TDRD9 (tudor domain containing 9) - Rat Genome Database

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Gene: TDRD9 (tudor domain containing 9) Canis lupus familiaris
Analyze
Symbol: TDRD9
Name: tudor domain containing 9
RGD ID: 12061404
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); helicase activity (inferred); INVOLVED IN transposable element silencing (ortholog); ASSOCIATED WITH azoospermia (ortholog); Charcot-Marie-Tooth disease axonal type 2O (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred); piP-body (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ATP-dependent RNA helicase TDRD9; putative ATP-dependent RNA helicase TDRD9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1871,610,653 - 71,717,772 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl871,610,711 - 71,717,199 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha871,120,610 - 71,228,073 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0871,886,616 - 71,993,319 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl871,888,154 - 71,992,748 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1871,575,326 - 71,683,074 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0871,615,778 - 71,722,590 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0872,014,293 - 72,121,198 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA)
nucleus  (IBA,IEA)
piP-body  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
TDRD9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1871,610,653 - 71,717,772 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl871,610,711 - 71,717,199 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha871,120,610 - 71,228,073 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0871,886,616 - 71,993,319 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl871,888,154 - 71,992,748 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1871,575,326 - 71,683,074 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0871,615,778 - 71,722,590 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0872,014,293 - 72,121,198 (+)NCBIUU_Cfam_GSD_1.0
TDRD9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3814103,928,456 - 104,052,667 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl14103,928,456 - 104,052,667 (+)EnsemblGRCh38hg38GRCh38
GRCh3714104,394,793 - 104,519,004 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3614103,506,687 - 103,588,755 (+)NCBINCBI36Build 36hg18NCBI36
Build 3414103,506,686 - 103,588,755NCBI
Celera1484,449,057 - 84,573,226 (+)NCBICelera
Cytogenetic Map14q32.33NCBI
HuRef1484,574,195 - 84,698,206 (+)NCBIHuRef
CHM1_114104,333,415 - 104,457,554 (+)NCBICHM1_1
T2T-CHM13v2.01498,165,768 - 98,289,910 (+)NCBIT2T-CHM13v2.0
Tdrd9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912111,937,922 - 112,035,288 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12111,937,993 - 112,035,288 (+)EnsemblGRCm39 Ensembl
GRCm3812111,971,488 - 112,068,854 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12111,971,559 - 112,068,854 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712113,209,770 - 113,307,065 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612112,441,483 - 112,516,088 (+)NCBIMGSCv36mm8
Celera12113,183,556 - 113,261,746 (+)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1261.14NCBI
Tdrd9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86136,850,797 - 136,966,225 (+)NCBIGRCr8
mRatBN7.26131,029,644 - 131,145,076 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6131,029,652 - 131,144,651 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.06136,536,636 - 136,650,481 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6136,536,736 - 136,649,859 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06145,545,128 - 145,660,285 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46136,758,888 - 136,876,987 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16136,797,304 - 136,883,174 (+)NCBI
Celera6128,583,056 - 128,697,859 (+)NCBICelera
Cytogenetic Map6q32NCBI
Tdrd9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555382,667,299 - 2,749,248 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555382,667,219 - 2,749,805 (+)NCBIChiLan1.0ChiLan1.0
TDRD9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v215105,086,875 - 105,210,976 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan114104,303,377 - 104,427,478 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01484,553,807 - 84,677,904 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.114104,388,558 - 104,483,554 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl14104,388,558 - 104,483,552 (+)Ensemblpanpan1.1panPan2
Tdrd9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086402,357,686 - 2,454,268 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366211,185,920 - 1,283,303 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366211,186,643 - 1,283,213 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TDRD9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.27131,038,909 - 131,119,104 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TDRD9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12481,864,846 - 81,992,674 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2481,866,235 - 81,992,093 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605369,188,530 - 69,319,098 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tdrd9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624734971,695 - 1,067,121 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624734971,174 - 1,067,178 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TDRD9
1384 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022422472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038674789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000029095   ⟹   ENSCAFP00000027054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl871,644,411 - 71,717,199 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000029096   ⟹   ENSCAFP00000027055
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl871,644,411 - 71,717,199 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000043378   ⟹   ENSCAFP00000042172
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl871,610,711 - 71,717,199 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845036343   ⟹   ENSCAFP00845028448
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl871,888,154 - 71,992,748 (+)Ensembl
RefSeq Acc Id: XM_038484343   ⟹   XP_038340271
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,576,969 - 71,683,074 (+)NCBI
RefSeq Acc Id: XM_038484344   ⟹   XP_038340272
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,576,970 - 71,682,170 (+)NCBI
RefSeq Acc Id: XM_038484345   ⟹   XP_038340273
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,576,970 - 71,683,074 (+)NCBI
RefSeq Acc Id: XM_038484346   ⟹   XP_038340274
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,575,326 - 71,682,170 (+)NCBI
RefSeq Acc Id: XM_038484347   ⟹   XP_038340275
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,576,967 - 71,683,074 (+)NCBI
RefSeq Acc Id: XM_038484348   ⟹   XP_038340276
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,575,328 - 71,682,170 (+)NCBI
RefSeq Acc Id: XM_038484349   ⟹   XP_038340277
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1871,576,958 - 71,661,307 (+)NCBI
RefSeq Acc Id: XM_038545874   ⟹   XP_038401802
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,015,787 - 72,121,198 (+)NCBI
RefSeq Acc Id: XM_038545875   ⟹   XP_038401803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,015,788 - 72,121,198 (+)NCBI
RefSeq Acc Id: XM_038545876   ⟹   XP_038401804
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,015,788 - 72,121,198 (+)NCBI
RefSeq Acc Id: XM_038545877   ⟹   XP_038401805
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,014,293 - 72,121,198 (+)NCBI
RefSeq Acc Id: XM_038545878   ⟹   XP_038401806
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,015,785 - 72,121,198 (+)NCBI
RefSeq Acc Id: XM_038545879   ⟹   XP_038401807
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,014,295 - 72,121,198 (+)NCBI
RefSeq Acc Id: XM_038545880   ⟹   XP_038401808
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0872,015,776 - 72,100,409 (+)NCBI
RefSeq Acc Id: XM_038596647   ⟹   XP_038452575
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,122,252 - 71,228,073 (+)NCBI
RefSeq Acc Id: XM_038596648   ⟹   XP_038452576
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,122,253 - 71,227,169 (+)NCBI
RefSeq Acc Id: XM_038596649   ⟹   XP_038452577
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,122,253 - 71,227,169 (+)NCBI
RefSeq Acc Id: XM_038596659   ⟹   XP_038452587
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,120,610 - 71,227,169 (+)NCBI
RefSeq Acc Id: XM_038596670   ⟹   XP_038452598
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,122,250 - 71,228,073 (+)NCBI
RefSeq Acc Id: XM_038596678   ⟹   XP_038452606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,120,612 - 71,227,169 (+)NCBI
RefSeq Acc Id: XM_038596681   ⟹   XP_038452609
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha871,122,241 - 71,206,376 (+)NCBI
RefSeq Acc Id: XM_038609941   ⟹   XP_038465869
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,617,422 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038609942   ⟹   XP_038465870
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,617,423 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038609943   ⟹   XP_038465871
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,615,778 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038609944   ⟹   XP_038465872
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,617,420 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038609945   ⟹   XP_038465873
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,617,578 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038609946   ⟹   XP_038465874
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,615,780 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038609947   ⟹   XP_038465875
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0871,617,466 - 71,722,590 (+)NCBI
RefSeq Acc Id: XM_038674783   ⟹   XP_038530711
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,888,110 - 71,993,319 (+)NCBI
RefSeq Acc Id: XM_038674784   ⟹   XP_038530712
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,888,111 - 71,993,319 (+)NCBI
RefSeq Acc Id: XM_038674785   ⟹   XP_038530713
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,888,111 - 71,993,319 (+)NCBI
RefSeq Acc Id: XM_038674786   ⟹   XP_038530714
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,886,616 - 71,993,319 (+)NCBI
RefSeq Acc Id: XM_038674787   ⟹   XP_038530715
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,888,108 - 71,993,319 (+)NCBI
RefSeq Acc Id: XM_038674788   ⟹   XP_038530716
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,886,618 - 71,993,319 (+)NCBI
RefSeq Acc Id: XM_038674789   ⟹   XP_038530717
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0871,888,099 - 71,972,528 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038340271 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340272 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340273 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340274 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340275 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340276 (Get FASTA)   NCBI Sequence Viewer  
  XP_038340277 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401802 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401803 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401804 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401805 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401806 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401807 (Get FASTA)   NCBI Sequence Viewer  
  XP_038401808 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452575 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452576 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452577 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452587 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452598 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038452609 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465869 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465870 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465871 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465872 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465873 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465874 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465875 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530711 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530712 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530713 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530714 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530715 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530716 (Get FASTA)   NCBI Sequence Viewer  
  XP_038530717 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000027055.5
  ENSCAFP00000042172.3
  ENSCAFP00030000699.1
  ENSCAFP00040022546.1
  ENSCAFP00845028448
  ENSCAFP00845028448.1
Ensembl Acc Id: ENSCAFP00000027055   ⟸   ENSCAFT00000029096
Ensembl Acc Id: ENSCAFP00000027054   ⟸   ENSCAFT00000029095
Ensembl Acc Id: ENSCAFP00000042172   ⟸   ENSCAFT00000043378
RefSeq Acc Id: XP_038340274   ⟸   XM_038484346
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038340276   ⟸   XM_038484348
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038340277   ⟸   XM_038484349
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038340275   ⟸   XM_038484347
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038340271   ⟸   XM_038484343
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038340273   ⟸   XM_038484345
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038340272   ⟸   XM_038484344
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038465871   ⟸   XM_038609943
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038465874   ⟸   XM_038609946
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038465872   ⟸   XM_038609944
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038465869   ⟸   XM_038609941
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038465870   ⟸   XM_038609942
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038465875   ⟸   XM_038609947
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038465873   ⟸   XM_038609945
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038530714   ⟸   XM_038674786
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530716   ⟸   XM_038674788
- Peptide Label: isoform X7
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530717   ⟸   XM_038674789
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038530715   ⟸   XM_038674787
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530711   ⟸   XM_038674783
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530712   ⟸   XM_038674784
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SJD5 (UniProtKB/TrEMBL),   A0A8I3S4I1 (UniProtKB/TrEMBL),   A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038530713   ⟸   XM_038674785
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038452587   ⟸   XM_038596659
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038452606   ⟸   XM_038596678
- Peptide Label: isoform X7
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038452609   ⟸   XM_038596681
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038452598   ⟸   XM_038596670
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038452575   ⟸   XM_038596647
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038452576   ⟸   XM_038596648
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SJD5 (UniProtKB/TrEMBL),   A0A8I3S4I1 (UniProtKB/TrEMBL),   A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038452577   ⟸   XM_038596649
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401805   ⟸   XM_038545877
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401807   ⟸   XM_038545879
- Peptide Label: isoform X7
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401808   ⟸   XM_038545880
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038401806   ⟸   XM_038545878
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401802   ⟸   XM_038545874
- Peptide Label: isoform X1
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401803   ⟸   XM_038545875
- Peptide Label: isoform X2
- UniProtKB: A0A8C0K7B1 (UniProtKB/TrEMBL),   A0A8C0SJD5 (UniProtKB/TrEMBL),   A0A8I3S4I1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401804   ⟸   XM_038545876
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LWW0 (UniProtKB/TrEMBL),   A0A8P0SMK3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845028448   ⟸   ENSCAFT00845036343
Protein Domains
Helicase ATP-binding   Helicase C-terminal   Tudor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000018311 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030000390 UniProtKB/TrEMBL
  ENSCAFG00040013870 UniProtKB/TrEMBL
  ENSCAFG00845020420 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000029096.5 UniProtKB/TrEMBL
  ENSCAFT00000043378.4 UniProtKB/TrEMBL
  ENSCAFT00030000812.1 UniProtKB/TrEMBL
  ENSCAFT00040025920.1 UniProtKB/TrEMBL
  ENSCAFT00845036343 ENTREZGENE
  ENSCAFT00845036343.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1080 UniProtKB/TrEMBL
  2.30.30.140 UniProtKB/TrEMBL
  2.40.50.90 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro DEAD/DEAH_box_helicase_dom UniProtKB/TrEMBL
  Helicase-assoc_dom UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  SNase_OB-fold_sf UniProtKB/TrEMBL
  Tudor UniProtKB/TrEMBL
  Tudor_TDRD9 UniProtKB/TrEMBL
NCBI Gene TDRD9 ENTREZGENE
PANTHER ATP-DEPENDENT RNA HELICASE UniProtKB/TrEMBL
  ATP-DEPENDENT RNA HELICASE TDRD9 UniProtKB/TrEMBL
Pfam DEAD UniProtKB/TrEMBL
  HA2_C UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  TUDOR UniProtKB/TrEMBL
PROSITE HELICASE_ATP_BIND_1 UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/TrEMBL
  TUDOR UniProtKB/TrEMBL
SMART DEXDc UniProtKB/TrEMBL
  HA2 UniProtKB/TrEMBL
  HELICc UniProtKB/TrEMBL
  TUDOR UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
  Tudor/PWWP/MBT UniProtKB/TrEMBL
UniProt A0A8C0K7B1 ENTREZGENE
  A0A8C0LWW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SJD5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S4I1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SMK3 ENTREZGENE
UniProt Secondary A0A8P0SMK3 UniProtKB/TrEMBL
VGNC ID VGNC:47226 ENTREZGENE