQKMKTKQ
SNRTKCLAKRKIAQMTEEEQFALALKMSEQEAREMNSQEEEEEELLRKAIAESLNSCRPSDASA
TRSRPLATGPSSQSHQEKTTDSGTTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEE
PVFGSSGSWDQSSQPVFENENVKCFDRCTGHLAKHTQCEKPQNECGQGDQASEKNEVISEDMGD
EDKEERQESRASVWHSKTKDFQESPIKSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPA
SQSIAALTSKRSSVLMPESSAEEITVCPETQLSSETFDLEREVSPSSREILDEVRIIMADKEVD
NRGNAEKEIPISTVSSSTQVSCPLCDQGFPPTKIERHAMYCNGLIGQDTVLTRRQKEAKSKSDS
GTAAQTSLDIDKNEKCYLCKSLVPFREYQSHVESCLQLARGDQGAGPEESGKLCSAIEEKQQHQ
LRNPKEKNHSEGRLLSLLEQSEHKTADAEIKTKSSETGFRMPSPGMEEAGCSKEMQSSLAHLDL
NESPIKSFVSISEATDCLVDFKKQLNVRQGSRTRTKAGRGRRRKP

hide sequence

RefSeq Acc Id:

XP_022273379 ⟸ XM_022417671

- Peptide Label:

isoform X4

- Sequence:

show sequence

MPRRKKKVKEASEAQNLEKKDAETASSVSLKRKRRLEDAFIVISDSDGEEPKEENGLQKMKTKQ
SNRTKCLAKRKIAQMTEEEQFALALKMSEQEAREMNSQEEEEEELLRKAIAESLNSCRPSDASA
TRSRPLATGPSSQSHQEKTTDSGTTEGIWQLVPPSLFKGSHISQGNEAEEREEPWDHTENTEEE
PVFGSSGSWDQSSQPVFENENVKCFDRCTGHLAKHTQCEKPQESTGRGCAFHRAAQGRGDMSRH
CLPTPGDTRGLQDVGGTVHYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLFKKKGF
GEPVLPRPPSLIQNECGQGDQASEKNEVISEDMGDEDKEERQESRASVWHSKTKDFQESPIKSL
KEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPASQSIAALTSKRSSVLMPESSAEEITVCPE
TQLSSETFDLEREVSPSSREILDEVRIIMADKEVDNRGNAEKEIPISTVSSSTQVSCPLCDQGF
PPTKIERHAMYCNGLIGQDTGTTGYLLKRTSKTLVLVQYELLIKRICLFITALELPPPILPFCL
WLYPPRILVISSALCGPIC

hide sequence

Ensembl Acc Id:

ENSCAFP00000043491 ⟸ ENSCAFT00000093929

Ensembl Acc Id:

ENSCAFP00000046894 ⟸ ENSCAFT00000075164

Ensembl Acc Id:

ENSCAFP00000024343 ⟸ ENSCAFT00000026215

RefSeq Acc Id:	XP_038329533 ⟸ XM_038473605
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038329534 ⟸ XM_038473606
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038329535 ⟸ XM_038473607
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038329536 ⟸ XM_038473608
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038329537 ⟸ XM_038473609
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038454910 ⟸ XM_038598982
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038454911 ⟸ XM_038598983
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038454912 ⟸ XM_038598984
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038454913 ⟸ XM_038598985
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038454914 ⟸ XM_038598986
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038519215 ⟸ XM_038663287
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0YZX9 (UniProtKB/TrEMBL), A0A8C0KCK0 (UniProtKB/TrEMBL), A0A8I3NJJ6 (UniProtKB/TrEMBL), A0A8C0M3Y3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038519216 ⟸ XM_038663288
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0YZX9 (UniProtKB/TrEMBL), A0A8C0KCK0 (UniProtKB/TrEMBL), A0A8I3NJJ6 (UniProtKB/TrEMBL), A0A8C0M3Y3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038519217 ⟸ XM_038663289
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M3Y3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038519218 ⟸ XM_038663290
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038519219 ⟸ XM_038663291
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038350026 ⟸ XM_038494098
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0YZX9 (UniProtKB/TrEMBL), A0A8C0KCK0 (UniProtKB/TrEMBL), A0A8I3NJJ6 (UniProtKB/TrEMBL), A0A8C0M3Y3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390607 ⟸ XM_038534679
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KCK0 (UniProtKB/TrEMBL), A0A8C0M3Y3 (UniProtKB/TrEMBL), A0A8C0YZX9 (UniProtKB/TrEMBL), A0A8I3NJJ6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390608 ⟸ XM_038534680
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KCK0 (UniProtKB/TrEMBL), A0A8C0M3Y3 (UniProtKB/TrEMBL), A0A8C0YZX9 (UniProtKB/TrEMBL), A0A8I3NJJ6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390609 ⟸ XM_038534681
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M3Y3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038390610 ⟸ XM_038534682
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038390611 ⟸ XM_038534683
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSCAFP00845015903 ⟸ ENSCAFT00845020292

Ensembl Acc Id:

ENSCAFP00845015965 ⟸ ENSCAFT00845020367

Ensembl Acc Id:

ENSCAFP00845015917 ⟸ ENSCAFT00845020307

Protein Domains

UBZ4-type

Promoters

RGD ID:

13682963

Promoter ID:

EPDNEW_C1032

Type:

initiation region

Name:

UIMC1_1

Description:

ubiquitin interaction motif containing 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	36,339,741 - 36,339,801	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000016547	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030002724	UniProtKB/TrEMBL
	ENSCAFG00040016390	UniProtKB/TrEMBL
	ENSCAFG00845011414	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000026215.5	UniProtKB/TrEMBL
	ENSCAFT00000075164.2	UniProtKB/TrEMBL
	ENSCAFT00000093929.2	UniProtKB/TrEMBL
	ENSCAFT00030005088.1	UniProtKB/TrEMBL
	ENSCAFT00030005123.1	UniProtKB/TrEMBL
	ENSCAFT00030005159.1	UniProtKB/TrEMBL
	ENSCAFT00030005180.1	UniProtKB/TrEMBL
	ENSCAFT00040030408.1	UniProtKB/TrEMBL
	ENSCAFT00040030506.1	UniProtKB/TrEMBL
	ENSCAFT00040030612.1	UniProtKB/TrEMBL
	ENSCAFT00845020292	ENTREZGENE
	ENSCAFT00845020292.1	UniProtKB/TrEMBL
	ENSCAFT00845020307.1	UniProtKB/TrEMBL
	ENSCAFT00845020367.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.250.1800	UniProtKB/TrEMBL
InterPro	Rad18_UBZ4	UniProtKB/TrEMBL
	RAP80	UniProtKB/TrEMBL
	RAP80_UIM	UniProtKB/TrEMBL
	UIM_dom	UniProtKB/TrEMBL
NCBI Gene	UIMC1	ENTREZGENE
PANTHER	BRCA1-A COMPLEX SUBUNIT RAP80	UniProtKB/TrEMBL
	PTHR15932	UniProtKB/TrEMBL
Pfam	RAP80_UIM	UniProtKB/TrEMBL
PROSITE	UIM	UniProtKB/TrEMBL
	ZF_UBZ4	UniProtKB/TrEMBL
SMART	UIM	UniProtKB/TrEMBL
UniProt	A0A8C0KCK0	ENTREZGENE
	A0A8C0M3Y3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0M629_CANLF	UniProtKB/TrEMBL
	A0A8C0SU93_CANLF	UniProtKB/TrEMBL
	A0A8C0YZX9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N879_CANLF	UniProtKB/TrEMBL
	A0A8I3NHS6_CANLF	UniProtKB/TrEMBL
	A0A8I3NJJ6	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:48127	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar