DLL3 (delta like canonical Notch ligand 3) - Rat Genome Database

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Gene: DLL3 (delta like canonical Notch ligand 3) Pan paniscus
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Symbol: DLL3
Name: delta like canonical Notch ligand 3
RGD ID: 12043286
Description: ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN compartment pattern specification (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of neurogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH Carpenter Syndrome 2 (ortholog); Congenital Abnormalities (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: delta-like protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22045,794,577 - 45,804,191 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11947,665,162 - 47,674,775 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01936,597,420 - 36,607,021 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11945,144,641 - 45,154,854 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DLL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22045,794,577 - 45,804,191 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11947,665,162 - 47,674,775 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01936,597,420 - 36,607,021 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11945,144,641 - 45,154,854 (+)NCBIpanpan1.1PanPan1.1panPan2
DLL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381939,498,947 - 39,508,469 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1939,498,895 - 39,508,481 (+)EnsemblGRCh38hg38GRCh38
GRCh371939,989,587 - 39,999,109 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361944,681,427 - 44,690,949 (+)NCBINCBI36Build 36hg18NCBI36
Build 341944,681,426 - 44,690,948NCBI
Celera1936,791,266 - 36,800,828 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1936,435,871 - 36,445,452 (+)NCBIHuRef
CHM1_11939,990,197 - 39,999,736 (+)NCBICHM1_1
T2T-CHM13v2.01942,303,204 - 42,312,726 (+)NCBIT2T-CHM13v2.0
Dll3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39727,992,980 - 28,001,210 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl727,992,978 - 28,001,663 (-)EnsemblGRCm39 Ensembl
GRCm38728,293,555 - 28,301,785 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl728,293,553 - 28,302,238 (-)EnsemblGRCm38mm10GRCm38
MGSCv37729,078,574 - 29,086,804 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36728,002,336 - 28,010,544 (-)NCBIMGSCv36mm8
Celera722,855,195 - 22,863,426 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map716.67NCBI
Dll3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8192,689,577 - 92,698,125 (-)NCBIGRCr8
mRatBN7.2183,562,011 - 83,570,008 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl183,562,014 - 83,569,750 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx188,973,668 - 88,982,023 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0197,431,999 - 97,440,363 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0190,729,526 - 90,737,881 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0185,485,875 - 85,493,683 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl185,485,289 - 85,493,685 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0186,697,034 - 86,704,826 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4183,373,482 - 83,381,219 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1183,451,593 - 83,459,330 (-)NCBI
Celera177,961,035 - 77,968,719 (-)NCBICelera
Cytogenetic Map1q21NCBI
Dll3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546871,004 - 78,827 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546870,714 - 78,831 (-)NCBIChiLan1.0ChiLan1.0
DLL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11113,737,662 - 113,745,936 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1113,141,459 - 113,149,451 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01114,338,412 - 114,346,404 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1114,338,408 - 114,346,328 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11113,897,659 - 113,905,662 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01113,530,679 - 113,538,682 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01114,525,073 - 114,533,065 (-)NCBIUU_Cfam_GSD_1.0
Dll3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934913,893,682 - 13,904,131 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366612,322,531 - 2,329,953 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366612,322,531 - 2,330,150 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl648,147,635 - 48,155,292 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1648,135,738 - 48,155,373 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2643,998,228 - 44,008,477 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DLL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1634,102,433 - 34,114,558 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl634,103,854 - 34,114,103 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607312,125,291 - 12,136,981 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dll3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479412,806,868 - 12,815,582 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479412,806,299 - 12,816,048 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_034945344   ⟹   XP_034801235
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22045,794,577 - 45,803,950 (+)NCBI
NHGRI_mPanPan11947,665,162 - 47,674,533 (+)NCBI
Mhudiblu_PPA_v01936,597,420 - 36,607,021 (+)NCBI
RefSeq Acc Id: XM_034945345   ⟹   XP_034801236
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22045,794,578 - 45,804,191 (+)NCBI
NHGRI_mPanPan11947,665,163 - 47,674,775 (+)NCBI
Mhudiblu_PPA_v01936,597,420 - 36,607,021 (+)NCBI
RefSeq Acc Id: XR_004667866
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22045,794,577 - 45,804,191 (+)NCBI
NHGRI_mPanPan11947,665,162 - 47,674,775 (+)NCBI
Mhudiblu_PPA_v01936,597,420 - 36,607,021 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034801235 (Get FASTA)   NCBI Sequence Viewer  
  XP_034801236 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_034801235   ⟸   XM_034945344
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034801236   ⟸   XM_034945345
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene DLL3 ENTREZGENE