FUT11 (fucosyltransferase 11) - Rat Genome Database

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Gene: FUT11 (fucosyltransferase 11) Pan paniscus
Analyze
Symbol: FUT11
Name: fucosyltransferase 11
RGD ID: 12042525
Description: ENCODES a protein that exhibits alpha-(1->3)-fucosyltransferase activity (inferred); fucosyltransferase activity (inferred); glycosyltransferase activity (inferred); INVOLVED IN N-glycan fucosylation (ortholog); ASSOCIATED WITH stomach cancer (ortholog); FOUND IN Golgi apparatus (inferred); Golgi cisterna membrane (inferred); Golgi membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: alpha-(1,3)-fucosyltransferase 11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01070,295,122 - 70,301,897 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11072,967,970 - 72,974,517 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1072,968,025 - 72,972,030 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
FUT11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01070,295,122 - 70,301,897 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11072,967,970 - 72,974,517 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1072,968,025 - 72,972,030 (+)Ensemblpanpan1.1panPan2
FUT11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381073,772,276 - 73,780,254 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1073,772,276 - 73,780,251 (+)EnsemblGRCh38hg38GRCh38
GRCh371075,532,034 - 75,535,977 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361075,202,055 - 75,205,983 (+)NCBINCBI36Build 36hg18NCBI36
Build 341075,202,054 - 75,205,980NCBI
Celera1068,815,227 - 68,819,145 (+)NCBICelera
Cytogenetic Map10q22.2NCBI
HuRef1069,527,224 - 69,531,120 (+)NCBIHuRef
CHM1_11075,813,820 - 75,817,752 (+)NCBICHM1_1
T2T-CHM13v2.01074,643,692 - 74,651,652 (+)NCBIT2T-CHM13v2.0
Fut11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391420,745,036 - 20,750,265 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1420,745,036 - 20,751,084 (+)EnsemblGRCm39 Ensembl
GRCm381420,694,968 - 20,700,197 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1420,694,968 - 20,701,016 (+)EnsemblGRCm38mm10GRCm38
MGSCv371421,514,190 - 21,519,419 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361419,483,520 - 19,488,749 (+)NCBIMGSCv36mm8
Celera1417,077,738 - 17,082,963 (+)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1411.53NCBI
Fut11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8153,648,022 - 3,651,582 (-)NCBIGRCr8
mRatBN7.2153,598,768 - 3,602,328 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl153,598,758 - 3,602,356 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx153,608,959 - 3,612,519 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,995,435 - 4,998,995 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0153,607,768 - 3,611,328 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0154,031,504 - 4,035,064 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl154,031,504 - 4,035,064 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0158,132,722 - 8,136,282 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4153,824,218 - 3,827,778 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1153,824,207 - 3,827,806 (-)NCBI
Celera15991,857 - 995,417 (+)NCBICelera
Cytogenetic Map15p16NCBI
Fut11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543718,126,167 - 18,132,805 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543718,126,165 - 18,132,874 (-)NCBIChiLan1.0ChiLan1.0
FUT11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1424,209,235 - 24,213,192 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl424,209,271 - 24,212,515 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha424,346,846 - 24,352,467 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0424,489,372 - 24,495,211 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl424,489,388 - 24,492,854 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1424,386,557 - 24,392,344 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0424,587,177 - 24,592,794 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0424,942,244 - 24,947,858 (+)NCBIUU_Cfam_GSD_1.0
Fut11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721356,874,870 - 56,881,772 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365215,369,174 - 5,374,428 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365215,367,614 - 5,374,472 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FUT11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1476,498,827 - 76,505,767 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11476,497,894 - 76,505,776 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21482,625,856 - 82,629,556 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FUT11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1957,593,732 - 57,600,704 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl957,597,011 - 57,600,617 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604818,169,493 - 18,177,902 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fut11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247547,288,945 - 7,293,786 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247547,288,879 - 7,294,832 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000042031   ⟹   ENSPPAP00000019274
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1072,968,025 - 72,972,030 (+)Ensembl
RefSeq Acc Id: XM_003812984   ⟹   XP_003813032
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBI
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBI
Mhudiblu_PPA_v01070,295,164 - 70,299,129 (+)NCBI
PanPan1.11072,968,025 - 72,972,030 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003812985   ⟹   XP_003813033
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBI
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBI
Mhudiblu_PPA_v01070,295,161 - 70,299,129 (+)NCBI
PanPan1.11072,968,025 - 72,972,030 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008965521   ⟹   XP_008963769
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBI
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBI
Mhudiblu_PPA_v01070,295,122 - 70,299,129 (+)NCBI
PanPan1.11072,967,970 - 72,972,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008965523   ⟹   XP_008963771
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBI
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBI
Mhudiblu_PPA_v01070,295,122 - 70,298,463 (+)NCBI
PanPan1.11072,967,970 - 72,971,340 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024930457   ⟹   XP_024786225
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBI
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBI
Mhudiblu_PPA_v01070,295,122 - 70,301,897 (+)NCBI
PanPan1.11072,967,970 - 72,974,517 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055093025   ⟹   XP_054949000
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2885,923,086 - 85,931,133 (+)NCBI
NHGRI_mPanPan11085,928,410 - 85,936,457 (+)NCBI
RefSeq Acc Id: XP_008963769   ⟸   XM_008965521
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008963771   ⟸   XM_008965523
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_003813033   ⟸   XM_003812985
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_003813032   ⟸   XM_003812984
- Peptide Label: isoform X4
- UniProtKB: A0A2R9AWC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024786225   ⟸   XM_024930457
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSPPAP00000019274   ⟸   ENSPPAT00000042031
RefSeq Acc Id: XP_054949000   ⟸   XM_055093025
- Peptide Label: isoform X6

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000032820 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000042031.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.11660 UniProtKB/TrEMBL
InterPro Alpha-1_3-FUT_met UniProtKB/TrEMBL
  Glyco_tran_10_N UniProtKB/TrEMBL
  Glyco_trans_10 UniProtKB/TrEMBL
  GT10-like_C_sf UniProtKB/TrEMBL
KEGG Report pps:100980383 UniProtKB/TrEMBL
NCBI Gene FUT11 ENTREZGENE
PANTHER ALPHA-(1,3)-FUCOSYLTRANSFERASE 11 UniProtKB/TrEMBL
  PTHR11929 UniProtKB/TrEMBL
Pfam Glyco_tran_10_N UniProtKB/TrEMBL
  Glyco_transf_10 UniProtKB/TrEMBL
PIRSF Alpha1_3FUT_met UniProtKB/TrEMBL
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/TrEMBL
UniProt A0A2R9AWC4 ENTREZGENE, UniProtKB/TrEMBL